NVL 30054

Name: NVL	Sequence: fasta or formatted (750aa)		NCBI GI: 45643125
Description: nuclear VCP-like isoform 2		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt prot [856aa] nuclear VCP-like isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 61 2 C cysteine 2.3 17 1 D aspartate 6.4 48 2 E glutamate 8.1 61 2 F phenylalanine 2.9 22 2 G glycine 6.1 46 2 H histidine 1.5 11 2 I isoleucine 5.1 38 2 K lysine 7.1 53 2 L leucine 11.1 83 2 M methionine 2.7 20 1 N asparagine 3.5 26 2 P proline 6.1 46 3 Q glutamine 4.1 31 2 R arginine 6.5 49 2 S serine 6.7 50 2 T threonine 4.3 32 2 V valine 6.4 48 2 W tryptophan 0.3 2 1 Y tyrosine 0.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear VCP-like isoform 2 NVL 1.000 nuclear VCP-like isoform 1 VCP 0.309 valosin-containing protein SPATA5 0.290 spermatogenesis associated 5 SPATA5L1 0.232 spermatogenesis associated 5-like 1 PEX6 0.182 peroxisomal biogenesis factor 6 PEX1 0.143 peroxin1 LOC652826 0.110 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.110 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.110 proteasome 26S ATPase subunit 4 isoform 1 AFG3L2 0.105 AFG3 ATPase family gene 3-like 2 PSMC6 0.105 proteasome 26S ATPase subunit 6 PSMC2 0.104 proteasome 26S ATPase subunit 2 ATAD2 0.102 ATPase family, AAA domain containing 2 PSMC3 0.101 proteasome 26S ATPase subunit 3 KATNAL1 0.100 katanin p60 subunit A-like 1 KATNAL1 0.100 katanin p60 subunit A-like 1 PSMC1 0.100 proteasome 26S ATPase subunit 1 SPG7 0.099 spastic paraplegia 7 isoform 1 ATAD2B 0.099 ATPase family, AAA domain containing 2B PSMC5 0.098 proteasome 26S ATPase subunit 5 KATNA1 0.092 katanin p60 subunit A 1 YME1L1 0.089 YME1-like 1 isoform 1 YME1L1 0.089 YME1-like 1 isoform 3 FIGNL1 0.089 fidgetin-like 1 FIGNL1 0.089 fidgetin-like 1 VPS4B 0.086 vacuolar protein sorting factor 4B SPAST 0.085 spastin isoform 2 SPAST 0.085 spastin isoform 1 ATAD1 0.084 ATPase family, AAA domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.