CABP1 35608

Name: CABP1	Sequence: fasta or formatted (370aa)		NCBI GI: 76056882
Description: calcium binding protein 1 isoform 3		Referenced in: Calmodulin and Calcium
Other entries for this name: alt prot [227aa] calcium binding protein 1 isoform 1 alt prot [167aa] calcium binding protein 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 40 6 C cysteine 1.4 5 1 D aspartate 6.5 24 2 E glutamate 7.6 28 2 F phenylalanine 3.0 11 1 G glycine 11.1 41 3 H histidine 2.2 8 1 I isoleucine 2.7 10 2 K lysine 2.4 9 1 L leucine 8.9 33 2 M methionine 3.5 13 2 N asparagine 1.6 6 1 P proline 9.7 36 4 Q glutamine 2.2 8 2 R arginine 12.4 46 2 S serine 8.6 32 2 T threonine 2.2 8 1 V valine 2.7 10 1 W tryptophan 0.0 0 0 Y tyrosine 0.5 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium binding protein 1 isoform 3 CABP1 0.394 calcium binding protein 1 isoform 2 CABP1 0.394 calcium binding protein 1 isoform 1 CABP2 0.307 calcium binding protein 2 isoform 1 CABP2 0.298 calcium binding protein 2 isoform 2 CABP5 0.290 calcium binding protein 5 CABP4 0.275 calcium binding protein 4 CALM3 0.136 calmodulin 3 CALM2 0.136 calmodulin 2 CALM1 0.136 calmodulin 1 CALML3 0.133 calmodulin-like 3 TNNC2 0.107 fast skeletal muscle troponin C CALML5 0.098 calmodulin-like 5 TNNC1 0.096 troponin C, slow CALN1 0.094 calneuron 1 isoform 1 CALN1 0.090 calneuron 1 isoform 2 CETN1 0.086 centrin 1 CABP7 0.083 calcium binding protein 7 CETN2 0.082 caltractin CETN3 0.076 centrin 3 CALML6 0.074 calmodulin-like 6 CALML4 0.068 calmodulin-like 4 isoform 1 LOC100292202 0.055 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.055 solute carrier family 25, member 25 isoform b MYL12B 0.055 myosin regulatory light chain MRCL2 isoform A [Homo... MYL12B 0.055 myosin regulatory light chain MRCL2 isoform B [Homo... MYL12B 0.055 myosin regulatory light chain MRCL2 isoform A [Homo... MYL12B 0.055 myosin regulatory light chain MRCL2 isoform A MYL9 0.055 myosin regulatory light chain 9 isoform a MYL12A 0.054 myosin, light chain 12A, regulatory, non-sarcomeric [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.