Guide to the Human Genome
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Search of human proteins with 169168704

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169168704 PREDICTED: hypothetical protein LOC100128935 [Homo
sapiens]
         (284 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169168704 PREDICTED: hypothetical protein LOC100128935 [Homo ...   566   e-162
gi|169169647 PREDICTED: hypothetical protein LOC100128935 [Homo ...   562   e-160
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          55   9e-08
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               51   1e-06
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ...    51   1e-06
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s...    51   1e-06
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]               51   1e-06
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s...    50   3e-06
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa...    50   3e-06
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s...    50   3e-06
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]     48   9e-06
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     47   1e-05
gi|239757639 PREDICTED: similar to collagen, type I, alpha 2 [Ho...    47   2e-05
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                46   4e-05
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       45   6e-05
gi|11386161 alpha 2 type IX collagen [Homo sapiens]                    45   6e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      45   9e-05
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ...    45   9e-05
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ...    45   9e-05
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ...    45   9e-05
gi|239746652 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|119829187 alpha 1 type XVII collagen [Homo sapiens]                 44   2e-04
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho...    44   2e-04
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho...    44   2e-04
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho...    44   2e-04
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    43   3e-04
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    43   3e-04
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]      43   3e-04
gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens]       43   3e-04
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]         43   3e-04

>gi|169168704 PREDICTED: hypothetical protein LOC100128935 [Homo
           sapiens]
          Length = 284

 Score =  567 bits (1460), Expect = e-162
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MKRVTKSVLWGAGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLV 60
           MKRVTKSVLWGAGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLV
Sbjct: 1   MKRVTKSVLWGAGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLV 60

Query: 61  ADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVR 120
           ADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVR
Sbjct: 61  ADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVR 120

Query: 121 GLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI 180
           GLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI
Sbjct: 121 GLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI 180

Query: 181 QPKHGSQNERIRQVLDSLGKISSCSSQAAGRLDAVLRATITERSPSPPGPVEESNQPSGR 240
           QPKHGSQNERIRQVLDSLGKISSCSSQAAGRLDAVLRATITERSPSPPGPVEESNQPSGR
Sbjct: 181 QPKHGSQNERIRQVLDSLGKISSCSSQAAGRLDAVLRATITERSPSPPGPVEESNQPSGR 240

Query: 241 QAFLQVTAARMSDKLIKTAEWSTLPRKHPGEAIQEDKEEDKCIA 284
           QAFLQVTAARMSDKLIKTAEWSTLPRKHPGEAIQEDKEEDKCIA
Sbjct: 241 QAFLQVTAARMSDKLIKTAEWSTLPRKHPGEAIQEDKEEDKCIA 284


>gi|169169647 PREDICTED: hypothetical protein LOC100128935 [Homo
           sapiens]
          Length = 284

 Score =  562 bits (1449), Expect = e-160
 Identities = 282/284 (99%), Positives = 283/284 (99%)

Query: 1   MKRVTKSVLWGAGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLV 60
           MKRVTKSVLWGAGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLV
Sbjct: 1   MKRVTKSVLWGAGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLV 60

Query: 61  ADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVR 120
           ADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVR
Sbjct: 61  ADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVR 120

Query: 121 GLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI 180
           GLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI
Sbjct: 121 GLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI 180

Query: 181 QPKHGSQNERIRQVLDSLGKISSCSSQAAGRLDAVLRATITERSPSPPGPVEESNQPSGR 240
           QPKHGSQNERIRQVL+SLGKISSCSSQAAGRLDAVLRATITERSPSPPGPVEESNQPS R
Sbjct: 181 QPKHGSQNERIRQVLNSLGKISSCSSQAAGRLDAVLRATITERSPSPPGPVEESNQPSSR 240

Query: 241 QAFLQVTAARMSDKLIKTAEWSTLPRKHPGEAIQEDKEEDKCIA 284
           QAFLQVTAARMSDKLIKTAEWSTLPRKHPGEAIQEDKEEDKCIA
Sbjct: 241 QAFLQVTAARMSDKLIKTAEWSTLPRKHPGEAIQEDKEEDKCIA 284


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 54.7 bits (130), Expect = 9e-08
 Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 13/148 (8%)

Query: 15   GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
            G   V+ G       +G + +   RGL  D   R    DPG +G   +PG +G    PG+
Sbjct: 2520 GDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGL 2579

Query: 75   RGLV---ADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
            RGL+     P    +  DPG  G    PG+RG   D G  G       RG+  A    C 
Sbjct: 2580 RGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGA----CG 2635

Query: 132  QGGSRRESGARCIRRPAGVTAAPETAGH 159
              G + + G       AG    P  AGH
Sbjct: 2636 LDGEKGDKG------EAGPPGRPGLAGH 2657



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRG---LVADPGVRGLVADPVVRRL 86
            +G V    ++G   D  V  ++  PG RG   D G RG   L  D G RG   DP  +  
Sbjct: 2507 KGDVGSAGLKGDKGDSAV--ILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGS 2564

Query: 87   VADPGVRGLVADPGVRGLVADPGVRGLA 114
              +PG +G    PG+RGL+   G  G A
Sbjct: 2565 KGEPGDKGSAGLPGLRGLLGPQGQPGAA 2592



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 44/141 (31%), Positives = 54/141 (38%), Gaps = 15/141 (10%)

Query: 30   RGMVADPVVR--GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV---R 84
            +G   DP V   G    P    +  D G+ GL   PGV G     G RG +  P     R
Sbjct: 2365 KGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGER 2424

Query: 85   RLVADPGVRGL---VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR----QGGSRR 137
             L   PG  G+   +  PG  G V  PG  GL      +G     L G R    + G R 
Sbjct: 2425 GLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGD---KGDPGVGLPGPRGERGEPGIRG 2481

Query: 138  ESGARCIRRPAGVTAAPETAG 158
            E G      P G+T  P + G
Sbjct: 2482 EDGRPGQEGPRGLTGPPGSRG 2502



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 10/119 (8%)

Query: 50   LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP--GVRGLVAD 107
            LV +PG +G    PG RG   + G  G   DP        PG +G   DP  GV G    
Sbjct: 2322 LVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGP 2381

Query: 108  PGVRGLAAALMVRGLVAA-ALMGC-RQGGSRRE------SGARCIRRPAGVTAAPETAG 158
            PG  G+   L + GL  A  ++G   Q G R E      SG R +  P G    P   G
Sbjct: 2382 PGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLG 2440



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 36/112 (32%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            + +PGV G    PG  GL+   G RG    P  +    D G +G    PG+ G     G 
Sbjct: 2661 MGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPK---GDQGEKGERGTPGIGGFPGPSGN 2717

Query: 111  RGLAAALMVRGLVA----AALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             G A      G V       L G  Q G R   G R +  P GV  AP   G
Sbjct: 2718 DGSAGPPGPPGSVGPRGPEGLQG--QKGERGPPGERVVGAP-GVPGAPGERG 2766



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 36/108 (33%), Positives = 41/108 (37%), Gaps = 12/108 (11%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD---PGV 110
            PG  GL    G RGL   PGVRG V +   +    DPG  G    PG  G   D   PG 
Sbjct: 1645 PGDPGLPGKAGERGLRGAPGVRGPVGE---KGDQGDPGEDGRNGSPGSSGPKGDRGEPGP 1701

Query: 111  RGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             G    L+  G       G R+ G   + G    R P G    P   G
Sbjct: 1702 PGPPGRLVDTG------PGAREKGEPGDRGQEGPRGPKGDPGLPGAPG 1743



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
            RG   DP + G   +  +      PG +G   DPGVRG   + G RG         L   
Sbjct: 1730 RGPKGDPGLPGAPGERGIEGFRGPPGPQG---DPGVRGPAGEKGDRGPPGLDGRSGLDGK 1786

Query: 90   PGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            PG  G     G  G   DPG  GL      +GL
Sbjct: 1787 PGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGL 1819



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            + G +  P   G V  P    L  D G  G V  PG RG   +PG+RG    P       
Sbjct: 2435 IPGPLGPPGPPGSVGPPGASGLKGDKGDPG-VGLPGPRGERGEPGIRGEDGRP------G 2487

Query: 89   DPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGAR 142
              G RGL   PG RG   + G  G A     +G  A  L      G++ + G R
Sbjct: 2488 QEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGER 2541



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 14/90 (15%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVAD---PVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            PG RG   + G RG   +PG  G V     P +     DPG  G    PG RG + DPG 
Sbjct: 1331 PGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSG---PPGPRGPLGDPGP 1387

Query: 111  RGLAAALMVRGLVAAALMGCRQGGSRRESG 140
            RG        GL   A+ G +  G R E G
Sbjct: 1388 RG------PPGLPGTAMKGDK--GDRGERG 1409



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 32/106 (30%), Positives = 38/106 (35%), Gaps = 14/106 (13%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG+ GL   PG +G V  PG +G   D       ++ G  GL   PG  G     G  G
Sbjct: 1422 EPGLPGLPGSPGPQGPVGPPGKKGEKGD-------SEDGAPGLPGQPGSPGEQGPRGPPG 1474

Query: 113  LAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                   RG            G   E G R    PAG    P  AG
Sbjct: 1475 AIGPKGDRGFPGPL-------GEAGEKGERGPPGPAGSRGLPGVAG 1513



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 15/139 (10%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGV---RGLVADPGVRG---LVADPVVR 84
            G    P   G+  DP        PG+RG   D G    RGL  + GV+G   L  +   +
Sbjct: 2584 GPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDK 2643

Query: 85   RLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR----QGGSRRESG 140
                 PG  GL    G +G + +PGV G + A    GL+     G R    Q G + + G
Sbjct: 2644 GEAGPPGRPGLA---GHKGEMGEPGVPGQSGAPGKEGLIGP--KGDRGFDGQPGPKGDQG 2698

Query: 141  ARCIRRPAGVTAAPETAGH 159
             +  R   G+   P  +G+
Sbjct: 2699 EKGERGTPGIGGFPGPSGN 2717



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG RG     G RG   DPG+ G   +  +      PG +G   DPGVRG   + G RG
Sbjct: 1720 EPGDRG---QEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQG---DPGVRGPAGEKGDRG 1773



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 35/117 (29%), Positives = 43/117 (36%), Gaps = 3/117 (2%)

Query: 45   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVR-GLVADPGVRG 103
            PV  R     G  G    PG  G +  PG RGL  D         PG+  G    PG  G
Sbjct: 1972 PVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSG 2031

Query: 104  LVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
            L  +PG  G+       G V  A     +G  G + E G +    P G+   P   G
Sbjct: 2032 LAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPG 2088



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 15/92 (16%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD---------PGVRGLVAD 80
            +G   +  +RG V  P       DPG+ G    PG +G             PG  G    
Sbjct: 1256 KGEPGEMGLRGQVGPP------GDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGS 1309

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            P        PG  GL   PG+ G   DPG RG
Sbjct: 1310 PGRAGNPGTPGAPGLKGSPGLPGPRGDPGERG 1341



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 33/105 (31%), Positives = 39/105 (37%), Gaps = 11/105 (10%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG+ G     G  GL  +PG  G    P  R L    G  GL   PG  GLV   G  GL
Sbjct: 2191 PGLAGPAGPQGPSGLKGEPGETG----PPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGL 2246

Query: 114  AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
               +   G   A     R G S ++      R   GV  +P   G
Sbjct: 2247 PGQVGETGKPGAP---GRDGASGKDGD----RGSPGVPGSPGLPG 2284



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 32/103 (31%), Positives = 38/103 (36%), Gaps = 16/103 (15%)

Query: 55   GVRGLVA---DPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
            G+RG V    DPG+ G    PG +G       +     PG  G    PG  G    PG  
Sbjct: 1263 GLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAP 1322

Query: 112  GLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAP 154
            GL  +    GL           G R + G R  R P G   AP
Sbjct: 1323 GLKGS---PGL----------PGPRGDPGERGPRGPKGEPGAP 1352



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 23/60 (38%), Positives = 27/60 (45%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            DPG  G     G RG   + G +G    P    L    G RGL   PGVRG V + G +G
Sbjct: 1617 DPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQG 1676



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 45   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
            P  R +   PG R    +PG RG     G RG   DP +     + G+ G    PG +G 
Sbjct: 1704 PPGRLVDTGPGAREK-GEPGDRG---QEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQG- 1758

Query: 105  VADPGVRGLAAALMVRG 121
              DPGVRG A     RG
Sbjct: 1759 --DPGVRGPAGEKGDRG 1773



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 35/108 (32%), Positives = 40/108 (37%), Gaps = 8/108 (7%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            DPG+ G    PG RG+    G  G   DP VR    + G RG     G  GL   PG  G
Sbjct: 1735 DPGLPGA---PGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAG 1791

Query: 113  LAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
             +      G    A    R G  G R E G      P G+   P   G
Sbjct: 1792 PSGP---NGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDG 1836



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 9/61 (14%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG++G   +PG  G     G RG+   P ++    +PG RG   +PG+      PG RG+
Sbjct: 2110 PGLKGAKGEPGSNGDQGPKGDRGV---PGIKGDRGEPGPRGQDGNPGL------PGERGM 2160

Query: 114  A 114
            A
Sbjct: 2161 A 2161



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
            RG+  +  V+G         L  + G +G    PG  GL    G +G + +P V      
Sbjct: 2622 RGLKGERGVKGACG------LDGEKGDKGEAGPPGRPGLA---GHKGEMGEPGVPGQSGA 2672

Query: 90   PGVRGLVADPGVRGLVADPGVRG 112
            PG  GL+   G RG    PG +G
Sbjct: 2673 PGKEGLIGPKGDRGFDGQPGPKG 2695



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 35   DPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRG 94
            DP  +G   DP  R  +   G  G   D G  G   DPG  G       R    + G +G
Sbjct: 1584 DPGPKG---DPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKG 1640

Query: 95   LVADPGVRGLVADPGVRGLAAALMVRGLV 123
                PG  GL    G RGL  A  VRG V
Sbjct: 1641 DEGPPGDPGLPGKAGERGLRGAPGVRGPV 1669



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 41/139 (29%), Positives = 47/139 (33%), Gaps = 4/139 (2%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            VRG       RG        GL   P         G  G   DPG  GL   PG+RG   
Sbjct: 1762 VRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGL---PGLRGEQG 1818

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
             P        PG  G    PG+ G   +PG  G       +G   A+    R  G + E 
Sbjct: 1819 LPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRD-GPKGER 1877

Query: 140  GARCIRRPAGVTAAPETAG 158
            GA  I  P G    P   G
Sbjct: 1878 GAPGILGPQGPPGLPGPVG 1896



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 27/82 (32%), Positives = 29/82 (35%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G   DP VRG   +   R      G  GL   PG  G     G  G   DP    L    
Sbjct: 1755 GPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLR 1814

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G +GL    G  GL   PG  G
Sbjct: 1815 GEQGLPGPSGPPGLPGKPGEDG 1836



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGL--VADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
            PG++G   +PG RG   +PG+ G   +A P  +     PG++G    PG  G   DPG  
Sbjct: 2134 PGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGK-----PGLQGPRGPPGPVGGHGDPGPP 2188

