CABP1 3599

Name: CABP1	Sequence: fasta or formatted (167aa)		NCBI GI: 13929434
Description: calcium binding protein 1 isoform 2		Referenced in: Calmodulin and Calcium
Other entries for this name: alt prot [227aa] calcium binding protein 1 isoform 1 alt prot [370aa] calcium binding protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.0 5 1 C cysteine 1.8 3 1 D aspartate 10.2 17 2 E glutamate 12.0 20 2 F phenylalanine 4.8 8 1 G glycine 8.4 14 2 H histidine 1.8 3 1 I isoleucine 5.4 9 2 K lysine 4.2 7 1 L leucine 9.6 16 2 M methionine 6.6 11 2 N asparagine 4.8 8 1 P proline 2.4 4 1 Q glutamine 1.8 3 2 R arginine 10.2 17 1 S serine 3.6 6 1 T threonine 3.0 5 1 V valine 4.8 8 1 W tryptophan 0.0 0 0 Y tyrosine 1.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium binding protein 1 isoform 2 CABP1 0.902 calcium binding protein 1 isoform 3 CABP1 0.902 calcium binding protein 1 isoform 1 CABP2 0.717 calcium binding protein 2 isoform 2 CABP2 0.679 calcium binding protein 2 isoform 1 CABP5 0.667 calcium binding protein 5 CABP4 0.575 calcium binding protein 4 CALM3 0.311 calmodulin 3 CALM2 0.311 calmodulin 2 CALM1 0.311 calmodulin 1 CALML3 0.305 calmodulin-like 3 TNNC2 0.244 fast skeletal muscle troponin C CALML5 0.225 calmodulin-like 5 TNNC1 0.219 troponin C, slow CALN1 0.206 calneuron 1 isoform 2 CALN1 0.206 calneuron 1 isoform 1 CABP7 0.197 calcium binding protein 7 CETN1 0.194 centrin 1 CETN2 0.187 caltractin CETN3 0.181 centrin 3 CALML6 0.162 calmodulin-like 6 CALML4 0.149 calmodulin-like 4 isoform 1 PPP3R1 0.137 protein phosphatase 3, regulatory subunit B, alpha is... MYL12B 0.130 myosin regulatory light chain MRCL2 isoform A [Homo... MYL12B 0.130 myosin regulatory light chain MRCL2 isoform A [Homo... MYL12B 0.130 myosin regulatory light chain MRCL2 isoform A MYL9 0.130 myosin regulatory light chain 9 isoform a MYL12A 0.130 myosin, light chain 12A, regulatory, non-sarcomeric [... LOC100292202 0.127 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.127 solute carrier family 25, member 25 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.