SPAST 27585

Name: SPAST	Sequence: fasta or formatted (584aa)		NCBI GI: 40806170
Description: spastin isoform 2		Referenced in: Cytoskeleton
Other entries for this name: alt prot [616aa] spastin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 61 2 C cysteine 0.9 5 1 D aspartate 3.9 23 2 E glutamate 6.3 37 2 F phenylalanine 3.6 21 2 G glycine 7.5 44 2 H histidine 1.4 8 2 I isoleucine 3.6 21 2 K lysine 7.4 43 3 L leucine 10.8 63 4 M methionine 2.2 13 2 N asparagine 3.8 22 1 P proline 7.4 43 4 Q glutamine 3.4 20 1 R arginine 7.0 41 2 S serine 7.4 43 2 T threonine 5.1 30 2 V valine 5.7 33 1 W tryptophan 0.5 3 1 Y tyrosine 1.7 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spastin isoform 2 SPAST 0.985 spastin isoform 1 FIGNL1 0.276 fidgetin-like 1 FIGNL1 0.276 fidgetin-like 1 FIGN 0.194 fidgetin KATNA1 0.194 katanin p60 subunit A 1 KATNAL1 0.191 katanin p60 subunit A-like 1 KATNAL1 0.191 katanin p60 subunit A-like 1 VPS4B 0.187 vacuolar protein sorting factor 4B VPS4A 0.179 vacuolar protein sorting factor 4A KATNAL2 0.169 katanin p60 subunit A-like 2 ATAD1 0.148 ATPase family, AAA domain containing 1 FIGNL2 0.138 fidgetin-like 2 SPATA5 0.136 spermatogenesis associated 5 VCP 0.118 valosin-containing protein NVL 0.110 nuclear VCP-like isoform 2 NVL 0.110 nuclear VCP-like isoform 1 PSMC5 0.107 proteasome 26S ATPase subunit 5 PSMC6 0.106 proteasome 26S ATPase subunit 6 PSMC1 0.104 proteasome 26S ATPase subunit 1 PSMC3 0.104 proteasome 26S ATPase subunit 3 ATAD2B 0.101 ATPase family, AAA domain containing 2B ATAD2 0.099 ATPase family, AAA domain containing 2 LOC652826 0.099 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.099 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.099 proteasome 26S ATPase subunit 4 isoform 1 PEX6 0.098 peroxisomal biogenesis factor 6 SPATA5L1 0.095 spermatogenesis associated 5-like 1 PEX1 0.095 peroxin1 AFG3L2 0.094 AFG3 ATPase family gene 3-like 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.