Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

BLASTP matches in selected species for COL22A1 - GI:40805823

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       40805823        3474   1626   collagen, type XXII, alpha 1
M. musculus      94398686        3023   1625   PREDICTED: collagen, type XXII, alpha...
D. rerio         189532157       1211   1487   PREDICTED: similar to Collagen alpha-...
C. intestinalis  198416097        835   1831   PREDICTED: similar to collagen, type ...
S. purpuratus    115911557        847   1772   PREDICTED: similar to 6a fibrillar co...
D. melanogaster  24581820         821   1779   Collagen type IV CG4145-PA, isoform A...
C. elegans       17568911         894   1758   LEThal family member (let-2) 
A. thaliana      42572805         134    579   unknown protein 
S. cerevisiae    6324755           52    633   Actin assembly factor, activates the ...
E. coli          89107941          33    413   3-oxoacyl-[acyl-carrier-protein] synt...
A. pernix        14601009          38    421   hypothetical protein APE_0840 

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press