Guide to the Human Genome
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Name: AGAP2 Sequence: fasta or formatted (1192aa) NCBI GI: 170650694
Description:

centaurin, gamma 1 isoform PIKE-L

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [836aa] centaurin, gamma 1 isoform PIKE-S
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4        136           4
 C cysteine            1.2         14           2
 D aspartate           3.4         41           2
 E glutamate           4.9         59           2
 F phenylalanine       1.7         20           1
 G glycine            10.0        119           4
 H histidine           1.9         23           1
 I isoleucine          2.8         33           1
 K lysine              4.9         59           3
 L leucine             9.6        115           4
 M methionine          0.8         10           1
 N asparagine          1.8         22           1
 P proline             9.4        112           5
 Q glutamine           3.2         38           3
 R arginine            7.3         87           3
 S serine             12.5        149           3
 T threonine           6.0         72           3
 V valine              4.4         53           2
 W tryptophan          1.3         16           1
 Y tyrosine            1.2         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.642   centaurin, gamma 1 isoform PIKE-S 
AGAP1                 0.339   centaurin, gamma 2 isoform 1 
AGAP1                 0.337   centaurin, gamma 2 isoform 2 
AGAP3                 0.330   centaurin, gamma 3 isoform a 
AGAP11                0.188   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP8                 0.186   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP6                 0.185   centaurin, gamma-like family, member 3 
AGAP4                 0.185   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.184   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP5                 0.184   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.177   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.177   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP3                 0.114   centaurin, gamma 3 isoform b 
LOC100294038          0.070   PREDICTED: similar to centaurin, gamma-like family,...
ACAP3                 0.049   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ASAP3                 0.044   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.044   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
ACAP2                 0.044   centaurin, beta 2 
GIT2                  0.044   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.044   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.044   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.044   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.044   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.044   G protein-coupled receptor kinase interacting ArfGA...
GIT1                  0.042   G protein-coupled receptor kinase interactor 1 isof...
GIT1                  0.042   G protein-coupled receptor kinase interactor 1 isofo...
ASAP1                 0.040   development and differentiation enhancing factor 1 [...
ACAP1                 0.039   centaurin beta1 
ASAP2                 0.036   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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