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Search of human proteins with 209447093
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209447093 prostate collagen triple helix isoform 2 [Homo
sapiens]
(116 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209447093 prostate collagen triple helix isoform 2 [Homo sapi... 249 3e-67
gi|239755972 PREDICTED: similar to prostate collagen triple heli... 242 4e-65
gi|239750495 PREDICTED: similar to prostate collagen triple heli... 242 4e-65
gi|239744792 PREDICTED: hypothetical protein XP_002343272 [Homo ... 242 4e-65
gi|62234340 prostate collagen triple helix isoform 1 [Homo sapiens] 227 1e-60
gi|239753818 PREDICTED: hypothetical protein [Homo sapiens] 67 3e-12
gi|239748381 PREDICTED: hypothetical protein XP_002346646 [Homo ... 67 3e-12
gi|239742309 PREDICTED: hypothetical protein XP_002342482 [Homo ... 67 3e-12
gi|16753207 ubiquilin 2 [Homo sapiens] 58 2e-09
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 55 2e-08
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 53 6e-08
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 53 6e-08
gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens] 52 1e-07
gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens] 52 1e-07
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 49 7e-07
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 49 7e-07
gi|169175458 PREDICTED: similar to hCG2040468 [Homo sapiens] 49 9e-07
gi|17402900 far upstream element-binding protein [Homo sapiens] 49 9e-07
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 48 1e-06
gi|48762934 alpha 2 type I collagen [Homo sapiens] 48 2e-06
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 48 2e-06
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 47 2e-06
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 47 3e-06
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 47 3e-06
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 47 3e-06
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 46 6e-06
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 46 6e-06
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 46 6e-06
gi|39930511 collagen and calcium binding EGF domains 1 [Homo sap... 46 6e-06
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 46 7e-06
>gi|209447093 prostate collagen triple helix isoform 2 [Homo
sapiens]
Length = 116
Score = 249 bits (637), Expect = 3e-67
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 1 MLPEAWSSELTILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
MLPEAWSSELTILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR
Sbjct: 1 MLPEAWSSELTILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP
Sbjct: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
>gi|239755972 PREDICTED: similar to prostate collagen triple helix
[Homo sapiens]
Length = 116
Score = 242 bits (618), Expect = 4e-65
Identities = 113/116 (97%), Positives = 113/116 (97%)
Query: 1 MLPEAWSSELTILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
M PEAWSSEL ILSNLMG SEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR
Sbjct: 1 MPPEAWSSELMILSNLMGISEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP
Sbjct: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
>gi|239750495 PREDICTED: similar to prostate collagen triple helix
[Homo sapiens]
Length = 116
Score = 242 bits (618), Expect = 4e-65
Identities = 113/116 (97%), Positives = 113/116 (97%)
Query: 1 MLPEAWSSELTILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
M PEAWSSEL ILSNLMG SEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR
Sbjct: 1 MPPEAWSSELMILSNLMGISEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP
Sbjct: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
>gi|239744792 PREDICTED: hypothetical protein XP_002343272 [Homo
sapiens]
Length = 116
Score = 242 bits (618), Expect = 4e-65
Identities = 113/116 (97%), Positives = 113/116 (97%)
Query: 1 MLPEAWSSELTILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
M PEAWSSEL ILSNLMG SEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR
Sbjct: 1 MPPEAWSSELMILSNLMGISEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPR 60
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP
Sbjct: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
>gi|62234340 prostate collagen triple helix isoform 1 [Homo sapiens]
Length = 107
Score = 227 bits (579), Expect = 1e-60
Identities = 105/105 (100%), Positives = 105/105 (100%)
Query: 12 ILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGP 71
ILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGP
Sbjct: 3 ILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGP 62
Query: 72 ASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
ASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP
Sbjct: 63 ASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 107
>gi|239753818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 67.0 bits (162), Expect = 3e-12
Identities = 29/57 (50%), Positives = 31/57 (54%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
+TPGSP P P SP GPG PIGP P P GP GP P+ P P P P P P
Sbjct: 16 QTPGSPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGPFFPVSPWSPFSPARPSGPVLP 72
Score = 65.1 bits (157), Expect = 1e-11
Identities = 37/80 (46%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 39 KTRVSPIFPF--SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM 96
K +S + P +P SP P P +P P GP+GP SP P GPMGP PV P P
Sbjct: 5 KADLSTMLPHLQTPGSPGSPCSPLSPFGPGGPIGPTSPFSPS---GPMGPFFPVSPWSPF 61
Query: 97 LPLGPSGPVGPTSP--LFPF 114
P PSGPV P P FPF
Sbjct: 62 SPARPSGPVLPLKPSERFPF 81
>gi|239748381 PREDICTED: hypothetical protein XP_002346646 [Homo
sapiens]
Length = 148
Score = 67.0 bits (162), Expect = 3e-12
Identities = 29/57 (50%), Positives = 31/57 (54%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
+TPGSP P P SP GPG PIGP P P GP GP P+ P P P P P P
Sbjct: 16 QTPGSPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGPFFPVSPWSPFSPARPSGPVLP 72
Score = 65.1 bits (157), Expect = 1e-11
Identities = 37/80 (46%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 39 KTRVSPIFPF--SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM 96
K +S + P +P SP P P +P P GP+GP SP P GPMGP PV P P
Sbjct: 5 KADLSTMLPHLQTPGSPGSPCSPLSPFGPGGPIGPTSPFSPS---GPMGPFFPVSPWSPF 61
Query: 97 LPLGPSGPVGPTSP--LFPF 114
P PSGPV P P FPF
Sbjct: 62 SPARPSGPVLPLKPSERFPF 81
>gi|239742309 PREDICTED: hypothetical protein XP_002342482 [Homo
sapiens]
Length = 148
Score = 67.0 bits (162), Expect = 3e-12
Identities = 29/57 (50%), Positives = 31/57 (54%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
+TPGSP P P SP GPG PIGP P P GP GP P+ P P P P P P
Sbjct: 16 QTPGSPGSPCSPLSPFGPGGPIGPTSPFSPSGPMGPFFPVSPWSPFSPARPSGPVLP 72
Score = 65.1 bits (157), Expect = 1e-11
Identities = 37/80 (46%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 39 KTRVSPIFPF--SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM 96
K +S + P +P SP P P +P P GP+GP SP P GPMGP PV P P
Sbjct: 5 KADLSTMLPHLQTPGSPGSPCSPLSPFGPGGPIGPTSPFSPS---GPMGPFFPVSPWSPF 61
Query: 97 LPLGPSGPVGPTSP--LFPF 114
P PSGPV P P FPF
Sbjct: 62 SPARPSGPVLPLKPSERFPF 81
>gi|16753207 ubiquilin 2 [Homo sapiens]
Length = 624
Score = 57.8 bits (138), Expect = 2e-09
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 3 PEAWSSELTILSNLMGTSEEG-NLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRT 61
P A + + I L + E L+ + +P V T + P+ P +P P P++P T
Sbjct: 449 PRAMQALMQIQQGLQTLATEAPGLIPSFTPGVGVGVLGTAIGPVGPVTPIGPIGPIVPFT 508
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P GP+GP P GP P G G G P GP + PS PTS P
Sbjct: 509 P---IGPIGPIGPTGPAAPPGSTGSGGPTGP--TVSSAAPSETTSPTSESGP 555
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 57 LIPR-TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFC 115
LIP TPG G +G A IGP+GP P+GP GP++P P GP+GP P P
Sbjct: 472 LIPSFTPGVGVGVLGTA--------IGPVGPVTPIGPIGPIVPFTPIGPIGPIGPTGPAA 523
Query: 116 P 116
P
Sbjct: 524 P 524
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 54.7 bits (130), Expect = 2e-08
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPG---KPVGPKGPMLPLG 100
P+ P P P P++P P P P+ P +P+ PG + P+ PG PV P PM P+
Sbjct: 245 PVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVP 304
Query: 101 PSGPVGPTSPLFPFCP 116
P P+ P P P
Sbjct: 305 PWPPMAPVPTGPPMAP 320
Score = 53.9 bits (128), Expect = 3e-08
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTP---GSPWGPVGPASPLG---PGFPIGPMGPGKPVGPKG 94
R++P+ P+ P +P P P P G P PV P P+ PG P+ + PG P+ P
Sbjct: 290 RMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLP 349
Query: 95 PMLPLGPSGPVGPTSPLFPFCP 116
P P+ P P P +PL P P
Sbjct: 350 PGPPMAPLPPGPPMAPLPPGPP 371
Score = 53.5 bits (127), Expect = 3e-08
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPA------SPLGPGFPIGPMGPGKP---V 90
+R++P+ P +P P P P PW P+ P +P+ PG P+ + PG P V
Sbjct: 280 SRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARV 339
Query: 91 GPKGPMLPLGPSGPVGPTSPLFPFCP 116
P PM PL P P+ P P P P
Sbjct: 340 PPGPPMAPLPPGPPMAPLPPGPPMAP 365
Score = 53.1 bits (126), Expect = 5e-08
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 42 VSPIFPFSPRSPFQ---PLIPRTPGSPWGPVGPASPLG---PGFPIGPMGPGKPVGPKGP 95
++P+ P+ P +P P+ P PG P V P P+ PG P+ P+ PG P+ P P
Sbjct: 300 MAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPP 359
Query: 96 MLPLGPSGPVGPTSPLFP 113
P+ P P P +PL P
Sbjct: 360 GPPMAPLPPGPPMAPLPP 377
Score = 50.4 bits (119), Expect = 3e-07
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 45 IFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGK---PVGPKGPMLPLGP 101
+ P PR P P+ P P P P+ P P+ P P+ P+ PG PV P M P+ P
Sbjct: 237 LVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPP 296
Query: 102 SGPVGPTSPLFPFCP 116
P+ P P P P
Sbjct: 297 WPPMAPVPPWPPMAP 311
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPA---SPLGPGFPIGPMGPGKPVGPKG 94
RV P P + P P+ P PG P P+ P +PL PG P+ P+ P V G
Sbjct: 329 RVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTG 385
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 52.8 bits (125), Expect = 6e-08
Identities = 27/51 (52%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P PG+P GPVGPA G GP GP PVGP G P GP GP G
Sbjct: 1045 PGAPGAPGAP-GPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRG 1094
Score = 48.9 bits (115), Expect = 9e-07
Identities = 30/67 (44%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGK--------PVGPKGPMLPLGPSGPVG 106
P PGSP G GP+ GP P GP G PGK P+GP GP G +GPVG
Sbjct: 1120 PGPPGSP-GEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVG 1178
Query: 107 PTSPLFP 113
P P P
Sbjct: 1179 PPGPPGP 1185
Score = 47.4 bits (111), Expect = 2e-06
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG+P P P P+GP G G P GP GP+ P+G GP GP P
Sbjct: 1045 PGAPGAPGAPG-PVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGP 1092
Score = 45.8 bits (107), Expect = 7e-06
Identities = 29/67 (43%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 59 PRTPGSPW-----GPVGPASPLG----PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
P GSP G GPA P G PG P GP+GP G +G P GP+GPVGP
Sbjct: 1024 PGRDGSPGAKGDRGETGPAGPPGAPGAPGAP-GPVGPAGKSGDRGETGPAGPAGPVGPVG 1082
Query: 110 PLFPFCP 116
P P
Sbjct: 1083 ARGPAGP 1089
Score = 45.4 bits (106), Expect = 9e-06
Identities = 30/70 (42%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 47 PFSPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGP 104
P PR P P + G+P G G P+GP P G G PVGP GP GP GP
Sbjct: 1137 PAGPRGP-----PGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPP---GPPGP 1188
Query: 105 VGPTSPLFPF 114
GP S F F
Sbjct: 1189 PGPPSAGFDF 1198
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 65 PWGPVG-PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P GP G P +P PG P+GP G G GP P GP GPVG P P P
Sbjct: 1041 PAGPPGAPGAPGAPG-PVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGP 1092
Score = 43.9 bits (102), Expect = 3e-05
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 30 SPTVKALFGKTRVS--PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPG 87
SP K G+T + P P +P +P P+ P G GPA P GP P+G GP
Sbjct: 1029 SPGAKGDRGETGPAGPPGAPGAPGAP-GPVGPAGKSGDRGETGPAGPAGPVGPVGARGPA 1087
Query: 88 KPVGPKGPMLPLGPSGPVG 106
P GP+G G G G
Sbjct: 1088 GPQGPRGDKGETGEQGDRG 1106
Score = 42.7 bits (99), Expect = 6e-05
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 65 PWGPVGPASPLGPGFP--IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P GP GPA P PGFP +G G P GP+G P G G GP P
Sbjct: 333 PPGPTGPAGP--PGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGP 378
Score = 42.0 bits (97), Expect = 1e-04
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G P P P +P GP P G G GP GP P+GP G GP P P
Sbjct: 1043 GPPGAPGAPGAP-GPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGP 1092
Score = 41.6 bits (96), Expect = 1e-04
Identities = 21/47 (44%), Positives = 23/47 (48%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP GP+ GP P GP G GP+G P G G VGP P P
Sbjct: 884 GPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGP 930
Score = 41.6 bits (96), Expect = 1e-04
Identities = 27/74 (36%), Positives = 28/74 (37%), Gaps = 11/74 (14%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGP----------GFPIGPMGPGKPVGPKGPM 96
P P P P+ R P P GP G G GF G GP P G G
Sbjct: 1071 PAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFS-GLQGPPGPPGSPGEQ 1129
Query: 97 LPLGPSGPVGPTSP 110
P G SGP GP P
Sbjct: 1130 GPSGASGPAGPRGP 1143
Score = 40.8 bits (94), Expect = 2e-04
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 PRTPGSPWGPVGPASPLGP-GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P G GP GP GF P PG+P G GPM P GP GP G
Sbjct: 180 PMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEP-GASGPMGPRGPPGPPG 227
Score = 40.8 bits (94), Expect = 2e-04
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG+ G VGP P G P GP GP G KGP GP+G G P P
Sbjct: 877 PGAA-GRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGP 927
Score = 40.4 bits (93), Expect = 3e-04
Identities = 27/64 (42%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P T G GP G P GP P GP PG+ P P LP GP GP G
Sbjct: 93 PVCPDGSESPTDQETTGVE-GPKGDTGPRGPRGPAGP--PGRDGIPGQPGLP-GPPGPPG 148
Query: 107 PTSP 110
P P
Sbjct: 149 PPGP 152
Score = 40.4 bits (93), Expect = 3e-04
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
PG P GP G A P G G G G KG P GP+GP GP P+
Sbjct: 805 PGPP-GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPI 853
Score = 40.0 bits (92), Expect = 4e-04
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 10/49 (20%)
Query: 67 GPVGPASPLG----PGFPIGPMG----PGKPVGPKGPMLPLGPSGPVGP 107
GP+GP+ P G PG P GP G PG+P G G P+GP GP GP
Sbjct: 179 GPMGPSGPRGLPGPPGAP-GPQGFQGPPGEP-GEPGASGPMGPRGPPGP 225
Score = 40.0 bits (92), Expect = 4e-04
Identities = 20/46 (43%), Positives = 21/46 (45%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P G GP P GP G GP GP G +GP GP GP
Sbjct: 885 PPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGP 930
Score = 39.3 bits (90), Expect = 7e-04
Identities = 30/81 (37%), Positives = 32/81 (39%), Gaps = 30/81 (37%)
Query: 59 PRTPGSPWGPVGPASPLG-------PGFPIGPMGPGKPVGPKG------PML-------- 97
P+ P GP GPA P G PG P GP GP P GP G P L
Sbjct: 113 PKGDTGPRGPRGPAGPPGRDGIPGQPGLP-GPPGPPGPPGPPGLGGNFAPQLSYGYDEKS 171
Query: 98 --------PLGPSGPVGPTSP 110
P+GPSGP G P
Sbjct: 172 TGGISVPGPMGPSGPRGLPGP 192
Score = 39.3 bits (90), Expect = 7e-04
Identities = 27/60 (45%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGPGFPIGPMG-PGKP-----VGPKGPMLPLGPSGPVGP 107
P I PG P GP GP P GP P G G PG P G KG P+G GP GP
Sbjct: 403 PGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGP 462
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 24/76 (31%)
Query: 62 PGSPWGPVGPASPLG-------------------PGFP-----IGPMGPGKPVGPKGPML 97
P P GP GP P+G GFP +GP GP GP GP
Sbjct: 840 PPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPG 899
Query: 98 PLGPSGPVGPTSPLFP 113
P G G GP P
Sbjct: 900 PAGKEGGKGPRGETGP 915
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/70 (35%), Positives = 27/70 (38%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
RV P P P P P GP G P G +GP GP P G KG G
Sbjct: 882 RVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADG 941
Query: 101 PSGPVGPTSP 110
P+G G P
Sbjct: 942 PAGAPGTPGP 951
Score = 38.9 bits (89), Expect = 9e-04
Identities = 25/62 (40%), Positives = 26/62 (41%), Gaps = 21/62 (33%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGKP--------------------VGPKGPMLPLGPSGPV 105
GP GPA P GP PIG +G PG VGP GP GP GP
Sbjct: 839 GPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPP 898
Query: 106 GP 107
GP
Sbjct: 899 GP 900
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 34 KALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 93
K+ G + P+ P PR +P PG+P GP G P PG P G G P+GP+
Sbjct: 170 KSTGGISVPGPMGPSGPRG-----LPGPPGAP-GPQGFQGP--PGEP-GEPGASGPMGPR 220
Query: 94 GPMLPLGPSGPVG 106
GP P G +G G
Sbjct: 221 GPPGPPGKNGDDG 233
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/41 (48%), Positives = 20/41 (48%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
G G A P GP P GP G VG KG P GP G GP
Sbjct: 326 GATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGP 366
Score = 38.1 bits (87), Expect = 0.002
Identities = 29/82 (35%), Positives = 29/82 (35%), Gaps = 23/82 (28%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----------------------PGFPIGPM 84
P PR P R P GP G A P G PGFP G
Sbjct: 357 PQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFP-GAR 415
Query: 85 GPGKPVGPKGPMLPLGPSGPVG 106
GP P GP GP P G SG G
Sbjct: 416 GPSGPQGPGGPPGPKGNSGEPG 437
Score = 38.1 bits (87), Expect = 0.002
Identities = 29/79 (36%), Positives = 32/79 (40%), Gaps = 17/79 (21%)
Query: 47 PFSPRSPFQPLIPRTPGS--------PWGPVGPASPLGP-GFP--------IGPMGPGKP 89
P +P S P + PG P G G A P G G P GP+GP P
Sbjct: 715 PGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGP 774
Query: 90 VGPKGPMLPLGPSGPVGPT 108
G G GPSGP GPT
Sbjct: 775 AGAPGDKGESGPSGPAGPT 793
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/44 (40%), Positives = 19/44 (43%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP+GP P G G GP P GP G G G GP P
Sbjct: 767 GPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGP 810
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/43 (44%), Positives = 20/43 (46%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P GP GPA G GP GP P G +G G GP GP
Sbjct: 768 PIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGP 810
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 46 FPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
F P + QP PG G G A P GP P GP GP VG G G +GP
Sbjct: 813 FAGPPGADGQPGAKGEPGDA-GAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP 871
Query: 106 GPT 108
G T
Sbjct: 872 GAT 874
Score = 37.4 bits (85), Expect = 0.003
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 26/89 (29%)
Query: 53 PFQPLIPRTPGSPWGPVGPAS-------------------------PLGPGFPIGPMGPG 87
P QP +P PG P GP GP P+GP P G GP
Sbjct: 135 PGQPGLPGPPGPP-GPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPP 193
Query: 88 KPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
GP+G P G G G + P+ P P
Sbjct: 194 GAPGPQGFQGPPGEPGEPGASGPMGPRGP 222
Score = 37.4 bits (85), Expect = 0.003
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG P G VGPA G GP GP P G +G P G G G P P
Sbjct: 601 PGPP-GAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 651
Score = 37.0 bits (84), Expect = 0.003
Identities = 29/81 (35%), Positives = 30/81 (37%), Gaps = 18/81 (22%)
Query: 47 PFSPRSPFQPL----IPRTPGSPWGPVGPASPLGP-------------GFPIGPMGPGKP 89
P PR P P IP PG P GP GP P GP G+ G
Sbjct: 119 PRGPRGPAGPPGRDGIPGQPGLP-GPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISV 177
Query: 90 VGPKGPMLPLGPSGPVGPTSP 110
GP GP P G GP G P
Sbjct: 178 PGPMGPSGPRGLPGPPGAPGP 198
Score = 36.2 bits (82), Expect = 0.006
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG+P GP G G GP GP P GP G +G G GP P
Sbjct: 313 PGAP-GPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGP 360
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/49 (38%), Positives = 21/49 (42%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P P G G GP P GP G G +G P GP+G GP
Sbjct: 768 PIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGP 816
Score = 35.4 bits (80), Expect = 0.010
Identities = 27/88 (30%), Positives = 29/88 (32%), Gaps = 35/88 (39%)
Query: 60 RTPGSPWGPVGPASPLG----------------------------------PGFPIGPMG 85
R P P GP G A P G PG P P
Sbjct: 994 RGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGA 1053
Query: 86 PGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG PVGP G G +GP GP P+ P
Sbjct: 1054 PG-PVGPAGKSGDRGETGPAGPAGPVGP 1080
Score = 35.0 bits (79), Expect = 0.013
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+PGSP GP G P GP G GP P G +G +G GP G
Sbjct: 543 SPGSP-GPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKG 587
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/55 (40%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P G P GP GPA GP G G G G GP GP GP P P
Sbjct: 799 PGDRGEP-GPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGP 852
Score = 34.7 bits (78), Expect = 0.017
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 12/67 (17%)
Query: 56 PLIPRTPGSPWGPVG----PASP--------LGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P P+ PG P GP G P +P G P+G GP P G +G G G
Sbjct: 417 PSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPG 476
Query: 104 PVGPTSP 110
P G P
Sbjct: 477 PTGLPGP 483
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ P P G G + P GP P G G G GP P G +GP G
Sbjct: 768 PIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPG 818
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG P GP G GP G GP P+GP G P G SG G
Sbjct: 973 PGLP-GPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREG 1016
Score = 33.9 bits (76), Expect = 0.028
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P PG P G GP P GP P G G G G GP GP G
Sbjct: 205 PGEPGEP-GASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQG 251
Score = 33.9 bits (76), Expect = 0.028
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 18/65 (27%)
Query: 67 GPVGPASPLG-PGFP--------IGPMG-PGK--------PVGPKGPMLPLGPSGPVGPT 108
G GPA P G PG P +GP G PG+ P G +G G +GP GPT
Sbjct: 278 GDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPT 337
Query: 109 SPLFP 113
P P
Sbjct: 338 GPAGP 342
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G P G G GP +GP G G +GP P GP+G G P
Sbjct: 590 GEP-GKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGP 636
Score = 32.7 bits (73), Expect = 0.063
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G GP +GP G G P GP GP G GP G SP F P
Sbjct: 599 GVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG--SPGFQGLP 646
Score = 32.7 bits (73), Expect = 0.063
Identities = 27/65 (41%), Positives = 28/65 (43%), Gaps = 15/65 (23%)
Query: 59 PRTPGSPWGPVGPASPLG----------PGFPIGPMG-PGK--PVGPKGPMLPLGPSGPV 105
P TPG P G G +G PG P GP G PGK P G G P GP GP
Sbjct: 946 PGTPG-PQGIAGQRGVVGLPGQRGERGFPGLP-GPSGEPGKQGPSGASGERGPPGPMGPP 1003
Query: 106 GPTSP 110
G P
Sbjct: 1004 GLAGP 1008
Score = 32.3 bits (72), Expect = 0.083
Identities = 18/44 (40%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP G A G G GP VGP G G GP GP P
Sbjct: 584 GPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGP 627
Score = 32.3 bits (72), Expect = 0.083
Identities = 18/47 (38%), Positives = 18/47 (38%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G GP P GP G G P GP GP G G G P P
Sbjct: 764 GLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGP 810
Score = 32.3 bits (72), Expect = 0.083
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 12/82 (14%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPAS------------PLGPGFPIGPMGPGKPVGPKG 94
P P P + P GP GP P GP GP G G KG
Sbjct: 768 PIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKG 827
Query: 95 PMLPLGPSGPVGPTSPLFPFCP 116
G G GP P P P
Sbjct: 828 EPGDAGAKGDAGPPGPAGPAGP 849
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 59 PRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G P G G A G P GP GP P GP G + G G G P
Sbjct: 817 PGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGP 870
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P +P G P G GP+ G P GPMGP GP G G G G
Sbjct: 973 PGLPGPSGEP-GKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEG 1022
Score = 31.6 bits (70), Expect = 0.14
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPAS-------PLGPGFPIGPMGPGKPVGPKGPMLPL 99
P P+ +P P G+P G +GP P PG P G G G GP P
Sbjct: 282 PAGPKG--EPGSPGENGAP-GQMGPRGLPGERGRPGAPG-PAGARGNDGATGAAGPPGPT 337
Query: 100 GPSGPVG 106
GP+GP G
Sbjct: 338 GPAGPPG 344
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 47 PFSPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGP 104
P P P P P PG+ G GP P G P G G P GP G P G G
Sbjct: 333 PPGPTGPAGP--PGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGA 390
Query: 105 VG 106
G
Sbjct: 391 DG 392
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 13/80 (16%)
Query: 47 PFSPRSPFQPLIPR----TPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
P P+ P P P+ PG+P G G P+G P GP G G +G
Sbjct: 417 PSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPG 476
Query: 98 PLGPSGPV----GPTSPLFP 113
P G GP GP S FP
Sbjct: 477 PTGLPGPPGERGGPGSRGFP 496
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 63 GSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GSP G G P+GP P G G GP GP P G G G
Sbjct: 755 GSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPG 800
Score = 31.2 bits (69), Expect = 0.18
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKP-----VGPKGPMLPLGPSGPVGP 107
G P GP G P PG GP G P GPKGP G GP GP
Sbjct: 473 GEP-GPTGLPGP--PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGP 519
Score = 31.2 bits (69), Expect = 0.18
Identities = 20/55 (36%), Positives = 21/55 (38%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P+ P G GPA P G G G G KG G GP G T P P
Sbjct: 504 PKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP 558
Score = 31.2 bits (69), Expect = 0.18
Identities = 16/40 (40%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G GP P GP G GP G +G P GP G G
Sbjct: 617 GAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAG 656
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G G A G P G +GP G G P GP+GP G
Sbjct: 585 PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAG 629
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 59 PRTPGSPWGPVGPASPLG-PGF-----PIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P G G P G PGF P GP G G +G LG GP G
Sbjct: 621 PPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSG 674
Score = 30.4 bits (67), Expect = 0.31
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 12/56 (21%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLP-----------LGPSGPVGPTSP 110
GP GPA G P GP G PG+ P LP GP G GP P
Sbjct: 503 GPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP 558
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 58 IPRTPGSPWGPVGPASP-----LGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG GP P GP P G G P GPKG G G G
Sbjct: 480 LPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAG 533
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/48 (37%), Positives = 18/48 (37%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PR P G G P GP P G G GP G GP G G
Sbjct: 909 PRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAG 956
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 49 SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
SP +P PG+ P SP GP GP GP G GP P G G G
Sbjct: 522 SPGEAGRPGEAGLPGAKGLTGSPGSP-GPDGKTGPPGPAGQDGRPGPPGPPGARGQAG 578
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P + Q + PG P G G G GP G P G G GP GP G
Sbjct: 568 PGPPGARGQAGVMGFPG-PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAG 626
Query: 107 P 107
P
Sbjct: 627 P 627
Score = 29.3 bits (64), Expect = 0.70
Identities = 17/45 (37%), Positives = 18/45 (40%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G VGP P GP G G P G G P G +G G
Sbjct: 915 PAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG 959
Score = 29.3 bits (64), Expect = 0.70
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 16/68 (23%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-------------PGKPVGP--KGPMLPLGPSGPVG 106
P G GP P+GP GP G PG+ P KG GP+GP G
Sbjct: 987 PSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPG 1046
Query: 107 -PTSPLFP 113
P +P P
Sbjct: 1047 APGAPGAP 1054
Score = 28.5 bits (62), Expect = 1.2
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 16/75 (21%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG----------PGKP-----VG 91
P P +P PG P P G + P+GP P GP G PG+P G
Sbjct: 190 PGPPGAPGPQGFQGPPGEPGEP-GASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPG 248
Query: 92 PKGPMLPLGPSGPVG 106
P+G G +G G
Sbjct: 249 PQGARGLPGTAGLPG 263
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GP P G G GP G GP G G VG
Sbjct: 923 GPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVG 962
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GSP P GP GP GP G GP GP G +G +G P
Sbjct: 542 GSPGSP-GPDGKTGPP---GPAGQDGRPGPPGPPGARGQAGVMGFPGP 585
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/49 (32%), Positives = 18/49 (36%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P G G G +G GP G +G G GP GP P
