PEX1 29121

Name: PEX1	Sequence: fasta or formatted (1283aa)		NCBI GI: 4505725
Description: peroxin1		Referenced in: Peroxisomes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 76 2 C cysteine 1.4 18 1 D aspartate 5.8 74 2 E glutamate 6.5 84 3 F phenylalanine 3.6 46 2 G glycine 5.8 75 4 H histidine 2.7 34 1 I isoleucine 5.4 69 2 K lysine 6.0 77 2 L leucine 12.2 156 3 M methionine 1.8 23 2 N asparagine 3.6 46 2 P proline 4.9 63 3 Q glutamine 6.4 82 3 R arginine 4.6 59 2 S serine 9.4 121 4 T threonine 4.4 57 3 V valine 6.9 88 2 W tryptophan 1.2 15 1 Y tyrosine 1.6 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 peroxin1 VCP 0.099 valosin-containing protein SPATA5 0.097 spermatogenesis associated 5 PEX6 0.093 peroxisomal biogenesis factor 6 SPATA5L1 0.085 spermatogenesis associated 5-like 1 NVL 0.083 nuclear VCP-like isoform 2 NVL 0.083 nuclear VCP-like isoform 1 PSMC6 0.061 proteasome 26S ATPase subunit 6 PSMC5 0.061 proteasome 26S ATPase subunit 5 PSMC1 0.057 proteasome 26S ATPase subunit 1 PSMC3 0.056 proteasome 26S ATPase subunit 3 PSMC2 0.053 proteasome 26S ATPase subunit 2 LOC652826 0.053 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.053 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.053 proteasome 26S ATPase subunit 4 isoform 1 AFG3L2 0.051 AFG3 ATPase family gene 3-like 2 ATAD2B 0.051 ATPase family, AAA domain containing 2B NSF 0.049 vesicle-fusing ATPase ATAD2 0.049 ATPase family, AAA domain containing 2 LOC728806 0.049 PREDICTED: similar to N-ethylmaleimide-sensitive fa... KATNA1 0.049 katanin p60 subunit A 1 YME1L1 0.047 YME1-like 1 isoform 1 YME1L1 0.047 YME1-like 1 isoform 3 KATNAL1 0.046 katanin p60 subunit A-like 1 KATNAL1 0.046 katanin p60 subunit A-like 1 SPG7 0.045 spastic paraplegia 7 isoform 1 VPS4A 0.043 vacuolar protein sorting factor 4A SPAST 0.043 spastin isoform 2 SPAST 0.043 spastin isoform 1 LOC345645 0.042 PREDICTED: similar to hCG2002932 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.