LAMA5 12778

Name: LAMA5	Sequence: fasta or formatted (3695aa)		NCBI GI: 21264602
Description: laminin alpha 5		Referenced in: Netrins and Laminins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 339 4 C cysteine 6.0 220 2 D aspartate 4.6 169 2 E glutamate 5.2 191 2 F phenylalanine 3.4 125 2 G glycine 9.4 347 3 H histidine 2.9 108 2 I isoleucine 1.7 63 2 K lysine 1.7 63 2 L leucine 10.2 377 3 M methionine 1.1 41 2 N asparagine 2.7 98 2 P proline 7.8 287 4 Q glutamine 5.8 213 2 R arginine 7.5 278 3 S serine 6.4 236 4 T threonine 5.3 197 2 V valine 6.1 224 2 W tryptophan 0.8 31 2 Y tyrosine 2.4 88 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 laminin alpha 5 LAMA3 0.180 laminin alpha 3 subunit isoform 1 LAMA3 0.180 laminin alpha 3 subunit isoform 3 LAMA3 0.095 laminin alpha 3 subunit isoform 2 LAMA3 0.089 laminin alpha 3 subunit isoform 4 LAMA4 0.084 laminin, alpha 4 isoform 1 precursor LAMA4 0.084 laminin, alpha 4 isoform 2 precursor LAMA4 0.084 laminin, alpha 4 isoform 2 precursor LAMA1 0.063 laminin, alpha 1 precursor LAMC3 0.058 laminin, gamma 3 precursor LAMA2 0.057 laminin alpha 2 subunit isoform b precursor LAMA2 0.057 laminin alpha 2 subunit isoform a precursor LAMC1 0.049 laminin, gamma 1 precursor USH2A 0.048 usherin isoform B USH2A 0.048 usherin isoform A LAMB2 0.047 laminin, beta 2 precursor HSPG2 0.039 heparan sulfate proteoglycan 2 LAMB3 0.039 laminin, beta 3 precursor LAMB3 0.039 laminin, beta 3 precursor LAMB3 0.039 laminin, beta 3 precursor LAMC2 0.035 laminin, gamma 2 isoform b precursor LAMC2 0.035 laminin, gamma 2 isoform a precursor LAMB4 0.034 laminin, beta 4 LAMB1 0.033 laminin, beta 1 precursor NTN1 0.030 netrin 1 NTN4 0.027 netrin 4 MEGF6 0.026 EGF-like-domain, multiple 3 MEGF11 0.025 multiple EGF-like-domains 11 MEGF10 0.024 multiple EGF-like-domains 10 PEAR1 0.023 platelet endothelial aggregation receptor 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.