Sbjct: 648 PAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGP 696
Score = 27.7 bits (60), Expect = 2.0
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P + G+P P G P GP G GPKG G G G T P+ P
Sbjct: 715 PGAPGSQGAPGLQGMPGERGAAGLP-GPKGDRGDAGPKGADGSPGKDGVRGLTGPIGP 771
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGF 79
PI P PR P P P GP GP P GF
Sbjct: 1161 PIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGF 1196
Score = 26.9 bits (58), Expect = 3.5
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G P G G LG P G G G +G P GP+GP G
Sbjct: 652 PGEAGKP-GEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRG 698
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P + +P G+P GP G G G GP P GP+G G G G
Sbjct: 652 PGEAGKPGEQGVPGDLGAP-GPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKG 710
Score = 26.2 bits (56), Expect = 5.9
Identities = 25/80 (31%), Positives = 27/80 (33%), Gaps = 29/80 (36%)
Query: 62 PGSPWGPVGPASPLG-------PGFPIGPMG----------PGK-----------PVGPK 93
P P GP G G PG P GP G PG+ P G
Sbjct: 924 PPGPPGPAGEKGSPGADGPAGAPGTP-GPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEP 982
Query: 94 GPMLPLGPSGPVGPTSPLFP 113
G P G SG GP P+ P
Sbjct: 983 GKQGPSGASGERGPPGPMGP 1002
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 52.8 bits (125), Expect = 6e-08
Identities = 28/57 (49%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
R PG P GP+GP P GP GP G P GP GP +GP GP GP L P P
Sbjct: 679 RHPG-PHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGP 734
Score = 52.0 bits (123), Expect = 1e-07
Identities = 26/54 (48%), Positives = 28/54 (51%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P PL P+ P P G GP +GP P GP G P GP GP LGP GP G
Sbjct: 683 PHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPG 736
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/64 (42%), Positives = 29/64 (45%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P P+ P G +GP P GP IGP GP P G GP P G G G
Sbjct: 683 PHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQG 742
Query: 107 PTSP 110
P P
Sbjct: 743 PPGP 746
Score = 50.1 bits (118), Expect = 4e-07
Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P+ P Q L PR P GP G GP P+GP GP P G GP +GP GP G
Sbjct: 655 PQGPQGPPQGL-PR-PQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPG 712
Query: 107 PTSPLFPFCP 116
P + P P
Sbjct: 713 PQGHIGPQGP 722
Score = 47.4 bits (111), Expect = 2e-06
Identities = 27/70 (38%), Positives = 30/70 (42%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P+ P P P P+ P GP GP +GP P GP G P GP G GP G
Sbjct: 686 PLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPG 745
Query: 104 PVGPTSPLFP 113
P G P P
Sbjct: 746 PRGMQGPPHP 755
Score = 46.2 bits (108), Expect = 6e-06
Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGP--GFP-----IGPMGPGKPVGPKGPM 96
P P P P + + G P G +GP P GP G P GP G + GP GP+
Sbjct: 628 PPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPL 687
Query: 97 LPLGPSGPVGPTSP 110
P GP GP G + P
Sbjct: 688 GPQGPPGPQGSSGP 701
Score = 45.1 bits (105), Expect = 1e-05
Identities = 26/69 (37%), Positives = 30/69 (43%)
Query: 42 VSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGP 101
+ P P P+ P P P GP G P GP P G +GP P G +G P GP
Sbjct: 687 LGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGP 746
Query: 102 SGPVGPTSP 110
G GP P
Sbjct: 747 RGMQGPPHP 755
Score = 41.6 bits (96), Expect = 1e-04
Identities = 30/92 (32%), Positives = 36/92 (39%), Gaps = 25/92 (27%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPV------GPASPLGPGFPIGP----------------- 83
P P+ F+P P+ P GP GP +GP P GP
Sbjct: 619 PPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQ 678
Query: 84 --MGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP P+GP+GP P G SGP G P P
Sbjct: 679 RHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGP 710
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/60 (38%), Positives = 25/60 (41%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P+ P GP GP LGP P G G P GP+G P P G G
Sbjct: 701 PQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQG 760
Score = 37.4 bits (85), Expect = 0.003
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 20/84 (23%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASP------LGPGFPIGPMGPGKPVG--------- 91
P P P + P+ P P G +GP P GP P G GP P G
Sbjct: 707 PQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQG 766
Query: 92 -----PKGPMLPLGPSGPVGPTSP 110
+GP++ L P G GP P
Sbjct: 767 IQGPVSQGPLMGLNPRGMQGPPGP 790
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/44 (43%), Positives = 20/44 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GP P P G MGP P +G P G GP GP P
Sbjct: 618 GPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGP 661
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 69 VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
+GP P G P GP G +GP+GP L G GP G P P P
Sbjct: 617 MGPPGPQGQFRPPGPQGQ---MGPQGPPLHQGGGGPQGFMGPQGPQGP 661
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV-GP 107
GP G S GP P G +GP G +GP P G P GP
Sbjct: 854 GPPGSQSQQGP--PQGSLGPPPQGGMQGPPGPQGQQNPARGP 893
Score = 25.8 bits (55), Expect = 7.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGP 101
G P G +GP G P GP G P +GP GP
Sbjct: 863 GPPQGSLGPPPQGGMQGPPGPQGQQNPA--RGPHPSQGP 899
>gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]
Length = 654
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/48 (56%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 62 PGSPWGP--VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP +GP P GP P GPMGP GPKG P+GP GP GP
Sbjct: 520 PG-PQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGP 566
Score = 48.1 bits (113), Expect = 1e-06
Identities = 30/64 (46%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGP-GFP-----IGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P I PG P GP GP P+GP G P GPMGP P GPKG G G G
Sbjct: 522 PQGPSIIGPPGPP-GPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPG 580
Query: 107 PTSP 110
P P
Sbjct: 581 PRGP 584
Score = 46.6 bits (109), Expect = 4e-06
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP GP S +GP P GP GP P+GP G P G GP+GP P P
Sbjct: 521 GPQGP-SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGP 566
Score = 44.3 bits (103), Expect = 2e-05
Identities = 24/50 (48%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G G P GP IGP GP P GP GPM P G GP G P+ P P
Sbjct: 515 GDSGMPGPQGPSI-IGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGP 563
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/56 (41%), Positives = 25/56 (44%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPF 114
P P P GP GP P G P G GP P GP GP G G +G P P+
Sbjct: 530 PPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPY 585
Score = 41.6 bits (96), Expect = 1e-04
Identities = 25/57 (43%), Positives = 25/57 (43%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P P P G GP GP P GP GP G KG M GP GP G
Sbjct: 530 PPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
Score = 40.0 bits (92), Expect = 4e-04
Identities = 24/69 (34%), Positives = 28/69 (40%)
Query: 38 GKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
G + + P P P P P+ P P G GP P GP P G G +G GP
Sbjct: 524 GPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRG 583
Query: 98 PLGPSGPVG 106
P G G G
Sbjct: 584 PYGLPGKDG 592
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 PRTPGSPWGPVGPASPLGP-GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP G GP G P P PGKP G +G M PLGP G G
Sbjct: 199 PPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKP-GEQGLMGPLGPPGQKG 246
Score = 31.2 bits (69), Expect = 0.18
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPF 114
P P GP G G GP PG+P GP+GP P G G G P F
Sbjct: 115 PSECNCPAGPPGKRGKRGRRGESGP--PGQP-GPQGPPGPKGDKGEQGDQGPRMVF 167
Score = 29.6 bits (65), Expect = 0.54
Identities = 13/29 (44%), Positives = 13/29 (44%)
Query: 82 GPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G P GP GP P GP G G P
Sbjct: 189 GDQGQAGPPGPPGPPGPRGPPGDTGKDGP 217
Score = 28.9 bits (63), Expect = 0.91
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 12/67 (17%)
Query: 55 QPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGK-----------PVGPKGPMLPLGPSG 103
+P +P PG+ G G A P G G P PG P G KG G SG
Sbjct: 351 EPGLPGLPGTK-GERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSG 409
Query: 104 PVGPTSP 110
GP P
Sbjct: 410 AQGPRGP 416
Score = 28.5 bits (62), Expect = 1.2
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 30/102 (29%)
Query: 39 KTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPML- 97
K R++ P P P R G GP GP P GP G G +GP +
Sbjct: 107 KIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMV 166
Query: 98 -----------------------------PLGPSGPVGPTSP 110
P GP GP GP P
Sbjct: 167 FPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGP 208
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
P P P P R G GP P G PG P G P GP+G LG G
Sbjct: 557 PMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP-GPRGEKGDLGEKGEK 615
Query: 106 G 106
G
Sbjct: 616 G 616
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G P P GP G GP G G KG GP GP G
Sbjct: 376 GEPGAP-GPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPG 418
Score = 26.9 bits (58), Expect = 3.5
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
P PG P G G + GP G G G +GP P G G G T
Sbjct: 378 PGAPG-PKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGAT 426
Score = 26.6 bits (57), Expect = 4.5
Identities = 24/63 (38%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLG-PGFPIGP-----MGPGKPVGPKGPMLPLGPSG 103
P P P PR P G GP G PG P P MGP P G KG + G G
Sbjct: 196 PPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPG 255
Query: 104 PVG 106
G
Sbjct: 256 MNG 258
>gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens]
Length = 642
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/48 (56%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 62 PGSPWGP--VGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP +GP P GP P GPMGP GPKG P+GP GP GP
Sbjct: 520 PG-PQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGP 566
Score = 48.1 bits (113), Expect = 1e-06
Identities = 30/64 (46%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGP-GFP-----IGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P I PG P GP GP P+GP G P GPMGP P GPKG G G G
Sbjct: 522 PQGPSIIGPPGPP-GPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPG 580
Query: 107 PTSP 110
P P
Sbjct: 581 PRGP 584
Score = 46.6 bits (109), Expect = 4e-06
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP GP S +GP P GP GP P+GP G P G GP+GP P P
Sbjct: 521 GPQGP-SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGP 566
Score = 44.3 bits (103), Expect = 2e-05
Identities = 24/50 (48%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G G P GP IGP GP P GP GPM P G GP G P+ P P
Sbjct: 515 GDSGMPGPQGPSI-IGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGP 563
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/56 (41%), Positives = 25/56 (44%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPF 114
P P P GP GP P G P G GP P GP GP G G +G P P+
Sbjct: 530 PPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPY 585
Score = 41.6 bits (96), Expect = 1e-04
Identities = 25/57 (43%), Positives = 25/57 (43%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P P P G GP GP P GP GP G KG M GP GP G
Sbjct: 530 PPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
Score = 40.0 bits (92), Expect = 4e-04
Identities = 24/69 (34%), Positives = 28/69 (40%)
Query: 38 GKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
G + + P P P P P+ P P G GP P GP P G G +G GP
Sbjct: 524 GPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRG 583
Query: 98 PLGPSGPVG 106
P G G G
Sbjct: 584 PYGLPGKDG 592
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 PRTPGSPWGPVGPASPLGP-GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP G GP G P P PGKP G +G M PLGP G G
Sbjct: 199 PPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKP-GEQGLMGPLGPPGQKG 246
Score = 31.2 bits (69), Expect = 0.18
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPF 114
P P GP G G GP PG+P GP+GP P G G G P F
Sbjct: 115 PSECNCPAGPPGKRGKRGRRGESGP--PGQP-GPQGPPGPKGDKGEQGDQGPRMVF 167
Score = 29.6 bits (65), Expect = 0.54
Identities = 13/29 (44%), Positives = 13/29 (44%)
Query: 82 GPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G P GP GP P GP G G P
Sbjct: 189 GDQGQAGPPGPPGPPGPRGPPGDTGKDGP 217
Score = 28.9 bits (63), Expect = 0.91
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 12/67 (17%)
Query: 55 QPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGK-----------PVGPKGPMLPLGPSG 103
+P +P PG+ G G A P G G P PG P G KG G SG
Sbjct: 351 EPGLPGLPGTK-GERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSG 409
Query: 104 PVGPTSP 110
GP P
Sbjct: 410 AQGPRGP 416
Score = 28.5 bits (62), Expect = 1.2
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 30/102 (29%)
Query: 39 KTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPML- 97
K R++ P P P R G GP GP P GP G G +GP +
Sbjct: 107 KIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMV 166
Query: 98 -----------------------------PLGPSGPVGPTSP 110
P GP GP GP P
Sbjct: 167 FPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGP 208
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P P P P R G GP P G PG P G P GP+G LG G
Sbjct: 557 PMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP-GPRGEKGDLGEKG 613
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G P P GP G GP G G KG GP GP G
Sbjct: 376 GEPGAP-GPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPG 418
Score = 26.9 bits (58), Expect = 3.5
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
P PG P G G + GP G G G +GP P G G G T
Sbjct: 378 PGAPG-PKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGAT 426
Score = 26.6 bits (57), Expect = 4.5
Identities = 24/63 (38%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLG-PGFPIGP-----MGPGKPVGPKGPMLPLGPSG 103
P P P PR P G GP G PG P P MGP P G KG + G G
Sbjct: 196 PPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPG 255
Query: 104 PVG 106
G
Sbjct: 256 MNG 258
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/44 (52%), Positives = 25/44 (56%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G VGP P GP IGP+GP GP GP+ GP G GPT P
Sbjct: 128 GDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGP 171
Score = 45.4 bits (106), Expect = 9e-06
Identities = 26/46 (56%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLPLGPSGPVG 106
P P GP G PLGP GPMGP GKP GPKG P GP G G
Sbjct: 132 PTGPEGPRGNIGPLGPTGLPGPMGPIGKP-GPKGEAGPTGPQGEPG 176
Score = 41.6 bits (96), Expect = 1e-04
Identities = 25/70 (35%), Positives = 28/70 (40%)
Query: 39 KTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLP 98
K V P P PR PL P P GP+G P G P GP G G +G
Sbjct: 127 KGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGD 186
Query: 99 LGPSGPVGPT 108
G G +G T
Sbjct: 187 RGEKGKIGET 196
Score = 39.7 bits (91), Expect = 5e-04
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 63 GSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GSP GP G A P+G G GP G KG + P GP GP G PL P
Sbjct: 95 GSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGP 147
Score = 38.9 bits (89), Expect = 9e-04
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP G G P GP GP +GP GP GP GP+G P
Sbjct: 119 GPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGP 162
Score = 38.9 bits (89), Expect = 9e-04
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P G G +GP P GP G P+GP G P+GP G GP P P
Sbjct: 120 PQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGP 171
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/55 (36%), Positives = 24/55 (43%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P+ P G G GP G G P GP+GP +GP GP G P+ P
Sbjct: 102 PKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGP 156
Score = 38.5 bits (88), Expect = 0.001
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
G P G G +GP P GP+G + PLGP+G GP P+
Sbjct: 116 GETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPI 157
Score = 37.0 bits (84), Expect = 0.003
Identities = 21/50 (42%), Positives = 23/50 (46%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
GP+G G P G G VGP GP P G GP+GPT P P
Sbjct: 107 GPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGP 156
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/47 (40%), Positives = 19/47 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G G GP GPMG G GP G G VGPT P P
Sbjct: 92 GSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGP 138
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 9/59 (15%)
Query: 67 GPVGPASPLGPGFPIGPMGP---------GKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G G G P G GP P G KG +GP+GP GP + P P
Sbjct: 89 GDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGP 147
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/44 (52%), Positives = 25/44 (56%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G VGP P GP IGP+GP GP GP+ GP G GPT P
Sbjct: 128 GDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGP 171
Score = 45.4 bits (106), Expect = 9e-06
Identities = 26/46 (56%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLPLGPSGPVG 106
P P GP G PLGP GPMGP GKP GPKG P GP G G
Sbjct: 132 PTGPEGPRGNIGPLGPTGLPGPMGPIGKP-GPKGEAGPTGPQGEPG 176
Score = 41.6 bits (96), Expect = 1e-04
Identities = 25/70 (35%), Positives = 28/70 (40%)
Query: 39 KTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLP 98
K V P P PR PL P P GP+G P G P GP G G +G
Sbjct: 127 KGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGD 186
Query: 99 LGPSGPVGPT 108
G G +G T
Sbjct: 187 RGEKGKIGET 196
Score = 39.7 bits (91), Expect = 5e-04
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 63 GSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GSP GP G A P+G G GP G KG + P GP GP G PL P
Sbjct: 95 GSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGP 147
Score = 38.9 bits (89), Expect = 9e-04
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP G G P GP GP +GP GP GP GP+G P
Sbjct: 119 GPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGP 162
Score = 38.9 bits (89), Expect = 9e-04
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P G G +GP P GP G P+GP G P+GP G GP P P
Sbjct: 120 PQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGP 171
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/55 (36%), Positives = 24/55 (43%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P+ P G G GP G G P GP+GP +GP GP G P+ P
Sbjct: 102 PKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGP 156
Score = 38.5 bits (88), Expect = 0.001
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
G P G G +GP P GP+G + PLGP+G GP P+
Sbjct: 116 GETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPI 157
Score = 37.0 bits (84), Expect = 0.003
Identities = 21/50 (42%), Positives = 23/50 (46%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
GP+G G P G G VGP GP P G GP+GPT P P
Sbjct: 107 GPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGP 156
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/47 (40%), Positives = 19/47 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G G GP GPMG G GP G G VGPT P P
Sbjct: 92 GSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGP 138
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 9/59 (15%)
Query: 67 GPVGPASPLGPGFPIGPMGP---------GKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G G G P G GP P G KG +GP+GP GP + P P
Sbjct: 89 GDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGP 147
>gi|169175458 PREDICTED: similar to hCG2040468 [Homo sapiens]
Length = 376
Score = 48.9 bits (115), Expect = 9e-07
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPIGPMGPGKPVGPKGPM 96
T P+ P + P PL P P GP PL GP P+ GP P+ GP+
Sbjct: 32 TDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPL 91
Query: 97 LPLGPSGPVGP---TSPLFP 113
PL +GP+ P T PL P
Sbjct: 92 HPLTDTGPLHPLTDTGPLHP 111
Score = 48.9 bits (115), Expect = 9e-07
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPIGPMGPGKPVGPKGPM 96
T P+ P + P PL P P GP PL GP P+ GP P+ GP+
Sbjct: 41 TDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPL 100
Query: 97 LPLGPSGPVGP---TSPLFP 113
PL +GP+ P T PL P
Sbjct: 101 HPLTDTGPLHPLTDTGPLHP 120
Score = 48.9 bits (115), Expect = 9e-07
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPIGPMGPGKPVGPKGPM 96
T P+ P + P PL P P GP PL GP P+ GP P+ GP+
Sbjct: 50 TDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPL 109
Query: 97 LPLGPSGPVGP---TSPLFP 113
PL +GP+ P T PL P
Sbjct: 110 HPLTDTGPLHPLTDTGPLHP 129
Score = 48.9 bits (115), Expect = 9e-07
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPIGPMGPGKPVGPKGPM 96
T P+ P + P PL P P GP PL GP P+ GP P+ GP+
Sbjct: 59 TDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPL 118
Query: 97 LPLGPSGPVGP---TSPLFP 113
PL +GP+ P T PL P
Sbjct: 119 HPLTDTGPLHPLTDTGPLHP 138
Score = 48.9 bits (115), Expect = 9e-07
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPIGPMGPGKPVGPKGPM 96
T P+ P + P PL P P GP PL GP P+ GP P+ GP+
Sbjct: 68 TDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPL 127
Query: 97 LPLGPSGPVGP---TSPLFP 113
PL +GP+ P T PL P
Sbjct: 128 HPLTDTGPLHPLTDTGPLHP 147
Score = 48.9 bits (115), Expect = 9e-07
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPIGPMGPGKPVGPKGPM 96
T P+ P + P PL P P GP PL GP P+ GP P+ GP+
Sbjct: 77 TDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPL 136
Query: 97 LPLGPSGPVGP---TSPLFP 113
PL +GP+ P T PL P
Sbjct: 137 HPLTDTGPLHPLTDTGPLHP 156
Score = 47.8 bits (112), Expect = 2e-06
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPIGPMGPGKPVGPKGPMLPLG 100
P+ P + P PL P P GP PL GP P+ GP P+ GP+ PL
Sbjct: 27 PLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLT 86
Query: 101 PSGPVGP---TSPLFP 113
+GP+ P T PL P
Sbjct: 87 DTGPLHPLTDTGPLHP 102
Score = 42.0 bits (97), Expect = 1e-04
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 55 QPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
+PL P T P P+ PL P GP+ P GP P+ GP P+ T PL P
Sbjct: 26 RPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHP 84
Score = 35.8 bits (81), Expect = 0.007
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 40 TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL---GPGFPI---GPMGPGKPVGPK 93
T P+ P + P PL P P GP PL GP P+ GP+ P GP
Sbjct: 95 TDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPLHPLTDTGPL 154
Query: 94 GPML 97
P+L
Sbjct: 155 HPLL 158
Score = 30.4 bits (67), Expect = 0.31
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 6/95 (6%)
Query: 15 NLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASP 74
+L+ + L S +P +A F +P+ + + G WGP GP
Sbjct: 173 SLLRALDAAELTSPHTPDEEAQFAGGAGNPV------DTAEASVGSLKGQIWGPAGPEGK 226
Query: 75 LGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
G + P P VG P+ P + P S
Sbjct: 227 WPAGLQVRPSVPLGYVGGPAPLTPRSDQEGIWPLS 261
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 48.9 bits (115), Expect = 9e-07
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGK-PVGPKGPMLPLGPSGPVGP 107
P +P P +P P GP GP P GPG P+GP P GP GP P GP P P
Sbjct: 450 PVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGP-APHGPPAPYAP 507
Score = 46.6 bits (109), Expect = 4e-06
Identities = 28/66 (42%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 57 LIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPS----GPVGPT--SP 110
LI G P P+GP P GP GP GP P GP PM P P+ GP GP P
Sbjct: 442 LIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGP 501
Query: 111 LFPFCP 116
P+ P
Sbjct: 502 PAPYAP 507
Score = 45.1 bits (105), Expect = 1e-05
Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKP-VGPKGPMLPLGPS 102
P+ P P P P P P GP GP +P+GP P P PG P P GP P P
Sbjct: 450 PVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNP-APYNPGPPGPAPHGPPAPYAPQ 508
Query: 103 G 103
G
Sbjct: 509 G 509
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 48.1 bits (113), Expect = 1e-06
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 49 SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIG-PMGPGKPVGPKGPMLP-----LGPS 102
+P +P P + +PG P GP G GP P G P PG+ +G +GP LP GPS
Sbjct: 1315 NPGTPGAPGLKGSPGLP-GPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPS 1373
Query: 103 GPVGPTSPL 111
GP GP PL
Sbjct: 1374 GPPGPRGPL 1382
Score = 44.3 bits (103), Expect = 2e-05
Identities = 31/76 (40%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 43 SPIFPFSPRSPFQPLIPRTPGSPW--GPVGP-ASPLGPGFPIGPMGPGKP-----VGPKG 94
+P P +P P +P G P GP GP P PG IG GPG P GP G
Sbjct: 1315 NPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSG 1374
Query: 95 PMLPLGPSGPVGPTSP 110
P P GP G GP P
Sbjct: 1375 PPGPRGPLGDPGPRGP 1390
Score = 42.0 bits (97), Expect = 1e-04
Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 22/74 (29%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGP----GFPIGPMGPGKPVGPKGPMLPLG--------- 100
P +P PGSP GP GP +GP GFP GP+G G +GP P G
Sbjct: 1455 PGLPGQPGSPGEQGPRGPPGAIGPKGDRGFP-GPLGEAGEKGERGPPGPAGSRGLPGVAG 1513
Query: 101 ------PSGPVGPT 108
P GP GPT
Sbjct: 1514 RPGAKGPEGPPGPT 1527
Score = 41.6 bits (96), Expect = 1e-04
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 24/85 (28%)
Query: 52 SPFQPLIPRTPGSPWGPVGPASPLG------------PGFP--------IGPMGPGKPVG 91
+P +P +P PGSP GP GP P G PG P GP GP +G
Sbjct: 1419 APGEPGLPGLPGSP-GPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIG 1477
Query: 92 PKGPML---PLGPSGPVGPTSPLFP 113
PKG PLG +G G P P
Sbjct: 1478 PKGDRGFPGPLGEAGEKGERGPPGP 1502
Score = 40.0 bits (92), Expect = 4e-04
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Query: 47 PFSPRSPFQPLI------PRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGP 95
P SP P P + P PG+P G GP +G P G G P G +G
Sbjct: 2376 PGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGI 2435
Query: 96 MLPLGPSGPVGPTSP 110
PLGP GP G P
Sbjct: 2436 PGPLGPPGPPGSVGP 2450
Score = 39.7 bits (91), Expect = 5e-04
Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 51 RSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
R P ++P PG P G G P+G GP G P G KG GP GPVGP
Sbjct: 1574 RGPPGLVLPGDPG-PKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGP 1629
Score = 39.3 bits (90), Expect = 7e-04
Identities = 23/51 (45%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 59 PRTP-GSPWGPVGPASPLGPGFP--IGPMGPGKPVGPKGPMLPLGPSGPVG 106
PR P G P P GPG P G GP P GP+GP+ GP GP G
Sbjct: 1342 PRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPG 1392
Score = 37.0 bits (84), Expect = 0.003
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 14/81 (17%)
Query: 50 PRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKP--------VGPKGPMLPL 99
P +P Q + PG P G GP+ P GP P+G GP P G KG
Sbjct: 1349 PGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGER 1408
Query: 100 GPSGP----VGPTSPLFPFCP 116
GP GP + P P P P
Sbjct: 1409 GPPGPGEGGIAPGEPGLPGLP 1429
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/44 (43%), Positives = 20/44 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GP P+G GP G GP GP P G G G T P
Sbjct: 2171 GPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGP 2214
Score = 35.8 bits (81), Expect = 0.007
Identities = 23/52 (44%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG P G G A P G GP GP PVG G P G G GP P P
Sbjct: 2152 PGLP-GERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGP 2202
Score = 35.8 bits (81), Expect = 0.007
Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
PR P P+ P G G A P GP P G G GP G L GP+G VG
Sbjct: 2172 PRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGL-TGPTGAVGLPG 2230
Query: 110 PLFP 113
P P
Sbjct: 2231 PPGP 2234
Score = 35.0 bits (79), Expect = 0.013
Identities = 19/47 (40%), Positives = 20/47 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P G G P GP P+G G P G G P GP GP G
Sbjct: 2158 RGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSG 2204
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
GP G GP P GP+G GP G GP+GP GP+
Sbjct: 2162 GPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPS 2203
Score = 33.9 bits (76), Expect = 0.028
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
PG G + P P PG P P GP PVGP G G S P P P P
Sbjct: 1411 PGPGEGGIAPGEPGLPGLPGSP-GPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSP 1464
Score = 33.1 bits (74), Expect = 0.048
Identities = 29/74 (39%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 44 PIFPFSPRSPFQPLIPR-TPGSPW-------GPVGPASPLGPGFP-IGPMGPGKP--VGP 92
P P PR P PR PG P G G P GPG I P PG P G
Sbjct: 1372 PSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGS 1431
Query: 93 KGPMLPLGPSGPVG 106
GP P+GP G G
Sbjct: 1432 PGPQGPVGPPGKKG 1445
Score = 32.7 bits (73), Expect = 0.063
Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 19/78 (24%)
Query: 58 IPRTPGSPW--GPVGPASPLG----------PGFPI-------GPMGPGKPVGPKGPMLP 98
+P G P GP GP P G PG P GP G VGP GP
Sbjct: 1508 LPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGA 1567
Query: 99 LGPSGPVGPTSPLFPFCP 116
G G GP + P P
Sbjct: 1568 TGVQGERGPPGLVLPGDP 1585
Score = 32.3 bits (72), Expect = 0.083
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 59 PRTPGSPW-------GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLP--LGPSGPVGPTS 109
P PG P GP G +GP P G G GP G +LP GP G G
Sbjct: 1536 PGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRG 1595
Query: 110 PL 111
P+
Sbjct: 1596 PI 1597
