BSN 37252

Name: BSN	Sequence: fasta or formatted (3926aa)		NCBI GI: 91208420
Description: bassoon protein		Referenced in: Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 388 3 C cysteine 0.9 37 2 D aspartate 3.7 145 2 E glutamate 7.0 275 4 F phenylalanine 1.5 59 1 G glycine 9.3 365 4 H histidine 2.3 92 2 I isoleucine 1.7 67 2 K lysine 3.9 155 3 L leucine 7.3 285 2 M methionine 1.6 61 2 N asparagine 1.2 48 1 P proline 12.7 498 3 Q glutamine 7.0 274 5 R arginine 6.7 262 4 S serine 10.9 426 4 T threonine 6.0 236 3 V valine 3.7 146 3 W tryptophan 0.3 12 1 Y tyrosine 2.4 95 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 bassoon protein PCLO 0.090 piccolo isoform 2 PCLO 0.090 piccolo isoform 1 NACA 0.011 nascent polypeptide-associated complex alpha subuni... ZNF469 0.009 zinc finger protein 469 FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 MUC12 0.009 PREDICTED: mucin 12 PRG4 0.008 proteoglycan 4 isoform D PRG4 0.008 proteoglycan 4 isoform C PRG4 0.008 proteoglycan 4 isoform B PRG4 0.008 proteoglycan 4 isoform A SRCAP 0.008 Snf2-related CBP activator protein SRRM2 0.008 splicing coactivator subunit SRm300 C6orf132 0.008 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.008 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.008 PREDICTED: hypothetical protein LOC647024 FLJ22184 0.007 PREDICTED: hypothetical protein FLJ22184 POLR2A 0.007 DNA-directed RNA polymerase II A MAP7D1 0.007 MAP7 domain containing 1 TAF4 0.007 TBP-associated factor 4 CIC 0.007 capicua homolog MUC2 0.007 mucin 2 precursor SRRM1 0.007 serine/arginine repetitive matrix 1 PRB2 0.006 proline-rich protein BstNI subfamily 2 LOC100170229 0.006 hypothetical protein LOC100170229 FLJ22184 0.006 PREDICTED: hypothetical protein LOC80164 ZNF853 0.006 zinc finger protein 853 FLG 0.006 filaggrin TCOF1 0.006 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.006 Treacher Collins-Franceschetti syndrome 1 isoform d... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.