KATNA1 33723

Name: KATNA1	Sequence: fasta or formatted (491aa)		NCBI GI: 5901990
Description: katanin p60 subunit A 1		Referenced in: Cytoskeleton
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 35 2 C cysteine 1.0 5 1 D aspartate 5.9 29 2 E glutamate 9.6 47 2 F phenylalanine 2.6 13 2 G glycine 4.7 23 2 H histidine 1.4 7 1 I isoleucine 4.3 21 2 K lysine 7.7 38 2 L leucine 8.4 41 2 M methionine 4.1 20 1 N asparagine 3.7 18 1 P proline 4.9 24 2 Q glutamine 2.9 14 2 R arginine 7.3 36 3 S serine 8.4 41 3 T threonine 4.7 23 2 V valine 6.9 34 2 W tryptophan 1.6 8 1 Y tyrosine 2.9 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 katanin p60 subunit A 1 KATNAL1 0.643 katanin p60 subunit A-like 1 KATNAL1 0.643 katanin p60 subunit A-like 1 KATNAL2 0.263 katanin p60 subunit A-like 2 FIGNL1 0.239 fidgetin-like 1 FIGNL1 0.239 fidgetin-like 1 VPS4A 0.234 vacuolar protein sorting factor 4A SPAST 0.232 spastin isoform 1 SPAST 0.230 spastin isoform 2 VPS4B 0.229 vacuolar protein sorting factor 4B ATAD1 0.172 ATPase family, AAA domain containing 1 VCP 0.170 valosin-containing protein FIGN 0.169 fidgetin SPATA5 0.155 spermatogenesis associated 5 PSMC5 0.150 proteasome 26S ATPase subunit 5 SPATA5L1 0.148 spermatogenesis associated 5-like 1 PSMC6 0.145 proteasome 26S ATPase subunit 6 PSMC1 0.143 proteasome 26S ATPase subunit 1 PEX6 0.140 peroxisomal biogenesis factor 6 NVL 0.140 nuclear VCP-like isoform 2 NVL 0.140 nuclear VCP-like isoform 1 ATAD2B 0.138 ATPase family, AAA domain containing 2B PSMC3 0.136 proteasome 26S ATPase subunit 3 ATAD2 0.135 ATPase family, AAA domain containing 2 PSMC2 0.128 proteasome 26S ATPase subunit 2 PEX1 0.128 peroxin1 YME1L1 0.126 YME1-like 1 isoform 1 YME1L1 0.126 YME1-like 1 isoform 3 LOC652826 0.125 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.125 proteasome 26S ATPase subunit 4 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.