Score = 32.3 bits (72), Expect = 0.083
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG P GP G PIG G P G GP G G GP P+ P
Sbjct: 1582 PGDP----GPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGP 1629
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GP G + P G G GP PVGP+G +G G GP
Sbjct: 1604 GPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGP 1644
Score = 30.8 bits (68), Expect = 0.24
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Query: 62 PGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
PG P G G + G GP G G GP P G GPVGP FP P
Sbjct: 1847 PGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVP 1906
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P G GP P G GFP P G GPKG G G G
Sbjct: 1885 PQGPPGLPGPVGPPGQGFPGVPGG----TGPKGDRGETGSKGEQG 1925
Score = 30.4 bits (67), Expect = 0.31
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGK--------PVGPKGPM-LPLGPSGPVGPT 108
GP G + GP GP+G PG+ GP+GP L LG GP GP+
Sbjct: 1979 GPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPS 2030
Score = 30.4 bits (67), Expect = 0.31
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 78 GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GFP GP G GP GP +GP GP G
Sbjct: 2710 GFP-GPSGNDGSAGPPGPPGSVGPRGPEG 2737
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 9/54 (16%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPG-----KPVGPKGPMLPLGPSGPVGP 107
P PG+P GP P GP + GPG P G KG G +G GP
Sbjct: 2078 PGLPGTP----GPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGP 2127
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 67 GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G GP G PG P G G P G G P GP GPVG
Sbjct: 2141 GEPGPRGQDGNPGLP-GERGMAGPEGKPGLQGPRGPPGPVG 2180
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/58 (43%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 49 SPRSPFQPLIPRTPGSPW--GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSG 103
SP P Q PG+P G G G PG P P PG PVGPKG P G G
Sbjct: 2243 SPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG-PVGPKGEPGPTGAPG 2299
Score = 30.0 bits (66), Expect = 0.41
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P G P GP G GP P G +GP P G +G GP G +P P P
Sbjct: 2706 PGIGGFP-GPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAP 2762
Score = 29.6 bits (65), Expect = 0.54
Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 29/71 (40%)
Query: 67 GPVGPASPLG-PGF--------PIGPMG----------PGKP----------VGPKGPML 97
GP GPA G PG P GP G PG+P GPKG
Sbjct: 1498 GPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKG 1557
Query: 98 PLGPSGPVGPT 108
+GP+GP G T
Sbjct: 1558 DVGPAGPRGAT 1568
Score = 29.6 bits (65), Expect = 0.54
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G P P P GP P+GP G VG KG P G G G
Sbjct: 1606 PGDSGPPGEKGDPGRP-GPPGPVGPRGRDGEVGEKGDEGPPGDPGLPG 1652
Score = 29.6 bits (65), Expect = 0.54
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 50 PRSPF-QPLIPRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
PR P P +P PG GP GP G P G G P G G G G
Sbjct: 1729 PRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPG 1788
Query: 104 PVGPTSP 110
GP+ P
Sbjct: 1789 AAGPSGP 1795
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/49 (36%), Positives = 19/49 (38%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G GP G P+GP GP VGP G G G G P
Sbjct: 2420 PSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLP 2468
Score = 29.3 bits (64), Expect = 0.70
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 60 RTPGSPWGPVGPASPLGP-GFP-----------IGPMGP-GKPVGPKGPMLPLGPSGPVG 106
R P G GP GP GFP GP GP G +G +GP GPSG G
Sbjct: 1978 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPP---GPSGLAG 2034
Query: 107 -PTSPLFPFCP 116
P P P P
Sbjct: 2035 EPGKPGIPGLP 2045
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P +P IP PG G VG A G G G G GP G GP GP P
Sbjct: 2036 PGKPGIPGLPGRAGG-VGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGP 2092
Score = 28.9 bits (63), Expect = 0.91
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 19/74 (25%)
Query: 55 QPLIPRTPGSPW--GPVGPASPLGPGFPIGPMG----------------PGKPVGPKGPM 96
+P +P G+P G +GP G GP G PG P G G
Sbjct: 2663 EPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPG-PSGNDGSA 2721
Query: 97 LPLGPSGPVGPTSP 110
P GP G VGP P
Sbjct: 2722 GPPGPPGSVGPRGP 2735
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 11/59 (18%)
Query: 60 RTPGSPW--GPVGPASPLG-PGFPIGP--------MGPGKPVGPKGPMLPLGPSGPVGP 107
R G P G GP P G PG P P GP P G G P G G GP
Sbjct: 1716 REKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGP 1774
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GP G G P GP G PVGP G P G G GP
Sbjct: 1872 GPKGERGAPGILGPQGPPGLPGPVGPPGQGFP-GVPGGTGP 1911
Score = 28.1 bits (61), Expect = 1.6
Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 22/68 (32%)
Query: 62 PGSPWGPVGPASPLG-PGFP--IGPMGP----------------GKPVGPKGPMLP--LG 100
PG P GP G P G PG P +G G G P P P LP +G
Sbjct: 2229 PGPP-GPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVG 2287
Query: 101 PSGPVGPT 108
P G GPT
Sbjct: 2288 PKGEPGPT 2295
Score = 27.7 bits (60), Expect = 2.0
Identities = 18/47 (38%), Positives = 18/47 (38%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P P G G P G GP G G G GPSGP G
Sbjct: 1751 RGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNG 1797
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLP--LGPSGPVGPT 108
P G G LGP P G GP P G P +P GP G G T
Sbjct: 1873 PKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGET 1918
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 59 PRTPGSPWGPVGPA---SPLGPGFPIGPMG-PGKP--VGPKGPMLPLGPSGPVG 106
P PG P GPVGP +G GP G PG P G +G G GPVG
Sbjct: 1618 PGRPGPP-GPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVG 1670
Score = 26.6 bits (57), Expect = 4.5
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKG-PMLPLGPSGPVG 106
P G P P GP P+GP G +G GP G P LP G +G G
Sbjct: 1612 PGEKGDPGRP-GPPGPVGPRGRDGEVGEKGDEGPPGDPGLP-GKAGERG 1658
Score = 26.6 bits (57), Expect = 4.5
Identities = 16/40 (40%), Positives = 16/40 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GPVG G G G GPKG GP GP G
Sbjct: 1667 GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPG 1706
Score = 26.6 bits (57), Expect = 4.5
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGP----KGPMLPLGPSGPVGPT-SPLFPFCP 116
GSP G GP G P GP G GP KG G GP GP P P P
Sbjct: 1685 GSP-GSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAP 1742
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G P G GP+ P G G G G +G GPSGP G
Sbjct: 1785 GKP-GAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPG 1827
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/47 (36%), Positives = 17/47 (36%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G GP G G G G GP G GP GP G P P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGP 2735
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 47.8 bits (112), Expect = 2e-06
Identities = 23/47 (48%), Positives = 26/47 (55%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GPVG A GP P+GP G G GP P+GP+G VGP P P
Sbjct: 955 GPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGP 1001
Score = 47.0 bits (110), Expect = 3e-06
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 15/56 (26%)
Query: 67 GPVGPASPLG----PGFP-----------IGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GPVGPA P+G PGFP +G GP P GP+G + G SGPVGP
Sbjct: 241 GPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGP 296
Score = 46.6 bits (109), Expect = 4e-06
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMG-------PGK--PVGPKGPMLPLGPSGPVGPTSPLFP 113
G+P G VGPA P GP P GP G PG P G +GP GP+GP GP P P
Sbjct: 1042 GAP-GSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGP 1100
Score = 46.2 bits (108), Expect = 6e-06
Identities = 28/58 (48%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 62 PGS--PWGPVGPASPLGP-------GFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PGS P GP GPA P GP G P G +GP GP+G P GP GP GP P
Sbjct: 1044 PGSVGPAGPRGPAGPSGPAGKDGRTGHP-GTVGPAGIRGPQGHQGPAGPPGPPGPPGP 1100
Score = 43.9 bits (102), Expect = 3e-05
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSP 110
G VGP P GP GP G PG P GPKG + +G +GP GP P
Sbjct: 238 GSVGPVGPAGPIGSAGPPGFPGAP-GPKGEIGAVGNAGPAGPAGP 281
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/58 (43%), Positives = 26/58 (44%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P+ P P GP GPA G G P G G G GP P G SGP GP P
Sbjct: 755 PTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGP 812
Score = 42.0 bits (97), Expect = 1e-04
Identities = 24/59 (40%), Positives = 27/59 (45%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
P P PR G VGPA P G P G G G +G P G +G VGPT P+
Sbjct: 701 PAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPV 759
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/65 (32%), Positives = 28/65 (43%)
Query: 42 VSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGP 101
+ P+ P P+ P G GP+ P+GP +GP GP P G +G G
Sbjct: 954 IGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGE 1013
Query: 102 SGPVG 106
GP G
Sbjct: 1014 KGPRG 1018
Score = 41.6 bits (96), Expect = 1e-04
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Query: 62 PGSPWGPVGPASPLG-------PGF--PIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLF 112
P P GP GP+ P G PG P G GP GP GP P GP GP G + +
Sbjct: 1049 PAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGPPGVSGGGY 1108
Query: 113 PF 114
F
Sbjct: 1109 DF 1110
Score = 41.2 bits (95), Expect = 2e-04
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 42 VSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGP 101
V P+ P P P P PG+P GP G +G P GP GP VG G P+GP
Sbjct: 240 VGPVGPAGPIGSAGP--PGFPGAP-GPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGP 296
Query: 102 SGPVG 106
G G
Sbjct: 297 PGNPG 301
Score = 40.8 bits (94), Expect = 2e-04
Identities = 20/50 (40%), Positives = 23/50 (46%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G +GP G P GP+GP G +G P GP GP G P P P
Sbjct: 952 GNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGP 1001
Score = 40.4 bits (93), Expect = 3e-04
Identities = 22/61 (36%), Positives = 27/61 (44%)
Query: 48 FSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
F P P R P G GP P+G P GP GP G G + +G +GP GP
Sbjct: 579 FGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP 638
Query: 108 T 108
+
Sbjct: 639 S 639
Score = 40.4 bits (93), Expect = 3e-04
Identities = 23/55 (41%), Positives = 25/55 (45%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PR P G G A P GP GP GP P G KG +G G GP+ P
Sbjct: 584 PAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP 638
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 47 PFSPRSPFQPLIPRTPGSP------------WGPVGPASPLGPGFPIGPMGPGKPVGPKG 94
P P P P R G P GP GP+ GP P GP G GP+G
Sbjct: 764 PAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRG 823
Query: 95 PMLPLGPSGPVGPTSP 110
P+G +G VG P
Sbjct: 824 DQGPVGRTGEVGAVGP 839
Score = 40.4 bits (93), Expect = 3e-04
Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 62 PGSPWGPVGPASP------LGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG P GPVGPA GP P+GP G P GP GP G G G P
Sbjct: 963 PG-PHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGP 1016
Score = 40.0 bits (92), Expect = 4e-04
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
GP G +GP P+G GP P GP GP G GP G T
Sbjct: 745 GPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMT 786
Score = 39.7 bits (91), Expect = 5e-04
Identities = 22/55 (40%), Positives = 23/55 (41%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P GP G + GP PIG GP P GP G G G VG P P
Sbjct: 584 PAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP 638
Score = 39.7 bits (91), Expect = 5e-04
Identities = 31/99 (31%), Positives = 33/99 (33%), Gaps = 39/99 (39%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-------PGK----------- 88
P P P R P GPVGPA +GP P GP G PG+
Sbjct: 965 PHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKG 1024
Query: 89 ---------------------PVGPKGPMLPLGPSGPVG 106
VGP GP P GPSGP G
Sbjct: 1025 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAG 1063
Score = 39.7 bits (91), Expect = 5e-04
Identities = 23/57 (40%), Positives = 23/57 (40%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P PR P P P G G P G P G GP P GP GP P G SG
Sbjct: 1049 PAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGPPGVSG 1105
Score = 39.3 bits (90), Expect = 7e-04
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGP----GFP--IGPMGPGKPVGPKGPMLPLGPSG 103
P P P P P GP G GP GFP G GP P G GP P GP+G
Sbjct: 755 PTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAG 814
Query: 104 PVGPTSP 110
G P
Sbjct: 815 KEGLRGP 821
Score = 38.9 bits (89), Expect = 9e-04
Identities = 19/41 (46%), Positives = 20/41 (48%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
G G P GP GP G GP GP+ GPSGP GP
Sbjct: 577 GEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGP 617
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 24/74 (32%)
Query: 67 GPVGPASPLGP-GFP-----IGPMGP----------GKP--------VGPKGPMLPLGPS 102
G GPA P GP G P +GP GP G+P GPKG +GP+
Sbjct: 697 GAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPT 756
Query: 103 GPVGPTSPLFPFCP 116
GPVG P P P
Sbjct: 757 GPVGAAGPAGPNGP 770
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/40 (47%), Positives = 19/40 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP G P G P GP G GP GP P GP GP G
Sbjct: 33 GPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPG 72
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 62 PGSPW-----GPVGPASPLG-PGFP--IGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
PG P GP GPA +G PG G G P GP+G P G SG GPT P+
Sbjct: 549 PGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPI 606
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/60 (38%), Positives = 24/60 (40%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P PR P P GP+G P GP P G G VG G P GPSG G
Sbjct: 584 PAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPG 643
Score = 37.4 bits (85), Expect = 0.003
Identities = 19/38 (50%), Positives = 19/38 (50%)
Query: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GPA GP GP GP G GP P GP GP GP
Sbjct: 33 GPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGP 70
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/55 (38%), Positives = 22/55 (40%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P P G GP G P GP+G P GP GP G G VG P P
Sbjct: 584 PAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP 638
Score = 37.0 bits (84), Expect = 0.003
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P +P +P P G+P G G G +G GP G G + P+GP+GP+G
Sbjct: 192 PGAPGVKGEPGAPGENGTP-GQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIG 250
Query: 107 PTSPL-FPFCP 116
P FP P
Sbjct: 251 SAGPPGFPGAP 261
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G+P GP G G GP GP P G G +GP+GP G P
Sbjct: 678 PGAVGAP-GPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP 728
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/41 (43%), Positives = 19/41 (46%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
G GP G P GP+G P GP GP P G G GP
Sbjct: 742 GAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGP 782
Score = 36.6 bits (83), Expect = 0.004
Identities = 25/68 (36%), Positives = 26/68 (38%), Gaps = 13/68 (19%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGP-------------KGPMLPLGPS 102
P R P GP GP G P GP GP P GP KG L GP
Sbjct: 34 PAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPM 93
Query: 103 GPVGPTSP 110
G +GP P
Sbjct: 94 GLMGPRGP 101
Score = 36.6 bits (83), Expect = 0.004
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG+ G G P G +GP GP GP GP P GP+G G P
Sbjct: 735 PGAK-GERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGP 782
Score = 36.2 bits (82), Expect = 0.006
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 62 PGSPWGPVGPASPLGP-GFP--IGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
PGSP G +GPA GP G P G GP P G +G +G GP GPT
Sbjct: 453 PGSP-GNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPT 501
Score = 35.8 bits (81), Expect = 0.007
Identities = 22/53 (41%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVG----PKGPMLPLGPSGPVGPTSP 110
P P GP GP P G G GK VG P G M P GP G G P
Sbjct: 58 PTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGP 110
Score = 35.8 bits (81), Expect = 0.007
Identities = 23/70 (32%), Positives = 27/70 (38%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
R P P P P P GP G P+G +G +GP G KGP G
Sbjct: 794 RTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAG 853
Query: 101 PSGPVGPTSP 110
+GP G P
Sbjct: 854 TAGPPGTPGP 863
Score = 35.4 bits (80), Expect = 0.010
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG P G +GP P G GP G P G G GP+G GP P
Sbjct: 90 PG-PMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGP 137
Score = 35.4 bits (80), Expect = 0.010
Identities = 18/40 (45%), Positives = 19/40 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G A P GP P G G VGP GP GP+G G
Sbjct: 694 GEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG 733
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P +P G P GPVG A G +G GP G G G +GP GP P
Sbjct: 321 PGLPGPRGIP-GPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGP 374
Score = 33.9 bits (76), Expect = 0.028
Identities = 30/88 (34%), Positives = 30/88 (34%), Gaps = 23/88 (26%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPG-----SPWGPVGPASPLGP----------------GF 79
R P PR P P PG P GP GP P GP G
Sbjct: 31 RKGPAGDRGPRGERGP--PGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGL 88
Query: 80 PIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GPMG P GP G GP G GP
Sbjct: 89 GPGPMGLMGPRGPPGAAGAPGPQGFQGP 116
Score = 33.9 bits (76), Expect = 0.028
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 65 PWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVG 106
P GP G A GP GP G PG+P G GP GP+GP G
Sbjct: 98 PRGPPGAAGAPGPQGFQGPAGEPGEP-GQTGPAGARGPAGPPG 139
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG P G G + G GP GP P G +G P G +G GP P
Sbjct: 348 PG-PAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGP 395
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/46 (39%), Positives = 20/46 (43%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
+ + P GP G P GP G GP P GP GP P G G
Sbjct: 30 VRKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGG 75
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 76 GPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP GP G P GP G GP+GP GP P P
Sbjct: 33 GPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGP 70
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 58 IPRTPGSPWGPVGPASPLGP----GFPIGPMGP-GKP-----------VGPKGPMLPLGP 101
+P G P GP+GPA G GFP GP GP G P G +G P G
Sbjct: 470 LPGIDGRP-GPIGPAGARGEPGNIGFP-GPKGPTGDPGKNGDKGHAGLAGARGAPGPDGN 527
Query: 102 SGPVGPTSP 110
+G GP P
Sbjct: 528 NGAQGPPGP 536
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/48 (37%), Positives = 20/48 (41%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PR P G GP GP G G P G +GP P G +G G
Sbjct: 98 PRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDG 145
Score = 31.2 bits (69), Expect = 0.18
Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPS 102
P+ PR P P G+P GP G P G PG P G GP GP GP G
Sbjct: 92 PMGLMGPRGP-----PGAAGAP-GPQGFQGPAGEPGEP-GQTGPAGARGPAGPPGKAGED 144
Query: 103 GPVG 106
G G
Sbjct: 145 GHPG 148
Score = 31.2 bits (69), Expect = 0.18
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G P GP G G G GP P GP G GP+G G P P
Sbjct: 346 GEP-GPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGP 395
Score = 31.2 bits (69), Expect = 0.18
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 67 GPVGPASPLG----PGFP--IGPMG-PGKP--VGPKGPMLPLGPSGPVGPTSPLFP 113
GP G P G PG P +GP G PG P +GP G P+G G G P+ P
Sbjct: 427 GPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGP 482
Score = 30.8 bits (68), Expect = 0.24
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G P G GP P GP G GP G GP P G G G
Sbjct: 361 GEP-GSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPG 403
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PGS GP GP P G GP G GP GP G G G
Sbjct: 363 PGSA-GPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRG 406
Score = 30.4 bits (67), Expect = 0.31
Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM----LPLGPSGPVG 106
G+P GP G GP P G G GP GP LP GPSGP G
Sbjct: 520 GAP-GPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLP-GPSGPAG 565
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G GP P G G GP P G +G P GP+G VG
Sbjct: 529 GAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVG 568
Score = 30.4 bits (67), Expect = 0.31
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 60 RTPGSPWGPVGPASPLG----PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P GPVG +G PGF G GP G GP GP G +G
Sbjct: 819 RGPRGDQGPVGRTGEVGAVGPPGFA-GEKGPSGEAGTAGPPGTPGPQGLLG 868
Score = 30.4 bits (67), Expect = 0.31
Identities = 16/44 (36%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G G +GP GP P GP GP G +G G P
Sbjct: 1033 GIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGP 1076
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
GP GP +GP P G G P G +GP G G GP P P
Sbjct: 89 GP-GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGP 137
Score = 29.6 bits (65), Expect = 0.54
Identities = 16/40 (40%), Positives = 16/40 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G GP P GP G GP G GP GP G
Sbjct: 358 GNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPG 397
Score = 29.6 bits (65), Expect = 0.54
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 15/67 (22%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGP----GKP-----------VGPKGPMLPLGPSG 103
P+ P P G G P G GP GP G P G GP G SG
Sbjct: 368 PQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASG 427
Query: 104 PVGPTSP 110
P G P
Sbjct: 428 PAGVRGP 434
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 67 GPVGPASPLGPGFPIGPMG----PGKP--VGPKG-PMLP--LGPSGPVGP 107
GP G GP GP G PG+P +GP+G P P +GP+G GP
Sbjct: 418 GPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGP 467
Score = 29.3 bits (64), Expect = 0.70
Identities = 16/47 (34%), Positives = 16/47 (34%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G G GP G G GP GP P G G G P P
Sbjct: 676 GAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGP 722
Score = 28.9 bits (63), Expect = 0.91
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G GP G P GP G G +GP P G G GP+ P
Sbjct: 520 GAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGP 563
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 10/52 (19%)
Query: 67 GPVGPASPLG-PGFPIGPMGPGKPVGPKGPM-------LPLGPSGPVGPTSP 110
G GP P G G P GP GP VG G LP GP+GP G P
Sbjct: 544 GEQGPPGPPGFQGLP-GPSGPAGEVGKPGERGLHGEFGLP-GPAGPRGERGP 593
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 13/60 (21%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-------PGKPVGPKGPMLPLGPSGPVG-PTSPLFP 113
PG P G P G P GP G PGKP G G +GP G G P +P P
Sbjct: 120 PGEP----GQTGPAGARGPAGPPGKAGEDGHPGKP-GRPGERGVVGPQGARGFPGTPGLP 174
Score = 28.1 bits (61), Expect = 1.6
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 30 SPTVKALFGKT-RVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGP-GFPIGPMGPG 87
SP + L G R + P R P R P G G +GP G P P G
Sbjct: 401 SPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIG 460
Query: 88 KPVGPKGPM-LP--LGPSGPVGP 107
P G +GP+ LP G GP+GP
Sbjct: 461 -PAGKEGPVGLPGIDGRPGPIGP 482
Score = 27.7 bits (60), Expect = 2.0
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
PG P + PG P G G G GP P GP G G + P P
Sbjct: 669 PGRDGARGAPGAVGAPG-PAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGP 722
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/47 (38%), Positives = 18/47 (38%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G G P G GP GP G KG P GP G G P P
Sbjct: 517 GARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGP 563
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/54 (33%), Positives = 20/54 (37%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P+ R P P GP G G +G GP P G G G G G
Sbjct: 602 PTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKG 655
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P TPG P G +G LG G G G G PLG +GP G P
Sbjct: 858 PGTPG-PQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGP 908
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/46 (36%), Positives = 18/46 (39%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P G G P GP +G G G G P GP G GP
Sbjct: 548 PPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGP 593
Score = 26.6 bits (57), Expect = 4.5
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 44 PIFPFSPRSPFQPLIPR-TPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
P P R P P P G P G VG A P GP G G G KG G
Sbjct: 602 PTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPG 661
Query: 101 PSGPVG 106
G +G
Sbjct: 662 LRGEIG 667
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
G+P P PG G G +GP G GP GPVGP
Sbjct: 928 GNPGNDGPPGRDGQPGHK-GERGYPGNIGPVGAAGAPGPHGPVGP 971
Score = 26.2 bits (56), Expect = 5.9
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 15/64 (23%)
Query: 58 IPRTPGSPWGPVGPASPLGP-------------GFPIGPMGPGKPVGPKGPMLPLGPSGP 104
+P G+P P GP GP G P GP G G KG GP GP
Sbjct: 314 LPGVAGAPGLP-GPRGIPGPVGAAGATGARGLVGEP-GPAGSKGESGNKGEPGSAGPQGP 371
Query: 105 VGPT 108
GP+
Sbjct: 372 PGPS 375
Score = 26.2 bits (56), Expect = 5.9
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G GP G GP P G +G GP GP G
Sbjct: 514 GLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPG 553
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G +G G G +G P G G G +GP GP P
Sbjct: 664 GEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGP 707
Score = 25.8 bits (55), Expect = 7.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G VG PLG P G GP VG G G +G G
Sbjct: 889 GAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 928
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 47.8 bits (112), Expect = 2e-06
Identities = 26/55 (47%), Positives = 26/55 (47%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PR P P GP G GP PIGP G VG GP P G GP GP P
Sbjct: 1171 PFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGP 1225
Score = 45.4 bits (106), Expect = 9e-06
Identities = 26/59 (44%), Positives = 27/59 (45%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
PF P P P P G G PLGP P G G GP+GP GP GP GP L
Sbjct: 1171 PFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHL 1229
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/52 (42%), Positives = 25/52 (48%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P GP GP P G GP+GP P G +G + GP GP G P P
Sbjct: 1171 PFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGP 1222
Score = 43.1 bits (100), Expect = 5e-05
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP G +GP G GP PVGP G P+G GP GP
Sbjct: 1007 PGLP-GPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGP 1051
Score = 42.7 bits (99), Expect = 6e-05
Identities = 22/58 (37%), Positives = 25/58 (43%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P P G G P GP P GP+GP G GP+ P+GP G G P P
Sbjct: 1156 PPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGP 1213
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 62 PGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PGS P GP GP G GP GP G GPM P+G GP GP
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGP 259
Score = 41.2 bits (95), Expect = 2e-04
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P +P G+P GP G GP P+GP G PVG GP P G G G
Sbjct: 1007 PGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPG 1059
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/50 (44%), Positives = 24/50 (48%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G G P GP G G P GP+GP P+GPSG G PL P P
Sbjct: 1149 GLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGP 1198
Score = 39.7 bits (91), Expect = 5e-04
Identities = 24/54 (44%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 55 QPLIPRTPG--SPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
QP P PG GP G P G PIGP G GP+G +GP GPVG
Sbjct: 466 QPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVG 519
Score = 39.3 bits (90), Expect = 7e-04
Identities = 20/47 (42%), Positives = 21/47 (44%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G VGP P GP G G P GP G GP GP+G P P
Sbjct: 213 GSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGP 259
Score = 39.3 bits (90), Expect = 7e-04
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 62 PGSPWGPVGPAS-PLGPGFPIGP--MGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
PG P GP+GP P GFP P G P G +GP P G G GP P+
Sbjct: 362 PGKP-GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPV 413
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
P PG P G G A P G P G GP P G +G P G G VGP P+
Sbjct: 467 PGDPGVP-GFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPV 518
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ PR P G G A P GP G GP P+G +GP P G G G
Sbjct: 217 PVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDG 267
Score = 37.4 bits (85), Expect = 0.003
Identities = 25/61 (40%), Positives = 26/61 (42%), Gaps = 13/61 (21%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGKP--------VGPKGPMLPLGPSGPVG 106
