Guide to the Human Genome
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Name: MEGF11 Sequence: fasta or formatted (1044aa) NCBI GI: 181336739
Description:

multiple EGF-like-domains 11

Referenced in:

Epidermal Growth Factor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         60           2
 C cysteine           14.0        146           3
 D aspartate           4.3         45           1
 E glutamate           4.2         44           2
 F phenylalanine       2.7         28           2
 G glycine            12.1        126           2
 H histidine           4.1         43           2
 I isoleucine          2.7         28           1
 K lysine              1.9         20           1
 L leucine             5.0         52           3
 M methionine          1.4         15           2
 N asparagine          3.6         38           2
 P proline             8.0         83           2
 Q glutamine           4.3         45           2
 R arginine            3.8         40           3
 S serine              8.1         85           3
 T threonine           6.0         63           2
 V valine              3.4         35           2
 W tryptophan          1.5         16           1
 Y tyrosine            3.1         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   multiple EGF-like-domains 11 
MEGF10                0.617   multiple EGF-like-domains 10 
PEAR1                 0.364   platelet endothelial aggregation receptor 1 
MEGF6                 0.294   EGF-like-domain, multiple 3 
NOTCH4                0.122   notch4 preproprotein 
SCARF1                0.113   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.113   scavenger receptor class F, member 1 isoform 1 precu...
NOTCH3                0.112   Notch homolog 3 
NOTCH1                0.109   notch1 preproprotein 
SCARF2                0.109   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.109   scavenger receptor class F, member 2 isoform 2 [Homo...
NOTCH2                0.106   notch 2 preproprotein 
TNXB                  0.104   tenascin XB isoform 1 precursor 
TNC                   0.087   tenascin C precursor 
JAG1                  0.084   jagged 1 precursor 
JAG2                  0.081   jagged 2 isoform a precursor 
JAG2                  0.081   jagged 2 isoform b precursor 
LAMA5                 0.080   laminin alpha 5 
SNED1                 0.080   6720455I24Rik homolog 
SCARF1                0.079   scavenger receptor class F, member 1 isoform 5 prec...
LAMA2                 0.065   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.065   laminin alpha 2 subunit isoform a precursor 
EYS                   0.064   eyes shut homolog isoform 1 
LAMB2                 0.064   laminin, beta 2 precursor 
LAMB1                 0.062   laminin, beta 1 precursor 
LAMB4                 0.061   laminin, beta 4 
LAMC3                 0.058   laminin, gamma 3 precursor 
LAMA1                 0.056   laminin, alpha 1 precursor 
FBN3                  0.053   fibrillin 3 precursor 
DLL1                  0.052   delta-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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