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Search of human proteins with 4507587
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507587 tumor necrosis factor receptor superfamily, member 7
precursor [Homo sapiens]
(260 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507587 tumor necrosis factor receptor superfamily, member 7 ... 572 e-163
gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens] 69 3e-12
gi|23510423 tumor necrosis factor receptor superfamily, member 6... 65 8e-11
gi|23510421 tumor necrosis factor receptor superfamily, member 6... 65 8e-11
gi|4507583 tumor necrosis factor receptor superfamily, member 6 ... 65 8e-11
gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens] 63 3e-10
gi|4507579 tumor necrosis factor receptor superfamily, member 4 ... 54 1e-07
gi|5730095 tumor necrosis factor receptor superfamily, member 9 ... 54 1e-07
gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapi... 54 1e-07
gi|4505039 lymphotoxin beta receptor [Homo sapiens] 54 1e-07
gi|23200041 tumor necrosis factor receptor superfamily, member 1... 54 2e-07
gi|23200023 tumor necrosis factor receptor superfamily, member 2... 54 2e-07
gi|23200021 tumor necrosis factor receptor superfamily, member 2... 54 2e-07
gi|89142745 tumor necrosis factor receptor superfamily, member 2... 54 2e-07
gi|4507569 tumor necrosis factor receptor superfamily, member 25... 54 2e-07
gi|14790170 tumor necrosis factor receptor superfamily, member 6... 52 4e-07
gi|4507585 tumor necrosis factor receptor superfamily, member 6b... 52 4e-07
gi|4505393 nerve growth factor receptor precursor [Homo sapiens] 52 4e-07
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 50 3e-06
gi|11140823 X-linked ectodysplasin receptor [Homo sapiens] 49 3e-06
gi|4507565 tumor necrosis factor receptor superfamily, member 11... 47 2e-05
gi|148743793 osteoprotegerin precursor [Homo sapiens] 41 0.001
gi|21264602 laminin alpha 5 [Homo sapiens] 40 0.002
gi|22547121 tumor necrosis factor receptor superfamily, member 1... 40 0.002
gi|22547108 tumor necrosis factor receptor superfamily, member 1... 39 0.003
gi|181336739 multiple EGF-like-domains 11 [Homo sapiens] 39 0.003
gi|4507483 thrombomodulin precursor [Homo sapiens] 38 0.008
gi|68348711 tumor necrosis factor receptor superfamily, member 8... 38 0.010
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 37 0.013
gi|9506545 delta-like 4 protein precursor [Homo sapiens] 37 0.023
>gi|4507587 tumor necrosis factor receptor superfamily, member 7
precursor [Homo sapiens]
Length = 260
Score = 572 bits (1473), Expect = e-163
Identities = 260/260 (100%), Positives = 260/260 (100%)
Query: 1 MARPHPWWLCVLGTLVGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAA 60
MARPHPWWLCVLGTLVGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAA
Sbjct: 1 MARPHPWWLCVLGTLVGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAA 60
Query: 61 QCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVRNCTITANAECACRNGWQCRDKECTEC 120
QCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVRNCTITANAECACRNGWQCRDKECTEC
Sbjct: 61 QCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVRNCTITANAECACRNGWQCRDKECTEC 120
