ATAD1 25437

Name: ATAD1	Sequence: fasta or formatted (361aa)		NCBI GI: 31377644
Description: ATPase family, AAA domain containing 1		Referenced in: Cytoskeleton Mitochondria
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 30 3 C cysteine 1.7 6 1 D aspartate 7.5 27 2 E glutamate 6.1 22 2 F phenylalanine 3.6 13 1 G glycine 3.9 14 1 H histidine 3.0 11 1 I isoleucine 6.6 24 2 K lysine 7.8 28 3 L leucine 10.2 37 2 M methionine 3.6 13 2 N asparagine 3.3 12 1 P proline 3.9 14 2 Q glutamine 5.0 18 3 R arginine 5.0 18 2 S serine 6.4 23 3 T threonine 5.0 18 1 V valine 6.6 24 2 W tryptophan 1.1 4 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ATPase family, AAA domain containing 1 KATNAL1 0.241 katanin p60 subunit A-like 1 KATNAL1 0.241 katanin p60 subunit A-like 1 SPAST 0.241 spastin isoform 2 SPAST 0.241 spastin isoform 1 FIGNL1 0.240 fidgetin-like 1 FIGNL1 0.240 fidgetin-like 1 KATNA1 0.237 katanin p60 subunit A 1 VPS4B 0.218 vacuolar protein sorting factor 4B KATNAL2 0.211 katanin p60 subunit A-like 2 VCP 0.197 valosin-containing protein PSMC6 0.195 proteasome 26S ATPase subunit 6 VPS4A 0.195 vacuolar protein sorting factor 4A SPATA5 0.186 spermatogenesis associated 5 NVL 0.176 nuclear VCP-like isoform 2 NVL 0.176 nuclear VCP-like isoform 1 PSMC3 0.175 proteasome 26S ATPase subunit 3 PSMC5 0.173 proteasome 26S ATPase subunit 5 FIGN 0.173 fidgetin ATAD2 0.172 ATPase family, AAA domain containing 2 ATAD2B 0.171 ATPase family, AAA domain containing 2B SPATA5L1 0.165 spermatogenesis associated 5-like 1 LOC652826 0.162 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.162 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.162 proteasome 26S ATPase subunit 4 isoform 1 PSMC1 0.160 proteasome 26S ATPase subunit 1 PSMC2 0.137 proteasome 26S ATPase subunit 2 AFG3L2 0.134 AFG3 ATPase family gene 3-like 2 PEX1 0.133 peroxin1 PEX6 0.130 peroxisomal biogenesis factor 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.