BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapiens] (461 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 955 0.0 gi|14790170 tumor necrosis factor receptor superfamily, member 6... 129 7e-30 gi|4507585 tumor necrosis factor receptor superfamily, member 6b... 129 7e-30 gi|148743793 osteoprotegerin precursor [Homo sapiens] 128 1e-29 gi|7657039 tumor necrosis factor receptor superfamily, member 21... 120 3e-27 gi|4505039 lymphotoxin beta receptor [Homo sapiens] 117 2e-26 gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens] 114 1e-25 gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens] 108 8e-24 gi|4507565 tumor necrosis factor receptor superfamily, member 11... 105 7e-23 gi|23200041 tumor necrosis factor receptor superfamily, member 1... 99 1e-20 gi|68348711 tumor necrosis factor receptor superfamily, member 8... 89 1e-17 gi|4507579 tumor necrosis factor receptor superfamily, member 4 ... 73 5e-13 gi|4505393 nerve growth factor receptor precursor [Homo sapiens] 70 5e-12 gi|5730095 tumor necrosis factor receptor superfamily, member 9 ... 62 8e-10 gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapi... 59 1e-08 gi|22547121 tumor necrosis factor receptor superfamily, member 1... 56 6e-08 gi|21361086 tumor necrosis factor receptor superfamily, member 1... 55 1e-07 gi|23510423 tumor necrosis factor receptor superfamily, member 6... 55 1e-07 gi|23510421 tumor necrosis factor receptor superfamily, member 6... 55 1e-07 gi|4507583 tumor necrosis factor receptor superfamily, member 6 ... 55 1e-07 gi|224494019 tumor necrosis factor receptor superfamily, member ... 54 3e-07 gi|224494026 tumor necrosis factor receptor superfamily, member ... 53 5e-07 gi|4507587 tumor necrosis factor receptor superfamily, member 7 ... 50 6e-06 gi|23200023 tumor necrosis factor receptor superfamily, member 2... 49 1e-05 gi|23200021 tumor necrosis factor receptor superfamily, member 2... 49 1e-05 gi|89142745 tumor necrosis factor receptor superfamily, member 2... 49 1e-05 gi|4507569 tumor necrosis factor receptor superfamily, member 25... 49 1e-05 gi|22547108 tumor necrosis factor receptor superfamily, member 1... 49 1e-05 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 48 2e-05 gi|11140823 X-linked ectodysplasin receptor [Homo sapiens] 48 2e-05 >gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapiens] Length = 461 Score = 955 bits (2468), Expect = 0.0 Identities = 461/461 (100%), Positives = 461/461 (100%) Query: 1 MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREYYDQTAQMCCSKCSPG 60 MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREYYDQTAQMCCSKCSPG Sbjct: 1 MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREYYDQTAQMCCSKCSPG 60 Query: 61 QHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTC 120 QHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTC Sbjct: 61 QHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTC 120 Query: 121 RPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICR 180 RPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICR Sbjct: 121 RPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICR 180 Query: 181 PHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEPSTAPSTS 240 PHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEPSTAPSTS Sbjct: 181 PHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEPSTAPSTS 240 Query: 241 FLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIMTQVKKKPLCLQREAKV 300 FLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIMTQVKKKPLCLQREAKV Sbjct: 241 FLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIMTQVKKKPLCLQREAKV 300 Query: 301 PHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDRRAPTRNQPQAPGVEASGAGE 360 PHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDRRAPTRNQPQAPGVEASGAGE Sbjct: 301 PHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDRRAPTRNQPQAPGVEASGAGE 360 Query: 361 ARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQASSTMGDTDSSPSESPKDEQ 420 ARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQASSTMGDTDSSPSESPKDEQ Sbjct: 361 ARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQASSTMGDTDSSPSESPKDEQ 420 Query: 421 VPFSKEECAFRSQLETPETLLGSTEEKPLPLGVPDAGMKPS 461 VPFSKEECAFRSQLETPETLLGSTEEKPLPLGVPDAGMKPS Sbjct: 421 VPFSKEECAFRSQLETPETLLGSTEEKPLPLGVPDAGMKPS 461 >gi|14790170 tumor necrosis factor receptor superfamily, member 6b [Homo sapiens] Length = 300 Score = 129 bits (323), Expect = 7e-30 Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 18/210 (8%) Query: 13 GLELWAAAHALPAQV---AFTPYAPEPGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTK 69 GL L ALPA + A A P R E ++ + C++C PG + C + Sbjct: 8 GLSLLCLVLALPALLPVPAVRGVAETPTYPWRDAETGER---LVCAQCPPGTFVQRPCRR 64 Query: 70 TSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCALS 129 S T C C YTQ WN++ C C C + E +AC NR C CR G++ Sbjct: 65 DSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTGFFAHAG 124 Query: 130 KQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICNVVA 189 C C PG GV PGT + + C+PC PGTFS ++SS++ C+PH+ C + Sbjct: 125 ------FCLEHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTALG 178 Query: 190 ----IPGNASMDAVCTSTS--PTRSMAPGA 213 +PG++S D +CTS + P + PGA Sbjct: 179 LALNVPGSSSHDTLCTSCTGFPLSTRVPGA 208 >gi|4507585 tumor necrosis factor receptor superfamily, member 6b [Homo sapiens] Length = 300 Score = 129 bits (323), Expect = 7e-30 Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 18/210 (8%) Query: 13 GLELWAAAHALPAQV---AFTPYAPEPGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTK 69 GL L ALPA + A A P R E ++ + C++C PG + C + Sbjct: 8 GLSLLCLVLALPALLPVPAVRGVAETPTYPWRDAETGER---LVCAQCPPGTFVQRPCRR 64 Query: 70 TSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCALS 129 S T C C YTQ WN++ C C C + E +AC NR C CR G++ Sbjct: 65 DSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTGFFAHAG 124 Query: 130 KQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICNVVA 189 C C PG GV PGT + + C+PC PGTFS ++SS++ C+PH+ C + Sbjct: 125 ------FCLEHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTALG 178 Query: 190 ----IPGNASMDAVCTSTS--PTRSMAPGA 213 +PG++S D +CTS + P + PGA Sbjct: 179 LALNVPGSSSHDTLCTSCTGFPLSTRVPGA 208 >gi|148743793 osteoprotegerin precursor [Homo sapiens] Length = 401 Score = 128 bits (321), Expect = 1e-29 Identities = 66/166 (39%), Positives = 81/166 (48%), Gaps = 12/166 (7%) Query: 45 YYDQTA--QMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSS 102 +YD+ Q+ C KC PG + K CT TVC C D YT W+ ECL C C Sbjct: 30 HYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKE 89 Query: 103 DQVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCK 162 Q Q C R NR+C C+ G Y + C R C PGFGV + GT + VCK Sbjct: 90 LQYVKQECNRTHNRVCECKEGRYLEI------EFCLKHRSCPPGFGVVQAGTPERNTVCK 143 Query: 163 PCAPGTFSNTTSSTDICRPHQICNVVAI----PGNASMDAVCTSTS 204 C G FSN TSS CR H C+V + GNA+ D +C+ S Sbjct: 144 RCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNICSGNS 189 >gi|7657039 tumor necrosis factor receptor superfamily, member 21 precursor [Homo sapiens] Length = 655 Score = 120 bits (301), Expect = 3e-27 Identities = 92/305 (30%), Positives = 131/305 (42%), Gaps = 39/305 (12%) Query: 52 MCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACT 111 + C KC G + CT TS VC SC T+T+ N + +C C C +E C Sbjct: 65 LTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCA 124 Query: 112 REQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSN 171 +R CTC PG + + CAP C G+GV + GTET DV CK CA GTFS+ Sbjct: 125 ALTDRECTCPPGMF------QSNATCAPHTVCPVGWGVRKKGTETEDVRCKQCARGTFSD 178 Query: 172 TTSSTDICRPHQIC---NVVAI-PGNASMDAVC---TSTSPTRSMAPGAVHLPQPVSTRS 224 SS C+ + C N+V I PG D VC S S + S +PG P+P Sbjct: 179 VPSSVMKCKAYTDCLSQNLVVIKPGTKETDNVCGTLPSFSSSTSPSPGTAIFPRP----- 233 Query: 225 QHTQPTPEPSTAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIM 284 +H + PS S +P G + S+ V L + G V Sbjct: 234 EHMETHEVPS-----STYVPKGMNSTESNSSAS--------VRPKVLSSIQEGTVPDNTS 280 Query: 285 TQVKKKPLCLQREAKVPHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDRRAPT 344 + K+ + +P+L QGP +H+L PS ++ E S++ + + P Sbjct: 281 SARGKEDV----NKTLPNLQV--VNHQQGPHHRHILKLLPSMEATGGEKSSTPI--KGPK 332 Query: 345 RNQPQ 349 R P+ Sbjct: 333 RGHPR 337 >gi|4505039 lymphotoxin beta receptor [Homo sapiens] Length = 435 Score = 117 bits (293), Expect = 2e-26 Identities = 76/215 (35%), Positives = 99/215 (46%), Gaps = 29/215 (13%) Query: 2 APVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCR--LREYYDQTAQMCCSKCSP 59 AP W L +GL AA A PYA E TCR +EYY+ ++CCS+C P Sbjct: 9 APGLAWGPLVLGLFGLLAASQ---PQAVPPYASE-NQTCRDQEKEYYEPQHRICCSRCPP 64 Query: 60 GQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQV----ETQACTREQN 115 G + C++ DTVC +C +++Y + WN++ C C D V E CT ++ Sbjct: 65 GTYVSAKCSRIRDTVCATCAENSYNEHWNYLTICQLCR---PCDPVMGLEEIAPCTSKRK 121 Query: 116 RICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVV------CKPCAPGTF 169 C C+PG +CA E C C L C PG E D V C PC G F Sbjct: 122 TQCRCQPGMFCAAWALE-CTHCELLSDCPPG-----TEAELKDEVGKGNNHCVPCKAGHF 175 Query: 170 SNTTSSTDICRPHQICN----VVAIPGNASMDAVC 200 NT+S + C+PH C V A PG A D C Sbjct: 176 QNTSSPSARCQPHTRCENQGLVEAAPGTAQSDTTC 210 >gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens] Length = 277 Score = 114 bits (286), Expect = 1e-25 Identities = 66/187 (35%), Positives = 88/187 (47%), Gaps = 14/187 (7%) Query: 30 TPYAPEPGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNW 89 T PEP + CR ++Y + CCS C PGQ CT+ ++T C C +S + WN Sbjct: 16 TAVHPEPPTACREKQYLINS--QCCSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNR 73 Query: 90 VPECLSCGSRCSSD---QVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPG 146 C C + +V+ Q T E + ICTC GW+C E C C R C PG Sbjct: 74 ETHCHQ-HKYCDPNLGLRVQ-QKGTSETDTICTCEEGWHCT---SEACESCVLHRSCSPG 128 Query: 147 FGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICN----VVAIPGNASMDAVCTS 202 FGV + T SD +C+PC G FSN +S+ + C P C VV G D VC Sbjct: 129 FGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTNKTDVVCGP 188 Query: 203 TSPTRSM 209 R++ Sbjct: 189 QDRLRAL 195 >gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens] Length = 203 Score = 108 bits (271), Expect = 8e-24 Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 10/155 (6%) Query: 30 TPYAPEPGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNW 89 T PEP + CR ++Y + CCS C PGQ CT+ ++T C C +S + WN Sbjct: 16 TAVHPEPPTACREKQYLINS--QCCSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNR 73 Query: 90 VPECLSCGSRCSSD---QVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPG 146 C C + +V+ Q T E + ICTC GW+C E C C R C PG Sbjct: 74 ETHCHQ-HKYCDPNLGLRVQ-QKGTSETDTICTCEEGWHCT---SEACESCVLHRSCSPG 128 Query: 147 FGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRP 181 FGV + T SD +C+PC G FSN +S+ + C P Sbjct: 129 FGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHP 163 Score = 36.6 bits (83), Expect = 0.049 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 143 CRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICNV-----VAIPGNASMD 197 C+PG + TE ++ C PC F +T + C H+ C+ V G + D Sbjct: 41 CQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETD 100 Query: 198 AVCT 201 +CT Sbjct: 101 TICT 104 >gi|4507565 tumor necrosis factor receptor superfamily, member 11a precursor [Homo sapiens] Length = 616 Score = 105 bits (263), Expect = 7e-23 Identities = 64/186 (34%), Positives = 84/186 (45%), Gaps = 13/186 (6%) Query: 40 CRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSR 99 C ++Y+ + CC+KC PG++ CT TSD+VC C Y WN +CL Sbjct: 34 CTSEKHYEHLGR-CCNKCEPGKYMSSKCTTTSDSVCLPCGPDEYLDSWNEEDKCL-LHKV 91 Query: 100 CSSDQ--VETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETS 157 C + + V A R C C G++ + + C C +C PG G P Sbjct: 92 CDTGKALVAVVAGNSTTPRRCACTAGYHWS----QDCECCRRNTECAPGLGAQHPLQLNK 147 Query: 158 DVVCKPCAPGTFSNTTSSTDICRPHQICNV----VAIPGNASMDAVCTSTSPTRSMAPGA 213 D VCKPC G FS+ SSTD CRP C V G DAVC+S+ P R P Sbjct: 148 DTVCKPCLAGYFSDAFSSTDKCRPWTNCTFLGKRVEHHGTEKSDAVCSSSLPARK-PPNE 206 Query: 214 VHLPQP 219 H+ P Sbjct: 207 PHVYLP 212 >gi|23200041 tumor necrosis factor receptor superfamily, member 14 precursor [Homo sapiens] Length = 283 Score = 98.6 bits (244), Expect = 1e-20 Identities = 53/146 (36%), Positives = 70/146 (47%), Gaps = 16/146 (10%) Query: 32 YAPEPGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVP 91 YAP S C+ EY CC KCSPG K C + + TVC+ C TY N + Sbjct: 35 YAPALPS-CKEDEY--PVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLS 91 Query: 92 ECLSC-------GSRCSSDQVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCR 144 +CL C G R S + C+R +N +C C PG +C + + C C Sbjct: 92 KCLQCQMCDPAMGLRASRN------CSRTENAVCGCSPGHFCIVQDGDHCAACRAYATSS 145 Query: 145 PGFGVARPGTETSDVVCKPCAPGTFS 170 PG V + GTE+ D +C+ C PGTFS Sbjct: 146 PGQRVQKGGTESQDTLCQNCPPGTFS 171 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 137 CAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICN 186 C P KC PG+ V E + VC+PC PGT+ + C Q+C+ Sbjct: 53 CCP--KCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCD 100 >gi|68348711 tumor necrosis factor receptor superfamily, member 8 isoform 1 precursor [Homo sapiens] Length = 595 Score = 88.6 bits (218), Expect = 1e-17 Identities = 67/246 (27%), Positives = 88/246 (35%), Gaps = 17/246 (6%) Query: 11 AVGLELWAAAHALPAQVAFTPYAPEPGSTCRLR--EYYDQTAQMCCSKCSPGQHAKVFCT 68 A+GL A A P F TC YYD+ + CC +C G C Sbjct: 7 ALGLLFLGALRAFPQDRPFE-------DTCHGNPSHYYDKAVRRCCYRCPMGLFPTQQCP 59 Query: 69 KTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCAL 128 + CE Y + C++C D VE C +R+C CRPG +C+ Sbjct: 60 QRPTDCRKQCEPDYYLDEADRCTACVTCSR---DDLVEKTPCAWNSSRVCECRPGMFCST 116 Query: 129 SKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICNVV 188 S C C C G V PGT + VC+P +PG S + P Sbjct: 117 SAVNSCARCFFHSVCPAGMIVKFPGTAQKNTVCEPASPGVSPACASPENCKEPSSGTIPQ 176 Query: 189 AIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEPSTAPSTS-FLLPMGP 247 A P S ST P R G L Q +++ +P PS+ L P P Sbjct: 177 AKPTPVSPATSSASTMPVR----GGTRLAQEAASKLTRAPDSPSSVGRPSSDPGLSPTQP 232 Query: 248 SPPAEG 253 P G Sbjct: 233 CPEGSG 238 Score = 55.8 bits (133), Expect = 8e-08 Identities = 81/320 (25%), Positives = 112/320 (35%), Gaps = 56/320 (17%) Query: 59 PGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRIC 118 PG C + S CE Y C+SC D VE C +R C Sbjct: 225 PGLSPTQPCPEGSGDCRKQCEPDYYLDEAGRCTACVSCSR---DDLVEKTPCAWNSSRTC 281 Query: 119 TCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDI 178 CRPG CA S C P C A T+ D+ K +TT Sbjct: 282 ECRPGMICATSATNSRARCVPYPIC-----AAETVTKPQDMAEK--------DTTFEAPP 328 Query: 179 CRPHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEPSTAPS 238 CN G A STSPT+S+ SQ ++ P P++A Sbjct: 329 LGTQPDCNPTPENGEAP-----ASTSPTQSLL-----------VDSQASKTLPIPTSA-- 370 Query: 239 TSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIMTQVKKKPLCLQREA 298 P A STG L G ++ L L+++ + ++ + C +R Sbjct: 371 ----------PVALSSTGKPVLDAGPVLFWVILVLVVVVGSSAFLLCH---RRACRKRIR 417 Query: 299 KVPHL--PADKARGTQGPEQQHLLITAPSSSSSSLESSASALDRRAPTRNQPQAPGVEA- 355 + HL P T P+ + L+ + P SS+ L S AS + A R P +E Sbjct: 418 QKLHLCYPVQ----TSQPKLE-LVDSRPRRSSTQLRSGASVTEPVAEERGLMSQPLMETC 472 Query: 356 -SGAGEARASTGSSDSSPGG 374 S S D+SP G Sbjct: 473 HSVGAAYLESLPLQDASPAG 492 >gi|4507579 tumor necrosis factor receptor superfamily, member 4 precursor [Homo sapiens] Length = 277 Score = 73.2 bits (178), Expect = 5e-13 Identities = 64/230 (27%), Positives = 86/230 (37%), Gaps = 44/230 (19%) Query: 53 CCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVP--ECLSCGSRCSSDQVETQAC 110 CC +C PG C+++ +TVC C Y + + P C C R S++ Q C Sbjct: 42 CCHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSER--KQLC 99 Query: 111 TREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFS 170 T Q+ +C CR G PL +PG V C PC PG FS Sbjct: 100 TATQDTVCRCRAG-------------TQPLDSYKPG------------VDCAPCPPGHFS 134 Query: 171 NTTSSTDICRPHQICNVVA----IPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQH 226 C+P C + P + S DA+C P + P P Q Sbjct: 135 --PGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQ-PQETQGPPARPITVQP 191 Query: 227 TQPTPEPSTAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLII 276 T+ P S PST P G L +GL++G+ LG L I Sbjct: 192 TEAWPRTSQGPSTR------PVEVPGGRAVAAILGLGLVLGL--LGPLAI 233 >gi|4505393 nerve growth factor receptor precursor [Homo sapiens] Length = 427 Score = 69.7 bits (169), Expect = 5e-12 Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 