Query: 121 DPLPNPSLTARSSQALSPHPQPTHLPYVSEMLEARTAGHMQTLADFRQLPARTLSTHWPP 180
DPLPNPSLTARSSQALSPHPQPTHLPYVSEMLEARTAGHMQTLADFRQLPARTLSTHWPP
Sbjct: 121 DPLPNPSLTARSSQALSPHPQPTHLPYVSEMLEARTAGHMQTLADFRQLPARTLSTHWPP 180
Query: 181 QRSLCSSDFIRILVIFSGMFLVFTLAGALFLHQRRKYRSNKGESPVEPAEPCRYSCPREE 240
QRSLCSSDFIRILVIFSGMFLVFTLAGALFLHQRRKYRSNKGESPVEPAEPCRYSCPREE
Sbjct: 181 QRSLCSSDFIRILVIFSGMFLVFTLAGALFLHQRRKYRSNKGESPVEPAEPCRYSCPREE 240
Query: 241 EGSTIPIQEDYRKPEPACSP 260
EGSTIPIQEDYRKPEPACSP
Sbjct: 241 EGSTIPIQEDYRKPEPACSP 260
>gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens]
Length = 277
Score = 69.3 bits (168), Expect = 3e-12
Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 20/260 (7%)
Query: 10 CVL-GTLVGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPG 68
CVL G L+ P +C E+ Y + CC +C+PG LV DC + + +C PC
Sbjct: 8 CVLWGCLLTAVHPEPPTACREKQYLINSQ-CCSLCQPGQKLVSDCTEFTE-TECLPCGES 65
Query: 69 VSFSPDHHTRPHCESCRHC--NSGLLV-RNCTITANAECACRNGWQCRDKECTEC----D 121
F + HC ++C N GL V + T + C C GW C + C C
Sbjct: 66 -EFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRS 124
Query: 122 PLPNPSLTARSSQALSPHPQPTHLPYVSEMLEARTAGHMQTLADFRQLPARTLSTHWPPQ 181
P + ++ +P + + S + A H T + + L + T+
Sbjct: 125 CSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTN--KT 182
Query: 182 RSLCS-SDFIRILVIFSGMF--LVFTLAGALFLHQRRKYRSNKGESPVEPAEPCRYSCPR 238
+C D +R LV+ +F L L +F+ + K +NK P + EP + P
Sbjct: 183 DVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQ--EPQEINFPD 240
Query: 239 EEEGS--TIPIQEDYRKPEP 256
+ GS P+QE +P
Sbjct: 241 DLPGSNTAAPVQETLHGCQP 260
>gi|23510423 tumor necrosis factor receptor superfamily, member 6
isoform 3 precursor [Homo sapiens]
Length = 220
Score = 64.7 bits (156), Expect = 8e-11
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 36 GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVR- 94
G+ C + C PG +DC + C PC G ++ H C CR C+ G +
Sbjct: 56 GQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEV 115
Query: 95 --NCTITANAECACRNGWQCRDKECTECDP 122
NCT T N +C C+ + C C CDP
Sbjct: 116 EINCTRTQNTKCRCKPNFFCNSTVCEHCDP 145
>gi|23510421 tumor necrosis factor receptor superfamily, member 6
isoform 2 precursor [Homo sapiens]
Length = 314
Score = 64.7 bits (156), Expect = 8e-11
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 36 GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVR- 94
G+ C + C PG +DC + C PC G ++ H C CR C+ G +
Sbjct: 56 GQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEV 115
Query: 95 --NCTITANAECACRNGWQCRDKECTECDP 122
NCT T N +C C+ + C C CDP
Sbjct: 116 EINCTRTQNTKCRCKPNFFCNSTVCEHCDP 145
>gi|4507583 tumor necrosis factor receptor superfamily, member 6
isoform 1 precursor [Homo sapiens]
Length = 335
Score = 64.7 bits (156), Expect = 8e-11
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 36 GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVR- 94
G+ C + C PG +DC + C PC G ++ H C CR C+ G +
Sbjct: 56 GQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEV 115
Query: 95 --NCTITANAECACRNGWQCRDKECTECDP 122
NCT T N +C C+ + C C CDP
Sbjct: 116 EINCTRTQNTKCRCKPNFFCNSTVCEHCDP 145
>gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens]
Length = 203
Score = 62.8 bits (151), Expect = 3e-10
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 10 CVL-GTLVGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPG 68
CVL G L+ P +C E+ Y + CC +C+PG LV DC + + +C PC
Sbjct: 8 CVLWGCLLTAVHPEPPTACREKQYLINSQ-CCSLCQPGQKLVSDCTEFTE-TECLPCGES 65
Query: 69 VSFSPDHHTRPHCESCRHC--NSGLLV-RNCTITANAECACRNGWQCRDKECTEC 120
F + HC ++C N GL V + T + C C GW C + C C
Sbjct: 66 -EFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESC 119
>gi|4507579 tumor necrosis factor receptor superfamily, member 4
precursor [Homo sapiens]
Length = 277
Score = 54.3 bits (129), Expect = 1e-07
Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 39 CCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCN--SGLLVRN- 95
CC C PG +V C + + C PC PG F D + C+ C CN SG +
Sbjct: 42 CCHECRPGNGMVSRCSRSQNTV-CRPCGPG--FYNDVVSSKPCKPCTWCNLRSGSERKQL 98
Query: 96 CTITANAECACRNGWQCRD--KECTECDPLPNPSLTARSSQALSP 138
CT T + C CR G Q D K +C P P + +QA P
Sbjct: 99 CTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKP 143
>gi|5730095 tumor necrosis factor receptor superfamily, member 9
precursor [Homo sapiens]
Length = 255
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 40 CQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVRN-CTI 98
C C GTF CD +R C PC P SFS R C+ CR C R C+
Sbjct: 28 CSNCPAGTF----CDNNRNQI-CSPCPPN-SFSSAGGQRT-CDICRQCKGVFRTRKECSS 80
Query: 99 TANAECACRNGWQCRDKECTECD 121
T+NAEC C G+ C C+ C+
Sbjct: 81 TSNAECDCTPGFHCLGAGCSMCE 103
>gi|4507575 tumor necrosis factor receptor 1 precursor [Homo
sapiens]
Length = 455
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 27 CPERHYW--AQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESC 84
CP+ Y +CC C GT+L DC + C C G + ++H R HC SC
Sbjct: 44 CPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLR-HCLSC 102
Query: 85 RHCNSGL---LVRNCTITANAECACRNG-----WQCRDKECTEC 120
C + + +CT+ + C CR W +C C
Sbjct: 103 SKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNC 146
>gi|4505039 lymphotoxin beta receptor [Homo sapiens]
Length = 435
Score = 53.9 bits (128), Expect = 1e-07
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 7 WWLCVLGTLVGLSATPAPKSCP-------------ERHYWAQGKLCCQMCEPGTFLVKDC 53
W VLG L GL A P++ P + +Y Q ++CC C PGT++ C
Sbjct: 14 WGPLVLG-LFGLLAASQPQAVPPYASENQTCRDQEKEYYEPQHRICCSRCPPGTYVSAKC 72
Query: 54 DQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGL---LVRNCTITANAECACRNGW 110
+ R C C S++ + C+ CR C+ + + CT +C C+ G
Sbjct: 73 SRIRDTV-CATCAEN-SYNEHWNYLTICQLCRPCDPVMGLEEIAPCTSKRKTQCRCQPGM 130
Query: 111 QCR--DKECTECDPL 123
C ECT C+ L
Sbjct: 131 FCAAWALECTHCELL 145
>gi|23200041 tumor necrosis factor receptor superfamily, member 14
precursor [Homo sapiens]
Length = 283
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 22 PAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHC 81
PA SC E Y G CC C PG + VK+ C+PC PG ++ + C
Sbjct: 37 PALPSCKEDEY-PVGSECCPKCSPG-YRVKEACGELTGTVCEPCPPG-TYIAHLNGLSKC 93
Query: 82 ESCRHCNSGLLVR---NCTITANAECACRNGWQCRDKECTEC 120
C+ C+ + +R NC+ T NA C C G C ++ C
Sbjct: 94 LQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVQDGDHC 135
