PEX6 10827

Name: PEX6	Sequence: fasta or formatted (980aa)		NCBI GI: 194018488
Description: peroxisomal biogenesis factor 6		Referenced in: Peroxisomes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 96 3 C cysteine 2.1 21 2 D aspartate 3.9 38 1 E glutamate 6.6 65 2 F phenylalanine 2.2 22 2 G glycine 9.6 94 2 H histidine 1.7 17 1 I isoleucine 1.9 19 2 K lysine 2.2 22 2 L leucine 16.2 159 3 M methionine 1.1 11 1 N asparagine 1.3 13 1 P proline 8.7 85 5 Q glutamine 3.5 34 1 R arginine 7.1 70 2 S serine 7.6 74 2 T threonine 4.6 45 2 V valine 7.7 75 2 W tryptophan 1.0 10 1 Y tyrosine 1.0 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 peroxisomal biogenesis factor 6 VCP 0.142 valosin-containing protein NVL 0.138 nuclear VCP-like isoform 2 NVL 0.138 nuclear VCP-like isoform 1 SPATA5 0.128 spermatogenesis associated 5 PEX1 0.122 peroxin1 SPATA5L1 0.121 spermatogenesis associated 5-like 1 PSMC5 0.083 proteasome 26S ATPase subunit 5 AFG3L2 0.077 AFG3 ATPase family gene 3-like 2 PSMC3 0.075 proteasome 26S ATPase subunit 3 PSMC1 0.074 proteasome 26S ATPase subunit 1 KATNA1 0.070 katanin p60 subunit A 1 PSMC2 0.070 proteasome 26S ATPase subunit 2 PSMC6 0.069 proteasome 26S ATPase subunit 6 ATAD2 0.069 ATPase family, AAA domain containing 2 LOC652826 0.069 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.069 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.069 proteasome 26S ATPase subunit 4 isoform 1 KATNAL1 0.068 katanin p60 subunit A-like 1 KATNAL1 0.068 katanin p60 subunit A-like 1 SPG7 0.067 spastic paraplegia 7 isoform 1 ATAD2B 0.067 ATPase family, AAA domain containing 2B YME1L1 0.063 YME1-like 1 isoform 1 YME1L1 0.063 YME1-like 1 isoform 3 KATNAL2 0.063 katanin p60 subunit A-like 2 VPS4A 0.057 vacuolar protein sorting factor 4A SPAST 0.057 spastin isoform 2 SPAST 0.057 spastin isoform 1 VPS4B 0.056 vacuolar protein sorting factor 4B FIGNL1 0.056 fidgetin-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.