Query: 112  G 112
            G
Sbjct: 2189 G 2189



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 8/91 (8%)

Query: 44   DPVVRRLVADPGVRGLVADPGVRGLVAD-----PGVRGLVADPVVRRLVADPGVRGLVAD 98
            +P +  L   PG +G V  PG +G   D     PG+ G    P  +     PG  G   D
Sbjct: 1422 EPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGD 1481

Query: 99   ---PGVRGLVADPGVRGLAAALMVRGLVAAA 126
               PG  G   + G RG       RGL   A
Sbjct: 1482 RGFPGPLGEAGEKGERGPPGPAGSRGLPGVA 1512



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 26/92 (28%), Positives = 32/92 (34%), Gaps = 3/92 (3%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G +    V G    P   GL+     R     PG +G   + G RG    PG+ G    
Sbjct: 2658 KGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERG---TPGIGGFPGP 2714

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                     PG  G V   G  GL    G RG
Sbjct: 2715 SGNDGSAGPPGPPGSVGPRGPEGLQGQKGERG 2746



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 36/119 (30%), Positives = 41/119 (34%), Gaps = 22/119 (18%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLV------ADPGVRGLVADPGVR 75
            G V      G   DP + G   +   R L   PGVRG V       DPG  G    PG  
Sbjct: 1634 GEVGEKGDEGPPGDPGLPGKAGE---RGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSS 1690

Query: 76   GLVAD--------PVVRRLVADPGVR-----GLVADPGVRGLVADPGVRGLAAALMVRG 121
            G   D        P  R +   PG R     G     G RG   DPG+ G      + G
Sbjct: 1691 GPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEG 1749



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 54   PGVRGLVADPGVRGLVAD-----PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 108
            PG+ G    PG+ G V       PGV G       R      G +GL   PG RGL  +P
Sbjct: 1880 PGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGL---PGERGLRGEP 1936

Query: 109  G-VRGLAAALMVRGLVAAAL 127
            G V  +   L   G+ A+AL
Sbjct: 1937 GSVPNVDRLLETAGIKASAL 1956



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G    P ++    +PG  G     G RG+   PG++G   +P  R    +PG+ G 
Sbjct: 2101 PGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGV---PGIKGDRGEPGPRGQDGNPGLPG- 2156

Query: 96   VADPGVRGLVADPGVRG 112
              + G+ G    PG++G
Sbjct: 2157 --ERGMAGPEGKPGLQG 2171



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            ++G   +P  RG   +P    L  + G+ G    PG++G    PG  G   DP       
Sbjct: 2136 IKGDRGEPGPRGQDGNP---GLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDP---GPPG 2189

Query: 89   DPGVRGLVADPGVRGLVADPGVRG 112
             PG+ G     G  GL  +PG  G
Sbjct: 2190 APGLAGPAGPQGPSGLKGEPGETG 2213



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/96 (29%), Positives = 30/96 (31%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P  RGL        L   PG  GLV   G  GL    G  G    P         G RG 
Sbjct: 2214 PPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGS 2273

Query: 96   VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
               PG  GL    G +G        G     L G +
Sbjct: 2274 PGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAK 2309



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 31   GMVADPVVRGLVADPVVRRLVAD-----PGVRGLVADPGVRGLVADPGVRGLVADPVVRR 85
            G+   P  +G V  P  +    D     PG+ G    PG +G    PG  G   D     
Sbjct: 1427 GLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPG 1486

Query: 86   LVADPGVRGLVADPGVRGLVADPGVRGLAAA 116
             + + G +G    PG  G    PGV G   A
Sbjct: 1487 PLGEAGEKGERGPPGPAGSRGLPGVAGRPGA 1517



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 40/144 (27%), Positives = 51/144 (35%), Gaps = 12/144 (8%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG+   +   G+   P   GLV           PG+ G V + G  G     G  G   D
Sbjct: 2217 RGLTGPTGAVGLPGPPGPSGLVGPQ------GSPGLPGQVGETGKPGAPGRDGASGKDGD 2270

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPG--VRGLAAALMVRGL---VAAALMG-CRQGG 134
                 +   PG+ G V   G  G    PG  V GL  A   +G    +A  L+G     G
Sbjct: 2271 RGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKG 2330

Query: 135  SRRESGARCIRRPAGVTAAPETAG 158
             R   G R  +  AG    P   G
Sbjct: 2331 DRGLPGPRGEKGEAGRAGEPGDPG 2354



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G +G    PG+ G    PG+ G V  P        PGV G     G RG     G +GL 
Sbjct: 1872 GPKGERGAPGILGPQGPPGLPGPVGPPG----QGFPGVPGGTGPKGDRGETGSKGEQGLP 1927

Query: 115  AALMVRG 121
                +RG
Sbjct: 1928 GERGLRG 1934



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 28/101 (27%), Positives = 36/101 (35%), Gaps = 10/101 (9%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  G   + G RG     G RGL        +   PG +G    PG  G   + G  G 
Sbjct: 1485 PGPLGEAGEKGERGPPGPAGSRGLPG------VAGRPGAKGPEGPPGPTGRQGEKGEPGR 1538

Query: 114  AAALMVRGLVAAALMGCR----QGGSRRESGARCIRRPAGV 150
                 V G   A   G +      G R  +G +  R P G+
Sbjct: 1539 PGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGL 1579



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 15/116 (12%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVAD---PVVRRLVADPGVRGLVA---DPGVRGLVAD 107
            PG  GL  +PG  G+   PG  G V +   P  R    + G RG       PG+ G    
Sbjct: 2027 PGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGP 2086

Query: 108  PGVRGLAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
            PG  G   ++   G     L G  QG     G++ E G+   + P G    P   G
Sbjct: 2087 PGPPGPKVSVDEPG---PGLSG-EQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKG 2138


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 41/84 (48%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG +  P + GL      R L   PG RG +  PG  G+  + G  GL  +P    L   
Sbjct: 756 RGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGP 815

Query: 90  PGVRGLVADPGVRGLVADPGVRGL 113
           PGV GL+ D GV G +  PG +G+
Sbjct: 816 PGVPGLIGDLGVLGPIGYPGPKGM 839



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG+      RG +  P   G+  +     L  +PG  GL   PGV GL+ D GV G +  
Sbjct: 774 RGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGY 833

Query: 81  PVVRRL------VADPGVRGLVADPGVRGLVADPGVRG 112
           P  + +      V +PG++G   + GV G+  DPG +G
Sbjct: 834 PGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQG 871



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG +    + G+      RGL   P  R  +  PG  G+  + G  GL  +PG  GL   
Sbjct: 756 RGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGP 815

Query: 81  PVVRRLVADPGVRGLVADPGVRGL------VADPGVRG 112
           P V  L+ D GV G +  PG +G+      V +PG++G
Sbjct: 816 PGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKG 853



 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 35/101 (34%), Positives = 44/101 (43%), Gaps = 6/101 (5%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G      + G V DP  +G       R  +  PG+ GL    G RGL   PG RG +  
Sbjct: 735 KGYPGRQGLPGPVGDPGPKGS------RGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGM 788

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
           P    +  + G  GL  +PG  GL   PGV GL   L V G
Sbjct: 789 PGFPGVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLG 829



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGL------VADPGVRGLVADPVVR 84
           G+  +P   GL   P V  L+ D GV G +  PG +G+      V +PG++G   +  V 
Sbjct: 802 GLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVP 861

Query: 85  RLVADPGVRGLVADPGVRGLVADPGVRG 112
            +  DPG +G   D G +GL   PG RG
Sbjct: 862 GVSGDPGFQG---DKGSQGLPGFPGARG 886



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 51  VADPGV---RGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 107
           V DPG    RG +  PG+ GL    G RGL   P  R  +  PG  G+  + G  GL  +
Sbjct: 747 VGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGN 806

Query: 108 PGVRGLAAALMVRGLV 123
           PG  GL     V GL+
Sbjct: 807 PGELGLPGPPGVPGLI 822



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG V +   RG   DP   G      V+ L   PG +G    PG RG     G +G    
Sbjct: 1348 RGPVGDRGDRGEPGDP---GYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGP 1404

Query: 81   PVVRRLVADP---GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRR 137
               +     P   GV+GL   PG RG+V   G+ G+A    + G    A     Q G + 
Sbjct: 1405 KGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQA----GQQGEQG 1460

Query: 138  ESGARCIRRPAGVTAAPETAG 158
            + G      PAG    P  AG
Sbjct: 1461 DDGDPGPMGPAGKRGNPGVAG 1481



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  GLV +PG+ G   D G+ G    P  +  +  PG+ G +  PG  G    PG RG  
Sbjct: 997  GFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPP 1056

Query: 115  AALMVRGLVAAALMGCR-QGGSRRESGARCIRRPAGVTAAPETAG-HGLWRHGGH 167
                +RG  A    G R   G   E G+R ++ P G    P   G  G+    GH
Sbjct: 1057 G---MRG--AKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGH 1106



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 22/129 (17%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            GM   P  RGL            PG RG +   G  G +  PG  GL   P  +     P
Sbjct: 925  GMKGKPGARGL------------PGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRP 972

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
            G+ G+  +PG  G     G +G    +   GLV        + G   E G R +  P GV
Sbjct: 973  GLDGVKGEPGDPGRPGPVGEQGFMGFI---GLVG-------EPGIVGEKGDRGMMGPPGV 1022

Query: 151  TAAPETAGH 159
                 + GH
Sbjct: 1023 PGPKGSMGH 1031



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 23/190 (12%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVAD------PVVRRLVADPGVRGLVADPGVRGLVAD 107
            PG RG     G+ G   +PG +G   D      P +  L    G  G +   G++G    
Sbjct: 1504 PGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGP 1563

Query: 108  PGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAGHGLWRHG 165
            PG+ G    +   G++  + +   +G  GSR + G +  R P G    P   G      G
Sbjct: 1564 PGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPG----PPG 1619

Query: 166  G-----HEMVSASDRCWMD----IQPKHGSQNERIRQVLDSLGKISSCSSQAAGRLDAVL 216
            G      + + A+ + WMD    ++P+  S  +R+  VLD  G+I       +  + ++ 
Sbjct: 1620 GPIQLQQDDLGAAFQTWMDTSGALRPESYSYPDRL--VLDQGGEIFKTLHYLSNLIQSIK 1677

Query: 217  RATITERSPS 226
                T+ +P+
Sbjct: 1678 TPLGTKENPA 1687



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG +G     G+ G V DPG +G       R  +  PG+ GL    G RGL   PG RG
Sbjct: 732 PGAKGYPGRQGLPGPVGDPGPKGS------RGYIGLPGLFGLPGSDGERGLPGVPGKRG 784



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 38/128 (29%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G V +P ++G   +  V  +  DPG +G   D G +GL   PG RG    P     V D 
Sbjct: 844 GSVGEPGLKGDKGEQGVPGVSGDPGFQG---DKGSQGLPGFPGARG---KPGPLGKVGDK 897

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
           G  G    PG  G   D G  G      ++G   A  +     G R + G      P G 
Sbjct: 898 GSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGL----PGPRGQLGPEGDEGPMGP 953

Query: 151 TAAPETAG 158
             AP   G
Sbjct: 954 PGAPGLEG 961



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G  G+   PG RGL   PG RG +        +  PG  GL   PG +G    PG+ G
Sbjct: 920 DNGPEGMKGKPGARGL---PGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 976

Query: 113 L 113
           +
Sbjct: 977 V 977



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 3/76 (3%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRG---LVADPGVRGLVADPVVRRLVADPGVRGLV 96
           GL   P +  L   PG RG    PG  G   L   PG +G   DP +    A  G +G +
Sbjct: 634 GLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSPGKAHDGAKGDM 693

Query: 97  ADPGVRGLVADPGVRG 112
             PG+ G    PG +G
Sbjct: 694 GLPGLSGNPGPPGRKG 709



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 24/85 (28%), Positives = 36/85 (42%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
            RG+   P  +G    P  + +  + G  G    PG+ G    PG +GL  +P  +     
Sbjct: 1080 RGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGP 1139

Query: 90   PGVRGLVADPGVRGLVADPGVRGLA 114
             G  G +   G  G V +PG+ G A
Sbjct: 1140 IGPPGEMGPKGPPGAVGEPGLPGEA 1164



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G   D G  G+   PG RGL   P  R  +   G  G +  PG  GL   PG +G
Sbjct: 912 PGDIGPPGDNGPEGMKGKPGARGL---PGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKG 967



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD- 89
           G+   P  +G   DP +    A  G +G +  PG+ G    PG +G    P       + 
Sbjct: 664 GLPGPPGAKGQKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQ 723

Query: 90  --------PGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
                   PG +G     G+ G V DPG +G    + + GL
Sbjct: 724 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGL 764



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 25  ANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVR 84
           A+   +G +  P + G    P  +     PG  G   + G  G    PG +G      + 
Sbjct: 685 AHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLP 744

Query: 85  RLVADPGV---RGLVADPGVRGLVADPGVRGLAAALMVRG 121
             V DPG    RG +  PG+ GL    G RGL      RG
Sbjct: 745 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 784



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G   D  + GL  +P        PG +G    PG  G   + G  G    P  +      
Sbjct: 688 GAKGDMGLPGLSGNP------GPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQ 741

Query: 91  GVRGLVADPGV---RGLVADPGVRGLAAALMVRGL 122
           G+ G V DPG    RG +  PG+ GL  +   RGL
Sbjct: 742 GLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGL 776



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 9/67 (13%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD---------PGVRGLVADPGVRGLV 105
            G  G   + G RGL   PG +G    P  + +  +         PG+ G    PG +GL 
Sbjct: 1069 GPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLP 1128

Query: 106  ADPGVRG 112
             +PG +G
Sbjct: 1129 GEPGPQG 1135



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 19/60 (31%), Positives = 26/60 (43%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PGV GL    G  G   + G+ G +  P  R      G+ G   +PG +G   D G  G
Sbjct: 1476 NPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMG 1535



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 10/92 (10%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPG----VRGLVADPGVRGLVADPVVRRL 86
            G   +P + G      +   +  PG +G   + G      G    PG RG V D   R  
Sbjct: 1300 GAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGE 1359

Query: 87   VADP------GVRGLVADPGVRGLVADPGVRG 112
              DP      GV+GL   PG +G    PG RG
Sbjct: 1360 PGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRG 1391



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 22/78 (28%), Positives = 32/78 (41%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G    P  + L  +PG +G     G  G +   G  G V +P +       G  G 
Sbjct: 1113 PGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGP 1172

Query: 96   VADPGVRGLVADPGVRGL 113
            +  PG +GL+   G  GL
Sbjct: 1173 LGTPGEQGLIGQRGEPGL 1190



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 23/84 (27%), Positives = 33/84 (39%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            + G    P  +GL  +P  +      G  G +   G  G V +PG+ G          + 
Sbjct: 1115 IPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLG 1174

Query: 89   DPGVRGLVADPGVRGLVADPGVRG 112
             PG +GL+   G  GL  D G  G
Sbjct: 1175 TPGEQGLIGQRGEPGLEGDSGPMG 1198



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 13/81 (16%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD-------------PGVRGLVADPG 100
            PG  G   +PG+ G     G+ G +  P  +    +             PG RG V D G
Sbjct: 1296 PGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1355