>gi|23200023 tumor necrosis factor receptor superfamily, member 25
isoform 3 precursor [Homo sapiens]
Length = 380
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 36 GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCN---SGLL 92
G CC+ C G +L C + + C C + ++H C C+ C+ S +
Sbjct: 44 GLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVA 103
Query: 93 VRNCTITANAECACRNGW--QCRDKECTECDP 122
+ NC+ A+ C C+ GW +C+ +C P
Sbjct: 104 LENCSAVADTRCGCKPGWFVECQVSQCVSSSP 135
>gi|23200021 tumor necrosis factor receptor superfamily, member 25
isoform 1 precursor [Homo sapiens]
Length = 426
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 36 GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCN---SGLL 92
G CC+ C G +L C + + C C + ++H C C+ C+ S +
Sbjct: 44 GLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVA 103
Query: 93 VRNCTITANAECACRNGW--QCRDKECTECDP 122
+ NC+ A+ C C+ GW +C+ +C P
Sbjct: 104 LENCSAVADTRCGCKPGWFVECQVSQCVSSSP 135
>gi|89142745 tumor necrosis factor receptor superfamily, member 25
isoform 12 precursor [Homo sapiens]
Length = 181
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 36 GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCN---SGLL 92
G CC+ C G +L C + + C C + ++H C C+ C+ S +
Sbjct: 44 GLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVA 103
Query: 93 VRNCTITANAECACRNGW--QCRDKECTECDP 122
+ NC+ A+ C C+ GW +C+ +C P
Sbjct: 104 LENCSAVADTRCGCKPGWFVECQVSQCVSSSP 135
>gi|4507569 tumor necrosis factor receptor superfamily, member 25
isoform 2 precursor [Homo sapiens]
Length = 417
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 36 GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCN---SGLL 92
G CC+ C G +L C + + C C + ++H C C+ C+ S +
Sbjct: 44 GLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVA 103
Query: 93 VRNCTITANAECACRNGW--QCRDKECTECDP 122
+ NC+ A+ C C+ GW +C+ +C P
Sbjct: 104 LENCSAVADTRCGCKPGWFVECQVSQCVSSSP 135
>gi|14790170 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 52.4 bits (124), Expect = 4e-07
Identities = 47/173 (27%), Positives = 64/173 (36%), Gaps = 43/173 (24%)
Query: 9 LCVLGTLVGLSATPAPKSCPER--HYWAQG----KLCCQMCEPGTFLVKDCDQHRKAAQC 62
LC++ L L PA + E + W +L C C PGTF+ + C + C
Sbjct: 12 LCLVLALPALLPVPAVRGVAETPTYPWRDAETGERLVCAQCPPGTFVQRPC-RRDSPTTC 70
Query: 63 DPCIPGVSFSPDHHTR--PHCESCRHCN-----SGLLVRNCTITANAECACRNGWQCRDK 115
PC P H+T+ + E CR+CN R C T N C CR G+
Sbjct: 71 GPC------PPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTGFFAHAG 124
Query: 116 EC---------------------TECDPLPNPSLTA--RSSQALSPHPQPTHL 145
C T+C P P + +A SS+ PH T L
Sbjct: 125 FCLEHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTAL 177
>gi|4507585 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 52.4 bits (124), Expect = 4e-07
Identities = 47/173 (27%), Positives = 64/173 (36%), Gaps = 43/173 (24%)
Query: 9 LCVLGTLVGLSATPAPKSCPER--HYWAQG----KLCCQMCEPGTFLVKDCDQHRKAAQC 62
LC++ L L PA + E + W +L C C PGTF+ + C + C
Sbjct: 12 LCLVLALPALLPVPAVRGVAETPTYPWRDAETGERLVCAQCPPGTFVQRPC-RRDSPTTC 70
Query: 63 DPCIPGVSFSPDHHTR--PHCESCRHCN-----SGLLVRNCTITANAECACRNGWQCRDK 115