P T G P G GP GP GP G PG P GPKG P G GP+G
Sbjct: 437 PGTSGPP-GSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIG 495
Query: 107 P 107
P
Sbjct: 496 P 496
Score = 37.4 bits (85), Expect = 0.003
Identities = 30/91 (32%), Positives = 33/91 (36%), Gaps = 25/91 (27%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----------------PGFP--------IG 82
P P P PG P GP GPA G PG P +G
Sbjct: 962 PGGPGDKGDPGEDGQPG-PDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVG 1020
Query: 83 PMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P G GP GP+ P G +GPVG P P
Sbjct: 1021 PTGATGDKGPPGPVGPPGSNGPVGEPGPEGP 1051
Score = 37.0 bits (84), Expect = 0.003
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 59 PRTPGSPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P G GP P+G PG P G +G G KGP G SGP G P
Sbjct: 397 PEGPQGQRGETGPPGPVGSPGLP-GAIGTDGTPGAKGPTGSPGTSGPPGSAGP 448
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P G+P G VGP+ P+GP G G P GP G GP GP G
Sbjct: 637 VPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPG 687
Score = 36.2 bits (82), Expect = 0.006
Identities = 25/53 (47%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PGS G VGP P G P GP+G PGK GP G G G VG P P
Sbjct: 911 PGSA-GRVGPPGPAGAPGPAGPLGEPGKE-GPPGLRGDPGSHGRVGDRGPAGP 961
Score = 35.8 bits (81), Expect = 0.007
Identities = 28/67 (41%), Positives = 31/67 (46%), Gaps = 12/67 (17%)
Query: 62 PGS-----PWGPVGPASPLGP-GFP-----IGPMGPGKPVGPKGPMLPLGPSGPVG-PTS 109
PGS P GP+G PLGP G P +GP G G G GP GP+G P S
Sbjct: 317 PGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGS 376
Query: 110 PLFPFCP 116
FP P
Sbjct: 377 SGFPGNP 383
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/42 (45%), Positives = 20/42 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
GP+GP P GP G GP VGP G G G GPT
Sbjct: 801 GPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPT 842
Score = 35.0 bits (79), Expect = 0.013
Identities = 31/89 (34%), Positives = 32/89 (35%), Gaps = 23/89 (25%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG-------PGFPIGPMG----------PGKP 89
P P PL PR G +GP G PG P GPMG PG P
Sbjct: 325 PTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP-GPMGPLGIPGSSGFPGNP 383
Query: 90 -----VGPKGPMLPLGPSGPVGPTSPLFP 113
GP G P GP G G T P P
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGP 412
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 11/72 (15%)
Query: 46 FPFSPRSPFQPLIPRTPG-----------SPWGPVGPASPLGPGFPIGPMGPGKPVGPKG 94
F SP + P P PG P G VG G P GPMG P+GP+G
Sbjct: 280 FAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRG 339
Query: 95 PMLPLGPSGPVG 106
G GP G
Sbjct: 340 MPGERGRLGPQG 351
Score = 34.3 bits (77), Expect = 0.022
Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Query: 52 SPFQPLIPRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
SP P PG P G G P G G G P GP G M PLGP G G
Sbjct: 283 SPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPG 342
Query: 107 PTSPLFP 113
L P
Sbjct: 343 ERGRLGP 349
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/52 (36%), Positives = 21/52 (40%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P P GP G GP +GP G G +G P G G GP P
Sbjct: 802 PLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGP 853
Score = 33.9 bits (76), Expect = 0.028
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG P G +GP P+GP G G +GP P G G GP P
Sbjct: 638 PGQRGAP-GKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGP 685
Score = 33.9 bits (76), Expect = 0.028
Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 62 PGSPWGPVGPASPLGPGFP--IGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG G P GFP G +GP P G GP PLG G GP
Sbjct: 893 PGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGP 940
Score = 33.9 bits (76), Expect = 0.028
Identities = 19/45 (42%), Positives = 21/45 (46%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P G GPA PLG GP G G G + GP+GP G
Sbjct: 919 PPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPG 963
Score = 33.5 bits (75), Expect = 0.037
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 12/56 (21%)
Query: 62 PGSPWGPVGPASPLG----PGFPIGPMGP----GKPV--GPKGPMLPLGPSGPVGP 107
PG P GP GPA P G PG P G +GP G P G GP +G +GP GP
Sbjct: 800 PG-PLGPPGPAGPTGEKGEPG-PRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGP 853
Score = 33.5 bits (75), Expect = 0.037
Identities = 20/52 (38%), Positives = 22/52 (42%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P GP GP G P G +GP G G GP+G VG P P
Sbjct: 802 PLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGP 853
Score = 33.5 bits (75), Expect = 0.037
Identities = 30/78 (38%), Positives = 31/78 (39%), Gaps = 14/78 (17%)
Query: 41 RVSPIFPFSPRSPFQPL----------IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPV 90
RV P P P PL + PGS G VG P GP P GP G P
Sbjct: 916 RVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSH-GRVGDRGPAGP--PGGPGDKGDP- 971
Query: 91 GPKGPMLPLGPSGPVGPT 108
G G P GP GP G T
Sbjct: 972 GEDGQPGPDGPPGPAGTT 989
Score = 33.1 bits (74), Expect = 0.048
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 17/75 (22%)
Query: 50 PRSPFQPLIPRTPGSPW--GPVGPASPLGP---------------GFPIGPMGPGKPVGP 92
P P QP P PG P GP G + P G G +GP P GP
Sbjct: 164 PGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGP 223
Query: 93 KGPMLPLGPSGPVGP 107
+G G +GP GP
Sbjct: 224 QGLQGQQGGAGPTGP 238
Score = 33.1 bits (74), Expect = 0.048
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 18/76 (23%)
Query: 53 PFQPL-IPRTPGSPWGP--VGPASPLGPGFPIGPMGPGKPVGPKGPM----LP------- 98
P PL IP + G P P G A P G P GP G GP GP+ LP
Sbjct: 367 PMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDG 426
Query: 99 ----LGPSGPVGPTSP 110
GP+G G + P
Sbjct: 427 TPGAKGPTGSPGTSGP 442
Score = 32.7 bits (73), Expect = 0.063
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 57 LIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM-------LPLGPSGPVGPTS 109
L+P G P GPA P G P G GP GP+GP +P P P P
Sbjct: 120 LVPVVTGIRGRP-GPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGH 178
Query: 110 PLFP 113
P P
Sbjct: 179 PSHP 182
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/45 (40%), Positives = 20/45 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G GP P+GP GP+G P GP G G G VG
Sbjct: 1021 PTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVG 1065
Score = 32.3 bits (72), Expect = 0.083
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 60 RTPGSPWGPVGPASPLGP-------GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P G VGP P+G GFP G G P G +G P+G SGP G
Sbjct: 503 RGPRGDPGTVGPPGPVGERGAPGNRGFP-GSDGLPGPKGAQGERGPVGSSGPKG 555
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G G P+GP GP P G KG P G GP G
Sbjct: 789 GTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPG 828
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
R P G VG A P GP G G PG+P G KG GP G G P P
Sbjct: 836 RGENGPTGAVGFAGPQGPDGQPGVKGEPGEP-GQKGDAGSPGPQGLAGSPGPHGP 889
Score = 32.0 bits (71), Expect = 0.11
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 47 PFSPRSPFQPLIPRTPGS-PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
P PR P Q L + G+ P GP G GP PIG GP P G G G +G
Sbjct: 217 PVGPRGP-QGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNP 275
Query: 106 G 106
G
Sbjct: 276 G 276
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/72 (36%), Positives = 26/72 (36%), Gaps = 13/72 (18%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGF-----------PIGPMGPGKPVGPKGP 95
P R P P R P GPVG SP PG P G G P G GP
Sbjct: 391 PTGARGPEGPQGQRGETGPPGPVG--SPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGP 448
Query: 96 MLPLGPSGPVGP 107
GP G GP
Sbjct: 449 PGSPGPQGSTGP 460
Score = 32.0 bits (71), Expect = 0.11
Identities = 27/77 (35%), Positives = 28/77 (36%), Gaps = 15/77 (19%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGP-------------GFPIGPMGPGKPVGPK 93
P P +P PG P G VGP P G G P G G GP
Sbjct: 683 PGPPGEGGKPGDQGVPGDP-GAVGPLGPRGERGNPGERGEPGITGLP-GEKGMAGGHGPD 740
Query: 94 GPMLPLGPSGPVGPTSP 110
GP GPSG G T P
Sbjct: 741 GPKGSPGPSGTPGDTGP 757
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P TPG P G G A G GP+GP G +G P GP G G
Sbjct: 1085 PGTPG-PVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKG 1131
Score = 31.6 bits (70), Expect = 0.14
Identities = 31/97 (31%), Positives = 33/97 (34%), Gaps = 33/97 (34%)
Query: 47 PFSPRSPFQPLIPRTP----GSPWGPVGPASPLGPGFPI--GPMG--------------- 85
P R P PR P G P P P +P PG P GP G
Sbjct: 142 PRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEK 201
Query: 86 ----------PGK--PVGPKGPMLPLGPSGPVGPTSP 110
PG PVGP+GP G G GPT P
Sbjct: 202 SGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGP 238
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/45 (40%), Positives = 19/45 (42%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G G GP P+G MGP P G G LGP G G
Sbjct: 310 PKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPG 354
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G PLGP P GP G GP+G + P G G G
Sbjct: 795 GARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPG 834
Score = 31.6 bits (70), Expect = 0.14
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
+V P + P P+ P PGS GPVG P GP G G VG +G G
Sbjct: 1018 KVGPTGATGDKGPPGPVGP--PGSN-GPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPG 1074
Query: 101 PSGPVG 106
P+G G
Sbjct: 1075 PAGLPG 1080
Score = 30.8 bits (68), Expect = 0.24
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 61 TPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKG-------PMLP-----LGPSGPVG 106
TPG+ P G G + P G P G GP GP+G P +P GP G G
Sbjct: 427 TPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPG 486
Query: 107 PTSPLFPFCP 116
P P P
Sbjct: 487 PHGIQGPIGP 496
Score = 30.8 bits (68), Expect = 0.24
Identities = 18/48 (37%), Positives = 20/48 (41%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ P G GP P G GP G VGP GP+ G G G
Sbjct: 481 PKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRG 528
Score = 30.8 bits (68), Expect = 0.24
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 59 PRTPGSPWGPVGP-ASPLGPGFP--IGPMGPGKPVGPKGPMLPLGPSGPVG-PTSPLFPF 114
P T G P GPVG +P GFP G GP G +GP+ GP G G P P P
Sbjct: 509 PGTVGPP-GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPG 567
Query: 115 CP 116
P
Sbjct: 568 LP 569
Score = 30.8 bits (68), Expect = 0.24
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKP--VGPKGPMLP------LGPSGPVGPT 108
+P GS P P G P PGK VGP GP+ P G GP GPT
Sbjct: 616 LPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPT 674
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/60 (35%), Positives = 22/60 (36%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P + P G VGP G G GP VG GP P G G G
Sbjct: 802 PLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKG 861
Score = 30.8 bits (68), Expect = 0.24
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGP-GFP--------IGPMGPGKPVGPKGPMLPLG 100
P P Q +PG P G G P GP G P GP G G G + P G
Sbjct: 863 PGEPGQKGDAGSPG-PQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPG 921
Query: 101 PSGPVGPTSPL 111
P+G GP PL
Sbjct: 922 PAGAPGPAGPL 932
Score = 30.8 bits (68), Expect = 0.24
Identities = 18/48 (37%), Positives = 20/48 (41%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P G G GP G G VGP GP GP+GP+G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLG 933
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GP P GPG P G+P GP GP P G +G G
Sbjct: 957 GPAGP--PGGPGDKGDPGEDGQP-GPDGPPGPAGTTGQRG 993
Score = 30.4 bits (67), Expect = 0.31
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
+P + G+P P GP G G G P+GP G G GP GP
Sbjct: 1078 LPGSQGAPGTP-GPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGP 1126
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 15/61 (24%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPK---------------GPMLPLGPSGPVGPTS 109
P GP G GP G +GP PVG + GP G GPVG +
Sbjct: 493 PIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSG 552
Query: 110 P 110
P
Sbjct: 553 P 553
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/46 (39%), Positives = 19/46 (41%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P GPVGP GP GP GP G G +G G G P
Sbjct: 1030 PPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGP 1075
Score = 30.0 bits (66), Expect = 0.41
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 62 PGSPWGPVGPASPLG----PGF--PIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG+P GPVG G PG PIGP G G GP P G G G
Sbjct: 1085 PGTP-GPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHG 1134
Score = 29.6 bits (65), Expect = 0.54
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 42 VSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLG 100
V P+ P P+ P P G G P+GP GP G PGKP G G G
Sbjct: 215 VGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKP-GEDGEPGRNG 273
Query: 101 PSGPVG----PTSPLFPFCP 116
G VG P + FP P
Sbjct: 274 NPGEVGFAGSPGARGFPGAP 293
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 12/56 (21%)
Query: 67 GPVGPASPLG-PGFPIGPMGPGKP-----------VGPKGPMLPLGPSGPVGPTSP 110
GPVG + P G G P P PG P GP+G + PLG G G P
Sbjct: 546 GPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGP 601
Score = 29.6 bits (65), Expect = 0.54
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 15/58 (25%)
Query: 65 PWGPVGPA---------SPLGP-GF-----PIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P GPVGP P GP GF P GP G G G +G G GP+GP
Sbjct: 652 PSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGP 709
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
I TPG G +G G G G P+GP GP P G G GP + P
Sbjct: 769 IAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGP 826
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG+ P G A +GP P G GP P+G G P G G G
Sbjct: 905 PGATGFP-GSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPG 948
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 63 GSPWGPVG-PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G P GP G P S PG P GP+G G +G GP GP G
Sbjct: 1071 GDP-GPAGLPGSQGAPGTP-GPVGAPGDAGQRGDPGSRGPIGPPG 1113
Score = 29.3 bits (64), Expect = 0.70
Identities = 25/56 (44%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 62 PGS--PWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSPLFPF 114
PGS P G GP GP P G G PG P P P P PS P GP PF
Sbjct: 137 PGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHP-GPDGLSRPF 191
Score = 29.3 bits (64), Expect = 0.70
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 52 SPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG-PTSP 110
SP P T G+P G P G GP G P G GP GP G G P P
Sbjct: 415 SPGLPGAIGTDGTP----GAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDP 470
Query: 111 LFP 113
P
Sbjct: 471 GVP 473
Score = 29.3 bits (64), Expect = 0.70
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 47 PFSPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGP 104
P P P P G+P GP G PLG G GP +G +G +G GP
Sbjct: 560 PGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGP 619
Query: 105 VG 106
G
Sbjct: 620 KG 621
Score = 29.3 bits (64), Expect = 0.70
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG----PGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P P GP G A G P GP G PG P GP G G G G + P P
Sbjct: 652 PSGPVGPPGLAGERGEQGPPGPTGFQGLPG-PPGPPGEGGKPGDQGVPGDPGAVGPLGP 709
Score = 29.3 bits (64), Expect = 0.70
Identities = 27/82 (32%), Positives = 27/82 (32%), Gaps = 28/82 (34%)
Query: 62 PGS--PWGPVGPASPLGPGFPIGPMG-------------------------PGKPVGPKG 94
PGS P GP G A G P GP G PG P GP G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPP-GPNG 1161
Query: 95 PMLPLGPSGPVGPTSPLFPFCP 116
G GP GP P P P
Sbjct: 1162 EQGSAGIPGPFGPRGPPGPVGP 1183
Score = 28.9 bits (63), Expect = 0.91
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 13/79 (16%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPA-SPLGPGFPIGPMGPGK-----------PVGPKGPML 97
P P + P G+P G VG A SP GFP P PG P G G
Sbjct: 260 PGKPGEDGEPGRNGNP-GEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPG 318
Query: 98 PLGPSGPVGPTSPLFPFCP 116
G +GP GP + P P
Sbjct: 319 SKGEAGPTGPMGAMGPLGP 337
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGP-GFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P + P GP G P GP G P PG+P P P P P GP G + P
Sbjct: 133 PAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHP-GPDGLSRP 190
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P + G P GP G + G G G G G +GPSGPVGP
Sbjct: 611 PGSMGLP-GPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP 658
Score = 27.7 bits (60), Expect = 2.0
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 15/61 (24%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGP----GKP-----------VGPKGPMLPLGPSGPVG 106
P P G G P G +GP GP G P GPKG GP G G
Sbjct: 493 PIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSG 552
Query: 107 P 107
P
Sbjct: 553 P 553
Score = 27.7 bits (60), Expect = 2.0
Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 62 PGSPWGPVG-PASPLGPGFPIGPMG----PGKP-----VGPKGPMLPLGPSGPVGPTSPL 111
PG P G +G P G P GP G PGKP G G G G VGP+ P+
Sbjct: 599 PGPP-GSIGIRGQPGSMGLP-GPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPV 656
Query: 112 FP 113
P
Sbjct: 657 GP 658
Score = 27.7 bits (60), Expect = 2.0
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVG 106
P P G GP P G G G G PG P G GP+ P G G G
Sbjct: 670 PPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDP-GAVGPLGPRGERGNPG 717
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 14/76 (18%)
Query: 55 QPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG--------- 103
QP + PG P G G P G GP GP G KG GP G
Sbjct: 856 QPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 915
Query: 104 ---PVGPTSPLFPFCP 116
P GP P P
Sbjct: 916 RVGPPGPAGAPGPAGP 931
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 49 SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
+P P + PG G G P G IG G G G GP GP GP
Sbjct: 751 TPGDTGPPGLQGMPGER-GIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPA 809
Query: 109 SP 110
P
Sbjct: 810 GP 811
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
P P +P +P G P G P G P+G G GP G + G G +G
Sbjct: 560 PGRPGEPGLPGARGLTGNP-GVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPG 618
Query: 110 P 110
P
Sbjct: 619 P 619
Score = 25.8 bits (55), Expect = 7.7
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 49 SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
+P +P I PG G G P GP GP G GP G G G G
Sbjct: 715 NPGERGEPGITGLPGEK-GMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTP 773
Query: 109 SP 110
P
Sbjct: 774 GP 775
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 47.4 bits (111), Expect = 2e-06
Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PGSP GP G +G P GP GP P GP G G GP+GP P
Sbjct: 1115 PGAPGSP-GPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGP 1165
Score = 46.2 bits (108), Expect = 6e-06
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 46 FPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
FP +P +P P P G +G P GP P+GP GP G G P+GP GP
Sbjct: 1111 FPGNPGAPGSP----GPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPR 1166
Query: 106 G 106
G
Sbjct: 1167 G 1167
Score = 45.1 bits (105), Expect = 1e-05
Identities = 26/55 (47%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P PG+P P GPA G GP GP PVGP GP G SG GP P P
Sbjct: 1112 PGNPGAPGSP-GPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGP 1165
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/54 (46%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 59 PRTPGSPWGPVG----PASPLGPGF--PIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP G P SP PG+ P G G P GP GP +GPSGP G
Sbjct: 175 PAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAG 228
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 49 SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
SP +P P P PG P GP G + G P GP G P G +G P GP G G T
Sbjct: 1039 SPGAPGAPGHPGPPG-PVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGET 1097
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG+P P GP P+GP G G P GP G P G G GP P
Sbjct: 1040 PGAPGAPGHP-GPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGP 1090
Score = 41.6 bits (96), Expect = 1e-04
Identities = 30/79 (37%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPAS------PLGPGFPIGPMGPGKPVGPKG 94
R P P PR QP + PG P P GPG P GP G GP+G
Sbjct: 562 RPGPPGPSGPRG--QPGVMGFPGPKGNDGAPGKNGERGGPGGPG-PQGPPGKNGETGPQG 618
Query: 95 PMLPLGPSGPVGPTSPLFP 113
P P GP G G T P P
Sbjct: 619 PPGPTGPGGDKGDTGPPGP 637
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 62 PGSPWGPVGPASPLG-PGFPIGP--MGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P GP GP G PG P P GP G GP P GP G +GP+ P
Sbjct: 175 PAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGP 226
Score = 41.2 bits (95), Expect = 2e-04
Identities = 21/44 (47%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G P GP GP P G GP GP P GP G GP GP G
Sbjct: 597 GGPGGP-GPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQG 639
Score = 40.4 bits (93), Expect = 3e-04
Identities = 24/54 (44%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 67 GPVGPASPLGP----GFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
GP GP P GP G P P PG GP G GPSGP GP + P P
Sbjct: 174 GPAGPPGPPGPPGTSGHPGSPGSPGYQ-GPPGEPGQAGPSGPPGPPGAIGPSGP 226
Score = 40.4 bits (93), Expect = 3e-04
Identities = 36/89 (40%), Positives = 38/89 (42%), Gaps = 21/89 (23%)
Query: 47 PFSPRSPFQPLIPRTPGSPW-----GPVGPASPLGP----GFPIGPMG----PGK----- 88
P SP P P PGS GP GP+ P G GFP GP G PGK
Sbjct: 539 PGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFP-GPKGNDGAPGKNGERG 597
Query: 89 -PVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
P GP GP P G +G GP P P P
Sbjct: 598 GPGGP-GPQGPPGKNGETGPQGPPGPTGP 625
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/61 (42%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 52 SPFQPLIPRTPGSPWGPVGPASPLG------PGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
SP P P PG P GPVGPA G P P G GP G GP P G G
Sbjct: 1039 SPGAPGAPGHPGPP-GPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGET 1097
Query: 106 G 106
G
Sbjct: 1098 G 1098
Score = 39.7 bits (91), Expect = 5e-04
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P +PGSP G GP G P GP GP +GP GP G SG G
Sbjct: 179 PGPPGPPGTSGHPGSPGSP-GYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPG 237
Score = 39.3 bits (90), Expect = 7e-04
Identities = 27/80 (33%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGP----------GFPIGPMGPGKPVGPKGPM 96
P P P R P GP G G GFP P PG P GP G
Sbjct: 1069 PAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSP-GPAGQQ 1127
Query: 97 LPLGPSGPVGPTSPLFPFCP 116
+G GP GP P+ P P
Sbjct: 1128 GAIGSPGPAGPRGPVGPSGP 1147
Score = 38.9 bits (89), Expect = 9e-04
Identities = 23/52 (44%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P GP G GP P GP GPG G GP P G G G P
Sbjct: 599 PGGPG-PQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGP 649
Score = 38.9 bits (89), Expect = 9e-04
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 58 IPRTPGSPWG---------PVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
+P GSP G P P +P PG P GP+GP G +G P GP+G GP
Sbjct: 1021 LPGRDGSPGGKGDRGENGSPGAPGAPGHPG-PPGPVGPAGKSGDRGESGPAGPAGAPGP 1078
Score = 38.5 bits (88), Expect = 0.001
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 38 GKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPV--GPKGP 95
GK P P P + P + PG G P G P GP G P GP+GP
Sbjct: 706 GKGAAGP--PGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGP 763
Query: 96 MLPLGPSGPVG 106
P+GP GP G
Sbjct: 764 TGPIGPPGPAG 774
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG P GP PG P GP GKP GP G G GP GP+ P
Sbjct: 524 PGRDGVPGGPGMRGMPGSPGGPGSDGKP-GPPGSQGESGRPGPPGPSGP 571
Score = 38.1 bits (87), Expect = 0.002
Identities = 33/97 (34%), Positives = 34/97 (35%), Gaps = 40/97 (41%)
Query: 53 PFQPLIPRTPGSPWGP-----------------VGPASPLGP-------GFP-------- 80
P P + PGSP GP GP P GP GFP
Sbjct: 530 PGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGA 589
Query: 81 -------IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GPG P GP G GP GP GPT P
Sbjct: 590 PGKNGERGGPGGPG-PQGPPGKNGETGPQGPPGPTGP 625
Score = 37.0 bits (84), Expect = 0.003
Identities = 30/80 (37%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 47 PFSPRSPFQPLIPRTPG--SPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM-------- 96
P P + P P +PG P G G A P GP P G +GP P G G
Sbjct: 182 PGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGE 241
Query: 97 --LPLGPSGPVGPTS-PLFP 113
LP GP G GP P FP
Sbjct: 242 RGLP-GPPGIKGPAGIPGFP 260
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
PR P P GP GPA G G G GP+G G +GP GP FP P
Sbjct: 760 PRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAG--FPGAP 815
Score = 35.8 bits (81), Expect = 0.007
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG P G G P P PG P GP GP+ P G SG G + P P
Sbjct: 1022 PGRDGSPGGKGDRGENGSPGAPGAPGHP-GPPGPVGPAGKSGDRGESGPAGP 1072
Score = 35.4 bits (80), Expect = 0.010
Identities = 28/66 (42%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 47 PFSPRSPFQPLIPRTPGSPW--GPVGPASPLG-PGFP--IGPMGPGKPVGPKGPMLPLGP 101
P P S P P GSP GP GPA G PG P GP G G KG GP
Sbjct: 881 PGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGP 940
Query: 102 SGPVGP 107
G GP
Sbjct: 941 PGAPGP 946
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GP P GPG G GP P G +G LP G GP G
Sbjct: 615 GPQGPPGPTGPGGDKGDTGPPGPQGLQG--LP-GTGGPPG 651
Score = 33.9 bits (76), Expect = 0.028
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 20/71 (28%)
Query: 62 PGSPWGPVGPASPLGP----------GFP-----IGPMGP----GKPVGPKGPMLPLGPS 102
P P G G A P GP G P +G GP G+P GP +P G
Sbjct: 700 PPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVP-GKD 758
Query: 103 GPVGPTSPLFP 113
GP GPT P+ P
Sbjct: 759 GPRGPTGPIGP 769
Score = 33.5 bits (75), Expect = 0.037
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 61 TPGSPW--GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
+PG P G G A G PGF GP GP G KGP G GP GP
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFR-GPAGPNGIPGEKGPAGERGAPGPAGP 517
Score = 33.5 bits (75), Expect = 0.037
Identities = 27/73 (36%), Positives = 29/73 (39%), Gaps = 17/73 (23%)
Query: 52 SPFQPLIPRTPGSPW--GPVGPASPLG-PGFP--------------IGPMGPGKPVGPKG 94
+P P I GSP G GP P G PG P G G G P G G
Sbjct: 784 APGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAG 843
Query: 95 PMLPLGPSGPVGP 107
P GP+GP GP
Sbjct: 844 PPGGSGPAGPPGP 856
Score = 32.7 bits (73), Expect = 0.063
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 49 SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKG-PMLPLGPSGPVGP 107
+P PF P P P P + GP P G GP G G P +P P P P
Sbjct: 76 NPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSP 135
Query: 108 TSP-LFPFCP 116
P + CP
Sbjct: 136 GPPGICESCP 145
Score = 32.7 bits (73), Expect = 0.063
Identities = 27/69 (39%), Positives = 28/69 (40%), Gaps = 17/69 (24%)
Query: 56 PLIPRTPGS--PWGPVGP-------ASPLGP---GFP-----IGPMGPGKPVGPKGPMLP 98
P + PG P GP GP SP GP GFP GP G GP GP
Sbjct: 839 PGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGS 898
Query: 99 LGPSGPVGP 107
G GP GP
Sbjct: 899 PGKDGPPGP 907
Score = 32.3 bits (72), Expect = 0.083
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGKPVGPKGPMLPLGPSGPVGPTS 109
P P G GPA G P GP G PG+ P GP + P P GP S
Sbjct: 493 PAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGS 547
Score = 32.3 bits (72), Expect = 0.083
Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 59 PRTPGSPWGPVGPASPLGP-------GFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G P G GPA P GP G P GP G P G +G P G +G GP P
Sbjct: 839 PGVAGPPGGS-GPAGPPGPQGVKGERGSPGGPGAAGFP-GARGLPGPPGSNGNPGPPGP 895
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 8/59 (13%)
Query: 62 PGSPWGPVG-------PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P GP G P P GFP G G P G G P GPSG G P P
Sbjct: 850 PAGPPGPQGVKGERGSPGGPGAAGFP-GARGLPGPPGSNGNPGPPGPSGSPGKDGPPGP 907
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 10/74 (13%)
Query: 43 SPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG----PGFPIGPMGPGKPVGPKGPMLP 98
+P PF P P P P GP P G PG P PG P P P P
Sbjct: 76 NPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSP 135
Query: 99 LGPSG-----PVGP 107
GP G P GP
Sbjct: 136 -GPPGICESCPTGP 148
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPM------GPGKPVGPKGPMLPLGPSGPVG-PTSP 110
P P GP GP G P GP G G P G G GP G G P +P
Sbjct: 616 PQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAP 671
Score = 31.6 bits (70), Expect = 0.14
Identities = 22/48 (45%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 63 GSPWGPVG----PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GSP GP G P P G P G GP P GP GP P G G G
Sbjct: 735 GSP-GPKGDKGEPGGPGADGVP-GKDGPRGPTGPIGPPGPAGQPGDKG 780
Score = 31.6 bits (70), Expect = 0.14
Identities = 31/98 (31%), Positives = 33/98 (33%), Gaps = 38/98 (38%)
Query: 50 PRSPFQPLIPRTP----------------------GSPWGPVGPASPLGP-GFPIGPMGP 86
PR P P+ P P GSP G G P GP GFP P
Sbjct: 760 PRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSP-GERGETGPPGPAGFPGAPGQN 818
Query: 87 GKP--------------VGPKGPMLPLGPSGPVGPTSP 110
G+P GP G P G SGP GP P
Sbjct: 819 GEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGP 856
Score = 31.2 bits (69), Expect = 0.18
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 50 PRSPFQPLIPRTPGSPW--GPVGPA-SPLGPGFP--IGPMGPGKPVGPKGPMLPLGPSGP 104
