Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KIAA1324 Sequence: fasta or formatted (1013aa) NCBI GI: 38569482
Description:

hypothetical protein LOC57535

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         65           3
 C cysteine            5.4         55           1
 D aspartate           5.1         52           2
 E glutamate           5.0         51           2
 F phenylalanine       4.3         44           2
 G glycine             7.3         74           2
 H histidine           2.1         21           2
 I isoleucine          3.8         38           2
 K lysine              5.5         56           2
 L leucine             6.2         63           3
 M methionine          1.7         17           1
 N asparagine          4.6         47           2
 P proline             5.5         56           2
 Q glutamine           2.4         24           1
 R arginine            3.7         37           2
 S serine              9.4         95           3
 T threonine           9.5         96           3
 V valine              6.0         61           2
 W tryptophan          1.9         19           2
 Y tyrosine            4.1         42           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57535 
KIAA1324L             0.544   hypothetical protein LOC222223 isoform 1 
KIAA1324L             0.436   hypothetical protein LOC222223 isoform 2 
SVEP1                 0.017   polydom 
SCUBE3                0.014   signal peptide, CUB domain, EGF-like 3 
SCUBE1                0.012   signal peptide, CUB domain, EGF-like 1 
EPHB3                 0.010   ephrin receptor EphB3 precursor 
LAMA3                 0.009   laminin alpha 3 subunit isoform 1 
LAMA3                 0.009   laminin alpha 3 subunit isoform 4 
LAMA3                 0.009   laminin alpha 3 subunit isoform 3 
LAMA3                 0.009   laminin alpha 3 subunit isoform 2 
SCUBE2                0.009   CEGP1 protein 
CD40                  0.008   CD40 antigen isoform 2 precursor 
CD40                  0.008   CD40 antigen isoform 1 precursor 
EPHA6                 0.008   EPH receptor A6 isoform a 
LTBR                  0.008   lymphotoxin beta receptor 
LOC100290671          0.007   PREDICTED: hypothetical protein XP_002347099 
LOC100289618          0.007   PREDICTED: hypothetical protein XP_002342982 
EPHA8                 0.007   ephrin receptor EphA8 isoform 2 precursor 
EPHA8                 0.007   ephrin receptor EphA8 isoform 1 precursor 
TNFRSF6B              0.007   tumor necrosis factor receptor superfamily, member 6...
TNFRSF6B              0.007   tumor necrosis factor receptor superfamily, member 6b...
CASR                  0.007   calcium-sensing receptor 
EPHB4                 0.007   EPH receptor B4 precursor 
LOC100292811          0.007   PREDICTED: similar to proprotein convertase subtili...
EPHA1                 0.007   ephrin receptor EphA1 
TNFRSF4               0.007   tumor necrosis factor receptor superfamily, member 4 ...
LAMA2                 0.007   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.007   laminin alpha 2 subunit isoform a precursor 
SELE                  0.006   selectin E precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press