UBQLN2 7004

Name: UBQLN2	Sequence: fasta or formatted (624aa)		NCBI GI: 16753207
Description: ubiquilin 2		Referenced in: Proteasome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 57 3 C cysteine 0.0 0 0 D aspartate 1.9 12 1 E glutamate 4.5 28 2 F phenylalanine 2.7 17 1 G glycine 8.3 52 2 H histidine 0.6 4 1 I isoleucine 5.4 34 2 K lysine 1.8 11 1 L leucine 8.5 53 2 M methionine 5.0 31 2 N asparagine 6.6 41 2 P proline 10.4 65 3 Q glutamine 10.1 63 3 R arginine 3.2 20 2 S serine 10.7 67 5 T threonine 7.1 44 3 V valine 3.2 20 1 W tryptophan 0.2 1 1 Y tyrosine 0.6 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquilin 2 UBQLN1 0.720 ubiquilin 1 isoform 1 UBQLN1 0.669 ubiquilin 1 isoform 2 UBQLN4 0.535 ataxin-1 ubiquitin-like interacting protein UBQLN3 0.308 ubiquilin 3 UBQLNL 0.159 ubiquilin-like LOC100293281 0.028 PREDICTED: similar to prostate collagen triple heli... LOC100133696 0.028 PREDICTED: similar to prostate collagen triple heli... LOC100287275 0.028 PREDICTED: hypothetical protein XP_002343272 PCOTH 0.028 prostate collagen triple helix isoform 2 WDR33 0.027 WD repeat domain 33 isoform 1 PCOTH 0.027 prostate collagen triple helix isoform 1 COL1A1 0.026 alpha 1 type I collagen preproprotein COL5A1 0.026 alpha 1 type V collagen preproprotein COL2A1 0.025 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.025 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL12A1 0.024 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.024 collagen, type XII, alpha 1 long isoform precursor [... COL1A2 0.023 alpha 2 type I collagen COL11A2 0.023 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 1 preproprotein ... EMID1 0.023 EMI domain containing 1 UBL7 0.023 ubiquitin-like 7 UBL7 0.023 ubiquitin-like 7 COL5A2 0.022 alpha 2 type V collagen preproprotein C1QTNF9B 0.022 C1q and tumor necrosis factor related protein 9B [Ho... C1QTNF9 0.022 C1q and tumor necrosis factor related protein 9 [Hom... LOC100292975 0.021 PREDICTED: hypothetical protein LOC100290486 0.021 PREDICTED: hypothetical protein XP_002346646 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.