ATAD2B 5424

Name: ATAD2B	Sequence: fasta or formatted (1458aa)		NCBI GI: 153792536
Description: ATPase family, AAA domain containing 2B		Referenced in: Bromodomain Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 92 2 C cysteine 1.9 27 1 D aspartate 6.2 90 2 E glutamate 9.5 138 4 F phenylalanine 3.4 49 2 G glycine 5.0 73 2 H histidine 2.8 41 2 I isoleucine 4.9 71 2 K lysine 6.7 98 2 L leucine 9.7 141 3 M methionine 1.9 27 1 N asparagine 4.1 60 2 P proline 4.9 72 2 Q glutamine 3.6 52 1 R arginine 8.0 116 3 S serine 9.7 141 4 T threonine 4.5 65 2 V valine 4.8 70 2 W tryptophan 0.5 8 2 Y tyrosine 1.9 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ATPase family, AAA domain containing 2B ATAD2 0.397 ATPase family, AAA domain containing 2 VCP 0.068 valosin-containing protein SPATA5 0.064 spermatogenesis associated 5 PSMC1 0.058 proteasome 26S ATPase subunit 1 PSMC2 0.054 proteasome 26S ATPase subunit 2 SPATA5L1 0.052 spermatogenesis associated 5-like 1 PSMC6 0.051 proteasome 26S ATPase subunit 6 NVL 0.050 nuclear VCP-like isoform 2 NVL 0.050 nuclear VCP-like isoform 1 PSMC5 0.050 proteasome 26S ATPase subunit 5 PSMC3 0.048 proteasome 26S ATPase subunit 3 KATNA1 0.046 katanin p60 subunit A 1 PEX6 0.044 peroxisomal biogenesis factor 6 PEX1 0.044 peroxin1 LOC652826 0.043 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.043 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.043 proteasome 26S ATPase subunit 4 isoform 1 VPS4A 0.043 vacuolar protein sorting factor 4A LOC345645 0.042 PREDICTED: similar to hCG2002932 LOC345645 0.042 PREDICTED: similar to hCG2002932 LOC345645 0.042 PREDICTED: hypothetical protein LOC345645 VPS4B 0.041 vacuolar protein sorting factor 4B ATAD1 0.041 ATPase family, AAA domain containing 1 KATNAL1 0.040 katanin p60 subunit A-like 1 KATNAL1 0.040 katanin p60 subunit A-like 1 SPAST 0.040 spastin isoform 2 FIGNL1 0.039 fidgetin-like 1 FIGNL1 0.039 fidgetin-like 1 SPAST 0.039 spastin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.