19/188 (10%) Query: 53 CCSKCSPGQHAKVFCTKTSDTVCDSCEDS-TYTQLWNWVPECLSCGSRCSSDQVETQACT 111 CC C+ G+ C + TVC+ C DS T++ + + C C + C Q + C Sbjct: 43 CCKACNLGEGVAQPCG-ANQTVCEPCLDSVTFSDVVSATEPCKPC-TECVGLQSMSAPCV 100 Query: 112 REQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSN 171 + +C C G+Y + E C R C G G+ + + VC+ C GT+S+ Sbjct: 101 EADDAVCRCAYGYY----QDETTGRCEACRVCEAGSGLVFSCQDKQNTVCEECPDGTYSD 156 Query: 172 TTSSTDICRPHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTP 231 + D C P +C D TR +P TRS T P Sbjct: 157 EANHVDPCLPCTVCE----------DTERQLRECTRWADAECEEIPGRWITRS--TPPEG 204 Query: 232 EPSTAPST 239 STAPST Sbjct: 205 SDSTAPST 212 Score = 55.1 bits (131), Expect = 1e-07 Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Query: 40 CRLREYYDQTAQMC--CSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCG 97 C Y D+T C C C G C +TVC+ C D TY+ N V CL C Sbjct: 109 CAYGYYQDETTGRCEACRVCEAGSGLVFSCQDKQNTVCEECPDGTYSDEANHVDPCLPC- 167 Query: 98 SRCSSDQVETQACTREQNRICTCRPG-WYCALSKQEGCRLCAP 139 + C + + + CTR + C PG W + EG AP Sbjct: 168 TVCEDTERQLRECTRWADAECEEIPGRWITRSTPPEGSDSTAP 210 >gi|5730095 tumor necrosis factor receptor superfamily, member 9 precursor [Homo sapiens] Length = 255 Score = 62.4 bits (150), Expect = 8e-10 Identities = 48/180 (26%), Positives = 72/180 (40%), Gaps = 26/180 (14%) Query: 54 CSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTRE 113 CS C G FC + +C C ++++ C C +C + C+ Sbjct: 28 CSNCPAG----TFCDNNRNQICSPCPPNSFSSAGGQ-RTCDIC-RQCKGVFRTRKECSST 81 Query: 114 QNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTT 173 N C C PG++C GC +C + C+ G + + G CK C GTF++ Sbjct: 82 SNAECDCTPGFHCL---GAGCSMCE--QDCKQGQELTKKG-------CKDCCFGTFND-- 127 Query: 174 SSTDICRPHQICNV----VAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQP 229 ICRP C++ V + G D VC SP ++PGA + P R P Sbjct: 128 QKRGICRPWTNCSLDGKSVLVNGTKERDVVC-GPSPA-DLSPGASSVTPPAPAREPGHSP 185 >gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapiens] Length = 455 Score = 58.5 bits (140), Expect = 1e-08 Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 20/165 (12%) Query: 38 STCRLREY-YDQTAQMCCSKCSPGQHAKVFCT-KTSDTVCDSCEDSTYTQLWNWVPECLS 95 S C +Y + Q +CC+KC G + C DT C CE ++T N + CLS Sbjct: 42 SVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS 101 Query: 96 CGSRCSSD--QVETQACTREQNRICTCRPG-----WYCALSKQEGCRLCAPLRKCRPGFG 148 C S+C + QVE +CT +++ +C CR W L + C LC Sbjct: 102 C-SKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCL-------NGT 153 Query: 149 VARPGTETSDVVCKPCAPGTF--SNTTSSTDICRPHQICNVVAIP 191 V E + VC C G F N S C+ C + +P Sbjct: 154 VHLSCQEKQNTVC-TCHAGFFLRENECVSCSNCKKSLECTKLCLP 197 Score = 49.3 bits (116), Expect = 7e-06 Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 15/122 (12%) Query: 34 PEPG--STCRLREYYDQTAQ-------MCCSKCSP--GQHAKVFCTKTSDTVCDSCEDST 82 P PG + CR E TA + CSKC GQ CT DTVC C + Sbjct: 73 PGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVC-GCRKNQ 131 Query: 83 YTQLWNW-VPECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLR 141 Y W+ + +C +C S C + V +C +QN +CTC G++ ++ C C Sbjct: 132 YRHYWSENLFQCFNC-SLCLNGTVHL-SCQEKQNTVCTCHAGFFLRENECVSCSNCKKSL 189 Query: 142 KC 143 +C Sbjct: 190 EC 191 >gi|22547121 tumor necrosis factor receptor superfamily, member 10c precursor [Homo sapiens] Length = 259 Score = 56.2 bits (134), Expect = 6e-08 Identities = 52/212 (24%), Positives = 80/212 (37%), Gaps = 25/212 (11%) Query: 75 CDSCEDST-YTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCALSKQEG 133 C+ C + YT N P C C + C SDQ +CT ++ +C C+ G + + E Sbjct: 66 CNPCTEGVDYTNASNNEPSCFPC-TVCKSDQKHKSSCTMTRDTVCQCKEGTFRNENSPEM 124 Query: 134 CRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICNVVAIPGN 193 CR C+ +C G T D+ C +N T T N Sbjct: 125 CRKCS---RCPSGEVQVSNCTSWDDI---QCVEEFGANATVETPAAEETM---------N 169 Query: 194 ASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQP-TPEPSTAPSTSFLLPMGPSPPAE 252 S + T + +PG P P + + T P TP P+ A T P P+P AE Sbjct: 170 TSPGTPAPAAEETMNTSPGT---PAPAAEETMTTSPGTPAPA-AEETMTTSPGTPAPAAE 225 Query: 253 GSTGDFALPVGLIVGVTALGLLIIGVVNCVIM 284 + G L I+G++ +++ Sbjct: 226 