AFG3L2 33467

Name: AFG3L2	Sequence: fasta or formatted (797aa)		NCBI GI: 5802970
Description: AFG3 ATPase family gene 3-like 2		Referenced in: Metalloproteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 56 2 C cysteine 1.0 8 1 D aspartate 5.4 43 2 E glutamate 7.5 60 2 F phenylalanine 4.9 39 2 G glycine 10.4 83 8 H histidine 1.0 8 1 I isoleucine 4.8 38 2 K lysine 7.8 62 2 L leucine 10.2 81 4 M methionine 1.8 14 1 N asparagine 3.4 27 2 P proline 5.0 40 2 Q glutamine 3.5 28 2 R arginine 6.4 51 2 S serine 4.1 33 2 T threonine 5.4 43 3 V valine 6.6 53 2 W tryptophan 1.4 11 2 Y tyrosine 2.4 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AFG3 ATPase family gene 3-like 2 SPG7 0.315 spastic paraplegia 7 isoform 1 YME1L1 0.208 YME1-like 1 isoform 1 YME1L1 0.208 YME1-like 1 isoform 3 SPG7 0.122 spastic paraplegia 7 isoform 2 PSMC5 0.119 proteasome 26S ATPase subunit 5 PSMC2 0.117 proteasome 26S ATPase subunit 2 VCP 0.110 valosin-containing protein PSMC1 0.109 proteasome 26S ATPase subunit 1 PSMC6 0.107 proteasome 26S ATPase subunit 6 PSMC3 0.103 proteasome 26S ATPase subunit 3 LOC652826 0.102 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.102 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.102 proteasome 26S ATPase subunit 4 isoform 1 SPATA5 0.099 spermatogenesis associated 5 NVL 0.097 nuclear VCP-like isoform 2 NVL 0.097 nuclear VCP-like isoform 1 PEX6 0.093 peroxisomal biogenesis factor 6 SPATA5L1 0.089 spermatogenesis associated 5-like 1 PEX1 0.080 peroxin1 LOC345645 0.080 PREDICTED: similar to hCG2002932 LOC345645 0.080 PREDICTED: similar to hCG2002932 LOC345645 0.080 PREDICTED: hypothetical protein LOC345645 ATAD2 0.073 ATPase family, AAA domain containing 2 KATNAL1 0.073 katanin p60 subunit A-like 1 KATNAL1 0.073 katanin p60 subunit A-like 1 KATNA1 0.069 katanin p60 subunit A 1 ATAD2B 0.068 ATPase family, AAA domain containing 2B SPAST 0.067 spastin isoform 2 SPAST 0.067 spastin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.