PC P H+T+ + E CR+CN R C T N C CR G+
Sbjct: 71 GPC------PPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTGFFAHAG 124
Query: 116 EC---------------------TECDPLPNPSLTA--RSSQALSPHPQPTHL 145
C T+C P P + +A SS+ PH T L
Sbjct: 125 FCLEHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTAL 177
>gi|4505393 nerve growth factor receptor precursor [Homo sapiens]
Length = 427
Score = 52.4 bits (124), Expect = 4e-07
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 35/195 (17%)
Query: 15 LVGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPD 74
L+G+S A ++CP Y G+ CC+ C G + + C ++ C+PC+ V+FS
Sbjct: 20 LLGVSLGGAKEACPTGLYTHSGE-CCKACNLGEGVAQPCGANQTV--CEPCLDSVTFSDV 76
Query: 75 HHTRPHCESCRHCNSGL--LVRNCTITANAECACRNGW---------------------- 110
C+ C C GL + C +A C C G+
Sbjct: 77 VSATEPCKPCTEC-VGLQSMSAPCVEADDAVCRCAYGYYQDETTGRCEACRVCEAGSGLV 135
Query: 111 -QCRDKECTECDPLPNPSLTARSSQALSPHPQPTHLPYVSEMLEARTAGHMQTL-ADFRQ 168
C+DK+ T C+ P+ + + ++ H P V E E + + A+ +
Sbjct: 136 FSCQDKQNTVCEECPDGTYSDEAN-----HVDPCLPCTVCEDTERQLRECTRWADAECEE 190
Query: 169 LPARTLSTHWPPQRS 183
+P R ++ PP+ S
Sbjct: 191 IPGRWITRSTPPEGS 205
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 49.7 bits (117), Expect = 3e-06
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 22 PAPKS-CPERHYWAQ-GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRP 79
P P S C R Y+ Q ++CC C PG C + CD C +++ + P
Sbjct: 34 PEPGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTV-CDSCEDS-TYTQLWNWVP 91
Query: 80 HCESC-RHCNSGLL-VRNCTITANAECACRNGWQC---RDKECTECDPL 123
C SC C+S + + CT N C CR GW C + + C C PL
Sbjct: 92 ECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPL 140
>gi|11140823 X-linked ectodysplasin receptor [Homo sapiens]
Length = 297
Score = 49.3 bits (116), Expect = 3e-06
Identities = 39/107 (36%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 27 CPERHYWAQGKLC--CQMCEPGTFLVKDCDQHRKA-AQCDPCIP-GVSFSPDHHTRPHCE 82
C E YW Q C CQ C PG L KDC A C C P S HH C
Sbjct: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCI 62
Query: 83 SCRHCNSGLLVRNCTITANAECA---------CRNGWQCRDKECTEC 120
+C N V NCT T+NA C R G +D+EC C
Sbjct: 63 TCAVINRVQKV-NCTATSNAVCGDCLPRFYRKTRIG-GLQDQECIPC 107
>gi|4507565 tumor necrosis factor receptor superfamily, member 11a
precursor [Homo sapiens]
Length = 616
Score = 46.6 bits (109), Expect = 2e-05
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 9 LCVLGTLVGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPG 68
LC L + ++ AP E+HY G+ CC CEPG ++ C + C PC P
Sbjct: 17 LCALLARLQVALQIAPPCTSEKHYEHLGR-CCNKCEPGKYMSSKCTTTSDSV-CLPCGPD 74
Query: 69 VSFSPDHHTRPHCESCRHCNSG---LLVRNCTITANAECACRNGWQ-CRDKEC----TEC 120
+ + C + C++G + V T CAC G+ +D EC TEC
Sbjct: 75 -EYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGYHWSQDCECCRRNTEC 133
Query: 121 DP 122
P
Sbjct: 134 AP 135
>gi|148743793 osteoprotegerin precursor [Homo sapiens]
Length = 401
Score = 41.2 bits (95), Expect = 0.001
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 37 KLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGL--LVR 94
+L C C PGT+L + C K C PC P ++ HT C C L + +
Sbjct: 38 QLLCDKCPPGTYLKQHCTAKWKTV-CAPC-PDHYYTDSWHTSDECLYCSPVCKELQYVKQ 95
