LOC100290486 19579

Name: LOC100290486	Sequence: fasta or formatted (148aa)		NCBI GI: 239748381
Description: PREDICTED: hypothetical protein XP_002346646		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 5 1 C cysteine 3.4 5 2 D aspartate 2.0 3 1 E glutamate 3.4 5 1 F phenylalanine 5.4 8 2 G glycine 10.1 15 2 H histidine 4.7 7 1 I isoleucine 0.7 1 1 K lysine 2.0 3 1 L leucine 12.2 18 2 M methionine 2.0 3 1 N asparagine 1.4 2 1 P proline 16.2 24 1 Q glutamine 4.1 6 1 R arginine 3.4 5 1 S serine 13.5 20 3 T threonine 4.1 6 1 V valine 3.4 5 2 W tryptophan 2.7 4 1 Y tyrosine 2.0 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002346646 LOC100292975 1.000 PREDICTED: hypothetical protein LOC100288116 1.000 PREDICTED: hypothetical protein XP_002342482 LOC100293281 0.139 PREDICTED: similar to prostate collagen triple heli... LOC100133696 0.139 PREDICTED: similar to prostate collagen triple heli... LOC100287275 0.139 PREDICTED: hypothetical protein XP_002343272 PCOTH 0.139 prostate collagen triple helix isoform 2 PCOTH 0.139 prostate collagen triple helix isoform 1 UBQLN2 0.083 ubiquilin 2 COL1A1 0.073 alpha 1 type I collagen preproprotein FUBP1 0.070 far upstream element-binding protein COL18A1 0.066 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.066 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.066 alpha 1 type XVIII collagen isoform 1 precursor [Ho... WNK4 0.063 WNK lysine deficient protein kinase 4 IQSEC2 0.056 IQ motif and Sec7 domain 2 isoform1 COL5A2 0.056 alpha 2 type V collagen preproprotein ESX1 0.056 extraembryonic, spermatogenesis, homeobox 1-like [Ho... WDR33 0.056 WD repeat domain 33 isoform 1 RGL3 0.053 ral guanine nucleotide dissociation stimulator-like... LOC402382 0.053 PREDICTED: similar to hCG2040468 COL1A2 0.050 alpha 2 type I collagen POLR2A 0.050 DNA-directed RNA polymerase II A COL10A1 0.050 type X collagen alpha 1 precursor ODF1 0.050 outer dense fiber of sperm tails 1 COL25A1 0.050 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.050 collagen, type XXV, alpha 1 isoform 2 COL3A1 0.050 collagen type III alpha 1 preproprotein LOC100131880 0.050 PREDICTED: hypothetical protein COL17A1 0.050 alpha 1 type XVII collagen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.