P P P PGSP G VGPA SP G P G GP G +GP P G +G
Sbjct: 332 PGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGS 391
Query: 105 VGPTSPLFP 113
G + P
Sbjct: 392 PGGKGEMGP 400
Score = 30.8 bits (68), Expect = 0.24
Identities = 32/94 (34%), Positives = 33/94 (35%), Gaps = 27/94 (28%)
Query: 47 PFSPRS-PFQPLIPRTPGSPWGPVGPASPLGPGFP----IGPMGP--------------- 86
P P+ P P IP G P P P SP PG P P GP
Sbjct: 104 PQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSG 163
Query: 87 ---GKPVGPKGPMLPLGPSGPVG----PTSPLFP 113
G G GP P GP GP G P SP P
Sbjct: 164 VAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSP 197
Score = 30.4 bits (67), Expect = 0.31
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 46 FPFSPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
FP +P +P G+P G GP GP GP GP P G KG
Sbjct: 811 FPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGER-----GS 865
Query: 104 PVGPTSPLFP 113
P GP + FP
Sbjct: 866 PGGPGAAGFP 875
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/48 (37%), Positives = 19/48 (39%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ GP GP G G MGP G G M GP GP G
Sbjct: 373 PQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAG 420
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 59 PRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P GSP GP G PLG G G P G GP GP G G
Sbjct: 929 PGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKG 978
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG+P GP+G A G GP G P G GP G SG G
Sbjct: 941 PGAP-GPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPG 984
Score = 28.9 bits (63), Expect = 0.91
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 14/76 (18%)
Query: 46 FPFSPRSPFQPLIPRTPGSPWGP-----VGPASPLGPGFPIGPMGPGKPVGPKGPMLP-- 98
FP SP + + +PGS P GP G P GP G G KG M P
Sbjct: 343 FPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAG 402
Query: 99 -------LGPSGPVGP 107
+G GP GP
Sbjct: 403 IPGAPGLMGARGPPGP 418
Score = 28.9 bits (63), Expect = 0.91
Identities = 23/52 (44%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 58 IPRTPG--SPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
IP PG GP GPA G PG G PGK G KG P G G G
Sbjct: 403 IPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKN-GAKGEPGPRGERGEAG 453
Score = 28.9 bits (63), Expect = 0.91
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 49 SPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
SP P +P G P G P GP G GP G GP P G +G G
Sbjct: 469 SPGEPGANGLPGAAGERGAP-GFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPG 525
Score = 28.9 bits (63), Expect = 0.91
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG-PVGPTSPLFPFCP 116
GP GP G P G G P GP+G G G P GP P P
Sbjct: 492 GPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSP 542
Score = 28.5 bits (62), Expect = 1.2
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 63 GSPWGPVGPASPLG-PGFP-----IGPMG-PGKPVGP--KGPMLPLGPSGPVGPTSP 110
G P GP GP G PG P +GP G PG P +G P G +G GP P
Sbjct: 330 GQP-GPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGP 385
Score = 28.5 bits (62), Expect = 1.2
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 13/61 (21%)
Query: 62 PGSPW--GPVGPASPLG----------PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
PGSP GP G A G PG P GP+G G +G P G GP G
Sbjct: 914 PGSPGVSGPKGDAGQPGEKGSPGAQGPPGAP-GPLGIAGITGARGLAGPPGMPGPRGSPG 972
Query: 110 P 110
P
Sbjct: 973 P 973
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 62 PGSPWGPVGPASP--LGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG+P G +P GP G G GP GP G +GP GP
Sbjct: 668 PGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGP 715
Score = 28.1 bits (61), Expect = 1.6
Identities = 26/78 (33%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGSPW--GPVGPA------SPLGPGFPIGPMGPGKPVGP 92
R SP P + P +P PGS GP GP+ P GP G G GP
Sbjct: 863 RGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGP 922
Query: 93 KGPMLPLGPSGPVGPTSP 110
KG G G G P
Sbjct: 923 KGDAGQPGEKGSPGAQGP 940
Score = 27.7 bits (60), Expect = 2.0
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Query: 58 IPRTPGSPWGPVGPASPLG----PGFP--IGPMGPGKPVGPKGPMLPLGPSGPVG-PTSP 110
+P G+P GP+GP G PG P G G G G P GP G G P SP
Sbjct: 289 LPGENGAP-GPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLF 112
P +P G+P P G PG GP G G +G P GP G G P
Sbjct: 656 PGEPGPKGDAGAPGAPGGKGDAGAPG-ERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPG 714
Query: 113 P 113
P
Sbjct: 715 P 715
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G+P G GP G G GP P G KG P GP G G
Sbjct: 678 GAP-GERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAG 720
Score = 26.2 bits (56), Expect = 5.9
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 53 PFQPLIPRTPGSPWGPVGPAS-PLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P I +PG G +GPA P PG +G GP P G G G +G G
Sbjct: 383 PGPPGINGSPGGK-GEMGPAGIPGAPGL-MGARGPPGPAGANGAPGLRGGAGEPG 435
Score = 26.2 bits (56), Expect = 5.9
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG----PGKPVGPKGPMLPLGPSGPV 105
P+ P P P GP GP G GP G PG+P GPKG G G
Sbjct: 616 PQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEP-GPKGDAGAPGAPGGK 674
Query: 106 G 106
G
Sbjct: 675 G 675
Score = 25.8 bits (55), Expect = 7.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP G A G GP GP G GP P G +G G
Sbjct: 684 GPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPG 723
Score = 25.8 bits (55), Expect = 7.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP G P G P G G G G GP GP G
Sbjct: 960 GPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQG 999
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 47.0 bits (110), Expect = 3e-06
Identities = 31/74 (41%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG----PGFPIGPMGPGKPVGPKGPMLPL 99
P P + P P P P GPVGP+ G PG PIGP GP G GP P
Sbjct: 1144 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPG-PIGPPGPRGRSGETGPAGPP 1202
Query: 100 GPSGPVGPTSPLFP 113
G GP GP P P
Sbjct: 1203 GNPGPPGPPGPPGP 1216
Score = 45.8 bits (107), Expect = 7e-06
Identities = 26/49 (53%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 59 PRTPGSPWGPVGPASPLGP-GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP GPA GP GF P PG+P G GPM P GP GP G
Sbjct: 202 PMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEP-GVSGPMGPRGPPGPPG 249
Score = 42.7 bits (99), Expect = 6e-05
Identities = 26/52 (50%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGK--PVGPKGPMLPLGPSGPVG-PTSP 110
P P GPVGPA GPGFP P G+ P G +GP GP G G P SP
Sbjct: 352 PAGPPGPVGPAG--GPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSP 401
Score = 42.0 bits (97), Expect = 1e-04
Identities = 28/67 (41%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 59 PRTPGSPWGPVGPASPLGP-------------GFP--IGPMGPGKPVGPKGPMLPLGPSG 103
P TPG+P GP GP P GP GF G G GP GPM P GP G
Sbjct: 155 PGTPGNP-GPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPG 213
Query: 104 PVGPTSP 110
P G P
Sbjct: 214 PAGAPGP 220
Score = 42.0 bits (97), Expect = 1e-04
Identities = 29/70 (41%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGP-GKP--------VGPKGPML 97
P + S P I PG P GP GP P G P+GP G G+P GPKG
Sbjct: 416 PGAKGSAGAPGIAGAPGFP-GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPG 474
Query: 98 PLGPSGPVGP 107
P GP G GP
Sbjct: 475 PAGPQGAPGP 484
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPS---GPVGPTSP 110
GP GP+ G P GP GP P GP GP G + GP+GP P
Sbjct: 1143 GPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGP 1189
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/53 (43%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P PGSP GP G G GPMGP P G +G P GP G G
Sbjct: 1067 PGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1119
Score = 40.8 bits (94), Expect = 2e-04
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 44 PIFPFSPRSPFQPLIPR----TPGSPWGPVGPASP------LGPGFPIGPMGPGKPVGPK 93
P P PR P P+ P G P GP+GP P GP P G GP P GP
Sbjct: 1156 PAGPSGPRGPPGPVGPSGKDGANGIP-GPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPP 1214
Query: 94 GPMLPLGPSGPVGP 107
GP + + +GP
Sbjct: 1215 GPGIDMSAFAGLGP 1228
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/59 (44%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT-SPLFPFCP 116
P GSP GP+GP G GP G G G P GP GPVGP P FP P
Sbjct: 314 PGENGSP-GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAP 371
Score = 40.4 bits (93), Expect = 3e-04
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G+P P P SP GP P G G G +GPM P GP+G G P P
Sbjct: 1065 GAPGAPGPPGSP-GPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1114
Score = 37.7 bits (86), Expect = 0.002
Identities = 26/58 (44%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 59 PRTPGSPWGPVGPA-SPLGPGFPIGPMGPGKP--VGPKGPMLPLGPSGPVGPTSPLFP 113
P TPGSP GP G + +P G P G P G G P GP GP G T PL P
Sbjct: 395 PGTPGSP-GPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGP 451
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/84 (34%), Positives = 31/84 (36%), Gaps = 15/84 (17%)
Query: 44 PIFPFSPRSPFQPL----------IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 93
P+ P PR P P P PG P G GP P GP P G G G
Sbjct: 202 PMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEP-GVSGPMGPRGPPGPPGKPGDDGEAGKP 260
Query: 94 GPMLPLGPSGPVG----PTSPLFP 113
G GP GP G P +P P
Sbjct: 261 GKAGERGPPGPQGARGFPGTPGLP 284
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/49 (40%), Positives = 22/49 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P GP G PLGP G G G +GP GP+GP G P
Sbjct: 436 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGP 484
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P GP GPA G +GP GP G +G G +GP GP
Sbjct: 790 PIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGP 832
Score = 37.0 bits (84), Expect = 0.003
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 27/76 (35%)
Query: 65 PWGPVGPASPLGPGFPIGPMG---------------------------PGKPVGPKGPML 97
P GP GPA G P GP G P P G +G
Sbjct: 1096 PMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASG 1155
Query: 98 PLGPSGPVGPTSPLFP 113
P GPSGP GP P+ P
Sbjct: 1156 PAGPSGPRGPPGPVGP 1171
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/45 (48%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSP 110
G GPA P GP P G G PG P G KG P G GP G P
Sbjct: 348 GQPGPAGPPGPVGPAGGPGFPGAP-GAKGEAGPTGARGPEGAQGP 391
Score = 36.2 bits (82), Expect = 0.006
Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 18/70 (25%)
Query: 59 PRTPGSPWGPVGPASPLG----PGF--------------PIGPMGPGKPVGPKGPMLPLG 100
PR P P G GP P G PG P GP G P G +G G
Sbjct: 436 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARG 495
Query: 101 PSGPVGPTSP 110
G VGP P
Sbjct: 496 EPGGVGPIGP 505
Score = 36.2 bits (82), Expect = 0.006
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP+GP P G G +GP P G G G G GP P
Sbjct: 789 GPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGP 832
Score = 36.2 bits (82), Expect = 0.006
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGP----GFP-----IGPMGPGKPVGPKGPMLPLG 100
P+ P P+ P GP G GP GFP +GP G GP GP P G
Sbjct: 865 PQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSG 924
Query: 101 PSGPVG 106
GP G
Sbjct: 925 KDGPKG 930
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/72 (38%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLP 98
RV P P S +P P P G P G G + P G G GP P G KG
Sbjct: 904 RVGP--PGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGD 961
Query: 99 LGPSGPVGPTSP 110
GPSG GP P
Sbjct: 962 DGPSGAEGPPGP 973
Score = 35.0 bits (79), Expect = 0.013
Identities = 31/100 (31%), Positives = 32/100 (32%), Gaps = 25/100 (25%)
Query: 39 KTRVSPIFPFSPRSPFQPLIPRTPGSPWGP-------------VGPASPLGPGFPIGPMG 85
K +SP PF P P T GP VGP P GP P G G
Sbjct: 73 KDCLSPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQG 132
Query: 86 PGKPVGPKGPMLPLGPSG------------PVGPTSPLFP 113
P G KG GP G P GP P P
Sbjct: 133 PRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGP 172
Score = 35.0 bits (79), Expect = 0.013
Identities = 25/59 (42%), Positives = 26/59 (44%), Gaps = 13/59 (22%)
Query: 59 PRTPGSPWGPVGPASPLGP-------GFPIGPMG----PGKPVGPKGPMLPLGPSGPVG 106
P+ P P GP G P G G P GP G PG P P GP P GP GP G
Sbjct: 118 PKGPPGPQGPAGEQGPRGDRGDKGEKGAP-GPRGRDGEPGTPGNP-GPPGPPGPPGPPG 174
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPK-GPMLPLGP--SGPVGPTSPLFP 113
GP G A G GP GP PVGP GP P P G GPT P
Sbjct: 336 GPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGP 385
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G P GP GP GP GPKG GP G G
Sbjct: 858 GDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATG 897
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 19/74 (25%)
Query: 58 IPRTPGSPWGPVGPASPLGP----------GFP--------IGPMGPGKPVGPKGPMLPL 99
+P TPG+ GP G + P GP G P GP G VG KGP
Sbjct: 721 LPGTPGTD-GPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAP 779
Query: 100 GPSGPVGPTSPLFP 113
G G G T P+ P
Sbjct: 780 GKDGGRGLTGPIGP 793
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 67 GPVG-PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G VG P +P PG P GP P G +G G GP+GP+ P
Sbjct: 1062 GAVGAPGAPGPPGSP----GPAGPTGKQGDRGEAGAQGPMGPSGP 1102
Score = 33.5 bits (75), Expect = 0.037
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 47 PFSPRSPFQPLI-PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
P P P P P PG+P G G A P G P G GP G G P G SG
Sbjct: 352 PAGPPGPVGPAGGPGFPGAP-GAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNP 410
Query: 106 G 106
G
Sbjct: 411 G 411
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/49 (38%), Positives = 20/49 (40%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G VG P G G G P+GP GP G G VGP P
Sbjct: 763 PKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGP 811
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 12/56 (21%)
Query: 67 GPVGPASPLGP----GFP--------IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GPA GP G P G G GP+GP GP GP G T P
Sbjct: 828 GPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGP 883
Score = 33.5 bits (75), Expect = 0.037
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 59 PRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G P G G A G GP GP GP+GP GP G G P
Sbjct: 839 PGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGP 892
Score = 33.5 bits (75), Expect = 0.037
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG+ G VGP G P GP GP GPKG GP G G
Sbjct: 899 PGAA-GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 942
Score = 33.1 bits (74), Expect = 0.048
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 44 PIFPFSPRSPFQPLIPR-TPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
P P P+ PL P+ G P G GP GP P G GP G +G
Sbjct: 436 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARG 495
Query: 98 PLGPSGPVGP 107
G GP+GP
Sbjct: 496 EPGGVGPIGP 505
Score = 33.1 bits (74), Expect = 0.048
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 67 GPVG-PASPLGPGF--PIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP G P G G PIGP GP G KG + P GP+G G
Sbjct: 774 GPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAG 816
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/42 (42%), Positives = 18/42 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
G G A GP P G GP P G GP G GP G T
Sbjct: 855 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGAT 896
Score = 32.7 bits (73), Expect = 0.063
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P + PG G G A P GP P G G GP G GP GP G
Sbjct: 623 PGAPGLRGLPGKD-GETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPG 675
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G+P GP GP+ GP P G GP G +GP G G G P
Sbjct: 861 GAP-GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGP 907
Score = 32.7 bits (73), Expect = 0.063
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 13/67 (19%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGK--------PVGPKGPMLPLGPSGPVG 106
P + G+P GP GP P G P G G PG+ P GP G G GP G
Sbjct: 908 PGSNGNP-GPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSG 966
Query: 107 PTSPLFP 113
P P
Sbjct: 967 AEGPPGP 973
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP G GP P GP G P G +G P G +G G P P
Sbjct: 906 GPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGP 952
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/49 (38%), Positives = 19/49 (38%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P GP G A P G G G G KG GP GP G P P
Sbjct: 829 PPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP 877
Score = 30.8 bits (68), Expect = 0.24
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 39 KTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPML 97
K V P P P+ P PR G G P G G P P PG P GP GP
Sbjct: 113 KDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPP-GPPGPPG 171
Query: 98 PLGPSG 103
P G G
Sbjct: 172 PPGLGG 177
Score = 30.4 bits (67), Expect = 0.31
Identities = 25/67 (37%), Positives = 27/67 (40%), Gaps = 21/67 (31%)
Query: 62 PGSPWGPVGPASPLGP----GFP--IGPMGP----GKP-----------VGPKGPMLPLG 100
P P G GPA G G P +GP+GP G P GPKG G
Sbjct: 475 PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERG 534
Query: 101 PSGPVGP 107
PSG GP
Sbjct: 535 PSGLAGP 541
Score = 30.4 bits (67), Expect = 0.31
Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 13/62 (20%)
Query: 58 IPRTPGSPWGPVGPASPLG-------PGFP--IGPMG-PGKPV--GPKGPMLPLGPSGPV 105
+P G+P G VGP G PG GP G PG P GPKG P GP G
Sbjct: 685 VPGEAGAP-GLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQ 743
Query: 106 GP 107
GP
Sbjct: 744 GP 745
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/54 (35%), Positives = 19/54 (35%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P G VGP P G G G GP GP GP G G
Sbjct: 790 PIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 843
Score = 30.4 bits (67), Expect = 0.31
Identities = 21/60 (35%), Positives = 22/60 (36%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P+ GP G A G P GP G G GP GP GP G
Sbjct: 916 PPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQG 975
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P +P G P G G + GP P+GP G P G G G GP G
Sbjct: 995 PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPG 1047
Score = 30.0 bits (66), Expect = 0.41
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
P P +P +P G P G A P G P G G GP GP G G +G
Sbjct: 548 PGRPGEPGLPGARGLTGRP-GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPG 606
Query: 110 P 110
P
Sbjct: 607 P 607
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG G G P+GP P G G VGP GP G G G
Sbjct: 779 PGKDGGR-GLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 822
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G P G GPA P G G GP GP GP G G VG
Sbjct: 938 PGRAGEP-GLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVG 984
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G G +G PG P GP G P GP G G +G GP P P
Sbjct: 1056 GDRGETGAVGAPGAP-GPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGP 1102
Score = 29.6 bits (65), Expect = 0.54
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GPA P G G GP G GP P G G G
Sbjct: 642 GPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPG 681
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/63 (33%), Positives = 21/63 (33%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P P P P R P G G GP P G G GP G P GP G
Sbjct: 916 PPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQG 975
Query: 104 PVG 106
G
Sbjct: 976 LAG 978
Score = 29.6 bits (65), Expect = 0.54
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 23/68 (33%)
Query: 62 PGSPWGPVGPASPLG----------------PGFPIGPMG-PGKPVGP-----KGPMLPL 99
P GP GP G PG P GP G PGK P +GP P+
Sbjct: 964 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLP-GPSGEPGKQGAPGASGDRGPPGPV 1022
Query: 100 GPSGPVGP 107
GP G GP
Sbjct: 1023 GPPGLTGP 1030
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG+P G G G GP GP P G +G GPSG G P P
Sbjct: 623 PGAP-GLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGP 673
Score = 29.3 bits (64), Expect = 0.70
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 46 FPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
FP P +P PG+ G GP P+GP GP G G G P G G
Sbjct: 994 FPGLPGPSGEPGKQGAPGAS-GDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAA 1052
Query: 106 G 106
G
Sbjct: 1053 G 1053
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 59 PRTPGSPWGPVGPASPLG-PGFP--IGPMGPGKPVGPKGPMLPLGPSGPVG 106
P GSP G G P G PG P GP G P GP G P G G G
Sbjct: 704 PGERGSP-GAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPG 753
Score = 28.9 bits (63), Expect = 0.91
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGP-GKP--------VGPKGPMLPLG 100
P + P + PG G G A P G +G GP G P GP GP P G
Sbjct: 740 PGAQGPPGLQGMPGER-GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAG 798
Query: 101 PSGPVGPTSPLFP 113
+G G P P
Sbjct: 799 ANGEKGEVGPPGP 811
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 12/54 (22%)
Query: 67 GPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLP-----------LGPSGPVGPT 108
GP G GP GP G G P P P LP GP G VGP+
Sbjct: 525 GPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPS 578
Score = 27.7 bits (60), Expect = 2.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 14/56 (25%)
Query: 65 PWGPVGPASPLG-------------PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P GP GPA G PG P GP G G G +G G G VGP
Sbjct: 643 PPGPAGPAGERGEQGAPGPSGFQGLPG-PPGPPGEGGKPGDQGVPGEAGAPGLVGP 697
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFC 115
P + GSP G G P+GP G G P G G G G GP P P
Sbjct: 305 PGVKGESGSP-GENGSPGPMGPRGLPGERGRTGPAGAAGAR---GNDGQPGPAGPPGPVG 360
Query: 116 P 116
P
Sbjct: 361 P 361
Score = 26.9 bits (58), Expect = 3.5
Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Query: 42 VSPIFPFSPRS-------PFQPLIPRTPGSPW--GPVGPASPLGP-GFPIGPMGPGKPVG 91
V PI P R P Q + G+P GP G A P G G P P PG P G
Sbjct: 500 VGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLP-G 558
Query: 92 PKGPMLPLGPSGPVGPTSP 110
+G G +GP G P
Sbjct: 559 ARGLTGRPGDAGPQGKVGP 577
Score = 26.9 bits (58), Expect = 3.5
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P G G G GP GP P G GP G G G P
Sbjct: 995 PGLPG-PSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGP 1045
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 47.0 bits (110), Expect = 3e-06
Identities = 31/74 (41%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG----PGFPIGPMGPGKPVGPKGPMLPL 99
P P + P P P P GPVGP+ G PG PIGP GP G GP P
Sbjct: 1075 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPG-PIGPPGPRGRSGETGPAGPP 1133
Query: 100 GPSGPVGPTSPLFP 113
G GP GP P P
Sbjct: 1134 GNPGPPGPPGPPGP 1147
Score = 45.8 bits (107), Expect = 7e-06
Identities = 26/49 (53%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 59 PRTPGSPWGPVGPASPLGP-GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP GPA GP GF P PG+P G GPM P GP GP G
Sbjct: 133 PMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEP-GVSGPMGPRGPPGPPG 180
Score = 42.7 bits (99), Expect = 6e-05
Identities = 26/52 (50%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGK--PVGPKGPMLPLGPSGPVG-PTSP 110
P P GPVGPA GPGFP P G+ P G +GP GP G G P SP
Sbjct: 283 PAGPPGPVGPAG--GPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSP 332
Score = 42.0 bits (97), Expect = 1e-04
Identities = 28/67 (41%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 59 PRTPGSPWGPVGPASPLGP-------------GFP--IGPMGPGKPVGPKGPMLPLGPSG 103
P TPG+P GP GP P GP GF G G GP GPM P GP G
Sbjct: 86 PGTPGNP-GPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPG 144
Query: 104 PVGPTSP 110
P G P
Sbjct: 145 PAGAPGP 151
Score = 42.0 bits (97), Expect = 1e-04
Identities = 29/70 (41%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGP-GKP--------VGPKGPML 97
P + S P I PG P GP GP P G P+GP G G+P GPKG
Sbjct: 347 PGAKGSAGAPGIAGAPGFP-GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPG 405
Query: 98 PLGPSGPVGP 107
P GP G GP
Sbjct: 406 PAGPQGAPGP 415
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPS---GPVGPTSP 110
GP GP+ G P GP GP P GP GP G + GP+GP P
Sbjct: 1074 GPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGP 1120
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/53 (43%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P PGSP GP G G GPMGP P G +G P GP G G
Sbjct: 998 PGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1050
Score = 40.8 bits (94), Expect = 2e-04
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 44 PIFPFSPRSPFQPLIPR----TPGSPWGPVGPASP------LGPGFPIGPMGPGKPVGPK 93
P P PR P P+ P G P GP+GP P GP P G GP P GP
Sbjct: 1087 PAGPSGPRGPPGPVGPSGKDGANGIP-GPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPP 1145
Query: 94 GPMLPLGPSGPVGP 107
GP + + +GP
Sbjct: 1146 GPGIDMSAFAGLGP 1159
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/59 (44%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT-SPLFPFCP 116
P GSP GP+GP G GP G G G P GP GPVGP P FP P
Sbjct: 245 PGENGSP-GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAP 302
Score = 40.4 bits (93), Expect = 3e-04
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G+P P P SP GP P G G G +GPM P GP+G G P P
Sbjct: 996 GAPGAPGPPGSP-GPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1045
Score = 37.7 bits (86), Expect = 0.002
Identities = 26/58 (44%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 59 PRTPGSPWGPVGPA-SPLGPGFPIGPMGPGKP--VGPKGPMLPLGPSGPVGPTSPLFP 113
P TPGSP GP G + +P G P G P G G P GP GP G T PL P
Sbjct: 326 PGTPGSP-GPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGP 382
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/84 (34%), Positives = 31/84 (36%), Gaps = 15/84 (17%)
Query: 44 PIFPFSPRSPFQPL----------IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK 93
P+ P PR P P P PG P G GP P GP P G G G
Sbjct: 133 PMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEP-GVSGPMGPRGPPGPPGKPGDDGEAGKP 191
Query: 94 GPMLPLGPSGPVG----PTSPLFP 113
G GP GP G P +P P
Sbjct: 192 GKAGERGPPGPQGARGFPGTPGLP 215
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/49 (40%), Positives = 22/49 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P GP G PLGP G G G +GP GP+GP G P
Sbjct: 367 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGP 415
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P GP GPA G +GP GP G +G G +GP GP
Sbjct: 721 PIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGP 763
Score = 37.0 bits (84), Expect = 0.003
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 27/76 (35%)
Query: 65 PWGPVGPASPLGPGFPIGPMG---------------------------PGKPVGPKGPML 97
P GP GPA G P GP G P P G +G
Sbjct: 1027 PMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASG 1086
Query: 98 PLGPSGPVGPTSPLFP 113
P GPSGP GP P+ P
Sbjct: 1087 PAGPSGPRGPPGPVGP 1102
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/45 (48%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSP 110
G GPA P GP P G G PG P G KG P G GP G P
Sbjct: 279 GQPGPAGPPGPVGPAGGPGFPGAP-GAKGEAGPTGARGPEGAQGP 322
Score = 36.2 bits (82), Expect = 0.006
Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 18/70 (25%)
Query: 59 PRTPGSPWGPVGPASPLG----PGF--------------PIGPMGPGKPVGPKGPMLPLG 100
PR P P G GP P G PG P GP G P G +G G
Sbjct: 367 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARG 426
Query: 101 PSGPVGPTSP 110
G VGP P
Sbjct: 427 EPGGVGPIGP 436
Score = 36.2 bits (82), Expect = 0.006
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP+GP P G G +GP P G G G G GP P
Sbjct: 720 GPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGP 763
Score = 36.2 bits (82), Expect = 0.006
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGP----GFP-----IGPMGPGKPVGPKGPMLPLG 100
P+ P P+ P GP G GP GFP +GP G GP GP P G
Sbjct: 796 PQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSG 855
Query: 101 PSGPVG 106
GP G
Sbjct: 856 KDGPKG 861
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/72 (38%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 41 RVSPIFPFSPRSPFQPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLP 98
RV P P S +P P P G P G G + P G G GP P G KG
Sbjct: 835 RVGP--PGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGD 892
Query: 99 LGPSGPVGPTSP 110
GPSG GP P
Sbjct: 893 DGPSGAEGPPGP 904
Score = 35.8 bits (81), Expect = 0.007
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKG----PMLP--LGPSGPVGPTSP 110
P P GP GPA GP G G GP+G P P GP GP GP P
Sbjct: 49 PKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGP 103
Score = 35.0 bits (79), Expect = 0.013
Identities = 25/59 (42%), Positives = 26/59 (44%), Gaps = 13/59 (22%)
Query: 59 PRTPGSPWGPVGPASPLGP-------GFPIGPMG----PGKPVGPKGPMLPLGPSGPVG 106
P+ P P GP G P G G P GP G PG P P GP P GP GP G
Sbjct: 49 PKGPPGPQGPAGEQGPRGDRGDKGEKGAP-GPRGRDGEPGTPGNP-GPPGPPGPPGPPG 105
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPK-GPMLPLGP--SGPVGPTSPLFP 113
GP G A G GP GP PVGP GP P P G GPT P
Sbjct: 267 GPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGP 316
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G P GP GP GP GPKG GP G G
Sbjct: 789 GDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATG 828
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 19/74 (25%)
Query: 58 IPRTPGSPWGPVGPASPLGP----------GFP--------IGPMGPGKPVGPKGPMLPL 99
+P TPG+ GP G + P GP G P GP G VG KGP
Sbjct: 652 LPGTPGTD-GPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAP 710
Query: 100 GPSGPVGPTSPLFP 113
G G G T P+ P
Sbjct: 711 GKDGGRGLTGPIGP 724