Query: 101  VRGLVADPGVRGLAAALMVRG 121
             RG   DPG  G      +RG
Sbjct: 1356 DRGEPGDPGYPGQEGVQGLRG 1376



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 34/126 (26%), Positives = 47/126 (37%), Gaps = 5/126 (3%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPG---VRGLVADPGVRG 76
            V+G+      +G    P  RG       +      G +G    PG   V+GL   PG RG
Sbjct: 1371 VQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRG 1430

Query: 77   LVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--G 134
            +V    +  +    G+ G     G +G   D G  G       RG    A +   QG  G
Sbjct: 1431 VVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPG 1490

Query: 135  SRRESG 140
             + ESG
Sbjct: 1491 FKGESG 1496



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 21/122 (17%)

Query: 22   GMVANSVVRGMVADPVV---RGLVADPVVRRLVADPGVRGLVADPGVRGL---------- 68
            G+V     RGM+  P V   +G +  P +   +  PG  G    PG RG           
Sbjct: 1006 GIVGEKGDRGMMGPPGVPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRR 1065

Query: 69   --------VADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVR 120
                      + G RGL   P  +     PG +G+  + G  G    PG+ G +     +
Sbjct: 1066 GPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGTK 1125

Query: 121  GL 122
            GL
Sbjct: 1126 GL 1127



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG +GL+   G  GL  D G  G      ++    DPG  G   + G  GL+ + G  G 
Sbjct: 1176 PGEQGLIGQRGEPGLEGDSGPMG---PDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGP 1232

Query: 114  AAALMVRG 121
                 VRG
Sbjct: 1233 PGVTGVRG 1240



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 53   DPGVRGLVA---DPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
            DPG  G      +PGV GL    G  G   +  +   +  PG RG     G+ G   +PG
Sbjct: 1464 DPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPG 1523

Query: 110  VRG 112
             +G
Sbjct: 1524 SKG 1526



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L+  PG +G    PG  GL   PG+ G            +PG+ G    PG +G   DPG
Sbjct: 623 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPG---PPGAKGQKGDPG 679

Query: 110 V 110
           +
Sbjct: 680 L 680



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V +PG+ G     G  G +  PG +GL+       L  D G  G     G++G   DPG 
Sbjct: 1155 VGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMG---PDGLKGDRGDPGP 1211

Query: 111  RG 112
             G
Sbjct: 1212 DG 1213



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 38   VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD--------PVVRRLVAD 89
            V+GL   P  R +V   G+ G+    G+ G     G +G   D        P  +R   +
Sbjct: 1419 VQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR--GN 1476

Query: 90   PGVRGLVADPGVRGLVADPGVRGLAAAL 117
            PGV GL   PG +G     G  GL   L
Sbjct: 1477 PGVAGL---PGAQGPPGFKGESGLPGQL 1501



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 19/58 (32%), Positives = 24/58 (41%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G  G V +PG+ G     G  G +  P  + L+   G  GL  D G  G     G RG
Sbjct: 1150 GPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRG 1207



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVAD---PVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
            G  G+  DPG  G     G RG +     P       +PG+ G     G+ G +  PG +
Sbjct: 1267 GEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPK 1326

Query: 112  G 112
            G
Sbjct: 1327 G 1327


>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
           sapiens]
          Length = 1691

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG++GL  +PG+ GL   PG  G+   P +     + G  G V  PG+ GL   PG RGL
Sbjct: 863 PGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGL 922

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHG 165
                  G +  +     + G+  E G R    P G+  +P      LW  G
Sbjct: 923 KGIPGSTGKMGPS----GRAGTPGEKGDRGNPGPVGI-PSPRRPMSNLWLKG 969



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 25/69 (36%), Positives = 31/69 (44%)

Query: 45   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
            P    +   PG  GL    G+ GL  DPG +G V     + L   PG  G    PG  G 
Sbjct: 1370 PTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGA 1429

Query: 105  VADPGVRGL 113
            + DPG+ GL
Sbjct: 1430 LGDPGLPGL 1438



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 8/143 (5%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPG---VRGLVADPGVRGLVADPGVRGLV 78
           G V N+   G    P   GL+  P ++    D G    +G    PG+ G +   G +G  
Sbjct: 486 GGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKK 545

Query: 79  ADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRE 138
            +P++  +   PG RG     G RG++ +PG  G+     + G     L G    G   E
Sbjct: 546 GEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPG-----LPGDGGQGFPGE 600

Query: 139 SGARCIRRPAGVTAAPETAGHGL 161
            G   +    G    P   G+GL
Sbjct: 601 KGLPGLPGEKGHPGPPGLPGNGL 623



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 10/94 (10%)

Query: 27  SVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD-----PGVRGLVADP 81
           S ++GM  D   RG       R ++ +PG  G+   PG+ GL  D     PG +GL   P
Sbjct: 551 STIQGMPGD---RGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLP 607

Query: 82  VVRRLVADPGV--RGLVADPGVRGLVADPGVRGL 113
             +     PG+   GL   PG RGL  D G  GL
Sbjct: 608 GEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGL 641



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G   + V +G+   P ++GL  +P +  L   PG  G+   P + G   + G  G V  
Sbjct: 851 KGPPGSIVKKGL---PGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGF 907

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           P +  L   PG RGL   PG  G +   G  G
Sbjct: 908 PGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAG 939



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 19/152 (12%)

Query: 12   AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
            +G   +L ++GM       G +  P   G   DP        PG++G     G  GL  D
Sbjct: 1315 SGLPGELGLKGMRGEP---GFMGTPGKVGPPGDP------GFPGMKGKAGPRGSSGLQGD 1365

Query: 72   PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
            PG       P    +   PG  GL    G+ GL  DPG +G       +GL         
Sbjct: 1366 PG-----QTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGP 1420

Query: 132  QG-----GSRRESGARCIRRPAGVTAAPETAG 158
             G     G+  + G   ++ P G   AP   G
Sbjct: 1421 SGLPGPPGALGDPGLPGLQGPPGFEGAPGQQG 1452



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G+  N  + G+   P   G+   P +     + G  G V  PG+ GL   PG RGL  
Sbjct: 865  LKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKG 924

Query: 80   DPVVRRLVADPGVRGLVADPGVR---GLVADPGVRGLAAALMVRGLVAAALMGCRQG--G 134
             P     +   G  G   + G R   G V  P  R   + L ++G   +       G  G
Sbjct: 925  IPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPG 984

Query: 135  SRRESGARCIRRPAGVTAAPETAG 158
             R + G      P G+  AP   G
Sbjct: 985  PRGDKGEAGRPGPPGLPGAPGLPG 1008



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 12/80 (15%)

Query: 37  VVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV 96
           V+ G   DP V      PG+ GL  D G++GL    GV GL A      L   PG  G  
Sbjct: 356 VISGNPGDPGV------PGLPGLKGDEGIQGLRGPSGVPGLPA------LSGVPGALGPQ 403

Query: 97  ADPGVRGLVADPGVRGLAAA 116
             PG++G   +PG   + AA
Sbjct: 404 GFPGLKGDQGNPGRTTIGAA 423



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 23/64 (35%), Positives = 28/64 (43%)

Query: 50   LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
            L  DPG +G V   G +GL   PG  G    P     + DPG+ GL   PG  G     G
Sbjct: 1393 LTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPGQQG 1452

Query: 110  VRGL 113
              G+
Sbjct: 1453 PFGM 1456



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 38   VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
            + GL  DP  +  V   G +GL   PG  G    PG  G + DP +  L   PG  G   
Sbjct: 1390 IPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGA-- 1447

Query: 98   DPGVRGLVADPGVRG 112
             PG +G    PG+ G
Sbjct: 1448 -PGQQGPFGMPGMPG 1461



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 14/147 (9%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G++ N    G   +    G+  D  +      PGV G+  +PG+ G     G  G +  P
Sbjct: 1100 GLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSP 1159

Query: 82   VV---RRLVADPGVRGLVADPGVRG--------LVADPGVRGLAAALMVRGLVAAALMGC 130
             +   +     PG+ GL   PG +G        +   PG  GL      +G     +   
Sbjct: 1160 GLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAP 1219

Query: 131  RQGGSRRESGAR---CIRRPAGVTAAP 154
             + G R + G R    ++ PAG+  AP
Sbjct: 1220 GKPGLRGQKGDRGFPGLQGPAGLPGAP 1246



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           + G +G+   PG RG +   GV+G       +  +  PG+ G     G+ G   D G+ G
Sbjct: 289 EKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGF---QGIEGQKGDIGLPG 345

Query: 113 LAAALMVRGLVAAALMG----CRQGGSRRESGARCIRRPAGVTAAPETAG 158
               + + G V +   G        G + + G + +R P+GV   P  +G
Sbjct: 346 PDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSG 395



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 18/147 (12%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP-------- 81
           +G+   P  RG +    V+      G +G +  PG+ G     G +G +  P        
Sbjct: 293 KGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDI 352

Query: 82  ---VVRRLVADPGVRGLVA---DPGVRGLVADPGVRGLAAALMVRGLVA----AALMGCR 131
              V+     DPGV GL     D G++GL    GV GL A   V G +       L G +
Sbjct: 353 DGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQ 412

Query: 132 QGGSRRESGARCIRRPAGVTAAPETAG 158
               R   GA  +    G+   P   G
Sbjct: 413 GNPGRTTIGAAGLPGRDGLPGPPGPPG 439



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G+   PG +G     G  G +    +      PG++GL  +PG+ GL   PG  G+
Sbjct: 833 PGFPGISGHPGKKGTRGKKGPPGSIVKKGL------PGLKGLPGNPGLVGLKGSPGSPGV 886

Query: 114 AAALMVRG 121
           A    + G
Sbjct: 887 AGLPALSG 894



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            DPG  G+    G +G    PG  GL  +  ++ +  +PG  G    PG  G   DPG  G
Sbjct: 1293 DPGFPGIPGPKGPKGDQGIPGFSGLPGELGLKGMRGEPGFMGT---PGKVGPPGDPGFPG 1349

Query: 113  LAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            +      RG          QG   +   A  ++ P G    P   G
Sbjct: 1350 MKGKAGPRGSSGL------QGDPGQTPTAEAVQVPPGPLGLPGIDG 1389



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G   DP    +    G +G    PG  GL  + G++G+  +P     +  PG  G   D
Sbjct: 1288 QGDTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLKGMRGEP---GFMGTPGKVGPPGD 1344

Query: 99   PGVRGLVADPGVRG 112
            PG  G+    G RG
Sbjct: 1345 PGFPGMKGKAGPRG 1358



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            + G+  DP  +G V     + L   PG  G    PG  G + DPG+ GL   P       
Sbjct: 1390 IPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPP---GFEG 1446

Query: 89   DPGVRGLVADPGVRG 103
             PG +G    PG+ G
Sbjct: 1447 APGQQGPFGMPGMPG 1461



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 40/146 (27%), Positives = 55/146 (37%), Gaps = 20/146 (13%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD- 89
           G   +P   GLV  P +       G +GL   PG+ G    PG+ G    P  +    D 
Sbjct: 694 GSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDI 753

Query: 90  -------PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR----------Q 132
                  PG +GL    G +G + D G+ GL       GL+     G R          Q
Sbjct: 754 FGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGP--KGERGSPGTPGQVGQ 811

Query: 133 GGSRRESGARCIRRPAGVTAAPETAG 158
            G+   SG   I+  +G+  AP   G
Sbjct: 812 PGTPGSSGPYGIKGKSGLPGAPGFPG 837



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 54   PGVRGLVAD---PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            PG+RG   D   PG++G    PG  G+    ++     DPG  GL  + G  G    PG 
Sbjct: 1222 PGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGP 1281

Query: 111  RG 112
             G
Sbjct: 1282 PG 1283



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           RGL   P        PG  G   +PG  GLV  P + G    P  R     PG  GL   
Sbjct: 681 RGLPGTP------GQPGSSGSKGEPGSPGLVHLPELPGF---PGPRGEKGLPGFPGLPGK 731

Query: 99  PGVRGLVADPGVRGLAAA 116
            G+ G++  PG+ G   A
Sbjct: 732 DGLPGMIGSPGLPGSKGA 749



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G    P  +G   D  +      PG  GL    G  G +  PG  G   DP        P
Sbjct: 1295 GFPGIPGPKGPKGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDP------GFP 1348

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAALMV 119
            G++G     G  GL  DPG    A A+ V
Sbjct: 1349 GMKGKAGPRGSSGLQGDPGQTPTAEAVQV 1377



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 11/72 (15%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVV-----RRLVADPGVRGLVADPGVRGLVADPG 109
           G  GL+  PG+      PG +G   DPV+     + +  DPG+ GL    G +G    PG
Sbjct: 140 GYPGLLGPPGL------PGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPG 193

Query: 110 VRGLAAALMVRG 121
             G A    ++G
Sbjct: 194 AVGPAGPPGLQG 205



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVR---GLVADPGVR 111
            G +G    PG  GL   PG+ G++    V      PG  G+   PG++   G+   PG+ 
Sbjct: 987  GDKGEAGRPGPPGLPGAPGLPGIIKG--VSGKPGPPGFMGIRGLPGLKGSSGITGFPGMP 1044

Query: 112  GLAAALMVRG 121
            G + +  +RG
Sbjct: 1045 GESGSQGIRG 1054



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P  +G   DPV+    A    +G+  DPG+ GL    G+ G    P     V   G  GL
Sbjct: 151 PGQKGSKGDPVL----APGSFKGMKGDPGLPGL---DGITGPQGAPGFPGAVGPAGPPGL 203

Query: 96  VADPGVRGLVADPGVRGL 113
              PG  G +   G  GL
Sbjct: 204 QGPPGPPGPLGPDGNMGL 221



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 54  PGVRGLVADPGVRGLVAD---PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           PG RGL  D G  GL      PG +G+    ++       G  G    PG +G    PG 
Sbjct: 627 PGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGT 686

Query: 111 RG 112
            G
Sbjct: 687 PG 688



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G     G  GL+ + G  G   +     +  D G+ G    PGV G+  +PG+ G
Sbjct: 1087 PGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPG 1145



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPG-----VRGLVADPGVRGLVADPVVR-RLVADPGV 92
            +G    P +  L   PG +G    PG     V G    PG +G    P +       PG+
Sbjct: 1165 KGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGL 1224

Query: 93   RGLVAD---PGVRGLVADPGVRGLAAALMVRG 121
            RG   D   PG++G    PG  G++   ++ G
Sbjct: 1225 RGQKGDRGFPGLQGPAGLPGAPGISLPSLIAG 1256



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            ++G    P   G+    ++     DPG  GL  + G  G    PG  G  ++   +    
Sbjct: 1236 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSN---QGDTG 1292

Query: 89   DPGVRGLVADPGVRGLVAD---PGVRGLAAALMVRGL 122
            DPG  G+   PG +G   D   PG  GL   L ++G+
Sbjct: 1293 DPGFPGI---PGPKGPKGDQGIPGFSGLPGELGLKGM 1326



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 55  GVRGLVADPGV---RGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
           G++G+  D G     G V + G  G    P    L+  PG++G   D G  G     G  
Sbjct: 471 GLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAP 530

