FUBP1 9590

Name: FUBP1	Sequence: fasta or formatted (644aa)		NCBI GI: 17402900
Description: far upstream element-binding protein		Referenced in: RNA Polymerase and General Transcription Factors Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 59 2 C cysteine 0.5 3 1 D aspartate 4.7 30 2 E glutamate 4.2 27 2 F phenylalanine 1.6 10 1 G glycine 15.7 101 11 H histidine 1.7 11 2 I isoleucine 5.9 38 2 K lysine 4.3 28 2 L leucine 3.3 21 2 M methionine 2.3 15 1 N asparagine 3.7 24 1 P proline 13.0 84 3 Q glutamine 9.0 58 3 R arginine 4.5 29 1 S serine 3.7 24 2 T threonine 4.2 27 3 V valine 4.0 26 1 W tryptophan 0.9 6 1 Y tyrosine 3.6 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 far upstream element-binding protein KHSRP 0.596 KH-type splicing regulatory protein FUBP3 0.438 far upstream element (FUSE) binding protein 3 [Homo... PRB1 0.045 proline-rich protein BstNI subfamily 1 isoform 1 pre... PCBP4 0.044 poly(rC) binding protein 4 isoform c PCBP4 0.044 poly(rC) binding protein 4 isoform c PCBP3 0.043 poly(rC) binding protein 3 isoform 1 PRB2 0.041 proline-rich protein BstNI subfamily 2 IGF2BP2 0.040 insulin-like growth factor 2 mRNA binding protein 2 ... PCBP1 0.038 poly(rC) binding protein 1 PCBP2 0.038 poly(rC) binding protein 2 isoform e NOVA1 0.038 neuro-oncological ventral antigen 1 isoform 2 PCBP2 0.038 poly(rC) binding protein 2 isoform d PCBP3 0.038 poly(rC) binding protein 3 isoform 2 COL2A1 0.037 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.037 collagen, type II, alpha 1 isoform 2 precursor [Hom... NOVA2 0.037 neuro-oncological ventral antigen 2 IGF2BP3 0.037 insulin-like growth factor 2 mRNA binding protein 3 ... PCBP2 0.036 poly(rC) binding protein 2 isoform g PCBP2 0.036 poly(rC) binding protein 2 isoform b PCBP2 0.036 poly(rC) binding protein 2 isoform c TDRKH 0.036 tudor and KH domain containing isoform a TDRKH 0.036 tudor and KH domain containing isoform a TDRKH 0.036 tudor and KH domain containing isoform a COL18A1 0.035 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.035 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.035 alpha 1 type XVIII collagen isoform 1 precursor [Ho... IGF2BP2 0.035 insulin-like growth factor 2 mRNA binding protein 2 ... COL17A1 0.035 alpha 1 type XVII collagen PCBP2 0.034 poly(rC) binding protein 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.