Query: 95 NCTITANAECACRNG 109
C T N C C+ G
Sbjct: 96 ECNRTHNRVCECKEG 110
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 40.4 bits (93), Expect = 0.002
Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 20/115 (17%)
Query: 16 VGLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAA--------QCDPCIP 67
VG + P ++ +LC C P L + CD+ + CD C P
Sbjct: 564 VGFEGATCDRCAPGYFHFPLCQLCG--CSPAGTLPEGCDEAGRCLCQPEFAGPHCDRCRP 621
Query: 68 GVSFSPDHHTRPHCESCRHCNSGLLVRNCTITANAECACRNGWQCRDKECTECDP 122
G +H P+C++C G L + C A C CR G+ C EC P
Sbjct: 622 G------YHGFPNCQACTCDPRGALDQLC--GAGGLCRCRPGY--TGTACQECSP 666
Score = 37.7 bits (86), Expect = 0.010
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 16/92 (17%)
Query: 52 DCDQHRKAAQCDPCIPGVSFSPDHH-TRPH-CESCRHCNSGLLVRNCTITANAECACR-- 107
DC H C+ C+PG SP+H PH C C +C S C C CR
Sbjct: 395 DCQHHTTGVNCERCLPGFYRSPNHPLDSPHVCRRC-NCESDFTDGTCE-DLTGRCYCRPN 452
Query: 108 -NGWQCRDKECTE-------CDPLPNPSLTAR 131
+G +C C E C P P+ S R
Sbjct: 453 FSGERC--DVCAEGFTGFPSCYPTPSSSNDTR 482
Score = 37.4 bits (85), Expect = 0.013
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Query: 43 CEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESC---RHCNSGLLVRNCTIT 99
C PG+ + DC + + A C+ C G S D + P C SC S C +
Sbjct: 1873 CLPGSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAP-CVSCPCPLSVPSNNFAEGCVLR 1931
Query: 100 -ANAECACRNGWQCRDKECTECDP--LPNPSLTARSSQ 134
+C C+ G+ C C P NP + S Q
Sbjct: 1932 GGRTQCLCKPGY--AGASCERCAPGFFGNPLVLGSSCQ 1967
Score = 31.6 bits (70), Expect = 0.72
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 20/100 (20%)
Query: 43 CEPGTFLVKDCDQHRKAAQCDPCIPGV---SFSPDHHTRPHCESCRH-----------CN 88
C+P T + C +H +C+ C PG + P + TR C C C
Sbjct: 1984 CDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEACDPHSGHCLCK 2043
Query: 89 SGLLVRNCTITANAECACRNGWQCRDKEC------TECDP 122
+G+ R C CR C +EC P
Sbjct: 2044 AGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSECHP 2083
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 26 SCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCR 85
SC H A+G L C+P + C +CD C+PG + P+CE+
Sbjct: 673 SCVPCHCSAEGSLHAA-CDPRSGQCS-CRPRVTGLRCDTCVPGA------YNFPYCEAGS 724
Query: 86 HCNSGLL-VRNCTITANAECACRNGWQCRDKECTECDP 122
+GL V A C CR C C P
Sbjct: 725 CHPAGLAPVDPALPEAQVPCMCRA--HVEGPSCDRCKP 760
Score = 29.6 bits (65), Expect = 2.8
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 19/70 (27%)
Query: 32 YWAQGKLCCQMCE-PGTFLVKDCDQHRKAAQCDPCIPG-------------VSFSPDHHT 77
YW + C+ C+ PG CD H C P + G V P H+
Sbjct: 2106 YWGLPEQGCRRCQCPGG----RCDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGGPVGHS 2161
Query: 78 RPHCESCRHC 87
HCE C HC
Sbjct: 2162 I-HCEVCDHC 2170
Score = 28.5 bits (62), Expect = 6.1
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 16/74 (21%)
Query: 40 CQMCEPGTF-----LVKDC---------DQHRKAAQCDPCIPGVSFSPDHHTRPHCESCR 85
C+ C PG F L C D + + CDP H T P CE C
Sbjct: 1948 CERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICA 2007
Query: 86 --HCNSGLLVRNCT 97
+ LL NCT
Sbjct: 2008 PGFYGNALLPGNCT 2021
>gi|22547121 tumor necrosis factor receptor superfamily, member 10c
precursor [Homo sapiens]