Query: 112 GLAAAL---MVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
           GL   L     +G     ++   QG  G R +SG++  R   GV   P   G
Sbjct: 531 GLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFR---GVIGEPGKDG 579



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G    PG  G     G +G    P +  L   PG  G   + G+ G    PG  GL
Sbjct: 675 PGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGL 734

Query: 114 AAALMVRGL 122
              +   GL
Sbjct: 735 PGMIGSPGL 743



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVR-------RLVADPGVRGLVADPGVRGLVADPGV 74
            GM   S  +G+   P + G    P ++        +   PG +G   + G +G     G+
Sbjct: 1042 GMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGL 1101

Query: 75   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             G +  P  +      GV G V  PG  G     G+RG
Sbjct: 1102 IGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRG 1139



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/59 (32%), Positives = 24/59 (40%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G     G+ G    PG  G   +P    LV  P + G     G +GL   PG+ G
Sbjct: 672 PGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPG 730



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 15/131 (11%)

Query: 37   VVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV 96
            +++G+   P        PG  G+   PG++G     G  G+  +   + +   PG+ G  
Sbjct: 1009 IIKGVSGKP------GPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGAS 1062

Query: 97   ADPGVRG-------LVADPGVRGLAAALMVRGLVAA-ALMG-CRQGGSRRESGARCIRRP 147
              PG++G       +   PG +G       +G      L+G     G++ E G   +   
Sbjct: 1063 GLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGD 1122

Query: 148  AGVTAAPETAG 158
             G+  AP   G
Sbjct: 1123 VGLPGAPGFPG 1133



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 6/60 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G     G RGL   PG  G            +PG  GLV  P + G     G +GL
Sbjct: 669 PGTPGFPGPKGSRGLPGTPGQPGSSGSK------GEPGSPGLVHLPELPGFPGPRGEKGL 722



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G  G+    G+ G+   PG  G    P +       G  G     G  GL+  PG+ G
Sbjct: 93  DKGPMGVPGFLGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPG 152

Query: 113 LAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
              +     L   +  G +  G     G   I  P G    P   G
Sbjct: 153 QKGSKGDPVLAPGSFKGMK--GDPGLPGLDGITGPQGAPGFPGAVG 196



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGV------RGLVADPGVRGLVADPGVR 75
            G+   S++ G   DP   GL  +         PG       +G   DPG  G+    G +
Sbjct: 1247 GISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPK 1306

Query: 76   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G    P    L  + G++G+  +PG    +  PG  G
Sbjct: 1307 GDQGIPGFSGLPGELGLKGMRGEPG---FMGTPGKVG 1340


>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
           sapiens]
          Length = 1690

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG++GL  +PG+ GL   PG  G+   P +     + G  G V  PG+ GL   PG RGL
Sbjct: 862 PGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGL 921

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHG 165
                  G +  +     + G+  E G R    P G+  +P      LW  G
Sbjct: 922 KGIPGSTGKMGPS----GRAGTPGEKGDRGNPGPVGI-PSPRRPMSNLWLKG 968



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 25/69 (36%), Positives = 31/69 (44%)

Query: 45   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
            P    +   PG  GL    G+ GL  DPG +G V     + L   PG  G    PG  G 
Sbjct: 1369 PTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGA 1428

Query: 105  VADPGVRGL 113
            + DPG+ GL
Sbjct: 1429 LGDPGLPGL 1437



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 8/143 (5%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPG---VRGLVADPGVRGLVADPGVRGLV 78
           G V N+   G    P   GL+  P ++    D G    +G    PG+ G +   G +G  
Sbjct: 485 GGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKK 544

Query: 79  ADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRE 138
            +P++  +   PG RG     G RG++ +PG  G+     + G     L G    G   E
Sbjct: 545 GEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPG-----LPGDGGQGFPGE 599

Query: 139 SGARCIRRPAGVTAAPETAGHGL 161
            G   +    G    P   G+GL
Sbjct: 600 KGLPGLPGEKGHPGPPGLPGNGL 622



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 10/94 (10%)

Query: 27  SVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD-----PGVRGLVADP 81
           S ++GM  D   RG       R ++ +PG  G+   PG+ GL  D     PG +GL   P
Sbjct: 550 STIQGMPGD---RGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLP 606

Query: 82  VVRRLVADPGV--RGLVADPGVRGLVADPGVRGL 113
             +     PG+   GL   PG RGL  D G  GL
Sbjct: 607 GEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGL 640



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G   + V +G+   P ++GL  +P +  L   PG  G+   P + G   + G  G V  
Sbjct: 850 KGPPGSIVKKGL---PGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGF 906

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           P +  L   PG RGL   PG  G +   G  G
Sbjct: 907 PGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAG 938



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 19/152 (12%)

Query: 12   AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
            +G   +L ++GM       G +  P   G   DP        PG++G     G  GL  D
Sbjct: 1314 SGLPGELGLKGMRGEP---GFMGTPGKVGPPGDP------GFPGMKGKAGPRGSSGLQGD 1364

Query: 72   PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
            PG       P    +   PG  GL    G+ GL  DPG +G       +GL         
Sbjct: 1365 PG-----QTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGP 1419

Query: 132  QG-----GSRRESGARCIRRPAGVTAAPETAG 158
             G     G+  + G   ++ P G   AP   G
Sbjct: 1420 SGLPGPPGALGDPGLPGLQGPPGFEGAPGQQG 1451



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G+  N  + G+   P   G+   P +     + G  G V  PG+ GL   PG RGL  
Sbjct: 864  LKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKG 923

Query: 80   DPVVRRLVADPGVRGLVADPGVR---GLVADPGVRGLAAALMVRGLVAAALMGCRQG--G 134
             P     +   G  G   + G R   G V  P  R   + L ++G   +       G  G
Sbjct: 924  IPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPG 983

Query: 135  SRRESGARCIRRPAGVTAAPETAG 158
             R + G      P G+  AP   G
Sbjct: 984  PRGDKGEAGRPGPPGLPGAPGLPG 1007



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 12/80 (15%)

Query: 37  VVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV 96
           V+ G   DP V      PG+ GL  D G++GL    GV GL A      L   PG  G  
Sbjct: 355 VISGNPGDPGV------PGLPGLKGDEGIQGLRGPSGVPGLPA------LSGVPGALGPQ 402

Query: 97  ADPGVRGLVADPGVRGLAAA 116
             PG++G   +PG   + AA
Sbjct: 403 GFPGLKGDQGNPGRTTIGAA 422



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 23/64 (35%), Positives = 28/64 (43%)

Query: 50   LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
            L  DPG +G V   G +GL   PG  G    P     + DPG+ GL   PG  G     G
Sbjct: 1392 LTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPGQQG 1451

Query: 110  VRGL 113
              G+
Sbjct: 1452 PFGM 1455



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 38   VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
            + GL  DP  +  V   G +GL   PG  G    PG  G + DP +  L   PG  G   
Sbjct: 1389 IPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGA-- 1446

Query: 98   DPGVRGLVADPGVRG 112
             PG +G    PG+ G
Sbjct: 1447 -PGQQGPFGMPGMPG 1460



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 14/147 (9%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G++ N    G   +    G+  D  +      PGV G+  +PG+ G     G  G +  P
Sbjct: 1099 GLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSP 1158

Query: 82   VV---RRLVADPGVRGLVADPGVRG--------LVADPGVRGLAAALMVRGLVAAALMGC 130
             +   +     PG+ GL   PG +G        +   PG  GL      +G     +   
Sbjct: 1159 GLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAP 1218

Query: 131  RQGGSRRESGAR---CIRRPAGVTAAP 154
             + G R + G R    ++ PAG+  AP
Sbjct: 1219 GKPGLRGQKGDRGFPGLQGPAGLPGAP 1245



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           + G +G+   PG RG +   GV+G       +  +  PG+ G     G+ G   D G+ G
Sbjct: 288 EKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGF---QGIEGQKGDIGLPG 344

Query: 113 LAAALMVRGLVAAALMG----CRQGGSRRESGARCIRRPAGVTAAPETAG 158
               + + G V +   G        G + + G + +R P+GV   P  +G
Sbjct: 345 PDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSG 394



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 18/147 (12%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP-------- 81
           +G+   P  RG +    V+      G +G +  PG+ G     G +G +  P        
Sbjct: 292 KGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDI 351

Query: 82  ---VVRRLVADPGVRGLVA---DPGVRGLVADPGVRGLAAALMVRGLVA----AALMGCR 131
              V+     DPGV GL     D G++GL    GV GL A   V G +       L G +
Sbjct: 352 DGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQ 411

Query: 132 QGGSRRESGARCIRRPAGVTAAPETAG 158
               R   GA  +    G+   P   G
Sbjct: 412 GNPGRTTIGAAGLPGRDGLPGPPGPPG 438



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G+   PG +G     G  G +    +      PG++GL  +PG+ GL   PG  G+
Sbjct: 832 PGFPGISGHPGKKGTRGKKGPPGSIVKKGL------PGLKGLPGNPGLVGLKGSPGSPGV 885

Query: 114 AAALMVRG 121
           A    + G
Sbjct: 886 AGLPALSG 893



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            DPG  G+    G +G    PG  GL  +  ++ +  +PG  G    PG  G   DPG  G
Sbjct: 1292 DPGFPGIPGPKGPKGDQGIPGFSGLPGELGLKGMRGEPGFMGT---PGKVGPPGDPGFPG 1348

Query: 113  LAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            +      RG          QG   +   A  ++ P G    P   G
Sbjct: 1349 MKGKAGPRGSSGL------QGDPGQTPTAEAVQVPPGPLGLPGIDG 1388



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G   DP    +    G +G    PG  GL  + G++G+  +P     +  PG  G   D
Sbjct: 1287 QGDTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLKGMRGEP---GFMGTPGKVGPPGD 1343

Query: 99   PGVRGLVADPGVRG 112
            PG  G+    G RG
Sbjct: 1344 PGFPGMKGKAGPRG 1357



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            + G+  DP  +G V     + L   PG  G    PG  G + DPG+ GL   P       
Sbjct: 1389 IPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPP---GFEG 1445

Query: 89   DPGVRGLVADPGVRG 103
             PG +G    PG+ G
Sbjct: 1446 APGQQGPFGMPGMPG 1460



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 40/146 (27%), Positives = 55/146 (37%), Gaps = 20/146 (13%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD- 89
           G   +P   GLV  P +       G +GL   PG+ G    PG+ G    P  +    D 
Sbjct: 693 GSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDI 752

Query: 90  -------PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR----------Q 132
                  PG +GL    G +G + D G+ GL       GL+     G R          Q
Sbjct: 753 FGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGP--KGERGSPGTPGQVGQ 810

Query: 133 GGSRRESGARCIRRPAGVTAAPETAG 158
            G+   SG   I+  +G+  AP   G
Sbjct: 811 PGTPGSSGPYGIKGKSGLPGAPGFPG 836



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 54   PGVRGLVAD---PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            PG+RG   D   PG++G    PG  G+    ++     DPG  GL  + G  G    PG 
Sbjct: 1221 PGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGP 1280

Query: 111  RG 112
             G
Sbjct: 1281 PG 1282



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           RGL   P        PG  G   +PG  GLV  P + G    P  R     PG  GL   
Sbjct: 680 RGLPGTP------GQPGSSGSKGEPGSPGLVHLPELPGF---PGPRGEKGLPGFPGLPGK 730

Query: 99  PGVRGLVADPGVRGLAAA 116
            G+ G++  PG+ G   A
Sbjct: 731 DGLPGMIGSPGLPGSKGA 748



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G    P  +G   D  +      PG  GL    G  G +  PG  G   DP        P
Sbjct: 1294 GFPGIPGPKGPKGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDP------GFP 1347

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAALMV 119
            G++G     G  GL  DPG    A A+ V
Sbjct: 1348 GMKGKAGPRGSSGLQGDPGQTPTAEAVQV 1376



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 11/72 (15%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVV-----RRLVADPGVRGLVADPGVRGLVADPG 109
           G  GL+  PG+      PG +G   DPV+     + +  DPG+ GL    G +G    PG
Sbjct: 139 GYPGLLGPPGL------PGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPG 192

Query: 110 VRGLAAALMVRG 121
             G A    ++G
Sbjct: 193 AVGPAGPPGLQG 204



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVR---GLVADPGVR 111
            G +G    PG  GL   PG+ G++    V      PG  G+   PG++   G+   PG+ 
Sbjct: 986  GDKGEAGRPGPPGLPGAPGLPGIIKG--VSGKPGPPGFMGIRGLPGLKGSSGITGFPGMP 1043

Query: 112  GLAAALMVRG 121
            G + +  +RG
Sbjct: 1044 GESGSQGIRG 1053



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P  +G   DPV+    A    +G+  DPG+ GL    G+ G    P     V   G  GL
Sbjct: 150 PGQKGSKGDPVL----APGSFKGMKGDPGLPGL---DGITGPQGAPGFPGAVGPAGPPGL 202

Query: 96  VADPGVRGLVADPGVRGL 113
              PG  G +   G  GL
Sbjct: 203 QGPPGPPGPLGPDGNMGL 220



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 54  PGVRGLVADPGVRGLVAD---PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           PG RGL  D G  GL      PG +G+    ++       G  G    PG +G    PG 
Sbjct: 626 PGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGT 685

Query: 111 RG 112
            G
Sbjct: 686 PG 687



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G     G  GL+ + G  G   +     +  D G+ G    PGV G+  +PG+ G
Sbjct: 1086 PGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPG 1144



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPG-----VRGLVADPGVRGLVADPVVR-RLVADPGV 92
            +G    P +  L   PG +G    PG     V G    PG +G    P +       PG+
Sbjct: 1164 KGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGL 1223

Query: 93   RGLVAD---PGVRGLVADPGVRGLAAALMVRG 121
            RG   D   PG++G    PG  G++   ++ G
Sbjct: 1224 RGQKGDRGFPGLQGPAGLPGAPGISLPSLIAG 1255



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            ++G    P   G+    ++     DPG  GL  + G  G    PG  G  ++   +    
Sbjct: 1235 LQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSN---QGDTG 1291

Query: 89   DPGVRGLVADPGVRGLVAD---PGVRGLAAALMVRGL 122
            DPG  G+   PG +G   D   PG  GL   L ++G+
Sbjct: 1292 DPGFPGI---PGPKGPKGDQGIPGFSGLPGELGLKGM 1325



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 55  GVRGLVADPGV---RGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
           G++G+  D G     G V + G  G    P    L+  PG++G   D G  G     G  
Sbjct: 470 GLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAP 529

Query: 112 GLAAAL---MVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
           GL   L     +G     ++   QG  G R +SG++  R   GV   P   G
Sbjct: 530 GLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFR---GVIGEPGKDG 578



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G    PG  G     G +G    P +  L   PG  G   + G+ G    PG  GL
Sbjct: 674 PGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGL 733

Query: 114 AAALMVRGL 122
              +   GL
Sbjct: 734 PGMIGSPGL 742



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVR-------RLVADPGVRGLVADPGVRGLVADPGV 74
            GM   S  +G+   P + G    P ++        +   PG +G   + G +G     G+
Sbjct: 1041 GMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGL 1100

