PCOTH 34120

Name: PCOTH	Sequence: fasta or formatted (107aa)		NCBI GI: 62234340
Description: prostate collagen triple helix isoform 1		Referenced in: Collagen Prostate
Other entries for this name: alt prot [116aa] prostate collagen triple helix isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.9 2 1 C cysteine 0.9 1 1 D aspartate 0.0 0 0 E glutamate 1.9 2 2 F phenylalanine 6.5 7 1 G glycine 15.0 16 1 H histidine 0.0 0 0 I isoleucine 3.7 4 1 K lysine 3.7 4 1 L leucine 9.3 10 2 M methionine 3.7 4 1 N asparagine 1.9 2 1 P proline 24.3 26 1 Q glutamine 0.9 1 1 R arginine 2.8 3 1 S serine 10.3 11 1 T threonine 5.6 6 1 V valine 5.6 6 1 W tryptophan 1.9 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 prostate collagen triple helix isoform 1 PCOTH 0.971 prostate collagen triple helix isoform 2 LOC100293281 0.962 PREDICTED: similar to prostate collagen triple heli... LOC100133696 0.962 PREDICTED: similar to prostate collagen triple heli... LOC100287275 0.962 PREDICTED: hypothetical protein XP_002343272 LOC100292975 0.202 PREDICTED: hypothetical protein LOC100290486 0.202 PREDICTED: hypothetical protein XP_002346646 LOC100288116 0.202 PREDICTED: hypothetical protein XP_002342482 UBQLN2 0.154 ubiquilin 2 ESX1 0.144 extraembryonic, spermatogenesis, homeobox 1-like [Ho... COL1A1 0.135 alpha 1 type I collagen preproprotein WDR33 0.135 WD repeat domain 33 isoform 1 COL25A1 0.130 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.130 collagen, type XXV, alpha 1 isoform 2 C1QTNF9B 0.115 C1q and tumor necrosis factor related protein 9B [Ho... C1QTNF9 0.115 C1q and tumor necrosis factor related protein 9 [Hom... LOC402382 0.115 PREDICTED: similar to hCG2040468 FUBP1 0.115 far upstream element-binding protein COL7A1 0.111 alpha 1 type VII collagen precursor COL1A2 0.111 alpha 2 type I collagen COL5A2 0.111 alpha 2 type V collagen preproprotein COL3A1 0.106 collagen type III alpha 1 preproprotein COL2A1 0.106 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.106 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL17A1 0.106 alpha 1 type XVII collagen COL11A1 0.101 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.101 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.101 alpha 1 type XI collagen isoform A preproprotein [Ho... CCBE1 0.101 collagen and calcium binding EGF domains 1 COL27A1 0.101 collagen, type XXVII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.