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 67 GPVG-PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G VG P +P PG P GP P G +G G GP+GP+ P
Sbjct: 993 GAVGAPGAPGPPGSP----GPAGPTGKQGDRGEAGAQGPMGPSGP 1033
Score = 33.5 bits (75), Expect = 0.037
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 47 PFSPRSPFQPLI-PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
P P P P P PG+P G G A P G P G GP G G P G SG
Sbjct: 283 PAGPPGPVGPAGGPGFPGAP-GAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNP 341
Query: 106 G 106
G
Sbjct: 342 G 342
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/49 (38%), Positives = 20/49 (40%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G VG P G G G P+GP GP G G VGP P
Sbjct: 694 PKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGP 742
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 12/56 (21%)
Query: 67 GPVGPASPLGP----GFP--------IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GPA GP G P G G GP+GP GP GP G T P
Sbjct: 759 GPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGP 814
Score = 33.5 bits (75), Expect = 0.037
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 59 PRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G P G G A G GP GP GP+GP GP G G P
Sbjct: 770 PGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGP 823
Score = 33.5 bits (75), Expect = 0.037
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG+ G VGP G P GP GP GPKG GP G G
Sbjct: 830 PGAA-GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 873
Score = 33.1 bits (74), Expect = 0.048
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 44 PIFPFSPRSPFQPLIPR-TPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
P P P+ PL P+ G P G GP GP P G GP G +G
Sbjct: 367 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARG 426
Query: 98 PLGPSGPVGP 107
G GP+GP
Sbjct: 427 EPGGVGPIGP 436
Score = 33.1 bits (74), Expect = 0.048
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 67 GPVG-PASPLGPGF--PIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP G P G G PIGP GP G KG + P GP+G G
Sbjct: 705 GPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAG 747
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/42 (42%), Positives = 18/42 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
G G A GP P G GP P G GP G GP G T
Sbjct: 786 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGAT 827
Score = 32.7 bits (73), Expect = 0.063
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P + PG G G A P GP P G G GP G GP GP G
Sbjct: 554 PGAPGLRGLPGKD-GETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPG 606
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G+P GP GP+ GP P G GP G +GP G G G P
Sbjct: 792 GAP-GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGP 838
Score = 32.7 bits (73), Expect = 0.063
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 13/67 (19%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGK--------PVGPKGPMLPLGPSGPVG 106
P + G+P GP GP P G P G G PG+ P GP G G GP G
Sbjct: 839 PGSNGNP-GPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSG 897
Query: 107 PTSPLFP 113
P P
Sbjct: 898 AEGPPGP 904
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP G GP P GP G P G +G P G +G G P P
Sbjct: 837 GPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGP 883
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/49 (38%), Positives = 19/49 (38%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P GP G A P G G G G KG GP GP G P P
Sbjct: 760 PPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP 808
Score = 30.8 bits (68), Expect = 0.24
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 39 KTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPML 97
K V P P P+ P PR G G P G G P P PG P GP GP
Sbjct: 44 KDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPP-GPPGPPG 102
Query: 98 PLGPSG 103
P G G
Sbjct: 103 PPGLGG 108
Score = 30.4 bits (67), Expect = 0.31
Identities = 25/67 (37%), Positives = 27/67 (40%), Gaps = 21/67 (31%)
Query: 62 PGSPWGPVGPASPLGP----GFP--IGPMGP----GKP-----------VGPKGPMLPLG 100
P P G GPA G G P +GP+GP G P GPKG G
Sbjct: 406 PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERG 465
Query: 101 PSGPVGP 107
PSG GP
Sbjct: 466 PSGLAGP 472
Score = 30.4 bits (67), Expect = 0.31
Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 13/62 (20%)
Query: 58 IPRTPGSPWGPVGPASPLG-------PGFP--IGPMG-PGKPV--GPKGPMLPLGPSGPV 105
+P G+P G VGP G PG GP G PG P GPKG P GP G
Sbjct: 616 VPGEAGAP-GLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQ 674
Query: 106 GP 107
GP
Sbjct: 675 GP 676
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/54 (35%), Positives = 19/54 (35%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P G VGP P G G G GP GP GP G G
Sbjct: 721 PIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 774
Score = 30.4 bits (67), Expect = 0.31
Identities = 21/60 (35%), Positives = 22/60 (36%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P P+ GP G A G P GP G G GP GP GP G
Sbjct: 847 PPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQG 906
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P +P G P G G + GP P+GP G P G G G GP G
Sbjct: 926 PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPG 978
Score = 30.0 bits (66), Expect = 0.41
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
P P +P +P G P G A P G P G G GP GP G G +G
Sbjct: 479 PGRPGEPGLPGARGLTGRP-GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPG 537
Query: 110 P 110
P
Sbjct: 538 P 538
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG G G P+GP P G G VGP GP G G G
Sbjct: 710 PGKDGGR-GLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 753
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G P G GPA P G G GP GP GP G G VG
Sbjct: 869 PGRAGEP-GLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVG 915
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G G +G PG P GP G P GP G G +G GP P P
Sbjct: 987 GDRGETGAVGAPGAP-GPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGP 1033
Score = 29.6 bits (65), Expect = 0.54
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GPA P G G GP G GP P G G G
Sbjct: 573 GPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPG 612
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/63 (33%), Positives = 21/63 (33%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P P P P R P G G GP P G G GP G P GP G
Sbjct: 847 PPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQG 906
Query: 104 PVG 106
G
Sbjct: 907 LAG 909
Score = 29.6 bits (65), Expect = 0.54
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 23/68 (33%)
Query: 62 PGSPWGPVGPASPLG----------------PGFPIGPMG-PGKPVGP-----KGPMLPL 99
P GP GP G PG P GP G PGK P +GP P+
Sbjct: 895 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLP-GPSGEPGKQGAPGASGDRGPPGPV 953
Query: 100 GPSGPVGP 107
GP G GP
Sbjct: 954 GPPGLTGP 961
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 62 PGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG+P G G GP P GP G G GP G GP GP
Sbjct: 554 PGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGP 604
Score = 29.3 bits (64), Expect = 0.70
Identities = 28/89 (31%), Positives = 31/89 (34%), Gaps = 26/89 (29%)
Query: 46 FPFSPRSPFQPLIPRTPGS-----PWGPVGPASPLGP-------GFPIGPMGPGK----- 88
FP P +P PG+ P GPVGP GP G P PG+
Sbjct: 925 FPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAG 984
Query: 89 ---------PVGPKGPMLPLGPSGPVGPT 108
VG G P G GP GPT
Sbjct: 985 VKGDRGETGAVGAPGAPGPPGSPGPAGPT 1013
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 59 PRTPGSPWGPVGPASPLG-PGFP--IGPMGPGKPVGPKGPMLPLGPSGPVG 106
P GSP G G P G PG P GP G P GP G P G G G
Sbjct: 635 PGERGSP-GAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPG 684
Score = 28.9 bits (63), Expect = 0.91
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGP-GKP--------VGPKGPMLPLG 100
P + P + PG G G A P G +G GP G P GP GP P G
Sbjct: 671 PGAQGPPGLQGMPGER-GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAG 729
Query: 101 PSGPVGPTSPLFP 113
+G G P P
Sbjct: 730 ANGEKGEVGPPGP 742
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 12/54 (22%)
Query: 67 GPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLP-----------LGPSGPVGPT 108
GP G GP GP G G P P P LP GP G VGP+
Sbjct: 456 GPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPS 509
Score = 27.7 bits (60), Expect = 2.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 14/56 (25%)
Query: 65 PWGPVGPASPLG-------------PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P GP GPA G PG P GP G G G +G G G VGP
Sbjct: 574 PPGPAGPAGERGEQGAPGPSGFQGLPG-PPGPPGEGGKPGDQGVPGEAGAPGLVGP 628
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G P P GP P GP G P G +G G GP G
Sbjct: 38 GEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRG 81
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFC 115
P + GSP G G P+GP G G P G G G G GP P P
Sbjct: 236 PGVKGESGSP-GENGSPGPMGPRGLPGERGRTGPAGAAGAR---GNDGQPGPAGPPGPVG 291
Query: 116 P 116
P
Sbjct: 292 P 292
Score = 26.9 bits (58), Expect = 3.5
Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Query: 42 VSPIFPFSPRS-------PFQPLIPRTPGSPW--GPVGPASPLGP-GFPIGPMGPGKPVG 91
V PI P R P Q + G+P GP G A P G G P P PG P G
Sbjct: 431 VGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLP-G 489
Query: 92 PKGPMLPLGPSGPVGPTSP 110
+G G +GP G P
Sbjct: 490 ARGLTGRPGDAGPQGKVGP 508
Score = 26.9 bits (58), Expect = 3.5
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P G G G GP GP P G GP G G G P
Sbjct: 926 PGLPG-PSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGP 976
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 47.0 bits (110), Expect = 3e-06
Identities = 32/74 (43%), Positives = 32/74 (43%), Gaps = 12/74 (16%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFP-----------IGPMGPGKPVGP 92
P P PR P P IP PG P GP G P PG P GP GP P GP
Sbjct: 858 PPGPPGPRGPPGPSIPGPPG-PRGPPGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGP 916
Query: 93 KGPMLPLGPSGPVG 106
KG P GP G G
Sbjct: 917 KGDQGPPGPRGHQG 930
Score = 44.3 bits (103), Expect = 2e-05
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 17/84 (20%)
Query: 50 PRSPFQPLIPRTPGSPW--------------GPVGPASPLGPGFPIGPMGPGKPVGPKGP 95
P +P +P I PG+P GP GP +GP P G GP P G G
Sbjct: 790 PGTPGRPGIKGEPGAPGKIVTSEGSSMLTVPGPPGPPGAMGPPGPPGAPGPAGPAGLPGH 849
Query: 96 MLPL---GPSGPVGPTSPLFPFCP 116
L GP GP GP P P P
Sbjct: 850 QEVLNLQGPPGPPGPRGPPGPSIP 873
Score = 42.7 bits (99), Expect = 6e-05
Identities = 29/72 (40%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPL--GPSGP 104
P P P P PG+P GP GPA G + GP P GP+GP P GP GP
Sbjct: 820 PGPPGPPGAMGPPGPPGAP-GPAGPAGLPGHQEVLNLQGPPGPPGPRGPPGPSIPGPPGP 878
Query: 105 VGPTSPLFPFCP 116
GP P P
Sbjct: 879 RGPPGEGLPGPP 890
Score = 42.0 bits (97), Expect = 1e-04
Identities = 38/107 (35%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 4 EAWSSELTILSNLMGTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPG 63
E W + + LM E GNL SP K G SP P TPG
Sbjct: 547 ELW---MFVRKKLMMEQENGNLRG--SPGPKGDMG----------SPGPKGDRGFPGTPG 591
Query: 64 SPWGPVGPASPLGPGFPIGPMG-PGK--PVGPKGPMLPLGPSGPVGP 107
P GP+G P GP G +G PG P+G +G P+GP G GP
Sbjct: 592 IP-GPLGHPGPQGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEAGP 637
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/63 (39%), Positives = 26/63 (41%), Gaps = 11/63 (17%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGF-----------PIGPMGPGKPVGPKGPMLPLGPSGP 104
P+ R P GP G A P G G P GP G VGPKG GP GP
Sbjct: 619 PMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGP 678
Query: 105 VGP 107
GP
Sbjct: 679 PGP 681
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/61 (42%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 59 PRTPGS--PWGPVGPASPLGPGFPIGPMG-------PGKPVGPKGPMLPLGPSGPVGPTS 109
P PGS P G G P GP P+G G PG G KGPM P GP G G
Sbjct: 658 PGVPGSVGPKGSSGSPGPQGPPGPVGLQGLRGEVGLPGVK-GDKGPMGPPGPKGDQGEKG 716
Query: 110 P 110
P
Sbjct: 717 P 717
Score = 35.8 bits (81), Expect = 0.007
Identities = 29/71 (40%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG-PGFP--IG-PMGPGKPVGPKGPMLPL 99
P F S S F + PG P GP GP G PG P +G P GP + G M
Sbjct: 935 PGFSTSGSSSFGLNLQGPPGPP-GPQGPKGDKGDPGVPGALGIPSGPSEG-GSSSTMYVS 992
Query: 100 GPSGPVGPTSP 110
GP GP GP P
Sbjct: 993 GPPGPPGPPGP 1003
Score = 33.1 bits (74), Expect = 0.048
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 12/54 (22%)
Query: 63 GSPWGPVGPASPLG----------PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GSP GP GP P+G PG G GP P GPKG GP G G
Sbjct: 671 GSP-GPQGPPGPVGLQGLRGEVGLPGVK-GDKGPMGPPGPKGDQGEKGPRGLTG 722
Score = 32.7 bits (73), Expect = 0.063
Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Query: 63 GSPWGPVG----PASPLGPGFPIGPMGPGKPVGPK---------GPMLPLGPSGPVGPTS 109
GSP GP G P +P PG P+G GP P G K GPM G GP+GP
Sbjct: 576 GSP-GPKGDRGFPGTPGIPG-PLGHPGPQGPKGQKGSVGDPGMEGPMGQRGREGPMGPRG 633
Query: 110 PLFP 113
P
Sbjct: 634 EAGP 637
Score = 32.7 bits (73), Expect = 0.063
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 59 PRTPGSPWGPVGPASPLG----PGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P P G G P G PG P G+P G KG M P GP G GP
Sbjct: 702 PMGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVGEP-GAKGAMGPAGPDGHQGP 753
Score = 32.7 bits (73), Expect = 0.063
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
+P G P G +GPA P G P G G G +GP P G G G T P P
Sbjct: 729 LPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGP 786
Score = 32.7 bits (73), Expect = 0.063
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 27/121 (22%)
Query: 18 GTSEEGNLLST----VSPTVKALFGKTRVSPIFPFSPRSP------FQPLIPRTPGSPW- 66
G S +G+LLS +S + + + +S P P P ++ L+ GS +
Sbjct: 1115 GASGDGSLLSLDYAELSSRILSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLRGSEFR 1174
Query: 67 GPVGPASPLGP-GFP---------------IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G VGP P GP G P + G GP GP P GP GP G +
Sbjct: 1175 GIVGPPGPPGPPGIPGNVWSSISVEDLSSYLHTAGLSFIPGPPGPPGPPGPRGPPGVSGA 1234
Query: 111 L 111
L
Sbjct: 1235 L 1235
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/47 (38%), Positives = 21/47 (44%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+T G+ GP G +G P G GP P G GP P G G G
Sbjct: 1431 QTYGAIQGPPGQKGEMGTPGPKGDRGPAGPPGHPGPPGPRGHKGEKG 1477
Score = 32.3 bits (72), Expect = 0.083
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 15/59 (25%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPL---------------GPSGPVGPTSP 110
G GP P G +GP G GP+GP P+ G GP+GP P
Sbjct: 650 GEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQGLRGEVGLPGVKGDKGPMGPPGP 708
Score = 30.8 bits (68), Expect = 0.24
Identities = 34/129 (26%), Positives = 37/129 (28%), Gaps = 62/129 (48%)
Query: 47 PFSPRSPFQPLIPRTPGSPW--------------GPVGPASPLGPGFPIGP--------- 83
P PR P +P PG P GP GP P G P GP
Sbjct: 875 PPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGPKGDQGPPGPRGHQGEQGL 934
Query: 84 ---------------MGPGKPVGPKGPM-------------LPLGP-----------SGP 104
GP P GP+GP +P GP SGP
Sbjct: 935 PGFSTSGSSSFGLNLQGPPGPPGPQGPKGDKGDPGVPGALGIPSGPSEGGSSSTMYVSGP 994
Query: 105 VGPTSPLFP 113
GP P P
Sbjct: 995 PGPPGPPGP 1003
Score = 30.0 bits (66), Expect = 0.41
Identities = 24/53 (45%), Positives = 25/53 (47%), Gaps = 10/53 (18%)
Query: 62 PGSPWGPVGPASPLG----PGF--PIGPMG-PGKP--VGPKGPM-LPLGPSGP 104
P P G GP G PG P GP G PGKP GP+GP LP P P
Sbjct: 744 PAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQGLPGTPGRP 796
Score = 30.0 bits (66), Expect = 0.41
Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 28/103 (27%)
Query: 37 FGKTRVSPIFPFSPRSPF----QPLIPRTPGSPWGPV--GPASPL---GPGFPIGPMGPG 87
FG P P P+ P P +P G P GP G +S + GP P GP GP
Sbjct: 945 FGLNLQGPPGPPGPQGPKGDKGDPGVPGALGIPSGPSEGGSSSTMYVSGPPGPPGPPGPP 1004
Query: 88 KPVGPKGPMLPL-------------------GPSGPVGPTSPL 111
+ G + GP GP GP P+
Sbjct: 1005 GSISSSGQEIQQYISEYMQSDSIRSYLSGVQGPPGPPGPPGPV 1047
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 76 GPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GP G MG P G +GP P G GP GP
Sbjct: 1438 GPPGQKGEMGTPGPKGDRGPAGPPGHPGPPGP 1469
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
TPG P G GPA P G P GP G G KG + G
Sbjct: 1448 TPG-PKGDRGPAGPPGHPGPPGPRGHKGEKGDKGDQVYAG 1486
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Query: 80 PIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P G G GPKG P GP G GP P
Sbjct: 1439 PPGQKGEMGTPGPKGDRGPAGPPGHPGPPGP 1469
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P G +G P G P GP G P GP+G G G
Sbjct: 1439 PPGQKGEMGTPGPKGDRGPAGPPGHPGPPGPRGHKGEKGDKG 1480
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 82 GPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
GP G +G GP GP+GP G P P
Sbjct: 1438 GPPGQKGEMGTPGPKGDRGPAGPPGHPGPPGP 1469
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 46.2 bits (108), Expect = 6e-06
Identities = 25/61 (40%), Positives = 27/61 (44%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
PR P PR GP G P G GP GP GP+GP P+G GP GP
Sbjct: 890 PRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG 949
Query: 110 P 110
P
Sbjct: 950 P 950
Score = 46.2 bits (108), Expect = 6e-06
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 62 PGSPWGPVG------PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP+G P G +GPMGP P GP+GP P G GP GP
Sbjct: 1203 PGPP-GPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGP 1253
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/61 (40%), Positives = 27/61 (44%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P R P P R P G GP G P GP G P GP+GP+ GP GP G
Sbjct: 890 PRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG 949
Query: 107 P 107
P
Sbjct: 950 P 950
Score = 44.3 bits (103), Expect = 2e-05
Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMG-PGKP-----------VGPKGPMLPLGPSGPVGP 107
R P P GPVG P GP P G G PG P GP GP +GP GP G
Sbjct: 930 RGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE 989
Query: 108 TSPL 111
T P+
Sbjct: 990 TGPI 993
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG G VGP P GP P GP GP GP+GP +G G VG
Sbjct: 1214 LPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1264
Score = 42.4 bits (98), Expect = 8e-05
Identities = 26/58 (44%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 58 IPRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
+P T GSP G GPA PLGP P G GP P G KG P G G G P
Sbjct: 1487 LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGP 1544
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/54 (42%), Positives = 23/54 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
R P P G G P G P G G P GP G P GP GPVG P P
Sbjct: 894 RGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGP 947
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG P GP GPA G GP GP G +GP+ GP+GP G
Sbjct: 1085 LPGRPG-PQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAG 1132
Score = 40.4 bits (93), Expect = 3e-04
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
TPG+P P G A GP P G MGP GP G GP G GP P+ P
Sbjct: 671 TPGAPGQP-GMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGP 722
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/82 (36%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----PGFP-----------IGPMGPGKPVG 91
P P P P+ P GP GP P G PG P GP GPG VG
Sbjct: 923 PPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVG 982
Query: 92 PKGPMLPLGPSGPVGPTSPLFP 113
P+GP GP G G P P
Sbjct: 983 PQGPTGETGPIGERGHPGPPGP 1004
Score = 40.4 bits (93), Expect = 3e-04
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 59 PRTPGSPW--GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P GSP G G A P+G PG P GP GP P G KG GP GP G
Sbjct: 1065 PGPVGSPGERGSAGTAGPIGLPGRP-GPQGPPGPAGEKGAPGEKGPQGPAG 1114
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P GPVG G GP+G PG+P GP+GP P G G G P P
Sbjct: 1061 PQGPPGPVGSPGERGSAGTAGPIGLPGRP-GPQGPPGPAGEKGAPGEKGPQGP 1112
Score = 39.7 bits (91), Expect = 5e-04
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 59 PRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P GP GP +GP GP G GP+G P GP GP G P
Sbjct: 672 PGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGP 728
Score = 39.7 bits (91), Expect = 5e-04
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP GP P G G GP P G G P+G GP GP
Sbjct: 1086 PGRP-GPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGP 1130
Score = 38.9 bits (89), Expect = 9e-04
Identities = 21/49 (42%), Positives = 22/49 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P GPVGP P G P G G PVG +G G GP GP P
Sbjct: 1400 PPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGP 1448
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/60 (40%), Positives = 24/60 (40%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P PR P P G G P GP GP GP PVG GP P GP G G
Sbjct: 896 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG 955
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 50 PRSPFQPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P + +P PG G G P GPG +GP GP GP G GP GP G
Sbjct: 948 PGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPG 1006
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 49 SPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P +P QP + G P G +GP GP G GP GP+GP+ P G GP G
Sbjct: 671 TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQG 730
Score = 37.7 bits (86), Expect = 0.002
Identities = 20/49 (40%), Positives = 21/49 (42%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P GP GP P GP GP GP VG G + G G G P
Sbjct: 1229 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGP 1277
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/53 (47%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P P GPA G G G G PG+P GP GP GP GP G P
Sbjct: 1326 PGDPGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGPPGKRGP 1376
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 62 PGSPWGPVGPASPLGP-------GFPIGPMGPGKP-----VGPKGPMLPLGPSGPVGPTS 109
PG P GP+GP GP G P PG P G KG + P GP GP+G
Sbjct: 714 PG-PQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPG 772
Query: 110 P 110
P
Sbjct: 773 P 773
Score = 37.4 bits (85), Expect = 0.003
Identities = 26/55 (47%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G P GP G P GP G GP GKP GPKG GP GP G P P P
Sbjct: 886 GKP-GPRGQRGPTGPRGSRGARGPTGKP-GPKGTSGGDGPPGPPGERGPQGPQGP 938
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGP------KGPMLPLGPSGPVGPTSPLFPFC 115
PG P GP GP+ GP P G GP G KG G GP G T P+ P
Sbjct: 1353 PGQP-GPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQG 1411
Query: 116 P 116
P
Sbjct: 1412 P 1412
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/46 (43%), Positives = 20/46 (43%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P GP GP GP P G G P G KG GP G GP
Sbjct: 1505 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1550
Score = 35.8 bits (81), Expect = 0.007
Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 17/77 (22%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----------------PGFPIGPMGPGKPV 90
P P P P P+ P GP GP +G PG P G G G P
Sbjct: 1229 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG-PPGEAGVGGPK 1287
Query: 91 GPKGPMLPLGPSGPVGP 107
G +G GP G GP
Sbjct: 1288 GERGEKGEAGPPGAAGP 1304
Score = 35.4 bits (80), Expect = 0.010
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 76 GPGFPIGPMG-PGKP--VGPKGPMLPLGPSGPVGPTSPLFP 113
GP PIG G PG P G G + P+GP GP GP P P
Sbjct: 1204 GPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGP 1244
Score = 35.4 bits (80), Expect = 0.010
Identities = 28/77 (36%), Positives = 30/77 (38%), Gaps = 25/77 (32%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----------------------PGK--PVGPKG 94
P PG P GP G A P GP GP G PGK PVGP+G
Sbjct: 1353 PGQPGPP-GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQG 1411
Query: 95 PMLPLGPSGPVGPTSPL 111
P GP G G P+
Sbjct: 1412 PAGKPGPEGLRGIPGPV 1428
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 67 GPVGPASPLGP-GFPIGPMGPGK-----PVGPKGPMLPLGPSGPVG 106
G GP LGP G P P PG P GPKG M P G GP G
Sbjct: 658 GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPG 703
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/45 (42%), Positives = 20/45 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P G VGP P G PIG G P GP G G +G G
Sbjct: 974 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 1018
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 18/76 (23%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-------------PGKP-----VGPKG 94
P P P P P GP G P GP +G +G PG P GPKG
Sbjct: 1229 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG 1288
Query: 95 PMLPLGPSGPVGPTSP 110
G +GP G P
Sbjct: 1289 ERGEKGEAGPPGAAGP 1304
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P P G G P+G G G GP+GP GP GP G
Sbjct: 540 RGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTG 586
Score = 33.9 bits (76), Expect = 0.028
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM----LPLGPSGPVGP--TSPLFPF 114
P GP GPA +GP GP GP G +GP LP G G GP T + PF
Sbjct: 455 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLP-GADGLPGPPGTMLMLPF 509
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG-PTSPLFP 113
G VG P G P GP G P G GP G G +G P P +P
Sbjct: 811 GEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYP 858
Score = 33.5 bits (75), Expect = 0.037
Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 21/90 (23%)
Query: 42 VSPIFPFSPRSPFQPLIPRTPGSPWGPVG---------------------PASPLGPGFP 80
V P+ P P P P P P GP G P G G P
Sbjct: 1227 VGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1286
Query: 81 IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G GP G P G GP G P
Sbjct: 1287 KGERGEKGEAGPPGAAGPPGAKGPPGDDGP 1316
Score = 33.5 bits (75), Expect = 0.037
Identities = 18/40 (45%), Positives = 19/40 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G A GP GP+GP P G GP G GPVG
Sbjct: 1390 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVG 1429
Score = 33.1 bits (74), Expect = 0.048
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL-FPFCP 116
PG P G G P G G GP GP G P G GP G P+ FP P
Sbjct: 1275 PGPP-GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDP 1329
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/44 (40%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G P G P GP G GP G P G SG GP P
Sbjct: 883 GVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGP 926
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GP +GP GP G P+G +G P GP G G
Sbjct: 973 GPPGPGGVVGPQ---GPTGETGPIGERGHPGPPGPPGEQG 1009
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/46 (41%), Positives = 20/46 (43%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P G G A P G P G GP GPKG P+G G GP
Sbjct: 1286 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1331
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/44 (38%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GP G P+G G G G P GP G GP P
Sbjct: 541 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGP 584
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 48 FSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGP----MGPGKPVGPKGPMLPLGPSG 103
F P P + I T + G G G + P GP P GP G M P G G
Sbjct: 413 FGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQG 472
Query: 104 PVGP 107
P GP
Sbjct: 473 PTGP 476
Score = 32.0 bits (71), Expect = 0.11
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP P GP +GP G P GP G GP G G
Sbjct: 454 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPG 490
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
+P PG G GP P GP G G +GP+G GP G +GP
Sbjct: 617 LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGP 668
Score = 32.0 bits (71), Expect = 0.11
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKG-PMLPLGPSGPVGPTS-PLFP 113
PR P GP G A P G P G G +G G P P G GP G T P FP
Sbjct: 818 PRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYP-GRQGPKGSTGFPGFP 873
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/52 (36%), Positives = 20/52 (38%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG GP GP GP G GP P G +G G G G P
Sbjct: 974 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP 1025
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/42 (42%), Positives = 18/42 (42%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G GP GP GP G PVG G P G GP G
Sbjct: 1298 PPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAG 1339
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/40 (45%), Positives = 18/40 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GPA P G P G GP P G G P G G G
Sbjct: 454 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPG 493
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 16/66 (24%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGKP--------VGPKGPMLPL----GPS 102
P P P G +GP GP P G G PG+P GP G ML L G
Sbjct: 455 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGD 514
Query: 103 GPVGPT 108
G GPT
Sbjct: 515 GSKGPT 520
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G +G G IGP G P GPKG P G GP G
Sbjct: 802 GDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG 841
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/48 (39%), Positives = 19/48 (39%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP G P GP G GP G G P G GP G
Sbjct: 1505 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPG 1552
Score = 31.2 bits (69), Expect = 0.18
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P P GP G G IGP G GP+G + P G G G