Query: 75   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             G +  P  +      GV G V  PG  G     G+RG
Sbjct: 1101 IGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRG 1138



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/59 (32%), Positives = 24/59 (40%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G     G+ G    PG  G   +P    LV  P + G     G +GL   PG+ G
Sbjct: 671 PGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPG 729



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 15/131 (11%)

Query: 37   VVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV 96
            +++G+   P        PG  G+   PG++G     G  G+  +   + +   PG+ G  
Sbjct: 1008 IIKGVSGKP------GPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGAS 1061

Query: 97   ADPGVRG-------LVADPGVRGLAAALMVRGLVAA-ALMG-CRQGGSRRESGARCIRRP 147
              PG++G       +   PG +G       +G      L+G     G++ E G   +   
Sbjct: 1062 GLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGD 1121

Query: 148  AGVTAAPETAG 158
             G+  AP   G
Sbjct: 1122 VGLPGAPGFPG 1132



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 6/60 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G     G RGL   PG  G            +PG  GLV  P + G     G +GL
Sbjct: 668 PGTPGFPGPKGSRGLPGTPGQPGSSGSK------GEPGSPGLVHLPELPGFPGPRGEKGL 721



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G  G+    G+ G+   PG  G    P +       G  G     G  GL+  PG+ G
Sbjct: 92  DKGPMGVPGFLGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPG 151

Query: 113 LAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
              +     L   +  G +  G     G   I  P G    P   G
Sbjct: 152 QKGSKGDPVLAPGSFKGMK--GDPGLPGLDGITGPQGAPGFPGAVG 195



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGV------RGLVADPGVRGLVADPGVR 75
            G+   S++ G   DP   GL  +         PG       +G   DPG  G+    G +
Sbjct: 1246 GISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPK 1305

Query: 76   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G    P    L  + G++G+  +PG    +  PG  G
Sbjct: 1306 GDQGIPGFSGLPGELGLKGMRGEPG---FMGTPGKVG 1339


>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
          Length = 1714

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 43/135 (31%), Positives = 57/135 (42%), Gaps = 9/135 (6%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVAD---PGVRGLVADPGVR--- 75
            G   N   RG    P ++GL      R L  +PG+RGL  D   PG  G+   PG     
Sbjct: 960  GKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGES 1019

Query: 76   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAA-ALMGCRQGG 134
            GL  +P  +  V   G  G   +PG+RG    PG  GL     ++G+     L G  + G
Sbjct: 1020 GLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPG--EDG 1077

Query: 135  SRRESGARCIRRPAG 149
             + E G   I  P G
Sbjct: 1078 EKGEMGLPGIIGPLG 1092



 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVAD---PVVRRLVADPGVRG---LVADPGVRGLVADPG 73
            ++G+  ++  RG+  +P +RGL  D   P    +   PG  G   L  +PG +G V   G
Sbjct: 976  LQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAG 1035

Query: 74   VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
              G   +P +R     PG  GL    G++G+   PG RGL
Sbjct: 1036 SVGGTGEPGLRGEPGAPGEEGLQGKDGLKGV---PGGRGL 1072



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/64 (34%), Positives = 34/64 (53%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L+ + G++G   + G +G     G+ G   +P  R     PG++GL    G RGL  +PG
Sbjct: 934 LLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPG 993

Query: 110 VRGL 113
           +RGL
Sbjct: 994 LRGL 997



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 24/73 (32%), Positives = 36/73 (49%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            GL+ +  ++    + G +G     G+ G   +PG RG    P ++ L    G RGL  +P
Sbjct: 933  GLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEP 992

Query: 100  GVRGLVADPGVRG 112
            G+RGL  D G  G
Sbjct: 993  GLRGLQGDVGPPG 1005



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 13/121 (10%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G   +P   GL  +      V D G  G + + G  GL  + G+ G + +   R     
Sbjct: 827 KGYAGEPGPEGLKGE------VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGER---GS 877

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
           PG  G   + GV G    PGV G    L + G V A        GS+   G R  R P G
Sbjct: 878 PGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGAR----GPPGSQGPKGQRGSRGPDG 933

Query: 150 V 150
           +
Sbjct: 934 L 934



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G +  P  +GL   P +R      G+ G    PGV+G    PG  G+      + L   P
Sbjct: 1306 GKIGPPGKQGL---PGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQP 1362

Query: 91   GV---RGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            G+   RG     G +G   DPG++G      V+GL
Sbjct: 1363 GIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGL 1397



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 36/139 (25%), Positives = 47/139 (33%), Gaps = 13/139 (9%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           +RG V      G    P   GL  +  +  +  D G +G   + G  G   D G  GL  
Sbjct: 682 LRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPG 741

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
            P +R      G  G   DPG++G    PG  G    + + G          Q G     
Sbjct: 742 PPGMR---GKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPG----------QNGPEGPK 788

Query: 140 GARCIRRPAGVTAAPETAG 158
           G    R P G      T G
Sbjct: 789 GLLGNRGPPGPPGLKGTQG 807



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 37/141 (26%), Positives = 50/141 (35%), Gaps = 16/141 (11%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD------PGVRGLVADPVVR 84
            G+  +P  +G V          +PG+RG    PG  GL         PG RGL  +   +
Sbjct: 1020 GLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEK 1079

Query: 85   RLVADPGV------RGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRE 138
              +  PG+       G    PG  G+V  PG RG       +G +        + GSR  
Sbjct: 1080 GEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPT----GEVGSRGP 1135

Query: 139  SGARCIRRPAGVTAAPETAGH 159
             G      P G        GH
Sbjct: 1136 PGKIGKSGPKGARGTRGAVGH 1156



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 9/113 (7%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGL------VADPGVR 75
           G+  N  + G+  D   +G   +        D G  GL   PG+RG         DPG++
Sbjct: 702 GLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQ 761

Query: 76  GLVADPVVRRLVADPGVRGLVADPGVRGLVAD---PGVRGLAAALMVRGLVAA 125
           G    P       D G+ G     G +GL+ +   PG  GL       G + A
Sbjct: 762 GPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGA 814



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 6/101 (5%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG--- 76
            +RG    + + G    P V+G    P    +    G +GL   PG++G     G +G   
Sbjct: 1319 IRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQG 1378

Query: 77   LVADPVVRRLVADPGVRGLV---ADPGVRGLVADPGVRGLA 114
               DP ++    + GV+GL      PG +G   D G+ G++
Sbjct: 1379 PCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGIS 1419



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 22/68 (32%), Positives = 29/68 (42%)

Query: 45  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
           P +R  V   G  G    PG  GL  + G+ G+  D   +    + G  G   D G  GL
Sbjct: 680 PGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGL 739

Query: 105 VADPGVRG 112
              PG+RG
Sbjct: 740 PGPPGMRG 747



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/68 (32%), Positives = 29/68 (42%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG+RG V   G  G    PG  GL  +  +  +  D G +G   + G  G   D G  GL
Sbjct: 680 PGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGL 739

Query: 114 AAALMVRG 121
                +RG
Sbjct: 740 PGPPGMRG 747



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 15/76 (19%)

Query: 54  PGVRGLVADPG------VRGLVADPGVRGLVADPVV---RRLVADPGVRGLVADPGVRGL 104
           PG +G   DPG      V G   D G+ GL+  P +   + L   PG+ GL  + G+ G 
Sbjct: 530 PGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGF 589

Query: 105 VAD------PGVRGLA 114
             +      PG +GLA
Sbjct: 590 AGNIGSPGYPGRQGLA 605



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G   +PG  GL  + G +G +        + + G  GL  + G+ G + + G RG 
Sbjct: 824 PGQKGYAGEPGPEGLKGEVGDQGNIGK------IGETGPVGLPGEVGMTGSIGEKGERGS 877

Query: 114 AAALMVRG 121
              L  +G
Sbjct: 878 PGPLGPQG 885



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 28/149 (18%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVV---RRLVADPGVRGLVADPGVRGLVADPGVRGLV 78
           G      V G   D  + GL+  P +   + L   PG+ GL   PG +G+   PG  G +
Sbjct: 540 GFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGL---PGEQGI---PGFAGNI 593

Query: 79  ADPVV--RRLVADP-------GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMG 129
             P    R+ +A P       G +G +  PG  G +   G RG+      +G        
Sbjct: 594 GSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKG----- 648

Query: 130 CRQGGSRRESGARCIRRPAGVTAAPETAG 158
            RQG      G    R PAG+  +P   G
Sbjct: 649 -RQG----FPGDFGDRGPAGLDGSPGLVG 672



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 6/109 (5%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G+  D+ + G       +G++ +   RG    P ++    + G  G   + G RG    P
Sbjct: 771 GFPGDIGIPGQNGPEGPKGLLGN---RGPPGPPGLKGTQGEEGPIGAFGELGPRG---KP 824

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
           G +G   +P    L  + G +G +   G  G V  PG  G+  ++  +G
Sbjct: 825 GQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKG 873



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 10/123 (8%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRG---LVADPGVRGLVADPVVRRL 86
            +G    P   G    P ++ L+   G++G     G+ G    +  PG +GL   P +R  
Sbjct: 1266 KGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGL---PGIRGG 1322

Query: 87   VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
                G+ G    PGV+G    PG  G+      +GL     +     G R   GA+  + 
Sbjct: 1323 PGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGI----QGKRGHRGAQGDQG 1378

Query: 147  PAG 149
            P G
Sbjct: 1379 PCG 1381



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADP------VVRRLVADPGVRGLVADPGV---RGLV 105
           G RG+    G  GL   PG +G   DP       V     D G+ GL+  PG+   +GL 
Sbjct: 513 GPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLK 572

Query: 106 ADPGVRGL 113
             PG+ GL
Sbjct: 573 GHPGLPGL 580



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           +G +  P     +   G RG+   PG+RG     G +G   D        D G  GL   
Sbjct: 617 QGFIGSPGEAGQLGPEGERGI---PGIRGKKGFKGRQGFPGD------FGDRGPAGLDGS 667

Query: 99  PGVRGLVADPGVRGLAAALMVRGLVAAA 126
           PG+ G    PG  GL  ++   G +  A
Sbjct: 668 PGLVGGTGPPGFPGLRGSVGPVGPIGPA 695



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 16/156 (10%)

Query: 15   GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
            G D  V G        G V D   RG       +  V  PG+RG     G  G   D G 
Sbjct: 1194 GEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGE 1253

Query: 75   RGLVAD------------PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            +GL  +            P        PG++GL+   G++G     G+ G    +   G 
Sbjct: 1254 QGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPG- 1312

Query: 123  VAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                L G R G  R  +G      P GV  +    G
Sbjct: 1313 -KQGLPGIRGGPGR--TGLAGAPGPPGVKGSSGLPG 1345



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 35/113 (30%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L   PG+ G    PG       PG+RG V           PG  GL  + G+ G+  D G
Sbjct: 664 LDGSPGLVGGTGPPGF------PGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKG 717

Query: 110 VRGLAAALMVRGLV----AAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            +G A  L   G      A  L G    G R +SG      P+G T  P   G
Sbjct: 718 EQGTAGELGEPGYPGDKGAVGLPG--PPGMRGKSG------PSGQTGDPGLQG 762



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 13/106 (12%)

Query: 21   RGMVANSVVRGMVADPVV---RGLVADPVVRRLVADPGVRG-------LVADPGVRGL-- 68
            RG V +  + G   +P +   RG    P    L    G +G       ++  PG RG   
Sbjct: 1151 RGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPG 1210

Query: 69   -VADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
             V D G RG       +  V  PG+RG     G  G   D G +GL
Sbjct: 1211 PVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGL 1256



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPG------VRGLVADPGVRGLVADP 108
           G+ G     G RG+    G  GL   P  +    DPG      V G   D G+ GL+  P
Sbjct: 504 GIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPP 563

Query: 109 GVRG 112
           G++G
Sbjct: 564 GMQG 567



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVAD------PGVRGLVADPGVRGLVADPVVR 84
            G+   P  RGL  +   +  +  PG+ G +        PG  G+V  PG RG       +
Sbjct: 1062 GLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDK 1121

Query: 85   RLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV 123
              +   G  G    PG  G     G RG   A+   GL+
Sbjct: 1122 GQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLM 1160



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/68 (26%), Positives = 29/68 (42%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G RG     G +G     G  GL+ +  ++    + G +G     G+ G   +PG RG  
Sbjct: 912 GARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQ 971

Query: 115 AALMVRGL 122
               ++GL
Sbjct: 972 GKPGLQGL 979



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 24/125 (19%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGV---------------- 65
           GM  +   +G    P   G   +  V      PGV G +   G+                
Sbjct: 864 GMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPK 923

Query: 66  --------RGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAAL 117
                    GL+ + G++G   +   +      G+ G   +PG RG    PG++GL  + 
Sbjct: 924 GQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGST 983

Query: 118 MVRGL 122
             RGL
Sbjct: 984 GDRGL 988


>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
            sapiens]
          Length = 1691

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG+ G   +PG++G V DPG+ GL   P  +     PG  G    PG +G+   PG  G
Sbjct: 1084 EPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG 1143

Query: 113  LAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAGHG 160
            L       G V       + G  G + + G   I  PAG    P   G G
Sbjct: 1144 LPGE---PGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFG 1190



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 6    KSVLWGAGWGSDLVVRGMVANSVVRGMVADPVV---RGLVADPVVRRLVADPGVRGLVAD 62
            K  +   G+     V G    S V G    P +   +G   DP +   +  PG+ G   +
Sbjct: 1026 KGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISS-IGLPGLPGPKGE 1084

Query: 63   PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            PG+ G   +PG++G V DP +  L   PG +G    PG  G    PG +G++
Sbjct: 1085 PGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 26/77 (33%), Positives = 37/77 (48%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G   +P +     +PG++G V DPG+ GL   PG +G    P        PG +G+
Sbjct: 1076 PGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGI 1135

Query: 96   VADPGVRGLVADPGVRG 112
               PG  GL  +PG  G
Sbjct: 1136 SGPPGNPGLPGEPGPVG 1152



 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  N  ++G   +P   GL   P ++     PG++G    PG+ G+  DPG+ G+   P
Sbjct: 1279 GLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFP 1338

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA-ALMVRG 121
             ++     PG  G   +PG+ G    PG+ G +  +++++G
Sbjct: 1339 GMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKG 1379



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 27/82 (32%), Positives = 37/82 (45%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G   +P + G   +P ++  V DPG+ GL   PG +G    PG  G    P  + +   P
Sbjct: 1080 GPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPP 1139

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  GL  +PG  G    PG  G
Sbjct: 1140 GNPGLPGEPGPVGGGGHPGQPG 1161



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 17/99 (17%)

Query: 40   GLVADPVVRRLVAD---PGVRGLVADPGVRGLVADPGVRGL------VADPVVRRL---- 86
            GL+  P ++  + D   PG +G+   PG  G+   PG  GL        DP +  +    
Sbjct: 1018 GLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPG 1077

Query: 87   ----VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
                  +PG+ G   +PG++G V DPG+ GL      +G
Sbjct: 1078 LPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD---PVVRRL 86
            +G+  DP   GL   P    L   PG +G    PG  GL+  PG++G + D   P  + +
Sbjct: 984  QGLPGDPGQPGLSGQP---GLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGV 1040