Length = 259
Score = 40.0 bits (92), Expect = 0.002
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 62 CDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVR-NCTITANAECACRNGW---QCRDKEC 117
C+PC GV ++ + P C C C S + +CT+T + C C+ G + + C
Sbjct: 66 CNPCTEGVDYTNASNNEPSCFPCTVCKSDQKHKSSCTMTRDTVCQCKEGTFRNENSPEMC 125
Query: 118 TECDPLPN 125
+C P+
Sbjct: 126 RKCSRCPS 133
>gi|22547108 tumor necrosis factor receptor superfamily, member 10d
precursor [Homo sapiens]
Length = 386
Score = 39.3 bits (90), Expect = 0.003
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 62 CDPCIPGVSFSPDHHTRPHCESCRHCNSGLLVR-NCTITANAECACRNGWQCRDKECTE 119
C+PC GV ++ + P C C C SG + +CT T + C C G +DK E
Sbjct: 96 CNPCTEGVDYTIASNNLPSCLLCTVCKSGQTNKSSCTTTRDTVCQCEKG-SFQDKNSPE 153
>gi|181336739 multiple EGF-like-domains 11 [Homo sapiens]
Length = 1044
Score = 39.3 bits (90), Expect = 0.003
Identities = 29/100 (29%), Positives = 35/100 (35%), Gaps = 30/100 (30%)
Query: 36 GKLCCQMCEPGTF---LVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSGLL 92
G +C Q C PGTF +DC H QCD H C HC +G +
Sbjct: 255 GAVCAQPCPPGTFGQNCSQDCPCHH-GGQCD------------HVTGQC----HCTAGYM 297
Query: 93 VRNCT---------ITANAECACRNGWQCRDKE-CTECDP 122
C + C C NG QC EC+P
Sbjct: 298 GDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTTGACECEP 337
Score = 37.0 bits (84), Expect = 0.017
Identities = 37/117 (31%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 17 GLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPG----VSFS 72
G S +SCP +Y +L C C+ G DC C P G VS +
Sbjct: 384 GWSGHHCNESCPVGYYGDGCQLPCT-CQNGA----DCHSITGGCTCAPGFMGEVCAVSCA 438
Query: 73 PDHHTRPHCESCRHCNSGLLVRNCTITANAECACRNGWQCRDKECTECDPLPNPSLT 129
+ P+C S CN+G C+ + C C+ GWQ D CT LP PS T
Sbjct: 439 AGTYG-PNCSSICSCNNG---GTCS-PVDGSCTCKEGWQGLD--CT----LPCPSGT 484
>gi|4507483 thrombomodulin precursor [Homo sapiens]
Length = 575
Score = 38.1 bits (87), Expect = 0.008
Identities = 52/239 (21%), Positives = 82/239 (34%), Gaps = 41/239 (17%)
Query: 24 PKSCPERHYWAQGKLCCQMCEPGTFLVKD--------CDQHRKAAQCDP-------CIPG 68
P CP+R QG C C P LV C + QC P C+
Sbjct: 333 PSPCPQRCVNTQGGFECH-CYPNYDLVDGECVEPVDPCFRANCEYQCQPLNQTSYLCVCA 391
Query: 69 VSFSPDHHTRPHCESCRHCNSGLLVRNCTITANAECACRNGWQCRDK-ECTECDPLPNPS 127
F+P H C+ CN +C A C C G+ D CT+ D N
Sbjct: 392 EGFAPIPHEPHRCQM--FCNQTACPADCDPNTQASCECPEGYILDDGFICTDIDECENGG 449
Query: 128 LTARSSQALSPHPQPTHLPYVSEML---EARTAGHMQTLADFRQLPARTLSTHWPPQRSL 184
+ +LP E + ++ A H+ T D ++ + PP
Sbjct: 450 FCSGVCH---------NLPGTFECICGPDSALARHIGTDCDSGKVDGGDSGSGEPPPSPT 500
Query: 185 CSSDFI--RILVIFSGMFLVFTLAG--------ALFLHQRRKYRSNKGESPVEPAEPCR 233
S + ++ SG+ + ++A AL H R+K + + + + A P +
Sbjct: 501 PGSTLTPPAVGLVHSGLLIGISIASLCLVVALLALLCHLRKKQGAARAKMEYKCAAPSK 559
>gi|68348711 tumor necrosis factor receptor superfamily, member 8
isoform 1 precursor [Homo sapiens]
Length = 595
Score = 37.7 bits (86), Expect = 0.010
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 11/97 (11%)
Query: 28 PERHYWAQGKLCCQMCEPGTFLVKDCDQHRK--AAQCDPCIPGVSFSPDHHTRPHCESCR 85
P +Y + CC C G F + C Q QC+P + D R C +C
Sbjct: 33 PSHYYDKAVRRCCYRCPMGLFPTQQCPQRPTDCRKQCEP-----DYYLDEADR--CTACV 85