ET---MTTSPGTPASSHYLSCTIVGIIVLIVL 254 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 54 CSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACT 111 C+ C Q K CT T DTVC C++ T+ N C C SRC S +V+ CT Sbjct: 88 CTVCKSDQKHKSSCTMTRDTVC-QCKEGTFRN-ENSPEMCRKC-SRCPSGEVQVSNCT 142 >gi|21361086 tumor necrosis factor receptor superfamily, member 10a [Homo sapiens] Length = 468 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query: 57 CSPGQHAKVFCTKTSDTVCDSCEDST-YTQLWNWVPECLSCGSRCSSDQVETQACTREQN 115 C PG H C+ C + YT N + CL C + C SD+ E CT +N Sbjct: 132 CPPGSHRS-----EHPGACNRCTEGVGYTNASNNLFACLPC-TACKSDEEERSPCTTTRN 185 Query: 116 RICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVC 161 C C+PG + + E CR C+ R C G + T SD+ C Sbjct: 186 TACQCKPGTFRNDNSAEMCRKCS--RGCPRGMVKVKDCTPWSDIEC 229 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 54 CSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACT 111 C+ C + + CT T +T C C+ T+ N C C C V+ + CT Sbjct: 167 CTACKSDEEERSPCTTTRNTAC-QCKPGTFRN-DNSAEMCRKCSRGCPRGMVKVKDCT 222 >gi|23510423 tumor necrosis factor receptor superfamily, member 6 isoform 3 precursor [Homo sapiens] Length = 220 Score = 55.1 bits (131), Expect = 1e-07 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 8/115 (6%) Query: 51 QMCCSKCSPGQHAKVFCTKTSDTV-CDSCEDST-YTQLWNWVPECLSCGSRCSSDQVETQ 108 Q C C PG+ CT D C C++ YT ++ +C C +E + Sbjct: 57 QFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVE 116 Query: 109 A-CTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCK 162 CTR QN C C+P ++C C C P KC G+ + T TS+ CK Sbjct: 117 INCTRTQNTKCRCKPNFFC---NSTVCEHCDPCTKCE--HGIIKECTLTSNTKCK 166 >gi|23510421 tumor necrosis factor receptor superfamily, member 6 isoform 2 precursor [Homo sapiens] Length = 314 Score = 55.1 bits (131), Expect = 1e-07 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 8/115 (6%) Query: 51 QMCCSKCSPGQHAKVFCTKTSDTV-CDSCEDST-YTQLWNWVPECLSCGSRCSSDQVETQ 108 Q C C PG+ CT D C C++ YT ++ +C C +E + Sbjct: 57 QFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVE 116 Query: 109 A-CTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCK 162 CTR QN C C+P ++C C C P KC G+ + T TS+ CK Sbjct: 117 INCTRTQNTKCRCKPNFFC---NSTVCEHCDPCTKCE--HGIIKECTLTSNTKCK 166 >gi|4507583 tumor necrosis factor receptor superfamily, member 6 isoform 1 precursor [Homo sapiens] Length = 335 Score = 55.1 bits (131), Expect = 1e-07 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 8/115 (6%) Query: 51 QMCCSKCSPGQHAKVFCTKTSDTV-CDSCEDST-YTQLWNWVPECLSCGSRCSSDQVETQ 108 Q C C PG+ CT D C C++ YT ++ +C C +E + Sbjct: 57 QFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVE 116 Query: 109 A-CTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCK 162 CTR QN C C+P ++C C C P KC G+ + T TS+ CK Sbjct: 117 INCTRTQNTKCRCKPNFFC---NSTVCEHCDPCTKCE--HGIIKECTLTSNTKCK 166 >gi|224494019 tumor necrosis factor receptor superfamily, member 10b isoform 1 precursor [Homo sapiens] Length = 440 Score = 53.9 bits (128), Expect = 3e-07 Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 17/117 (14%) Query: 57 CSPGQHAKVFCTKTSDTVCDSCE-DSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQN 115 C PG H C SC+ Y+ WN + CL C +RC S +VE CT +N Sbjct: 81 CPPGHHIS-----EDGRDCISCKYGQDYSTHWNDLLFCLRC-TRCDSGEVELSPCTTTRN 134 Query: 116 RICTCRPGWYCALSKQEGCRLCAPLRKCRPGF--GVARPG--TETSDVVCKPCAPGT 168 +C C G + E C RKCR G G+ + G T SD+ C GT Sbjct: 135 TVCQCEEGTFREEDSPEMC------RKCRTGCPRGMVKVGDCTPWSDIECVHKESGT 185 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 54 CSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPE-CLSCGSRCSSDQVETQACT 111 C++C G+ CT T +TVC CE+ T+ + PE C C + C V+ CT Sbjct: 116 CTRCDSGEVELSPCTTTRNTVC-QCEEGTFRE--EDSPEMCRKCRTGCPRGMVKVGDCT 171 >gi|224494026 tumor necrosis factor receptor superfamily, member 10b isoform 2 precursor [Homo sapiens] Length = 411 Score = 53.1 bits (126), Expect = 5e-07 Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 17/110 (15%) Query: 57 CSPGQHAKVFCTKTSDTVCDSCE-DSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQN 115 C PG H C SC+ Y+ WN + CL C +RC S +VE CT +N Sbjct: 81 