Query: 87   VADPGVRGLVADPGVRGLVADPGVRG 112
               PG  G+   PG  GL    G +G
Sbjct: 1041 EGPPGPSGVPGQPGSPGLPGQKGDKG 1066



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G   N  ++G V DP + GL   P  +     PG  G    PG +G+   PG  GL  +P
Sbjct: 1089 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEP 1148

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
                 V   G  G    PG +G     G+ G A
Sbjct: 1149 ---GPVGGGGHPGQPGPPGEKGKPGQDGIPGPA 1178



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 15   GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
            G  ++++G   ++   G+   P ++GL      + L   PG  G   DPG  GL    G 
Sbjct: 1372 GQSIIIKG---DAGPPGIPGQPGLKGLPGPQGPQGL---PGPTGPPGDPGRNGLPGFDGA 1425

Query: 75   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA 115
             G   DP    L   PG RGL   PG  GL   PG  G ++
Sbjct: 1426 GGRKGDP---GLPGQPGTRGLDGPPGPDGLQGPPGPPGTSS 1463



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G+      + L  DPG  GL   PG+ G    PG +G    P    L+  PG++G 
Sbjct: 972  PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPG---PPGPKGNPGLPGQPGLIGPPGLKGT 1028

Query: 96   VAD---PGVRGLVADPGVRGL 113
            + D   PG +G+   PG  G+
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGV 1049



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG---LVADPVVRRL 86
           RG    P   GL   P        PG+ G+  +PG   + + PG +G       P ++ L
Sbjct: 131 RGFPGSPGFPGLQGPP------GPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGL 184

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
               G+ G +  PG  GL+  PG  GL              MG    G + E G + ++ 
Sbjct: 185 PGPTGIPGPIGPPGPPGLMGPPGPPGLPG--------PKGNMGLNFQGPKGEKGEQGLQG 236

Query: 147 PAG 149
           P G
Sbjct: 237 PPG 239



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            G  GL  + G++G   +PG  GL   P ++     PG++G    PG+ G+  DPG+ G+
Sbjct: 1276 GPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGV 1334



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G   N    G+   P ++G    P ++     PG+ G+  DPG+ G+   PG++G   
Sbjct: 1286 IKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSG 1345

Query: 80   DPVVRRLVADPGVRGLVADPGVRG-------LVADPGVRGLAAALMVRGL 122
             P       +PG+ G    PG+ G       +  D G  G+     ++GL
Sbjct: 1346 VPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGL 1395



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRR---LV 87
           G V +  ++G+  +P        PG+ G   DPG    +  PG  GL  +P       L 
Sbjct: 629 GPVGEKGIQGVAGNP------GQPGIPGPKGDPGQT--ITQPGKPGLPGNPGRDGDVGLP 680

Query: 88  ADPGVRGLVADPGVRGLVADPGVRGL 113
            DPG+ G    PG+ G   +PG+ G+
Sbjct: 681 GDPGLPGQPGLPGIPGSKGEPGIPGI 706



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 44   DPVVRRLVADPGVRGLVADPGV------RGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
            DP +     + G  GL   PGV      +GL  DPG  GL   P    L   PG +G   
Sbjct: 956  DPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQP---GLPGPPGPKGNPG 1012

Query: 98   DPGVRGLVADPGVRG 112
             PG  GL+  PG++G
Sbjct: 1013 LPGQPGLIGPPGLKG 1027



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           ++ PG  GL   PG  GL   PG  G    P     + +PG  G    PG +GL  + GV
Sbjct: 416 ISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDE--ICEPGPPGPPGSPGDKGLQGEQGV 473

Query: 111 RG 112
           +G
Sbjct: 474 KG 475



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL-------VADPGVRGLVADPGVRG 103
           + +PG  G    PG +GL  + GV+G   D     +          PG+ GL   PG  G
Sbjct: 450 ICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLG 509

Query: 104 LVADPGVRGLAAALMVRGL 122
                G +G A A   +GL
Sbjct: 510 FPGQKGEKGQAGATGPKGL 528



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRG-LVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           V + G++G+  +PG  G+    G  G  +  P    L  +PG  G V  PG  GL   PG
Sbjct: 631 VGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG 690

Query: 110 VRGLAAALMVRGLVAAALMG 129
           + G+  +    G+    L G
Sbjct: 691 LPGIPGSKGEPGIPGIGLPG 710



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 2/109 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G +GL    G  GL  + G++G   +P    L   PG++G    PG++G    PG+ G+ 
Sbjct: 1267 GFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMK 1326

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAGHGL 161
                + G+     M    G  GS    G   +  P G    P  +G  +
Sbjct: 1327 GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSI 1375



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVAD-----PVVRRLVADPGVRGLVADPGVRGLVADPG 109
           GV+G    PG+ G +  PG+ G+  +     P    +   PG RG    PG  G +  PG
Sbjct: 819 GVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPG 878

Query: 110 VRGL 113
             GL
Sbjct: 879 SPGL 882



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 54  PGVRGLVADPGVRGLVADP----GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           PG RG    PG+RG    P    G +G   +P  R     PG  G    PG+ GL  DPG
Sbjct: 263 PGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKR---GKPGKDGENGQPGIPGLPGDPG 319

Query: 110 VRG 112
             G
Sbjct: 320 YPG 322



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVR--GLVADPVVRRLVADPGVRGLVADPGVRGLVAD 107
           L  DPG+ G    PG+ G   +PG+   GL   P  +     PG  G    PG  GL   
Sbjct: 679 LPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP 738

Query: 108 PGVRG 112
           PG  G
Sbjct: 739 PGPPG 743



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG+ G    PG  G    PG RG   D     +   PG +G+   PG+ G    PG+ G+
Sbjct: 53  PGLEGHPGLPGFPGPEGPPGPRGQKGDD---GIPGPPGPKGIRGPPGLPGFPGTPGLPGM 109



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 29  VRGMVADPVVRGLVADP---VVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRR 85
           ++G    P + G+  +P   ++  L    G  G    PG++GL    G+ G +  P    
Sbjct: 142 LQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPG 201

Query: 86  LVADPGVRGLVADPGVRGL 104
           L+  PG  GL    G  GL
Sbjct: 202 LMGPPGPPGLPGPKGNMGL 220



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRG--LVADPGVRGLVADPVVRRLVADPGVRGLVA 97
           GL  DP +      PG+ G   +PG+ G  L   PG +G    P        PG  GL  
Sbjct: 678 GLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEG 737

Query: 98  DPGVRGLVADPGVRGLA 114
            PG  G     G  G A
Sbjct: 738 PPGPPGFPGPKGEPGFA 754



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 40/139 (28%), Positives = 50/139 (35%), Gaps = 18/139 (12%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P +RG    P       + G +G   +PG RG    PG  G    P +  L  D
Sbjct: 266 RGPPGPPGIRGPPGPPG-----GEKGEKGEQGEPGKRG---KPGKDGENGQPGIPGLPGD 317

Query: 90  PGVRGLVADPGVRGLVAD---PGVRGLAAALMVRGLVAA-----ALMGCRQGGSRRESGA 141
           PG  G     G +G   D   PG  GL       G+         L G    G + E G 
Sbjct: 318 PGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGL--PGEKGERGF 375

Query: 142 RCIRRPAGVTAAPETAGHG 160
             I+ P G+   P  A  G
Sbjct: 376 PGIQGPPGLPGPPGAAVMG 394



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 19/74 (25%), Positives = 30/74 (40%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
           G+   P  + +   PG+ G    PG+ G+    G  G    P       + G  G    P
Sbjct: 81  GIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFP 140

Query: 100 GVRGLVADPGVRGL 113
           G++G    PG+ G+
Sbjct: 141 GLQGPPGPPGIPGM 154



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 54  PGVRGLVADPGVRGLVADPG----VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           PG+ G    PG  G   +PG      G+  D         PG+ GL   PG  GL   PG
Sbjct: 529 PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG 588

Query: 110 VRGLAAALMVRG 121
            +G    +  +G
Sbjct: 589 PKGEPGGITFKG 600



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVAD-----PVVRRLVADPGVRGLVADPGVRGLVADPGV 74
           V+G      + G +  P + G+  +     P    +   PG RG    PG  G +  PG 
Sbjct: 820 VQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGS 879

Query: 75  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            GL             G  G++  PG  G +  PG  G+
Sbjct: 880 PGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV 918



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG  GL   PG+ G   D G+ G+  +P +     +PG  G    PGV+G    PG  G
Sbjct: 1191 NPGPPGL---PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF---PGVQGPPGPPGSPG 1244

Query: 113  LA 114
             A
Sbjct: 1245 PA 1246



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG RG   D G+ G    PG +G+   P +      PG+ G+    G  G    PG  G
Sbjct: 71  PGPRGQKGDDGIPG---PPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNG 126



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 45   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG---LVADPVVRRLVADPGVRGLVADPGV 101
            P +     +PG +G    PG  G    PG  G   L  +  ++    +PG  GL   PG+
Sbjct: 1245 PALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGL 1304

Query: 102  RGLVADPGVRG 112
            +G    PG++G
Sbjct: 1305 KGDQGPPGLQG 1315



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 18/58 (31%), Positives = 23/58 (39%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G+ G    PG+ GL   PG  G       +      G +GL   PG  G    PG +G
Sbjct: 488 GISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKG 545



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G+   P   GL   P         G+ G     G RG    PG  GL   P        P
Sbjct: 96  GLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPP------GPP 149

Query: 91  GVRGLVADPGVRGLVADPGVRG 112
           G+ G+  +PG   + + PG +G
Sbjct: 150 GIPGMKGEPGSIIMSSLPGPKG 171



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD----PG 109
           PG+ GL   PG  G     G +G       + L   PG  G    PG +G   D    PG
Sbjct: 496 PGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPG 555

Query: 110 VRG 112
           ++G
Sbjct: 556 MKG 558



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G+   S V G+  D    GL   P +     + G +G    PG  G + DP + G   + 
Sbjct: 911 GIPGRSGVPGLKGDD---GLQGQPGLPGPTGEKGSKGEPGLPGPPGPM-DPNLLGSKGEK 966

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
               L   PG+ G+    G +GL  DPG  GL+
Sbjct: 967 GEPGL---PGIPGVSGPKGYQGLPGDPGQPGLS 996



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 6/96 (6%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLV---ADPVVRRL 86
           RG   D  + G      +R     PG  G    PG+ G    PG +G+         R  
Sbjct: 74  RGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGF 133

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              PG  GL   PG  G+   PG++G   ++++  L
Sbjct: 134 PGSPGFPGLQGPPGPPGI---PGMKGEPGSIIMSSL 166



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 31/130 (23%), Positives = 44/130 (33%), Gaps = 1/130 (0%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P   G +  P    L    G  G     G  G++  PG  G +  P    +   
Sbjct: 862 RGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGL 921

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR-QGGSRRESGARCIRRPA 148
            G  GL   PG+ G   + G +G        G +   L+G + + G     G   +  P 
Sbjct: 922 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPK 981

Query: 149 GVTAAPETAG 158
           G    P   G
Sbjct: 982 GYQGLPGDPG 991



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLV--- 87
           G    P  RG   D  +       G+RG    PG  G    PG+ G    P  + +    
Sbjct: 66  GPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCN 125

Query: 88  ADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIR 145
              G RG    PG  GL   PG  G+     ++G   + +M    G  G+    G   I+
Sbjct: 126 GTKGERGFPGSPGFPGLQGPPGPPGIPG---MKGEPGSIIMSSLPGPKGNPGYPGPPGIQ 182

Query: 146 RPAGVTAAPETAG 158
              G T  P   G
Sbjct: 183 GLPGPTGIPGPIG 195



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 2/101 (1%)

Query: 15  GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
           G  L   GM  +    G    P + GL   P    L   PG +G       +G    PG 
Sbjct: 548 GDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGN 607

Query: 75  RGLVADPVVRRLVADPGV--RGLVADPGVRGLVADPGVRGL 113
            GL   P     +  PG    G V + G++G+  +PG  G+
Sbjct: 608 PGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGI 648



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVA-----DPVVRRLVADPGVRGLVADPGVRGLVAD 107
           D G  G    PG  GL   PG +G V       P+    +   GV+G    PG+ G +  
Sbjct: 776 DRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQ 835

Query: 108 PGVRGL 113
           PG+ G+
Sbjct: 836 PGLHGI 841



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA-----DPVVRRLVADP 90
            P + G   D  +  +  +PG+ G   +PG  G    PGV+G         P +     +P
Sbjct: 1198 PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF---PGVQGPPGPPGSPGPALEGPKGNP 1254

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G +G    PG  G    PG  G
Sbjct: 1255 GPQGPPGRPGPTGFQGLPGPEG 1276



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G +   G RG    PG  G         L   PG +G V   G  G +  PG+ G+
Sbjct: 765 PGFKGALGPKGDRGFPGPPGPPGRTG------LDGLPGPKGDVGPNGQPGPMGPPGLPGI 818



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P   G    P  R    D G+ G     G+RG    PG  G    P +      PG +G+
Sbjct: 62  PGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGI 121

Query: 96  V---ADPGVRGLVADPGVRGL 113
                  G RG    PG  GL
Sbjct: 122 PGCNGTKGERGFPGSPGFPGL 142



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            P + G   +PG +G    PG  G    P         G  GL  + G++G   +PG  GL
Sbjct: 1245 PALEGPKGNPGPQGPPGRPGPTGFQGLP------GPEGPPGLPGNGGIKGEKGNPGQPGL 1298

Query: 114  AAALMVRG 121
                 ++G
Sbjct: 1299 PGLPGLKG 1306


>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
            sapiens]
          Length = 1685

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG+ G   +PG++G V DPG+ GL   P  +     PG  G    PG +G+   PG  G
Sbjct: 1084 EPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG 1143

Query: 113  LAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAGHG 160
            L       G V       + G  G + + G   I  PAG    P   G G
Sbjct: 1144 LPGE---PGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFG 1190



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 6    KSVLWGAGWGSDLVVRGMVANSVVRGMVADPVV---RGLVADPVVRRLVADPGVRGLVAD 62
            K  +   G+     V G    S V G    P +   +G   DP +   +  PG+ G   +
Sbjct: 1026 KGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISS-IGLPGLPGPKGE 1084

Query: 63   PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            PG+ G   +PG++G V DP +  L   PG +G    PG  G    PG +G++
Sbjct: 1085 PGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 26/77 (33%), Positives = 37/77 (48%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G   +P +     +PG++G V DPG+ GL   PG +G    P        PG +G+
Sbjct: 1076 PGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGI 1135

Query: 96   VADPGVRGLVADPGVRG 112
               PG  GL  +PG  G
Sbjct: 1136 SGPPGNPGLPGEPGPVG 1152



 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  N  ++G   +P   GL   P ++     PG++G    PG+ G+  DPG+ G+   P
Sbjct: 1273 GLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFP 1332

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA-ALMVRG 121
             ++     PG  G   +PG+ G    PG+ G +  +++++G
Sbjct: 1333 GMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKG 1373