Query: 86 HCNSGLLVRN--CTITANAECACRNGWQCRDKECTEC 120
C+ LV C ++ C CR G C C
Sbjct: 86 TCSRDDLVEKTPCAWNSSRVCECRPGMFCSTSAVNSC 122
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 37.4 bits (85), Expect = 0.013
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 27/127 (21%)
Query: 36 GKLCCQMCEPGTF-----LVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCESCRHCNSG 90
G C + CEPG+F DCD A CDP + G+ P + C C G
Sbjct: 1414 GHFCERGCEPGSFGEGCHQRCDCD---GGAPCDP-VTGLCLCPPGRSGATCN--LDCRRG 1467
Query: 91 LLVRNCTI-----------TANAECACRNGWQCRDKECTECDPL---PNPSLTARSSQAL 136
+CT+ + +C C +G+ C E PL NPSL S+ L
Sbjct: 1468 QFGPSCTLHCDCGGGADCDPVSGQCHCVDGYM--GPTCREGGPLRLPENPSLAQGSAGTL 1525
Query: 137 SPHPQPT 143
+PT
Sbjct: 1526 PASSRPT 1532
Score = 30.8 bits (68), Expect = 1.2
Identities = 26/96 (27%), Positives = 33/96 (34%), Gaps = 21/96 (21%)
Query: 17 GLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHH 76
G T +CP+ + G C +C G + A CDP + G P
Sbjct: 1239 GFLGTDCNLTCPQGRF---GPNCTHVCGCG-----------QGAACDP-VTGTCLCPPGR 1283
Query: 77 TRPHCESCRHCNSGLLVRNCTITANAECACRNGWQC 112
CE R C C T C+CRNG C
Sbjct: 1284 AGVRCE--RGCPQNRFGVGCEHT----CSCRNGGLC 1313
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/112 (24%), Positives = 36/112 (32%), Gaps = 41/112 (36%)
Query: 17 GLSATPAPKSCPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDP------CIPGVS 70
G + CPE + + C C QH AA+CDP C+PG
Sbjct: 763 GRTGEDCEADCPEGRWGLGCQEICPAC-----------QH--AARCDPETGACLCLPGFV 809
Query: 71 ------------FSPDHHTRPHCESCRHCNSGLLVRNCTITANAECACRNGW 110
+ P TR C + HC+ A C+C GW
Sbjct: 810 GSRCQDVCPAGWYGPSCQTRCSCANDGHCH----------PATGHCSCAPGW 851
>gi|9506545 delta-like 4 protein precursor [Homo sapiens]
Length = 685
Score = 36.6 bits (83), Expect = 0.023
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 25/101 (24%)
Query: 27 CPERHYWAQGKLCCQMCEPGTFLVKDCDQHRKAAQCDP-----CIPGVSFSPDHHTRPHC 81
C + +Y G C ++C K + H C P C+PG T +C
Sbjct: 175 CSDNYY---GDNCSRLC-------KKRNDHFGHYVCQPDGNLSCLPG-------WTGEYC 217
Query: 82 ESCRHCNSGLLVRNCTITANAECACRNGWQCRDKECTECDP 122
+ C SG +N + AEC CR GWQ R C EC P
Sbjct: 218 QQ-PICLSGCHEQNGYCSKPAECLCRPGWQGR--LCNECIP 255
Score = 29.6 bits (65), Expect = 2.8
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 27/114 (23%)
Query: 24 PKSCPERHYWAQGKLCCQM-----CEPGTFLVK---DCDQHRKAAQCD----------PC 65
P C R W QG+LC + C GT CD+ CD PC
Sbjct: 236 PAECLCRPGW-QGRLCNECIPHNGCRHGTCSTPWQCTCDEGWGGLFCDQDLNYCTHHSPC 294
Query: 66 IPGVSFSPDHHTRPHCESCRHCNSGLLVRNCTITANAEC---ACRNGWQCRDKE 116
G + S C C G +C + + EC CRNG C+D+E
Sbjct: 295 KNGATCSNSGQRSYTCT----CRPGYTGVDCELELS-ECDSNPCRNGGSCKDQE 343
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,179,945
Number of Sequences: 37866
Number of extensions: 685570
Number of successful extensions: 2653
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 2452
Number of HSP's gapped (non-prelim): 290
length of query: 260
length of database: 18,247,518
effective HSP length: 100
effective length of query: 160
effective length of database: 14,460,918
effective search space: 2313746880
effective search space used: 2313746880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.