PSMC5 23892

Name: PSMC5	Sequence: fasta or formatted (406aa)		NCBI GI: 24497435
Description: proteasome 26S ATPase subunit 5		Referenced in: Proteasome Thyroid and Thyroid Hormone Receptor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 25 1 C cysteine 0.7 3 1 D aspartate 5.4 22 1 E glutamate 9.4 38 2 F phenylalanine 2.2 9 1 G glycine 7.1 29 2 H histidine 2.0 8 2 I isoleucine 6.7 27 2 K lysine 8.1 33 3 L leucine 11.1 45 2 M methionine 4.2 17 2 N asparagine 3.9 16 1 P proline 4.2 17 3 Q glutamine 3.9 16 1 R arginine 6.7 27 2 S serine 4.9 20 2 T threonine 3.2 13 1 V valine 8.1 33 2 W tryptophan 0.2 1 1 Y tyrosine 1.7 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S ATPase subunit 5 PSMC2 0.420 proteasome 26S ATPase subunit 2 PSMC1 0.419 proteasome 26S ATPase subunit 1 PSMC6 0.412 proteasome 26S ATPase subunit 6 PSMC3 0.381 proteasome 26S ATPase subunit 3 LOC652826 0.379 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.379 proteasome 26S ATPase subunit 4 isoform 1 PSMC4 0.372 proteasome 26S ATPase subunit 4 isoform 2 LOC345645 0.334 PREDICTED: similar to hCG2002932 LOC345645 0.334 PREDICTED: similar to hCG2002932 LOC345645 0.334 PREDICTED: hypothetical protein LOC345645 AFG3L2 0.245 AFG3 ATPase family gene 3-like 2 VCP 0.231 valosin-containing protein SPATA5 0.219 spermatogenesis associated 5 SPATA5L1 0.215 spermatogenesis associated 5-like 1 SPG7 0.211 spastic paraplegia 7 isoform 1 PEX6 0.207 peroxisomal biogenesis factor 6 YME1L1 0.205 YME1-like 1 isoform 1 YME1L1 0.205 YME1-like 1 isoform 3 PEX1 0.198 peroxin1 ATAD2 0.198 ATPase family, AAA domain containing 2 ATAD2B 0.188 ATPase family, AAA domain containing 2B KATNA1 0.186 katanin p60 subunit A 1 KATNAL1 0.185 katanin p60 subunit A-like 1 KATNAL1 0.185 katanin p60 subunit A-like 1 NVL 0.185 nuclear VCP-like isoform 2 NVL 0.185 nuclear VCP-like isoform 1 LOC728806 0.163 PREDICTED: similar to N-ethylmaleimide-sensitive fa... NSF 0.163 vesicle-fusing ATPase KATNAL2 0.156 katanin p60 subunit A-like 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.