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 27/82 (32%), Positives = 37/82 (45%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G   +P + G   +P ++  V DPG+ GL   PG +G    PG  G    P  + +   P
Sbjct: 1080 GPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPP 1139

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  GL  +PG  G    PG  G
Sbjct: 1140 GNPGLPGEPGPVGGGGHPGQPG 1161



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 17/99 (17%)

Query: 40   GLVADPVVRRLVAD---PGVRGLVADPGVRGLVADPGVRGL------VADPVVRRL---- 86
            GL+  P ++  + D   PG +G+   PG  G+   PG  GL        DP +  +    
Sbjct: 1018 GLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPG 1077

Query: 87   ----VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
                  +PG+ G   +PG++G V DPG+ GL      +G
Sbjct: 1078 LPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD---PVVRRL 86
            +G+  DP   GL   P    L   PG +G    PG  GL+  PG++G + D   P  + +
Sbjct: 984  QGLPGDPGQPGLSGQP---GLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGV 1040

Query: 87   VADPGVRGLVADPGVRGLVADPGVRG 112
               PG  G+   PG  GL    G +G
Sbjct: 1041 EGPPGPSGVPGQPGSPGLPGQKGDKG 1066



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G   N  ++G V DP + GL   P  +     PG  G    PG +G+   PG  GL  +P
Sbjct: 1089 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEP 1148

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
                 V   G  G    PG +G     G+ G A
Sbjct: 1149 ---GPVGGGGHPGQPGPPGEKGKPGQDGIPGPA 1178



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 15   GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
            G  ++++G   ++   G+   P ++GL      + L   PG  G   DPG  GL    G 
Sbjct: 1366 GQSIIIKG---DAGPPGIPGQPGLKGLPGPQGPQGL---PGPTGPPGDPGRNGLPGFDGA 1419

Query: 75   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA 115
             G   DP    L   PG RGL   PG  GL   PG  G ++
Sbjct: 1420 GGRKGDP---GLPGQPGTRGLDGPPGPDGLQGPPGPPGTSS 1457



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G+      + L  DPG  GL   PG+ G    PG +G    P    L+  PG++G 
Sbjct: 972  PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPG---PPGPKGNPGLPGQPGLIGPPGLKGT 1028

Query: 96   VAD---PGVRGLVADPGVRGL 113
            + D   PG +G+   PG  G+
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGV 1049



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG---LVADPVVRRL 86
           RG    P   GL   P        PG+ G+  +PG   + + PG +G       P ++ L
Sbjct: 131 RGFPGSPGFPGLQGPP------GPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGL 184

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
               G+ G +  PG  GL+  PG  GL              MG    G + E G + ++ 
Sbjct: 185 PGPTGIPGPIGPPGPPGLMGPPGPPGLPG--------PKGNMGLNFQGPKGEKGEQGLQG 236

Query: 147 PAG 149
           P G
Sbjct: 237 PPG 239



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            G  GL  + G++G   +PG  GL   P ++     PG++G    PG+ G+  DPG+ G+
Sbjct: 1270 GPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGV 1328



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G   N    G+   P ++G    P ++     PG+ G+  DPG+ G+   PG++G   
Sbjct: 1280 IKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSG 1339

Query: 80   DPVVRRLVADPGVRGLVADPGVRG-------LVADPGVRGLAAALMVRGL 122
             P       +PG+ G    PG+ G       +  D G  G+     ++GL
Sbjct: 1340 VPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGL 1389



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRR---LV 87
           G V +  ++G+  +P        PG+ G   DPG    +  PG  GL  +P       L 
Sbjct: 629 GPVGEKGIQGVAGNP------GQPGIPGPKGDPGQT--ITQPGKPGLPGNPGRDGDVGLP 680

Query: 88  ADPGVRGLVADPGVRGLVADPGVRGL 113
            DPG+ G    PG+ G   +PG+ G+
Sbjct: 681 GDPGLPGQPGLPGIPGSKGEPGIPGI 706



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 44   DPVVRRLVADPGVRGLVADPGV------RGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
            DP +     + G  GL   PGV      +GL  DPG  GL   P    L   PG +G   
Sbjct: 956  DPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQP---GLPGPPGPKGNPG 1012

Query: 98   DPGVRGLVADPGVRG 112
             PG  GL+  PG++G
Sbjct: 1013 LPGQPGLIGPPGLKG 1027



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           ++ PG  GL   PG  GL   PG  G    P     + +PG  G    PG +GL  + GV
Sbjct: 416 ISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDE--ICEPGPPGPPGSPGDKGLQGEQGV 473

Query: 111 RG 112
           +G
Sbjct: 474 KG 475



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 2/110 (1%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  GL    G  GL  + G++G   +P    L   PG++G    PG++G    PG+ G+
Sbjct: 1260 PGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGM 1319

Query: 114  AAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAGHGL 161
                 + G+     M    G  GS    G   +  P G    P  +G  +
Sbjct: 1320 KGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSI 1369



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL-------VADPGVRGLVADPGVRG 103
           + +PG  G    PG +GL  + GV+G   D     +          PG+ GL   PG  G
Sbjct: 450 ICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLG 509

Query: 104 LVADPGVRGLAAALMVRGL 122
                G +G A A   +GL
Sbjct: 510 FPGQKGEKGQAGATGPKGL 528



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRG-LVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           V + G++G+  +PG  G+    G  G  +  P    L  +PG  G V  PG  GL   PG
Sbjct: 631 VGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG 690

Query: 110 VRGLAAALMVRGLVAAALMG 129
           + G+  +    G+    L G
Sbjct: 691 LPGIPGSKGEPGIPGIGLPG 710



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVAD-----PVVRRLVADPGVRGLVADPGVRGLVADPG 109
           GV+G    PG+ G +  PG+ G+  +     P    +   PG RG    PG  G +  PG
Sbjct: 819 GVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPG 878

Query: 110 VRGL 113
             GL
Sbjct: 879 SPGL 882



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 54  PGVRGLVADPGVRGLVADP----GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           PG RG    PG+RG    P    G +G   +P  R     PG  G    PG+ GL  DPG
Sbjct: 263 PGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKR---GKPGKDGENGQPGIPGLPGDPG 319

Query: 110 VRG 112
             G
Sbjct: 320 YPG 322



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVR--GLVADPVVRRLVADPGVRGLVADPGVRGLVAD 107
           L  DPG+ G    PG+ G   +PG+   GL   P  +     PG  G    PG  GL   
Sbjct: 679 LPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP 738

Query: 108 PGVRG 112
           PG  G
Sbjct: 739 PGPPG 743



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG+ G    PG  G    PG RG   D     +   PG +G+   PG+ G    PG+ G+
Sbjct: 53  PGLEGHPGLPGFPGPEGPPGPRGQKGDD---GIPGPPGPKGIRGPPGLPGFPGTPGLPGM 109



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 29  VRGMVADPVVRGLVADP---VVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRR 85
           ++G    P + G+  +P   ++  L    G  G    PG++GL    G+ G +  P    
Sbjct: 142 LQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPG 201

Query: 86  LVADPGVRGLVADPGVRGL 104
           L+  PG  GL    G  GL
Sbjct: 202 LMGPPGPPGLPGPKGNMGL 220



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRG--LVADPGVRGLVADPVVRRLVADPGVRGLVA 97
           GL  DP +      PG+ G   +PG+ G  L   PG +G    P        PG  GL  
Sbjct: 678 GLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEG 737

Query: 98  DPGVRGLVADPGVRGLA 114
            PG  G     G  G A
Sbjct: 738 PPGPPGFPGPKGEPGFA 754



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 40/139 (28%), Positives = 50/139 (35%), Gaps = 18/139 (12%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P +RG    P       + G +G   +PG RG    PG  G    P +  L  D
Sbjct: 266 RGPPGPPGIRGPPGPPG-----GEKGEKGEQGEPGKRG---KPGKDGENGQPGIPGLPGD 317

Query: 90  PGVRGLVADPGVRGLVAD---PGVRGLAAALMVRGLVAA-----ALMGCRQGGSRRESGA 141
           PG  G     G +G   D   PG  GL       G+         L G    G + E G 
Sbjct: 318 PGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGL--PGEKGERGF 375

Query: 142 RCIRRPAGVTAAPETAGHG 160
             I+ P G+   P  A  G
Sbjct: 376 PGIQGPPGLPGPPGAAVMG 394



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 19/74 (25%), Positives = 30/74 (40%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
           G+   P  + +   PG+ G    PG+ G+    G  G    P       + G  G    P
Sbjct: 81  GIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFP 140

Query: 100 GVRGLVADPGVRGL 113
           G++G    PG+ G+
Sbjct: 141 GLQGPPGPPGIPGM 154



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 54  PGVRGLVADPGVRGLVADPG----VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           PG+ G    PG  G   +PG      G+  D         PG+ GL   PG  GL   PG
Sbjct: 529 PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG 588

Query: 110 VRGLAAALMVRG 121
            +G    +  +G
Sbjct: 589 PKGEPGGITFKG 600



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVAD-----PVVRRLVADPGVRGLVADPGVRGLVADPGV 74
           V+G      + G +  P + G+  +     P    +   PG RG    PG  G +  PG 
Sbjct: 820 VQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGS 879

Query: 75  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            GL             G  G++  PG  G +  PG  G+
Sbjct: 880 PGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV 918



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG  GL   PG+ G   D G+ G+  +P +     +PG  G    PGV+G    PG  G
Sbjct: 1191 NPGPPGL---PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF---PGVQGPPGPPGSPG 1244

Query: 113  LA 114
             A
Sbjct: 1245 PA 1246



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 45   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
            P +     +PG +G    PG+ G    PG+ G   +  ++    +PG  GL   PG++G 
Sbjct: 1245 PALEGPKGNPGPQGPPGRPGLPGPEGPPGLPG---NGGIKGEKGNPGQPGLPGLPGLKGD 1301

Query: 105  VADPGVRG 112
               PG++G
Sbjct: 1302 QGPPGLQG 1309



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG RG   D G+ G    PG +G+   P +      PG+ G+    G  G    PG  G
Sbjct: 71  PGPRGQKGDDGIPG---PPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNG 126



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 18/58 (31%), Positives = 23/58 (39%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G+ G    PG+ GL   PG  G       +      G +GL   PG  G    PG +G
Sbjct: 488 GISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKG 545



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G+   P   GL   P         G+ G     G RG    PG  GL   P        P
Sbjct: 96  GLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPP------GPP 149

Query: 91  GVRGLVADPGVRGLVADPGVRG 112
           G+ G+  +PG   + + PG +G
Sbjct: 150 GIPGMKGEPGSIIMSSLPGPKG 171



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD----PG 109
           PG+ GL   PG  G     G +G       + L   PG  G    PG +G   D    PG
Sbjct: 496 PGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPG 555

Query: 110 VRG 112
           ++G
Sbjct: 556 MKG 558



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G+   S V G+  D    GL   P +     + G +G    PG  G + DP + G   + 
Sbjct: 911 GIPGRSGVPGLKGDD---GLQGQPGLPGPTGEKGSKGEPGLPGPPGPM-DPNLLGSKGEK 966

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
               L   PG+ G+    G +GL  DPG  GL+
Sbjct: 967 GEPGL---PGIPGVSGPKGYQGLPGDPGQPGLS 996



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA-----DPVVRRLVADP 90
            P + G   D  +  +  +PG+ G   +PG  G    PGV+G         P +     +P
Sbjct: 1198 PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF---PGVQGPPGPPGSPGPALEGPKGNP 1254

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G +G    PG+ G    PG+ G
Sbjct: 1255 GPQGPPGRPGLPGPEGPPGLPG 1276



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 6/96 (6%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLV---ADPVVRRL 86
           RG   D  + G      +R     PG  G    PG+ G    PG +G+         R  
Sbjct: 74  RGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGF 133

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              PG  GL   PG  G+   PG++G   ++++  L
Sbjct: 134 PGSPGFPGLQGPPGPPGI---PGMKGEPGSIIMSSL 166



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 31/130 (23%), Positives = 44/130 (33%), Gaps = 1/130 (0%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P   G +  P    L    G  G     G  G++  PG  G +  P    +   
Sbjct: 862 RGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGL 921

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR-QGGSRRESGARCIRRPA 148
            G  GL   PG+ G   + G +G        G +   L+G + + G     G   +  P 
Sbjct: 922 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPK 981

Query: 149 GVTAAPETAG 158
           G    P   G
Sbjct: 982 GYQGLPGDPG 991



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLV--- 87
           G    P  RG   D  +       G+RG    PG  G    PG+ G    P  + +    
Sbjct: 66  GPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCN 125

Query: 88  ADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIR 145
              G RG    PG  GL   PG  G+     ++G   + +M    G  G+    G   I+
Sbjct: 126 GTKGERGFPGSPGFPGLQGPPGPPGIPG---MKGEPGSIIMSSLPGPKGNPGYPGPPGIQ 182

Query: 146 RPAGVTAAPETAG 158
              G T  P   G
Sbjct: 183 GLPGPTGIPGPIG 195



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 2/101 (1%)

Query: 15  GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
           G  L   GM  +    G    P + GL   P    L   PG +G       +G    PG 
Sbjct: 548 GDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGN 607

Query: 75  RGLVADPVVRRLVADPGV--RGLVADPGVRGLVADPGVRGL 113
            GL   P     +  PG    G V + G++G+  +PG  G+
Sbjct: 608 PGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGI 648



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVA-----DPVVRRLVADPGVRGLVADPGVRGLVAD 107
           D G  G    PG  GL   PG +G V       P+    +   GV+G    PG+ G +  
Sbjct: 776 DRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQ 835

Query: 108 PGVRGL 113
           PG+ G+
Sbjct: 836 PGLHGI 841



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G +   G RG    PG  G         L   PG +G V   G  G +  PG+ G+
Sbjct: 765 PGFKGALGPKGDRGFPGPPGPPGRTG------LDGLPGPKGDVGPNGQPGPMGPPGLPGI 818



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 11/70 (15%)

Query: 54   PGVRGLVADPG-----VRGLVADPGVRGLVADPVV------RRLVADPGVRGLVADPGVR 102
            PGV+G    PG     + G   +PG +G    P +        L  + G++G   +PG  
Sbjct: 1231 PGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQP 1290

Query: 103  GLVADPGVRG 112
            GL   PG++G
Sbjct: 1291 GLPGLPGLKG 1300



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P   G    P  R    D G+ G     G+RG    PG  G    P +      PG +G+
Sbjct: 62  PGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGI 121

Query: 96  V---ADPGVRGLVADPGVRGL 113
                  G RG    PG  GL
Sbjct: 122 PGCNGTKGERGFPGSPGFPGL 142


>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
            sapiens]
          Length = 1688

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG+ G   +PG++G V DPG+ GL   P  +     PG  G    PG +G+   PG  G
Sbjct: 1084 EPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG 1143

Query: 113  LAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAGHG 160
            L       G V       + G  G + + G   I  PAG    P   G G
Sbjct: 1144 LPGE---PGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFG 1190



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 6    KSVLWGAGWGSDLVVRGMVANSVVRGMVADPVV---RGLVADPVVRRLVADPGVRGLVAD 62
            K  +   G+     V G    S V G    P +   +G   DP +   +  PG+ G   +
Sbjct: 1026 KGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISS-IGLPGLPGPKGE 1084