Sbjct: 630 RGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPG 676
Score = 31.2 bits (69), Expect = 0.18
Identities = 17/44 (38%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G GP GP GP G P G GP+ G GP G P
Sbjct: 1294 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGP 1337
Score = 31.2 bits (69), Expect = 0.18
Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 63 GSPWGPVG-PASPLGPGFPIGPMGPGKPVGPKG----PMLPLGPSGPVGPTSPLFP 113
G+P GPVG P P PG P GP G G KG P P GP GP G P P
Sbjct: 1318 GNP-GPVGFPGDPGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGP 1370
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/58 (34%), Positives = 24/58 (41%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P + P+ P G G P G P GP+GP GP+G G G GP
Sbjct: 686 PPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGP 743
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 10/61 (16%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-------PGK--PVGPKGPMLPLGPSGPVGPTSPLF 112
PG P G GP P+GP GP G PG P G G G G +GP P
Sbjct: 708 PG-PQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQG 766
Query: 113 P 113
P
Sbjct: 767 P 767
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-PGK--PVGPKGPMLPLGPSGPVG 106
P P + P+ P GP+G GP P G G PG G KG P G SG G
Sbjct: 974 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDG 1033
Query: 107 P 107
P
Sbjct: 1034 P 1034
Score = 30.8 bits (68), Expect = 0.24
Identities = 27/86 (31%), Positives = 29/86 (33%), Gaps = 36/86 (41%)
Query: 59 PRTPGSPWGPVG-------------PASPLGPGFPIGPMGPGKPVGPKGP---------- 95
P PG P GP G P P GP P G GP P G +GP
Sbjct: 1329 PGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGPPGKRGPPGAAGAEGRQ 1386
Query: 96 -----------MLPLGPSGPVGPTSP 110
P G +GPVGP P
Sbjct: 1387 GEKGAKGEAGAEGPPGKTGPVGPQGP 1412
Score = 30.4 bits (67), Expect = 0.31
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 21/73 (28%)
Query: 59 PRTPGSPWGPVGPASPLGP-------GFPIGPMGPGKP--------------VGPKGPML 97
P P G GP GP GFP P PG+P G G
Sbjct: 1298 PPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPG 1357
Query: 98 PLGPSGPVGPTSP 110
P GPSG GP P
Sbjct: 1358 PPGPSGEAGPPGP 1370
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 21/82 (25%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLG----------PGFP--IGPMG----PGKP---- 89
PR P P+ P G GP+ G PG+P GP G PG P
Sbjct: 818 PRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANG 877
Query: 90 -VGPKGPMLPLGPSGPVGPTSP 110
G +G GP G GPT P
Sbjct: 878 EKGARGVAGKPGPRGQRGPTGP 899
Score = 30.0 bits (66), Expect = 0.41
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
GP GPA G G +G G KG GP GP G P+
Sbjct: 1126 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1170
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/48 (37%), Positives = 18/48 (37%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G P G G GP GP G P G GP GP G G P
Sbjct: 1284 GGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1331
Score = 29.6 bits (65), Expect = 0.54
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 18 GTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGP 77
G +G +S +A+ + R++ P P G P GPVG G
Sbjct: 513 GDGSKGPTISAQEAQAQAILQQARIALRGPPGPMG--------LTGRP-GPVGGPGSSGA 563
Query: 78 GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G GP P G +GP P G G G
Sbjct: 564 KGESGDPGPQGPRGVQGPPGPTGKPGKRG 592
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/58 (34%), Positives = 23/58 (39%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
PR +G G G P GP+G GP G G GP+GP P P P
Sbjct: 1184 PRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGP 1241
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/56 (35%), Positives = 21/56 (37%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
P P P P G GP P G GP G G GP GP G V P+
Sbjct: 1505 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLPI 1560
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 76 GPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GP P GP G P G +GP P G G GP
Sbjct: 454 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGP 485
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG P G G GP P GP G G G + P G G GP L P
Sbjct: 618 PGLP-GDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGP 668
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ P P + GP GPA G P+G GP P G G G G +G
Sbjct: 1091 PQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED---GDKGEIG 1144
Score = 28.9 bits (63), Expect = 0.91
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GPVG P GP G G +G G G G GP P
Sbjct: 1120 GPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP 1163
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 44 PIFPFSPRSPF-QPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
PI P + P +P + PG+ P G G G +GP GP P+G GP G
Sbjct: 719 PIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG 778
Query: 101 PSGPVG 106
G G
Sbjct: 779 ADGVRG 784
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P G GPA P G G G G KG G +GP GP
Sbjct: 1121 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP 1163
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/45 (37%), Positives = 18/45 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
G G +G P G GP P G GP GPSG G L
Sbjct: 805 GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKL 849
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/51 (47%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 63 GSPWGPVGPASPLGP----GFPIGPMG-PGKPVGP--KGPMLPLGPSGPVG 106
G P GP G + GP GFP G G PG P KG P GP GPVG
Sbjct: 1021 GDP-GPQGISGKDGPAGLRGFP-GERGLPGAQGAPGLKGGEGPQGPPGPVG 1069
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 38 GKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
GKT P+ P P P R P G G G P GPMGP G KG
Sbjct: 1402 GKT--GPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPG 1459
Query: 98 PLGPSGPVG 106
G G G
Sbjct: 1460 SKGEKGHPG 1468
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G +GP G G G G KG GP+GP+GP P
Sbjct: 1471 GLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGP 1514
Score = 26.9 bits (58), Expect = 3.5
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 24/73 (32%)
Query: 62 PGSPWGPVGPASPLG----------------------PGFP--IGPMGPGKPVGPKGPML 97
P P GP+G P G PGF +G G VG GP
Sbjct: 761 PPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRG 820
Query: 98 PLGPSGPVGPTSP 110
GP GP G P
Sbjct: 821 EDGPEGPKGRAGP 833
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 67 GPVGPASPLGP-GFPIGPMGPGKPV--GPKGPMLPLGPSGPVGPTSPLFP 113
GP G G G P PG G GP PLGP GP G P P
Sbjct: 1474 GPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGP 1523
Score = 26.6 bits (57), Expect = 4.5
Identities = 26/73 (35%), Positives = 27/73 (36%), Gaps = 30/73 (41%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMG-------------PGKPVGPKG-------PMLP---- 98
G P GP GP GP P G G PG+P G KG P LP
Sbjct: 568 GDP-GPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEP-GAKGDRGFDGLPGLPGDKG 625
Query: 99 ----LGPSGPVGP 107
GP GP GP
Sbjct: 626 HRGERGPQGPPGP 638
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 46.2 bits (108), Expect = 6e-06
Identities = 25/61 (40%), Positives = 27/61 (44%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
PR P PR GP G P G GP GP GP+GP P+G GP GP
Sbjct: 839 PRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG 898
Query: 110 P 110
P
Sbjct: 899 P 899
Score = 46.2 bits (108), Expect = 6e-06
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 62 PGSPWGPVG------PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP+G P G +GPMGP P GP+GP P G GP GP
Sbjct: 1152 PGPP-GPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGP 1202
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/61 (40%), Positives = 27/61 (44%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P R P P R P G GP G P GP G P GP+GP+ GP GP G
Sbjct: 839 PRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG 898
Query: 107 P 107
P
Sbjct: 899 P 899
Score = 44.3 bits (103), Expect = 2e-05
Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMG-PGKP-----------VGPKGPMLPLGPSGPVGP 107
R P P GPVG P GP P G G PG P GP GP +GP GP G
Sbjct: 879 RGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE 938
Query: 108 TSPL 111
T P+
Sbjct: 939 TGPI 942
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG G VGP P GP P GP GP GP+GP +G G VG
Sbjct: 1163 LPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1213
Score = 42.4 bits (98), Expect = 8e-05
Identities = 26/58 (44%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 58 IPRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
+P T GSP G GPA PLGP P G GP P G KG P G G G P
Sbjct: 1436 LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGP 1493
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/54 (42%), Positives = 23/54 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
R P P G G P G P G G P GP G P GP GPVG P P
Sbjct: 843 RGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGP 896
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG P GP GPA G GP GP G +GP+ GP+GP G
Sbjct: 1034 LPGRPG-PQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAG 1081
Score = 40.4 bits (93), Expect = 3e-04
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
TPG+P P G A GP P G MGP GP G GP G GP P+ P
Sbjct: 620 TPGAPGQP-GMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGP 671
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/82 (36%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----PGFP-----------IGPMGPGKPVG 91
P P P P+ P GP GP P G PG P GP GPG VG
Sbjct: 872 PPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVG 931
Query: 92 PKGPMLPLGPSGPVGPTSPLFP 113
P+GP GP G G P P
Sbjct: 932 PQGPTGETGPIGERGHPGPPGP 953
Score = 40.4 bits (93), Expect = 3e-04
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 59 PRTPGSPW--GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P GSP G G A P+G PG P GP GP P G KG GP GP G
Sbjct: 1014 PGPVGSPGERGSAGTAGPIGLPGRP-GPQGPPGPAGEKGAPGEKGPQGPAG 1063
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P GPVG G GP+G PG+P GP+GP P G G G P P
Sbjct: 1010 PQGPPGPVGSPGERGSAGTAGPIGLPGRP-GPQGPPGPAGEKGAPGEKGPQGP 1061
Score = 39.7 bits (91), Expect = 5e-04
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 59 PRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P GP GP +GP GP G GP+G P GP GP G P
Sbjct: 621 PGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGP 677
Score = 39.7 bits (91), Expect = 5e-04
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP GP P G G GP P G G P+G GP GP
Sbjct: 1035 PGRP-GPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGP 1079
Score = 38.9 bits (89), Expect = 9e-04
Identities = 21/49 (42%), Positives = 22/49 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P GPVGP P G P G G PVG +G G GP GP P
Sbjct: 1349 PPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGP 1397
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/60 (40%), Positives = 24/60 (40%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P PR P P G G P GP GP GP PVG GP P GP G G
Sbjct: 845 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG 904
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 50 PRSPFQPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P + +P PG G G P GPG +GP GP GP G GP GP G
Sbjct: 897 PGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPG 955
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 49 SPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P +P QP + G P G +GP GP G GP GP+GP+ P G GP G
Sbjct: 620 TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQG 679
Score = 37.7 bits (86), Expect = 0.002
Identities = 20/49 (40%), Positives = 21/49 (42%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P GP GP P GP GP GP VG G + G G G P
Sbjct: 1178 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGP 1226
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/53 (47%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P P GPA G G G G PG+P GP GP GP GP G P
Sbjct: 1275 PGDPGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGPPGKRGP 1325
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 62 PGSPWGPVGPASPLGP-------GFPIGPMGPGKP-----VGPKGPMLPLGPSGPVGPTS 109
PG P GP+GP GP G P PG P G KG + P GP GP+G
Sbjct: 663 PG-PQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPG 721
Query: 110 P 110
P
Sbjct: 722 P 722
Score = 37.4 bits (85), Expect = 0.003
Identities = 26/55 (47%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G P GP G P GP G GP GKP GPKG GP GP G P P P
Sbjct: 835 GKP-GPRGQRGPTGPRGSRGARGPTGKP-GPKGTSGGDGPPGPPGERGPQGPQGP 887
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGP------KGPMLPLGPSGPVGPTSPLFPFC 115
PG P GP GP+ GP P G GP G KG G GP G T P+ P
Sbjct: 1302 PGQP-GPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQG 1360
Query: 116 P 116
P
Sbjct: 1361 P 1361
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/46 (43%), Positives = 20/46 (43%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P GP GP GP P G G P G KG GP G GP
Sbjct: 1454 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1499
Score = 35.8 bits (81), Expect = 0.007
Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 17/77 (22%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----------------PGFPIGPMGPGKPV 90
P P P P P+ P GP GP +G PG P G G G P
Sbjct: 1178 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG-PPGEAGVGGPK 1236
Query: 91 GPKGPMLPLGPSGPVGP 107
G +G GP G GP
Sbjct: 1237 GERGEKGEAGPPGAAGP 1253
Score = 35.4 bits (80), Expect = 0.010
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 76 GPGFPIGPMG-PGKP--VGPKGPMLPLGPSGPVGPTSPLFP 113
GP PIG G PG P G G + P+GP GP GP P P
Sbjct: 1153 GPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGP 1193
Score = 35.4 bits (80), Expect = 0.010
Identities = 28/77 (36%), Positives = 30/77 (38%), Gaps = 25/77 (32%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----------------------PGK--PVGPKG 94
P PG P GP G A P GP GP G PGK PVGP+G
Sbjct: 1302 PGQPGPP-GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQG 1360
Query: 95 PMLPLGPSGPVGPTSPL 111
P GP G G P+
Sbjct: 1361 PAGKPGPEGLRGIPGPV 1377
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 67 GPVGPASPLGP-GFPIGPMGPGK-----PVGPKGPMLPLGPSGPVG 106
G GP LGP G P P PG P GPKG M P G GP G
Sbjct: 607 GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPG 652
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/45 (42%), Positives = 20/45 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P G VGP P G PIG G P GP G G +G G
Sbjct: 923 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 967
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 18/76 (23%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-------------PGKP-----VGPKG 94
P P P P P GP G P GP +G +G PG P GPKG
Sbjct: 1178 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG 1237
Query: 95 PMLPLGPSGPVGPTSP 110
G +GP G P
Sbjct: 1238 ERGEKGEAGPPGAAGP 1253
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P P G G P+G G G GP+GP GP GP G
Sbjct: 489 RGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTG 535
Score = 33.9 bits (76), Expect = 0.028
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM----LPLGPSGPVGP--TSPLFPF 114
P GP GPA +GP GP GP G +GP LP G G GP T + PF
Sbjct: 404 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLP-GADGLPGPPGTMLMLPF 458
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG-PTSPLFP 113
G VG P G P GP G P G GP G G +G P P +P
Sbjct: 760 GEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYP 807
Score = 33.5 bits (75), Expect = 0.037
Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 21/90 (23%)
Query: 42 VSPIFPFSPRSPFQPLIPRTPGSPWGPVG---------------------PASPLGPGFP 80
V P+ P P P P P P GP G P G G P
Sbjct: 1176 VGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1235
Query: 81 IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G GP G P G GP G P
Sbjct: 1236 KGERGEKGEAGPPGAAGPPGAKGPPGDDGP 1265
Score = 33.5 bits (75), Expect = 0.037
Identities = 18/40 (45%), Positives = 19/40 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G A GP GP+GP P G GP G GPVG
Sbjct: 1339 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVG 1378
Score = 33.1 bits (74), Expect = 0.048
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL-FPFCP 116
PG P G G P G G GP GP G P G GP G P+ FP P
Sbjct: 1224 PGPP-GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDP 1278
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/44 (40%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G P G P GP G GP G P G SG GP P
Sbjct: 832 GVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGP 875
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GP +GP GP G P+G +G P GP G G
Sbjct: 922 GPPGPGGVVGPQ---GPTGETGPIGERGHPGPPGPPGEQG 958
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/46 (41%), Positives = 20/46 (43%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P G G A P G P G GP GPKG P+G G GP
Sbjct: 1235 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1280
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/44 (38%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GP G P+G G G G P GP G GP P
Sbjct: 490 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGP 533
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 48 FSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGP----MGPGKPVGPKGPMLPLGPSG 103
F P P + I T + G G G + P GP P GP G M P G G
Sbjct: 362 FGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQG 421
Query: 104 PVGP 107
P GP
Sbjct: 422 PTGP 425
Score = 32.0 bits (71), Expect = 0.11
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP P GP +GP G P GP G GP G G
Sbjct: 403 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPG 439
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
+P PG G GP P GP G G +GP+G GP G +GP
Sbjct: 566 LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGP 617
Score = 32.0 bits (71), Expect = 0.11
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKG-PMLPLGPSGPVGPTS-PLFP 113
PR P GP G A P G P G G +G G P P G GP G T P FP
Sbjct: 767 PRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYP-GRQGPKGSTGFPGFP 822
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/52 (36%), Positives = 20/52 (38%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG GP GP GP G GP P G +G G G G P
Sbjct: 923 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP 974
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/42 (42%), Positives = 18/42 (42%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G GP GP GP G PVG G P G GP G
Sbjct: 1247 PPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAG 1288
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/40 (45%), Positives = 18/40 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GPA P G P G GP P G G P G G G
Sbjct: 403 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPG 442
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 16/66 (24%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGKP--------VGPKGPMLPL----GPS 102
P P P G +GP GP P G G PG+P GP G ML L G
Sbjct: 404 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGD 463
Query: 103 GPVGPT 108
G GPT
Sbjct: 464 GSKGPT 469
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G +G G IGP G P GPKG P G GP G
Sbjct: 751 GDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG 790
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/48 (39%), Positives = 19/48 (39%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP G P GP G GP G G P G GP G
Sbjct: 1454 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPG 1501
Score = 31.2 bits (69), Expect = 0.18
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P P GP G G IGP G GP+G + P G G G
Sbjct: 579 RGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPG 625
Score = 31.2 bits (69), Expect = 0.18
Identities = 17/44 (38%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G GP GP GP G P G GP+ G GP G P
Sbjct: 1243 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGP 1286
Score = 31.2 bits (69), Expect = 0.18
Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 63 GSPWGPVG-PASPLGPGFPIGPMGPGKPVGPKG----PMLPLGPSGPVGPTSPLFP 113
G+P GPVG P P PG P GP G G KG P P GP GP G P P
Sbjct: 1267 GNP-GPVGFPGDPGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGP 1319
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/58 (34%), Positives = 24/58 (41%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P + P+ P G G P G P GP+GP GP+G G G GP
Sbjct: 635 PPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGP 692
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 10/61 (16%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-------PGK--PVGPKGPMLPLGPSGPVGPTSPLF 112
PG P G GP P+GP GP G PG P G G G G +GP P
Sbjct: 657 PG-PQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQG 715
Query: 113 P 113
P
Sbjct: 716 P 716
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-PGK--PVGPKGPMLPLGPSGPVG 106
P P + P+ P GP+G GP P G G PG G KG P G SG G
Sbjct: 923 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDG 982
Query: 107 P 107
P
Sbjct: 983 P 983
Score = 30.8 bits (68), Expect = 0.24
Identities = 27/86 (31%), Positives = 29/86 (33%), Gaps = 36/86 (41%)
Query: 59 PRTPGSPWGPVG-------------PASPLGPGFPIGPMGPGKPVGPKGP---------- 95
P PG P GP G P P GP P G GP P G +GP
Sbjct: 1278 PGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGPPGKRGPPGAAGAEGRQ 1335
Query: 96 -----------MLPLGPSGPVGPTSP 110
P G +GPVGP P
Sbjct: 1336 GEKGAKGEAGAEGPPGKTGPVGPQGP 1361
Score = 30.4 bits (67), Expect = 0.31
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 21/73 (28%)
Query: 59 PRTPGSPWGPVGPASPLGP-------GFPIGPMGPGKP--------------VGPKGPML 97
P P G GP GP GFP P PG+P G G
Sbjct: 1247 PPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPG 1306
Query: 98 PLGPSGPVGPTSP 110
P GPSG GP P
Sbjct: 1307 PPGPSGEAGPPGP 1319
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 21/82 (25%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLG----------PGFP--IGPMG----PGKP---- 89
PR P P+ P G GP+ G PG+P GP G PG P
Sbjct: 767 PRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANG 826
Query: 90 -VGPKGPMLPLGPSGPVGPTSP 110
G +G GP G GPT P
Sbjct: 827 EKGARGVAGKPGPRGQRGPTGP 848
Score = 30.0 bits (66), Expect = 0.41
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
GP GPA G G +G G KG GP GP G P+
Sbjct: 1075 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1119
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/48 (37%), Positives = 18/48 (37%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G P G G GP GP G P G GP GP G G P
Sbjct: 1233 GGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1280
Score = 29.6 bits (65), Expect = 0.54
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 18 GTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGP 77
G +G +S +A+ + R++ P P G P GPVG G
Sbjct: 462 GDGSKGPTISAQEAQAQAILQQARIALRGPPGPMG--------LTGRP-GPVGGPGSSGA 512
Query: 78 GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G GP P G +GP P G G G
Sbjct: 513 KGESGDPGPQGPRGVQGPPGPTGKPGKRG 541
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/58 (34%), Positives = 23/58 (39%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
PR +G G G P GP+G GP G G GP+GP P P P
Sbjct: 1133 PRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGP 1190
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/56 (35%), Positives = 21/56 (37%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
P P P P G GP P G GP G G GP GP G V P+
Sbjct: 1454 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLPI 1509
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 76 GPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GP P GP G P G +GP P G G GP
Sbjct: 403 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGP 434
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG P G G GP P GP G G G + P G G GP L P
Sbjct: 567 PGLP-GDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGP 617
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ P P + GP GPA G P+G GP P G G G G +G
Sbjct: 1040 PQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED---GDKGEIG 1093
Score = 28.9 bits (63), Expect = 0.91
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GPVG P GP G G +G G G G GP P
Sbjct: 1069 GPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP 1112
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 44 PIFPFSPRSPF-QPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
PI P + P +P + PG+ P G G G +GP GP P+G GP G
Sbjct: 668 PIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG 727
Query: 101 PSGPVG 106
G G
Sbjct: 728 ADGVRG 733
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P G GPA P G G G G KG G +GP GP
Sbjct: 1070 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP 1112
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/45 (37%), Positives = 18/45 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
G G +G P G GP P G GP GPSG G L
Sbjct: 754 GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKL 798
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/51 (47%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 63 GSPWGPVGPASPLGP----GFPIGPMG-PGKPVGP--KGPMLPLGPSGPVG 106
G P GP G + GP GFP G G PG P KG P GP GPVG
Sbjct: 970 GDP-GPQGISGKDGPAGLRGFP-GERGLPGAQGAPGLKGGEGPQGPPGPVG 1018
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 38 GKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
GKT P+ P P P R P G G G P GPMGP G KG
Sbjct: 1351 GKT--GPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPG 1408
Query: 98 PLGPSGPVG 106
G G G
Sbjct: 1409 SKGEKGHPG 1417
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G +GP G G G G KG GP+GP+GP P
Sbjct: 1420 GLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGP 1463
Score = 26.9 bits (58), Expect = 3.5
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 24/73 (32%)
Query: 62 PGSPWGPVGPASPLG----------------------PGFP--IGPMGPGKPVGPKGPML 97
P P GP+G P G PGF +G G VG GP
Sbjct: 710 PPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRG 769
Query: 98 PLGPSGPVGPTSP 110
GP GP G P
Sbjct: 770 EDGPEGPKGRAGP 782
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 67 GPVGPASPLGP-GFPIGPMGPGKPV--GPKGPMLPLGPSGPVGPTSPLFP 113
GP G G G P PG G GP PLGP GP G P P
Sbjct: 1423 GPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGP 1472
Score = 26.6 bits (57), Expect = 4.5
Identities = 26/73 (35%), Positives = 27/73 (36%), Gaps = 30/73 (41%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMG-------------PGKPVGPKG-------PMLP---- 98
G P GP GP GP P G G PG+P G KG P LP
Sbjct: 517 GDP-GPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEP-GAKGDRGFDGLPGLPGDKG 574
Query: 99 ----LGPSGPVGP 107
GP GP GP
Sbjct: 575 HRGERGPQGPPGP 587
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 46.2 bits (108), Expect = 6e-06
Identities = 25/61 (40%), Positives = 27/61 (44%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTS 109
PR P PR GP G P G GP GP GP+GP P+G GP GP
Sbjct: 878 PRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG 937
Query: 110 P 110
P
Sbjct: 938 P 938
Score = 46.2 bits (108), Expect = 6e-06
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 62 PGSPWGPVG------PASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP+G P G +GPMGP P GP+GP P G GP GP
Sbjct: 1191 PGPP-GPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGP 1241
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/61 (40%), Positives = 27/61 (44%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P R P P R P G GP G P GP G P GP+GP+ GP GP G
Sbjct: 878 PRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG 937
Query: 107 P 107
P
Sbjct: 938 P 938
Score = 44.3 bits (103), Expect = 2e-05
Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMG-PGKP-----------VGPKGPMLPLGPSGPVGP 107
R P P GPVG P GP P G G PG P GP GP +GP GP G
Sbjct: 918 RGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE 977
Query: 108 TSPL 111
T P+
Sbjct: 978 TGPI 981
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG G VGP P GP P GP GP GP+GP +G G VG
Sbjct: 1202 LPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1252
Score = 42.4 bits (98), Expect = 8e-05
Identities = 26/58 (44%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 58 IPRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
+P T GSP G GPA PLGP P G GP P G KG P G G G P
Sbjct: 1475 LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGP 1532
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/54 (42%), Positives = 23/54 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
R P P G G P G P G G P GP G P GP GPVG P P
Sbjct: 882 RGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGP 935
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG P GP GPA G GP GP G +GP+ GP+GP G
Sbjct: 1073 LPGRPG-PQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAG 1120
Score = 40.4 bits (93), Expect = 3e-04
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
TPG+P P G A GP P G MGP GP G GP G GP P+ P
Sbjct: 659 TPGAPGQP-GMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGP 710
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/82 (36%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----PGFP-----------IGPMGPGKPVG 91
P P P P+ P GP GP P G PG P GP GPG VG
Sbjct: 911 PPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVG 970
Query: 92 PKGPMLPLGPSGPVGPTSPLFP 113
P+GP GP G G P P
Sbjct: 971 PQGPTGETGPIGERGHPGPPGP 992