CPPGHHIS-----EDGRDCISCKYGQDYSTHWNDLLFCLRC-TRCDSGEVELSPCTTTRN 134 Query: 116 RICTCRPGWYCALSKQEGCRLCAPLRKCRPGF--GVARPG--TETSDVVC 161 +C C G + E C RKCR G G+ + G T SD+ C Sbjct: 135 TVCQCEEGTFREEDSPEMC------RKCRTGCPRGMVKVGDCTPWSDIEC 178 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 54 CSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPE-CLSCGSRCSSDQVETQACT 111 C++C G+ CT T +TVC CE+ T+ + PE C C + C V+ CT Sbjct: 116 CTRCDSGEVELSPCTTTRNTVC-QCEEGTFRE--EDSPEMCRKCRTGCPRGMVKVGDCT 171 >gi|4507587 tumor necrosis factor receptor superfamily, member 7 precursor [Homo sapiens] Length = 260 Score = 49.7 bits (117), Expect = 6e-06 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 9/109 (8%) Query: 34 PEPGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTV-CDSCEDS-TYTQLWNWVP 91 P P S C R Y+ Q ++CC C PG C + CD C +++ + P Sbjct: 22 PAPKS-CPERHYWAQ-GKLCCQMCEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRP 79 Query: 92 ECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPL 140 C SC C+S + + CT N C CR GW C + + C C PL Sbjct: 80 HCESC-RHCNSGLL-VRNCTITANAECACRNGWQC---RDKECTECDPL 123 >gi|23200023 tumor necrosis factor receptor superfamily, member 25 isoform 3 precursor [Homo sapiens] Length = 380 Score = 48.9 bits (115), Expect = 1e-05 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 11/137 (8%) Query: 44 EYYDQTAQMCCSKCSPGQHAKVFCTKT-SDTVCDSCEDSTYTQLWNW----VPECLSCGS 98 +++ + CC C G + K CT+ ++ C C T+ N C +C Sbjct: 38 DFHKKIGLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDE 97 Query: 99 RCSSDQVETQACTREQNRICTCRPGWY--CALSK--QEGCRLCAPLRKCRPGFGVARPGT 154 + S QV + C+ + C C+PGW+ C +S+ C P C R Sbjct: 98 QAS--QVALENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLC 155 Query: 155 ETSDVVCKPCAPGTFSN 171 D C C PG + + Sbjct: 156 SRRDTDCGTCLPGFYEH 172 >gi|23200021 tumor necrosis factor receptor superfamily, member 25 isoform 1 precursor [Homo sapiens] Length = 426 Score = 48.9 bits (115), Expect = 1e-05 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 11/137 (8%) Query: 44 EYYDQTAQMCCSKCSPGQHAKVFCTKT-SDTVCDSCEDSTYTQLWNW----VPECLSCGS 98 +++ + CC C G + K CT+ ++ C C T+ N C +C Sbjct: 38 DFHKKIGLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDE 97 Query: 99 RCSSDQVETQACTREQNRICTCRPGWY--CALSK--QEGCRLCAPLRKCRPGFGVARPGT 154 + S QV + C+ + C C+PGW+ C +S+ C P C R Sbjct: 98 QAS--QVALENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLC 155 Query: 155 ETSDVVCKPCAPGTFSN 171 D C C PG + + Sbjct: 156 SRRDTDCGTCLPGFYEH 172 >gi|89142745 tumor necrosis factor receptor superfamily, member 25 isoform 12 precursor [Homo sapiens] Length = 181 Score = 48.9 bits (115), Expect = 1e-05 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 11/137 (8%) Query: 44 EYYDQTAQMCCSKCSPGQHAKVFCTKT-SDTVCDSCEDSTYTQLWNW----VPECLSCGS 98 +++ + CC C G + K CT+ ++ C C T+ N C +C Sbjct: 38 DFHKKIGLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDE 97 Query: 99 RCSSDQVETQACTREQNRICTCRPGWY--CALSK--QEGCRLCAPLRKCRPGFGVARPGT 154 + S QV + C+ + C C+PGW+ C +S+ C P C R Sbjct: 98 QAS--QVALENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLC 155 Query: 155 ETSDVVCKPCAPGTFSN 171 D C C PG + + Sbjct: 156 SRRDTDCGTCLPGFYEH 172 >gi|4507569 tumor necrosis factor receptor superfamily, member 25 isoform 2 precursor [Homo sapiens] Length = 417 Score = 48.9 bits (115), Expect = 1e-05 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 11/137 (8%) Query: 44 EYYDQTAQMCCSKCSPGQHAKVFCTKT-SDTVCDSCEDSTYTQLWNW----VPECLSCGS 98 +++ + CC C G + K CT+ ++ C C T+ N C +C Sbjct: 38 DFHKKIGLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDE 97 Query: 99 RCSSDQVETQACTREQNRICTCRPGWY--CALSK--QEGCRLCAPLRKCRPGFGVARPGT 154 + S QV + C+ + C C+PGW+ C +S+ C P C R Sbjct: 98 QAS--QVALENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLC 155 Query: 155 ETSDVVCKPCAPGTFSN 171 D C C PG + + Sbjct: 156 SRRDTDCGTCLPGFYEH 172 >gi|22547108 tumor necrosis factor receptor superfamily, member 10d precursor [Homo sapiens] Length = 386 Score = 48.5 bits (114), Expect = 1e-05 Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 9/108 (8%) Query: 56 