FIGNL1 25691

Name: FIGNL1	Sequence: fasta or formatted (674aa)		NCBI GI: 31742536
Description: fidgetin-like 1		Referenced in: Cytoskeleton
Other entries for this name: alt mRNA [674aa] fidgetin-like 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 54 2 C cysteine 2.1 14 2 D aspartate 4.7 32 1 E glutamate 6.5 44 3 F phenylalanine 4.0 27 2 G glycine 6.7 45 2 H histidine 1.3 9 1 I isoleucine 6.2 42 2 K lysine 7.1 48 2 L leucine 7.3 49 2 M methionine 1.9 13 2 N asparagine 4.5 30 2 P proline 6.1 41 2 Q glutamine 5.6 38 2 R arginine 4.6 31 3 S serine 9.8 66 3 T threonine 5.2 35 2 V valine 5.2 35 2 W tryptophan 1.2 8 1 Y tyrosine 1.9 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 fidgetin-like 1 FIGNL1 1.000 fidgetin-like 1 FIGN 0.269 fidgetin SPAST 0.235 spastin isoform 2 SPAST 0.235 spastin isoform 1 KATNAL1 0.173 katanin p60 subunit A-like 1 KATNAL1 0.173 katanin p60 subunit A-like 1 KATNA1 0.172 katanin p60 subunit A 1 FIGNL2 0.165 fidgetin-like 2 VPS4B 0.152 vacuolar protein sorting factor 4B VPS4A 0.151 vacuolar protein sorting factor 4A KATNAL2 0.149 katanin p60 subunit A-like 2 ATAD1 0.125 ATPase family, AAA domain containing 1 SPATA5 0.115 spermatogenesis associated 5 VCP 0.109 valosin-containing protein SPATA5L1 0.102 spermatogenesis associated 5-like 1 NVL 0.097 nuclear VCP-like isoform 2 NVL 0.097 nuclear VCP-like isoform 1 LOC652826 0.095 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.095 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.095 proteasome 26S ATPase subunit 4 isoform 1 PSMC1 0.093 proteasome 26S ATPase subunit 1 PSMC6 0.091 proteasome 26S ATPase subunit 6 PSMC5 0.090 proteasome 26S ATPase subunit 5 PSMC3 0.087 proteasome 26S ATPase subunit 3 PSMC2 0.086 proteasome 26S ATPase subunit 2 ATAD2B 0.084 ATPase family, AAA domain containing 2B ATAD2 0.083 ATPase family, AAA domain containing 2 PEX6 0.081 peroxisomal biogenesis factor 6 PEX1 0.078 peroxin1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.