NVL 30053

Name: NVL	Sequence: fasta or formatted (856aa)		NCBI GI: 45643123
Description: nuclear VCP-like isoform 1		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt prot [750aa] nuclear VCP-like isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 66 2 C cysteine 2.1 18 1 D aspartate 6.7 57 3 E glutamate 8.3 71 2 F phenylalanine 2.9 25 2 G glycine 6.0 51 2 H histidine 1.4 12 2 I isoleucine 5.1 44 2 K lysine 7.4 63 2 L leucine 10.6 91 2 M methionine 2.5 21 1 N asparagine 3.6 31 2 P proline 5.6 48 3 Q glutamine 4.2 36 2 R arginine 6.8 58 2 S serine 7.0 60 2 T threonine 4.1 35 2 V valine 6.4 55 2 W tryptophan 0.2 2 1 Y tyrosine 1.4 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear VCP-like isoform 1 NVL 0.875 nuclear VCP-like isoform 2 VCP 0.270 valosin-containing protein SPATA5 0.254 spermatogenesis associated 5 SPATA5L1 0.203 spermatogenesis associated 5-like 1 PEX6 0.159 peroxisomal biogenesis factor 6 PEX1 0.125 peroxin1 LOC652826 0.096 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.096 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.096 proteasome 26S ATPase subunit 4 isoform 1 AFG3L2 0.092 AFG3 ATPase family gene 3-like 2 PSMC6 0.092 proteasome 26S ATPase subunit 6 ATAD2 0.091 ATPase family, AAA domain containing 2 PSMC2 0.091 proteasome 26S ATPase subunit 2 PSMC3 0.088 proteasome 26S ATPase subunit 3 KATNAL1 0.087 katanin p60 subunit A-like 1 KATNAL1 0.087 katanin p60 subunit A-like 1 PSMC1 0.087 proteasome 26S ATPase subunit 1 SPG7 0.087 spastic paraplegia 7 isoform 1 ATAD2B 0.087 ATPase family, AAA domain containing 2B PSMC5 0.085 proteasome 26S ATPase subunit 5 KATNA1 0.081 katanin p60 subunit A 1 YME1L1 0.078 YME1-like 1 isoform 1 YME1L1 0.078 YME1-like 1 isoform 3 FIGNL1 0.078 fidgetin-like 1 FIGNL1 0.078 fidgetin-like 1 VPS4B 0.075 vacuolar protein sorting factor 4B SPAST 0.075 spastin isoform 2 SPAST 0.075 spastin isoform 1 ATAD1 0.073 ATPase family, AAA domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.