KCSPGQHAKVFCTKTSDTVCDSCEDST-YTQLWNWVPECLSCGSRCSSDQVETQACTREQ 114 +C G H + C+ C + YT N +P CL C + C S Q +CT + Sbjct: 82 ECPAGSHRSEYTG-----ACNPCTEGVDYTIASNNLPSCLLC-TVCKSGQTNKSSCTTTR 135 Query: 115 NRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCK 162 + +C C G + + E CR C C G T SD+ CK Sbjct: 136 DTVCQCEKGSFQDKNSPEMCRTCR--TGCPRGMVKVSNCTPRSDIKCK 181 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 52 MCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACT 111 + C+ C GQ K CT T DTVC CE ++ Q N C +C + C V+ CT Sbjct: 116 LLCTVCKSGQTNKSSCTTTRDTVC-QCEKGSF-QDKNSPEMCRTCRTGCPRGMVKVSNCT 173 Query: 112 REQNRIC 118 + C Sbjct: 174 PRSDIKC 180 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 47.8 bits (112), Expect = 2e-05 Identities = 38/151 (25%), Positives = 58/151 (38%) Query: 306 DKARGTQGPEQQHLLITAPSSSSSSLESSASALDRRAPTRNQPQAPGVEASGAGEARAST 365 DKA+ Q ++ ++ SS SSS SS+S+ + G G G S Sbjct: 2545 DKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSA 2604 Query: 366 GSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQASSTMGDTDSSPSESPKDEQVPFSK 425 SS ++ + + + + SSS SS SS +SS+ + SS S S S Sbjct: 2605 ASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2664 Query: 426 EECAFRSQLETPETLLGSTEEKPLPLGVPDA 456 + S + + E P P P A Sbjct: 2665 SSSSSSSTTDEDSSCSSDDEAAPAPTAGPSA 2695 Score = 37.7 bits (86), Expect = 0.022 Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 23/117 (19%) Query: 323 APSSSSSSLESSASALDRRAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVT 382 +P+SSSSS SS+S+ + + + +S + + +S+ SS SS Sbjct: 2611 SPASSSSSSSSSSSS------SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------- 2653 Query: 383 CIVNVCSSSDHSSQCSSQASSTMGDTDSSPSESPKDEQVPFSKEECAFRSQLETPET 439 SSS SS SS +SS+ TD S S DE P + ++ L T T Sbjct: 2654 ------SSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKAT 2704 Score = 30.0 bits (66), Expect = 4.6 Identities = 56/245 (22%), Positives = 89/245 (36%), Gaps = 40/245 (16%) Query: 192 GNASMDAVCTSTSPTRSMAPGAVHLP-QPVSTRSQHTQPTP---EPSTAPSTSFLLPMGP 247 GN + + T + S PG+ P +PV R++ + P +PS AP P P Sbjct: 2351 GNPTDEVPSTPLALEPSSTPGSKKSPPEPVDKRAKAPKARPAPPQPSPAPPAFTSCP-AP 2409 Query: 248 SPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIMTQVKKKPLCLQREAKVPHLPADK 307 P AE +L ++ + A + KK + AK P P ++ Sbjct: 2410 EPFAELPAPATSLAPAPLITMPAT------------RPKPKKARAAEESGAKGPRRPGEE 2457 Query: 308 AR--------GTQGPEQQH-----LLITAPSSSSSSLESSASALDRRAPTR--NQPQAPG 352 A G P+ + LL P + S +L P ++P+AP Sbjct: 2458 AELLVKLDHEGVTSPKSKKAKEALLLREDPGAGGWQEPKSLLSLGSYPPAAGSSEPKAPW 2517 Query: 353 VEAS--------GAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSSQASST 404 +A+ G G +G+ S Q + SSS SS SS +SS+ Sbjct: 2518 PKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSS 2577 Query: 405 MGDTD 409 +T+ Sbjct: 2578 GSETE 2582 >gi|11140823 X-linked ectodysplasin receptor [Homo sapiens] Length = 297 Score = 47.8 bits (112), Expect = 2e-05 Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 24/131 (18%) Query: 40 CRLREYYDQTAQ-MCCSKCSPGQHAKVFCT--KTSDTVCDSCEDSTYTQLWNWVPECLSC 96 C+ EY+DQ + + C +C PGQ C + D C +C Y W C SC Sbjct: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGH-HRCQSC 61 Query: 97 GSRCSSDQVETQACTREQNRIC-TCRPGWY-----CALSKQEGCRLCAPLRKCRPGFGVA 150 + ++V+ CT N +C C P +Y L QE C P K P Sbjct: 62 ITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQE----CIPCTKQTP----- 112 Query: 151 RPGTETSDVVC 161 TS+V C Sbjct: 113 -----TSEVQC 118 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.127 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,696,913 Number of Sequences: 37866 Number of extensions: 1268429 Number of successful extensions: 7929 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 339 Number of HSP's that attempted gapping in prelim test: 6548 Number of HSP's gapped (non-prelim): 1514 length of query: 461 length of database: 18,247,518 effective HSP length: 106 effective length of query: 355 effective length of database: 14,233,722 effective search space: 5052971310 effective search space used: 5052971310 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.