Score = 40.4 bits (93), Expect = 3e-04
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 59 PRTPGSPW--GPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P GSP G G A P+G PG P GP GP P G KG GP GP G
Sbjct: 1053 PGPVGSPGERGSAGTAGPIGLPGRP-GPQGPPGPAGEKGAPGEKGPQGPAG 1102
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
P P GPVG G GP+G PG+P GP+GP P G G G P P
Sbjct: 1049 PQGPPGPVGSPGERGSAGTAGPIGLPGRP-GPQGPPGPAGEKGAPGEKGPQGP 1100
Score = 39.7 bits (91), Expect = 5e-04
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 59 PRTPGSPW-----GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P GP GP +GP GP G GP+G P GP GP G P
Sbjct: 660 PGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGP 716
Score = 39.7 bits (91), Expect = 5e-04
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P GP GP P G G GP P G G P+G GP GP
Sbjct: 1074 PGRP-GPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGP 1118
Score = 38.9 bits (89), Expect = 9e-04
Identities = 21/49 (42%), Positives = 22/49 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P GPVGP P G P G G PVG +G G GP GP P
Sbjct: 1388 PPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGP 1436
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/60 (40%), Positives = 24/60 (40%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P PR P P G G P GP GP GP PVG GP P GP G G
Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG 943
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 50 PRSPFQPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P + +P PG G G P GPG +GP GP GP G GP GP G
Sbjct: 936 PGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPG 994
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 49 SPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P +P QP + G P G +GP GP G GP GP+GP+ P G GP G
Sbjct: 659 TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQG 718
Score = 37.7 bits (86), Expect = 0.002
Identities = 20/49 (40%), Positives = 21/49 (42%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P P GP GP P GP GP GP VG G + G G G P
Sbjct: 1217 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGP 1265
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/53 (47%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG P P GPA G G G G PG+P GP GP GP GP G P
Sbjct: 1314 PGDPGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGPPGKRGP 1364
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 62 PGSPWGPVGPASPLGP-------GFPIGPMGPGKP-----VGPKGPMLPLGPSGPVGPTS 109
PG P GP+GP GP G P PG P G KG + P GP GP+G
Sbjct: 702 PG-PQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPG 760
Query: 110 P 110
P
Sbjct: 761 P 761
Score = 37.4 bits (85), Expect = 0.003
Identities = 26/55 (47%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
G P GP G P GP G GP GKP GPKG GP GP G P P P
Sbjct: 874 GKP-GPRGQRGPTGPRGSRGARGPTGKP-GPKGTSGGDGPPGPPGERGPQGPQGP 926
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGP------KGPMLPLGPSGPVGPTSPLFPFC 115
PG P GP GP+ GP P G GP G KG G GP G T P+ P
Sbjct: 1341 PGQP-GPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQG 1399
Query: 116 P 116
P
Sbjct: 1400 P 1400
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/46 (43%), Positives = 20/46 (43%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P GP GP GP P G G P G KG GP G GP
Sbjct: 1493 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1538
Score = 35.8 bits (81), Expect = 0.007
Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 17/77 (22%)
Query: 47 PFSPRSPFQPLIPRTPGSPWGPVGPASPLG----------------PGFPIGPMGPGKPV 90
P P P P P+ P GP GP +G PG P G G G P
Sbjct: 1217 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG-PPGEAGVGGPK 1275
Query: 91 GPKGPMLPLGPSGPVGP 107
G +G GP G GP
Sbjct: 1276 GERGEKGEAGPPGAAGP 1292
Score = 35.4 bits (80), Expect = 0.010
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 76 GPGFPIGPMG-PGKP--VGPKGPMLPLGPSGPVGPTSPLFP 113
GP PIG G PG P G G + P+GP GP GP P P
Sbjct: 1192 GPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGP 1232
Score = 35.4 bits (80), Expect = 0.010
Identities = 28/77 (36%), Positives = 30/77 (38%), Gaps = 25/77 (32%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----------------------PGK--PVGPKG 94
P PG P GP G A P GP GP G PGK PVGP+G
Sbjct: 1341 PGQPGPP-GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQG 1399
Query: 95 PMLPLGPSGPVGPTSPL 111
P GP G G P+
Sbjct: 1400 PAGKPGPEGLRGIPGPV 1416
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 67 GPVGPASPLGP-GFPIGPMGPGK-----PVGPKGPMLPLGPSGPVG 106
G GP LGP G P P PG P GPKG M P G GP G
Sbjct: 646 GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPG 691
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/45 (42%), Positives = 20/45 (44%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P G VGP P G PIG G P GP G G +G G
Sbjct: 962 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 1006
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 18/76 (23%)
Query: 53 PFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-------------PGKP-----VGPKG 94
P P P P P GP G P GP +G +G PG P GPKG
Sbjct: 1217 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG 1276
Query: 95 PMLPLGPSGPVGPTSP 110
G +GP G P
Sbjct: 1277 ERGEKGEAGPPGAAGP 1292
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P P G G P+G G G GP+GP GP GP G
Sbjct: 528 RGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTG 574
Score = 33.9 bits (76), Expect = 0.028
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPM----LPLGPSGPVGP--TSPLFPF 114
P GP GPA +GP GP GP G +GP LP G G GP T + PF
Sbjct: 443 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLP-GADGLPGPPGTMLMLPF 497
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG-PTSPLFP 113
G VG P G P GP G P G GP G G +G P P +P
Sbjct: 799 GEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYP 846
Score = 33.5 bits (75), Expect = 0.037
Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 21/90 (23%)
Query: 42 VSPIFPFSPRSPFQPLIPRTPGSPWGPVG---------------------PASPLGPGFP 80
V P+ P P P P P P GP G P G G P
Sbjct: 1215 VGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1274
Query: 81 IGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G GP G P G GP G P
Sbjct: 1275 KGERGEKGEAGPPGAAGPPGAKGPPGDDGP 1304
Score = 33.5 bits (75), Expect = 0.037
Identities = 18/40 (45%), Positives = 19/40 (47%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G A GP GP+GP P G GP G GPVG
Sbjct: 1378 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVG 1417
Score = 33.1 bits (74), Expect = 0.048
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL-FPFCP 116
PG P G G P G G GP GP G P G GP G P+ FP P
Sbjct: 1263 PGPP-GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDP 1317
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/44 (40%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G G P G P GP G GP G P G SG GP P
Sbjct: 871 GVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGP 914
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GP +GP GP G P+G +G P GP G G
Sbjct: 961 GPPGPGGVVGPQ---GPTGETGPIGERGHPGPPGPPGEQG 997
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/46 (41%), Positives = 20/46 (43%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P G G A P G P G GP GPKG P+G G GP
Sbjct: 1274 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1319
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/44 (38%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GP GP G P+G G G G P GP G GP P
Sbjct: 529 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGP 572
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 48 FSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGP----MGPGKPVGPKGPMLPLGPSG 103
F P P + I T + G G G + P GP P GP G M P G G
Sbjct: 401 FGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQG 460
Query: 104 PVGP 107
P GP
Sbjct: 461 PTGP 464
Score = 32.0 bits (71), Expect = 0.11
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 70 GPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP P GP +GP G P GP G GP G G
Sbjct: 442 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPG 478
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 58 IPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
+P PG G GP P GP G G +GP+G GP G +GP
Sbjct: 605 LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGP 656
Score = 32.0 bits (71), Expect = 0.11
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKG-PMLPLGPSGPVGPTS-PLFP 113
PR P GP G A P G P G G +G G P P G GP G T P FP
Sbjct: 806 PRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYP-GRQGPKGSTGFPGFP 861
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/52 (36%), Positives = 20/52 (38%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
P PG GP GP GP G GP P G +G G G G P
Sbjct: 962 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP 1013
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/42 (42%), Positives = 18/42 (42%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P G GP GP GP G PVG G P G GP G
Sbjct: 1286 PPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAG 1327
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/40 (45%), Positives = 18/40 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP GPA P G P G GP P G G P G G G
Sbjct: 442 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPG 481
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 16/66 (24%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMG----PGKP--------VGPKGPMLPL----GPS 102
P P P G +GP GP P G G PG+P GP G ML L G
Sbjct: 443 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGD 502
Query: 103 GPVGPT 108
G GPT
Sbjct: 503 GSKGPT 508
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G +G G IGP G P GPKG P G GP G
Sbjct: 790 GDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSG 829
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/48 (39%), Positives = 19/48 (39%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P P P GP G P GP G GP G G P G GP G
Sbjct: 1493 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPG 1540
Score = 31.2 bits (69), Expect = 0.18
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
R P P GP G G IGP G GP+G + P G G G
Sbjct: 618 RGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPG 664
Score = 31.2 bits (69), Expect = 0.18
Identities = 17/44 (38%), Positives = 18/44 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G GP GP GP G P G GP+ G GP G P
Sbjct: 1282 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGP 1325
Score = 31.2 bits (69), Expect = 0.18
Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 63 GSPWGPVG-PASPLGPGFPIGPMGPGKPVGPKG----PMLPLGPSGPVGPTSPLFP 113
G+P GPVG P P PG P GP G G KG P P GP GP G P P
Sbjct: 1306 GNP-GPVGFPGDPGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGP 1358
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/58 (34%), Positives = 24/58 (41%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P P + P+ P G G P G P GP+GP GP+G G G GP
Sbjct: 674 PPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGP 731
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 10/61 (16%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-------PGK--PVGPKGPMLPLGPSGPVGPTSPLF 112
PG P G GP P+GP GP G PG P G G G G +GP P
Sbjct: 696 PG-PQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQG 754
Query: 113 P 113
P
Sbjct: 755 P 755
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMG-PGK--PVGPKGPMLPLGPSGPVG 106
P P + P+ P GP+G GP P G G PG G KG P G SG G
Sbjct: 962 PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDG 1021
Query: 107 P 107
P
Sbjct: 1022 P 1022
Score = 30.8 bits (68), Expect = 0.24
Identities = 27/86 (31%), Positives = 29/86 (33%), Gaps = 36/86 (41%)
Query: 59 PRTPGSPWGPVG-------------PASPLGPGFPIGPMGPGKPVGPKGP---------- 95
P PG P GP G P P GP P G GP P G +GP
Sbjct: 1317 PGPPGEP-GPAGQDGVGGDKGEDGDPGQP-GPPGPSGEAGPPGPPGKRGPPGAAGAEGRQ 1374
Query: 96 -----------MLPLGPSGPVGPTSP 110
P G +GPVGP P
Sbjct: 1375 GEKGAKGEAGAEGPPGKTGPVGPQGP 1400
Score = 30.4 bits (67), Expect = 0.31
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 21/73 (28%)
Query: 59 PRTPGSPWGPVGPASPLGP-------GFPIGPMGPGKP--------------VGPKGPML 97
P P G GP GP GFP P PG+P G G
Sbjct: 1286 PPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPG 1345
Query: 98 PLGPSGPVGPTSP 110
P GPSG GP P
Sbjct: 1346 PPGPSGEAGPPGP 1358
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 21/82 (25%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLG----------PGFP--IGPMG----PGKP---- 89
PR P P+ P G GP+ G PG+P GP G PG P
Sbjct: 806 PRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANG 865
Query: 90 -VGPKGPMLPLGPSGPVGPTSP 110
G +G GP G GPT P
Sbjct: 866 EKGARGVAGKPGPRGQRGPTGP 887
Score = 30.0 bits (66), Expect = 0.41
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
GP GPA G G +G G KG GP GP G P+
Sbjct: 1114 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1158
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/48 (37%), Positives = 18/48 (37%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G P G G GP GP G P G GP GP G G P
Sbjct: 1272 GGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP 1319
Score = 29.6 bits (65), Expect = 0.54
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 18 GTSEEGNLLSTVSPTVKALFGKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGP 77
G +G +S +A+ + R++ P P G P GPVG G
Sbjct: 501 GDGSKGPTISAQEAQAQAILQQARIALRGPPGPMG--------LTGRP-GPVGGPGSSGA 551
Query: 78 GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G GP P G +GP P G G G
Sbjct: 552 KGESGDPGPQGPRGVQGPPGPTGKPGKRG 580
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/58 (34%), Positives = 23/58 (39%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFPFCP 116
PR +G G G P GP+G GP G G GP+GP P P P
Sbjct: 1172 PRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGP 1229
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/56 (35%), Positives = 21/56 (37%)
Query: 56 PLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
P P P P G GP P G GP G G GP GP G V P+
Sbjct: 1493 PAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLPI 1548
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 76 GPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
GP P GP G P G +GP P G G GP
Sbjct: 442 GPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGP 473
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
PG P G G GP P GP G G G + P G G GP L P
Sbjct: 606 PGLP-GDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGP 656
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 50 PRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ P P + GP GPA G P+G GP P G G G G +G
Sbjct: 1079 PQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED---GDKGEIG 1132
Score = 28.9 bits (63), Expect = 0.91
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
GPVG P GP G G +G G G G GP P
Sbjct: 1108 GPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP 1151
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 44 PIFPFSPRSPF-QPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLG 100
PI P + P +P + PG+ P G G G +GP GP P+G GP G
Sbjct: 707 PIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG 766
Query: 101 PSGPVG 106
G G
Sbjct: 767 ADGVRG 772
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P G GPA P G G G G KG G +GP GP
Sbjct: 1109 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP 1151
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/45 (37%), Positives = 18/45 (40%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPL 111
G G +G P G GP P G GP GPSG G L
Sbjct: 793 GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKL 837
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/51 (47%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 63 GSPWGPVGPASPLGP----GFPIGPMG-PGKPVGP--KGPMLPLGPSGPVG 106
G P GP G + GP GFP G G PG P KG P GP GPVG
Sbjct: 1009 GDP-GPQGISGKDGPAGLRGFP-GERGLPGAQGAPGLKGGEGPQGPPGPVG 1057
Score = 27.3 bits (59), Expect = 2.7
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 38 GKTRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPML 97
GKT P+ P P P R P G G G P GPMGP G KG
Sbjct: 1390 GKT--GPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPG 1447
Query: 98 PLGPSGPVG 106
G G G
Sbjct: 1448 SKGEKGHPG 1456
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
G +GP G G G G KG GP+GP+GP P
Sbjct: 1459 GLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGP 1502
Score = 26.9 bits (58), Expect = 3.5
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 24/73 (32%)
Query: 62 PGSPWGPVGPASPLG----------------------PGFP--IGPMGPGKPVGPKGPML 97
P P GP+G P G PGF +G G VG GP
Sbjct: 749 PPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRG 808
Query: 98 PLGPSGPVGPTSP 110
GP GP G P
Sbjct: 809 EDGPEGPKGRAGP 821
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 67 GPVGPASPLGP-GFPIGPMGPGKPV--GPKGPMLPLGPSGPVGPTSPLFP 113
GP G G G P PG G GP PLGP GP G P P
Sbjct: 1462 GPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGP 1511
Score = 26.6 bits (57), Expect = 4.5
Identities = 26/73 (35%), Positives = 27/73 (36%), Gaps = 30/73 (41%)
Query: 63 GSPWGPVGPASPLGPGFPIGPMG-------------PGKPVGPKG-------PMLP---- 98
G P GP GP GP P G G PG+P G KG P LP
Sbjct: 556 GDP-GPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEP-GAKGDRGFDGLPGLPGDKG 613
Query: 99 ----LGPSGPVGP 107
GP GP GP
Sbjct: 614 HRGERGPQGPPGP 626
>gi|39930511 collagen and calcium binding EGF domains 1 [Homo
sapiens]
Length = 406
Score = 46.2 bits (108), Expect = 6e-06
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 15/64 (23%)
Query: 58 IPRTPGSPWG--PVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPS-----------G 103
+P PG P G P G P G PGFP P PG+P GP+G M P+GPS G
Sbjct: 245 LPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQP-GPRGSMGPMGPSPDLSHIKQGRRG 303
Query: 104 PVGP 107
PVGP
Sbjct: 304 PVGP 307
Score = 37.7 bits (86), Expect = 0.002
Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 43 SPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPL-----GPGFPIGPMGPGKPVGPKGPML 97
SP FP P P QP P GP+GP+ L G P+GP G G KG
Sbjct: 266 SPGFPGMPGPPGQP----GPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERG 321
Query: 98 PLGPSGPVGP 107
GP G GP
Sbjct: 322 APGPRGSPGP 331
Score = 35.8 bits (81), Expect = 0.007
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPI--------GPMGPGKPVGPKGP 95
P P SP P +P PG P GP G P+GP + GP+GP G G
Sbjct: 258 PGSPGPKGSPGFPGMPGPPGQP-GPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGS 316
Query: 96 MLPLGPSGPVGPTSP 110
G GP G P
Sbjct: 317 KGERGAPGPRGSPGP 331
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 74 PLGPGFPIGPMGPGKPVGPKG----PMLPLGPSGPVGPTSPLFPFCP 116
P PG P G PG P GPKG P +P GP G GP + P P
Sbjct: 246 PGPPGLPGGQGPPGSP-GPKGSPGFPGMP-GPPGQPGPRGSMGPMGP 290
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 45.8 bits (107), Expect = 7e-06
Identities = 26/46 (56%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 62 PGSPWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG P GP GP G PG P GP GP P+GP G M P GP G VG
Sbjct: 1113 PGIP-GPSGPPGTKGLPGEP-GPQGPQGPIGPPGEMGPKGPPGAVG 1156
Score = 42.7 bits (99), Expect = 6e-05
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 46 FPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPV 105
FP P P PG P GP GP P+GP +GP GP VG G G G +
Sbjct: 1112 FPGIPGPSGPPGTKGLPGEP-GPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDL 1170
Query: 106 GP 107
GP
Sbjct: 1171 GP 1172
Score = 39.7 bits (91), Expect = 5e-04
Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
Query: 62 PGSPW--GPVGPASPLG----PGFPIGPMGP-------GKPVGPKGPMLPLGPSGPVGPT 108
PG P G G LG PG P GP GP G+P GP+GP P+GP G +GP
Sbjct: 1092 PGRPGQQGVAGERGHLGSRGFPGIP-GPSGPPGTKGLPGEP-GPQGPQGPIGPPGEMGPK 1149
Query: 109 SP 110
P
Sbjct: 1150 GP 1151
Score = 37.4 bits (85), Expect = 0.003
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 61 TPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
TPG P GP GP GP G G P GP GP G G GP P
Sbjct: 1040 TPGEP-GPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGP 1088
Score = 37.0 bits (84), Expect = 0.003
Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
PG P G P P GP P G GP G KG P GP GP G
Sbjct: 1032 PGMPGGMGTPGEP-GPQGPPGSRGPPGMRGAKGRRGPRGPDGPAG 1075
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-PGKP-----VGPKGPMLPLGPSGPVGP 107
PG P GP G +GP GP G GKP GP+G + P G GP+GP
Sbjct: 903 PGPP-GPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGP 953
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/48 (39%), Positives = 22/48 (45%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
P+ P P GP G P GP +G G G KG + PLG G G
Sbjct: 1133 PQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLGTPGEQG 1180
Score = 35.8 bits (81), Expect = 0.007
Identities = 27/62 (43%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 56 PLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKG----PMLPLGPSGPVGPTS 109
P IP G P G G P GP PIGP G P GP G P LP G +G G
Sbjct: 1113 PGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLP-GEAGMKGDLG 1171
Query: 110 PL 111
PL
Sbjct: 1172 PL 1173
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 12/56 (21%)
Query: 67 GPVGPASPLGP-GFP--IGPMGPGKPVGPK---------GPMLPLGPSGPVGPTSP 110
G +G P GP GFP IGP G P G K GP LGP G GP P
Sbjct: 898 GSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGP 953
Score = 34.7 bits (78), Expect = 0.017
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 21 EEGNLLSTVSPTVKALFGK--TRVSPIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG-P 77
E G+L S P + G T+ P P P+ P P+ P PG GP GP +G P
Sbjct: 1103 ERGHLGSRGFPGIPGPSGPPGTKGLPGEP-GPQGPQGPIGP--PGE-MGPKGPPGAVGEP 1158
Query: 78 GFP--------IGPMG-PGKP--VGPKGPMLPLGPSGPVGP 107
G P +GP+G PG+ +G +G G SGP+GP
Sbjct: 1159 GLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGP 1199
Score = 34.3 bits (77), Expect = 0.022
Identities = 30/67 (44%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 45 IFPFSPRSPFQPLIPRTPGSPWGPVGPASPLG----PGFPIGPMGPGKPVGPKG-PMLPL 99
IF + +PF PL+ PG P G G P G PG P G GP P GP G P LP
Sbjct: 611 IFHLAGSTPF-PLLMGPPG-PKGDCGLPGPPGLPGLPGIP-GARGPRGPPGPYGNPGLP- 666
Query: 100 GPSGPVG 106
GP G G
Sbjct: 667 GPPGAKG 673
Score = 33.5 bits (75), Expect = 0.037
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
Query: 65 PWGPVGPASPLG-PGFPIGPMGPGKPVGPKGPMLPLGP---------SGPVGPTSP 110
P G GP +G PG P G PG+P GP+GP GP GP GP P
Sbjct: 1019 PPGVPGPKGSMGHPGMPGGMGTPGEP-GPQGPPGSRGPPGMRGAKGRRGPRGPDGP 1073
Score = 33.5 bits (75), Expect = 0.037
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 65 PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
P G +GP+ GP G G GP+GP P G GP GP
Sbjct: 1575 PLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGP 1617
Score = 33.1 bits (74), Expect = 0.048
Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 44 PIFPFSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSG 103
P P S P +P G+P P GP P G P G G GP+GP P G G
Sbjct: 1020 PGVPGPKGSMGHPGMPGGMGTPGEP-GPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQG 1078
Query: 104 PVGPTSPLFP 113
G P P
Sbjct: 1079 SRGLKGPPGP 1088
Score = 33.1 bits (74), Expect = 0.048
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 12/75 (16%)
Query: 48 FSPRSPFQPLIPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPK------------GP 95
F P+ P + + P GP G G P+G +GP GPK GP
Sbjct: 1543 FGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGP 1602
Query: 96 MLPLGPSGPVGPTSP 110
P GP G GP P
Sbjct: 1603 RGPPGPRGRPGPPGP 1617
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 13/57 (22%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMG-PGKP-----------VGPKGPMLPLGPSGPVG 106
PG P GP G P G +GP G PG+ G KG + PLGP GP G
Sbjct: 1272 PGDP-GPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKG 1327
Score = 32.3 bits (72), Expect = 0.083
Identities = 20/47 (42%), Positives = 20/47 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSPLFP 113
G VGP LGP GP G G G P GP GP G P P
Sbjct: 1571 GIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGP 1617
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 67 GPVGPASPLGPGFPIGPMGP-GKPVGPKGPMLPLGPSGPVG----PTSPLFP 113
G VGP P GP G G GK GP GP GP G G P P +P
Sbjct: 1315 GIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYP 1366
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/78 (32%), Positives = 26/78 (33%), Gaps = 21/78 (26%)
Query: 60 RTPGSPWGPVGPASPLGPGFPIGPMG-PGKP--------------------VGPKGPMLP 98
R P P GP G G P GP G PG+P GP GP
Sbjct: 1065 RGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGT 1124
Query: 99 LGPSGPVGPTSPLFPFCP 116
G G GP P P P
Sbjct: 1125 KGLPGEPGPQGPQGPIGP 1142
Score = 31.6 bits (70), Expect = 0.14
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 13/60 (21%)
Query: 59 PRTPGSPWGPVGPASPLGPGFPIGPMGP-GKP-----------VGPKGPMLPLGPSGPVG 106
P PG+P GP G LGP G MG G+P VGP GP P G G G
Sbjct: 1275 PGPPGTP-GPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQG 1333
Score = 30.8 bits (68), Expect = 0.24
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 11/67 (16%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFP-----IGPMGPGKPVG------PKGPMLPLGPSGPVG 106
+P G P P GFP GP GP +G P+GP +G G VG
Sbjct: 1515 LPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1574
Query: 107 PTSPLFP 113
P L P
Sbjct: 1575 PLGILGP 1581
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 58 IPRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
+P PG+ P GP +G IG GP P G G + P G +GP G
Sbjct: 878 LPGFPGARGKP-GPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEG 925
Score = 30.0 bits (66), Expect = 0.41
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 44 PIFPFSPRSPFQPLIPRTPGS--PWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGP 101
P P +P +P PGS P G G GP P GP G G KGP P G
Sbjct: 1032 PGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGR 1091
Query: 102 SGPVG 106
G G
Sbjct: 1092 PGRPG 1096
Score = 29.6 bits (65), Expect = 0.54
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
PG P G G PLG G +G P GP+G +GP G GP
Sbjct: 879 PGFP-GARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGP 923
Score = 29.6 bits (65), Expect = 0.54
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
GP G P G G G P GP GP GP GP G
Sbjct: 1580 GPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGPPG 1619
Score = 28.9 bits (63), Expect = 0.91
Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 13/69 (18%)
Query: 59 PRTPGSPWGPVGPASPLGP----------GFPIGPMGPGKPVGPKGPMLPLGPSGPVG-P 107
P G P G +GP GP G P GP G P G +GPM P G G G P
Sbjct: 906 PGPEGFP-GDIGPPGDNGPEGMKGKPGARGLP-GPRGQLGPEGDEGPMGPPGAPGLEGQP 963
Query: 108 TSPLFPFCP 116
FP P
Sbjct: 964 GRKGFPGRP 972
Score = 28.9 bits (63), Expect = 0.91
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPTSP 110
G G P G P G MG PG P G P P GP GP G P
Sbjct: 1012 GDRGMMGPPGVPGPKGSMGHPGMPGGMGTPGEP-GPQGPPGSRGP 1055
Score = 28.5 bits (62), Expect = 1.2
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 19/70 (27%)
Query: 59 PRTPGSPWGPVGPASPLG-------PGF-----PIGPMGPGKPVGPKG----PMLP--LG 100
P PG P GPVG +G PG G MGP GPKG P +P +G
Sbjct: 981 PGDPGRP-GPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHPGMPGGMG 1039
Query: 101 PSGPVGPTSP 110
G GP P
Sbjct: 1040 TPGEPGPQGP 1049
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPT 108
GP+GP G GP G G +G M GP GP G T
Sbjct: 1195 GPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVT 1236
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 67 GPVGPASPLGP-GFPIGPMGPGKPVGPKGPMLPLGPSGPVG 106
G G LG G P P PG P GPKG LGP+G G
Sbjct: 1258 GAKGYQGQLGEMGVPGDPGPPGTP-GPKGSRGSLGPTGAPG 1297
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 67 GPVGPASPLGPGFPIGPMG-PGKPVGPKGPMLPLGPSGPVGPT 108
G G G +G MG PG P GP G P G G +GPT
Sbjct: 1252 GRTGAKGAKGYQGQLGEMGVPGDP-GPPGTPGPKGSRGSLGPT 1293
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/41 (39%), Positives = 17/41 (41%)
Query: 67 GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGP 107
G GP P G G GP G KG +G GP GP
Sbjct: 1192 GDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGP 1232
Score = 26.6 bits (57), Expect = 4.5
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 44 PIFP--FSPRSPFQPLIPRTPGSPW--GPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPL 99
P FP F R P P + PG GP G +G +GP+G P G KG M +
Sbjct: 789 PGFPGVFGERGP--PGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSV 846
Query: 100 GPSGPVG 106
G G G
Sbjct: 847 GEPGLKG 853
Score = 25.8 bits (55), Expect = 7.7
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 62 PGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPLGPSGPVGPTSP 110
PG P G G P G G +G P G G + LG GP+G P
Sbjct: 789 PGFP-GVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGP 836
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.142 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,008,305
Number of Sequences: 37866
Number of extensions: 489524
Number of successful extensions: 16096
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 392
Number of HSP's that attempted gapping in prelim test: 2339
Number of HSP's gapped (non-prelim): 7626
length of query: 116
length of database: 18,247,518
effective HSP length: 86
effective length of query: 30
effective length of database: 14,991,042
effective search space: 449731260
effective search space used: 449731260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.