VCP 33875

Name: VCP	Sequence: fasta or formatted (806aa)		NCBI GI: 6005942
Description: valosin-containing protein		Referenced in: Cytoskeleton ER, Golgi, and the Secretory Pathway Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 65 2 C cysteine 1.5 12 1 D aspartate 7.7 62 3 E glutamate 8.4 68 3 F phenylalanine 3.8 31 3 G glycine 7.8 63 3 H histidine 1.2 10 1 I isoleucine 7.3 59 2 K lysine 5.8 47 2 L leucine 8.6 69 2 M methionine 2.5 20 1 N asparagine 4.0 32 2 P proline 5.3 43 2 Q glutamine 3.2 26 2 R arginine 7.2 58 2 S serine 5.0 40 1 T threonine 4.0 32 1 V valine 6.6 53 2 W tryptophan 0.4 3 1 Y tyrosine 1.6 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 valosin-containing protein SPATA5 0.327 spermatogenesis associated 5 NVL 0.285 nuclear VCP-like isoform 2 NVL 0.285 nuclear VCP-like isoform 1 SPATA5L1 0.254 spermatogenesis associated 5-like 1 PEX6 0.173 peroxisomal biogenesis factor 6 PEX1 0.158 peroxin1 ATAD2 0.126 ATPase family, AAA domain containing 2 ATAD2B 0.124 ATPase family, AAA domain containing 2B PSMC1 0.121 proteasome 26S ATPase subunit 1 PSMC2 0.116 proteasome 26S ATPase subunit 2 PSMC5 0.112 proteasome 26S ATPase subunit 5 PSMC6 0.112 proteasome 26S ATPase subunit 6 AFG3L2 0.111 AFG3 ATPase family gene 3-like 2 PSMC3 0.109 proteasome 26S ATPase subunit 3 LOC652826 0.108 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.108 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.108 proteasome 26S ATPase subunit 4 isoform 1 NSF 0.104 vesicle-fusing ATPase SPG7 0.104 spastic paraplegia 7 isoform 1 KATNAL1 0.104 katanin p60 subunit A-like 1 KATNAL1 0.104 katanin p60 subunit A-like 1 KATNA1 0.103 katanin p60 subunit A 1 YME1L1 0.097 YME1-like 1 isoform 1 YME1L1 0.097 YME1-like 1 isoform 3 FIGNL1 0.091 fidgetin-like 1 FIGNL1 0.091 fidgetin-like 1 VPS4A 0.088 vacuolar protein sorting factor 4A ATAD1 0.086 ATPase family, AAA domain containing 1 LOC728806 0.086 PREDICTED: similar to N-ethylmaleimide-sensitive fa... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.