C19orf57 25554

Name: C19orf57	Sequence: fasta or formatted (637aa)		NCBI GI: 31543148
Description: hypothetical protein LOC79173		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 55 2 C cysteine 1.6 10 1 D aspartate 6.8 43 2 E glutamate 8.3 53 2 F phenylalanine 1.6 10 1 G glycine 12.6 80 2 H histidine 2.0 13 2 I isoleucine 1.4 9 1 K lysine 3.9 25 2 L leucine 8.0 51 2 M methionine 1.3 8 2 N asparagine 1.3 8 1 P proline 12.2 78 2 Q glutamine 6.3 40 2 R arginine 5.0 32 2 S serine 9.7 62 3 T threonine 4.7 30 2 V valine 3.6 23 2 W tryptophan 0.6 4 1 Y tyrosine 0.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC79173 COL1A1 0.032 alpha 1 type I collagen preproprotein COL3A1 0.029 collagen type III alpha 1 preproprotein COL7A1 0.029 alpha 1 type VII collagen precursor COL4A1 0.026 alpha 1 type IV collagen preproprotein COL5A1 0.026 alpha 1 type V collagen preproprotein COL5A2 0.025 alpha 2 type V collagen preproprotein COL8A2 0.025 collagen, type VIII, alpha 2 RP1L1 0.024 retinitis pigmentosa 1-like 1 AGAP2 0.023 centaurin, gamma 1 isoform PIKE-L LOC100293055 0.023 PREDICTED: similar to COL22A1 protein COL4A5 0.023 type IV collagen alpha 5 isoform 1 precursor COL2A1 0.023 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.023 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A5 0.023 type IV collagen alpha 5 isoform 3 precursor BSN 0.022 bassoon protein COL4A5 0.022 type IV collagen alpha 5 isoform 2 precursor COL9A3 0.022 alpha 3 type IX collagen COL5A3 0.021 collagen, type V, alpha 3 preproprotein COL11A2 0.020 collagen, type XI, alpha 2 isoform 3 preproprotein ... TACC2 0.020 transforming, acidic coiled-coil containing protein... COL11A1 0.020 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.020 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.020 alpha 1 type XI collagen isoform A preproprotein [Ho... COL23A1 0.020 collagen, type XXIII, alpha 1 EMID1 0.019 EMI domain containing 1 COL13A1 0.019 alpha 1 type XIII collagen isoform 20 COL13A1 0.019 alpha 1 type XIII collagen isoform 18 COL13A1 0.019 alpha 1 type XIII collagen isoform 17 COL13A1 0.019 alpha 1 type XIII collagen isoform 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.