Query: 63   PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            PG+ G   +PG++G V DP +  L   PG +G    PG  G    PG +G++
Sbjct: 1085 PGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 26/77 (33%), Positives = 37/77 (48%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G   +P +     +PG++G V DPG+ GL   PG +G    P        PG +G+
Sbjct: 1076 PGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGI 1135

Query: 96   VADPGVRGLVADPGVRG 112
               PG  GL  +PG  G
Sbjct: 1136 SGPPGNPGLPGEPGPVG 1152



 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  N  ++G   +P   GL   P ++     PG++G    PG+ G+  DPG+ G+   P
Sbjct: 1276 GLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFP 1335

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA-ALMVRG 121
             ++     PG  G   +PG+ G    PG+ G +  +++++G
Sbjct: 1336 GMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKG 1376



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 27/82 (32%), Positives = 37/82 (45%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G   +P + G   +P ++  V DPG+ GL   PG +G    PG  G    P  + +   P
Sbjct: 1080 GPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPP 1139

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  GL  +PG  G    PG  G
Sbjct: 1140 GNPGLPGEPGPVGGGGHPGQPG 1161



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 17/99 (17%)

Query: 40   GLVADPVVRRLVAD---PGVRGLVADPGVRGLVADPGVRGL------VADPVVRRL---- 86
            GL+  P ++  + D   PG +G+   PG  G+   PG  GL        DP +  +    
Sbjct: 1018 GLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPG 1077

Query: 87   ----VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
                  +PG+ G   +PG++G V DPG+ GL      +G
Sbjct: 1078 LPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116



 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 27/93 (29%), Positives = 44/93 (47%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            + G   N   +G    P  +GL        L  + G++G   +PG  GL   PG++G   
Sbjct: 1247 LEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQG 1306

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             P ++     PG+ G+  DPG+ G+   PG++G
Sbjct: 1307 PPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKG 1339



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD---PVVRRL 86
            +G+  DP   GL   P    L   PG +G    PG  GL+  PG++G + D   P  + +
Sbjct: 984  QGLPGDPGQPGLSGQP---GLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGV 1040

Query: 87   VADPGVRGLVADPGVRGLVADPGVRG 112
               PG  G+   PG  GL    G +G
Sbjct: 1041 EGPPGPSGVPGQPGSPGLPGQKGDKG 1066



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            + G   +P  +G    P  + L    G  GL  + G++G   +PG  GL   P ++    
Sbjct: 1247 LEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQG 1306

Query: 89   DPGVRGLVADPGVRGLVADPGVRGL 113
             PG++G    PG+ G+  DPG+ G+
Sbjct: 1307 PPGLQGNPGRPGLNGMKGDPGLPGV 1331



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G   N  ++G V DP + GL   P  +     PG  G    PG +G+   PG  GL  +P
Sbjct: 1089 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEP 1148

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
                 V   G  G    PG +G     G+ G A
Sbjct: 1149 ---GPVGGGGHPGQPGPPGEKGKPGQDGIPGPA 1178



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 15   GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
            G  ++++G   ++   G+   P ++GL      + L   PG  G   DPG  GL    G 
Sbjct: 1369 GQSIIIKG---DAGPPGIPGQPGLKGLPGPQGPQGL---PGPTGPPGDPGRNGLPGFDGA 1422

Query: 75   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA 115
             G   DP    L   PG RGL   PG  GL   PG  G ++
Sbjct: 1423 GGRKGDP---GLPGQPGTRGLDGPPGPDGLQGPPGPPGTSS 1460



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 2/128 (1%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G   +P  +     PG +GL    G  GL  + G++G   +P    L   PG++G 
Sbjct: 1245 PALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGD 1304

Query: 96   VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAA 153
               PG++G    PG+ G+     + G+     M    G  GS    G   +  P G    
Sbjct: 1305 QGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGL 1364

Query: 154  PETAGHGL 161
            P  +G  +
Sbjct: 1365 PGPSGQSI 1372



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G+      + L  DPG  GL   PG+ G    PG +G    P    L+  PG++G 
Sbjct: 972  PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPG---PPGPKGNPGLPGQPGLIGPPGLKGT 1028

Query: 96   VAD---PGVRGLVADPGVRGL 113
            + D   PG +G+   PG  G+
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGV 1049



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG---LVADPVVRRL 86
           RG    P   GL   P        PG+ G+  +PG   + + PG +G       P ++ L
Sbjct: 131 RGFPGSPGFPGLQGPP------GPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGL 184

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
               G+ G +  PG  GL+  PG  GL              MG    G + E G + ++ 
Sbjct: 185 PGPTGIPGPIGPPGPPGLMGPPGPPGLPG--------PKGNMGLNFQGPKGEKGEQGLQG 236

Query: 147 PAG 149
           P G
Sbjct: 237 PPG 239



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G   N    G+   P ++G    P ++     PG+ G+  DPG+ G+   PG++G   
Sbjct: 1283 IKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSG 1342

Query: 80   DPVVRRLVADPGVRGLVADPGVRG-------LVADPGVRGLAAALMVRGL 122
             P       +PG+ G    PG+ G       +  D G  G+     ++GL
Sbjct: 1343 VPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGL 1392



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRR---LV 87
           G V +  ++G+  +P        PG+ G   DPG    +  PG  GL  +P       L 
Sbjct: 629 GPVGEKGIQGVAGNP------GQPGIPGPKGDPGQT--ITQPGKPGLPGNPGRDGDVGLP 680

Query: 88  ADPGVRGLVADPGVRGLVADPGVRGL 113
            DPG+ G    PG+ G   +PG+ G+
Sbjct: 681 GDPGLPGQPGLPGIPGSKGEPGIPGI 706



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 44   DPVVRRLVADPGVRGLVADPGV------RGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
            DP +     + G  GL   PGV      +GL  DPG  GL   P    L   PG +G   
Sbjct: 956  DPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQP---GLPGPPGPKGNPG 1012

Query: 98   DPGVRGLVADPGVRG 112
             PG  GL+  PG++G
Sbjct: 1013 LPGQPGLIGPPGLKG 1027



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           ++ PG  GL   PG  GL   PG  G    P     + +PG  G    PG +GL  + GV
Sbjct: 416 ISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDE--ICEPGPPGPPGSPGDKGLQGEQGV 473

Query: 111 RG 112
           +G
Sbjct: 474 KG 475



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL-------VADPGVRGLVADPGVRG 103
           + +PG  G    PG +GL  + GV+G   D     +          PG+ GL   PG  G
Sbjct: 450 ICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLG 509

Query: 104 LVADPGVRGLAAALMVRGL 122
                G +G A A   +GL
Sbjct: 510 FPGQKGEKGQAGATGPKGL 528



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRG-LVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           V + G++G+  +PG  G+    G  G  +  P    L  +PG  G V  PG  GL   PG
Sbjct: 631 VGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG 690

Query: 110 VRGLAAALMVRGLVAAALMG 129
           + G+  +    G+    L G
Sbjct: 691 LPGIPGSKGEPGIPGIGLPG 710



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVAD-----PVVRRLVADPGVRGLVADPGVRGLVADPG 109
           GV+G    PG+ G +  PG+ G+  +     P    +   PG RG    PG  G +  PG
Sbjct: 819 GVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPG 878

Query: 110 VRGL 113
             GL
Sbjct: 879 SPGL 882



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 54  PGVRGLVADPGVRGLVADP----GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           PG RG    PG+RG    P    G +G   +P  R     PG  G    PG+ GL  DPG
Sbjct: 263 PGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKR---GKPGKDGENGQPGIPGLPGDPG 319

Query: 110 VRG 112
             G
Sbjct: 320 YPG 322



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVR--GLVADPVVRRLVADPGVRGLVADPGVRGLVAD 107
           L  DPG+ G    PG+ G   +PG+   GL   P  +     PG  G    PG  GL   
Sbjct: 679 LPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP 738

Query: 108 PGVRG 112
           PG  G
Sbjct: 739 PGPPG 743



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG+ G    PG  G    PG RG   D     +   PG +G+   PG+ G    PG+ G+
Sbjct: 53  PGLEGHPGLPGFPGPEGPPGPRGQKGDD---GIPGPPGPKGIRGPPGLPGFPGTPGLPGM 109



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 29  VRGMVADPVVRGLVADP---VVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRR 85
           ++G    P + G+  +P   ++  L    G  G    PG++GL    G+ G +  P    
Sbjct: 142 LQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPG 201

Query: 86  LVADPGVRGLVADPGVRGL 104
           L+  PG  GL    G  GL
Sbjct: 202 LMGPPGPPGLPGPKGNMGL 220



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRG--LVADPGVRGLVADPVVRRLVADPGVRGLVA 97
           GL  DP +      PG+ G   +PG+ G  L   PG +G    P        PG  GL  
Sbjct: 678 GLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEG 737

Query: 98  DPGVRGLVADPGVRGLA 114
            PG  G     G  G A
Sbjct: 738 PPGPPGFPGPKGEPGFA 754



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 40/139 (28%), Positives = 50/139 (35%), Gaps = 18/139 (12%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P +RG    P       + G +G   +PG RG    PG  G    P +  L  D
Sbjct: 266 RGPPGPPGIRGPPGPPG-----GEKGEKGEQGEPGKRG---KPGKDGENGQPGIPGLPGD 317

Query: 90  PGVRGLVADPGVRGLVAD---PGVRGLAAALMVRGLVAA-----ALMGCRQGGSRRESGA 141
           PG  G     G +G   D   PG  GL       G+         L G    G + E G 
Sbjct: 318 PGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGL--PGEKGERGF 375

Query: 142 RCIRRPAGVTAAPETAGHG 160
             I+ P G+   P  A  G
Sbjct: 376 PGIQGPPGLPGPPGAAVMG 394



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 19/74 (25%), Positives = 30/74 (40%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
           G+   P  + +   PG+ G    PG+ G+    G  G    P       + G  G    P
Sbjct: 81  GIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFP 140

Query: 100 GVRGLVADPGVRGL 113
           G++G    PG+ G+
Sbjct: 141 GLQGPPGPPGIPGM 154



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 54  PGVRGLVADPGVRGLVADPG----VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           PG+ G    PG  G   +PG      G+  D         PG+ GL   PG  GL   PG
Sbjct: 529 PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG 588

Query: 110 VRGLAAALMVRG 121
            +G    +  +G
Sbjct: 589 PKGEPGGITFKG 600



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVAD-----PVVRRLVADPGVRGLVADPGVRGLVADPGV 74
           V+G      + G +  P + G+  +     P    +   PG RG    PG  G +  PG 
Sbjct: 820 VQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGS 879

Query: 75  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            GL             G  G++  PG  G +  PG  G+
Sbjct: 880 PGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV 918



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG  GL   PG+ G   D G+ G+  +P +     +PG  G    PGV+G    PG  G
Sbjct: 1191 NPGPPGL---PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF---PGVQGPPGPPGSPG 1244

Query: 113  LA 114
             A
Sbjct: 1245 PA 1246



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG RG   D G+ G    PG +G+   P +      PG+ G+    G  G    PG  G
Sbjct: 71  PGPRGQKGDDGIPG---PPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNG 126



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 18/58 (31%), Positives = 23/58 (39%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G+ G    PG+ GL   PG  G       +      G +GL   PG  G    PG +G
Sbjct: 488 GISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKG 545



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P + G   D  +  +  +PG+ G   +PG  G    PGV+G    P        P + G 
Sbjct: 1198 PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF---PGVQGPPGPPG----SPGPALEGP 1250

Query: 96   VADPGVRGLVADPGVRGL 113
              +PG +G    PG +GL
Sbjct: 1251 KGNPGPQGPPGRPGFQGL 1268



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G+   P   GL   P         G+ G     G RG    PG  GL   P        P
Sbjct: 96  GLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPP------GPP 149

Query: 91  GVRGLVADPGVRGLVADPGVRG 112
           G+ G+  +PG   + + PG +G
Sbjct: 150 GIPGMKGEPGSIIMSSLPGPKG 171



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD----PG 109
           PG+ GL   PG  G     G +G       + L   PG  G    PG +G   D    PG
Sbjct: 496 PGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPG 555

Query: 110 VRG 112
           ++G
Sbjct: 556 MKG 558



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G+   S V G+  D    GL   P +     + G +G    PG  G + DP + G   + 
Sbjct: 911 GIPGRSGVPGLKGDD---GLQGQPGLPGPTGEKGSKGEPGLPGPPGPM-DPNLLGSKGEK 966

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
               L   PG+ G+    G +GL  DPG  GL+
Sbjct: 967 GEPGL---PGIPGVSGPKGYQGLPGDPGQPGLS 996



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 6/96 (6%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLV---ADPVVRRL 86
           RG   D  + G      +R     PG  G    PG+ G    PG +G+         R  
Sbjct: 74  RGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGF 133

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              PG  GL   PG  G+   PG++G   ++++  L
Sbjct: 134 PGSPGFPGLQGPPGPPGI---PGMKGEPGSIIMSSL 166



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 31/130 (23%), Positives = 44/130 (33%), Gaps = 1/130 (0%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P   G +  P    L    G  G     G  G++  PG  G +  P    +   
Sbjct: 862 RGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGL 921

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR-QGGSRRESGARCIRRPA 148
            G  GL   PG+ G   + G +G        G +   L+G + + G     G   +  P 
Sbjct: 922 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPK 981

Query: 149 GVTAAPETAG 158
           G    P   G
Sbjct: 982 GYQGLPGDPG 991



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLV--- 87
           G    P  RG   D  +       G+RG    PG  G    PG+ G    P  + +    
Sbjct: 66  GPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCN 125

Query: 88  ADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIR 145
              G RG    PG  GL   PG  G+     ++G   + +M    G  G+    G   I+
Sbjct: 126 GTKGERGFPGSPGFPGLQGPPGPPGIPG---MKGEPGSIIMSSLPGPKGNPGYPGPPGIQ 182

Query: 146 RPAGVTAAPETAG 158
              G T  P   G
Sbjct: 183 GLPGPTGIPGPIG 195



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 2/101 (1%)

Query: 15  GSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 74
           G  L   GM  +    G    P + GL   P    L   PG +G       +G    PG 
Sbjct: 548 GDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGN 607

Query: 75  RGLVADPVVRRLVADPGV--RGLVADPGVRGLVADPGVRGL 113
            GL   P     +  PG    G V + G++G+  +PG  G+
Sbjct: 608 PGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGI 648



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVA-----DPVVRRLVADPGVRGLVADPGVRGLVAD 107
           D G  G    PG  GL   PG +G V       P+    +   GV+G    PG+ G +  
Sbjct: 776 DRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQ 835

Query: 108 PGVRGL 113
           PG+ G+
Sbjct: 836 PGLHGI 841



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G +   G RG    PG  G         L   PG +G V   G  G +  PG+ G+
Sbjct: 765 PGFKGALGPKGDRGFPGPPGPPGRTG------LDGLPGPKGDVGPNGQPGPMGPPGLPGI 818



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P   G    P  R    D G+ G     G+RG    PG  G    P +      PG +G+
Sbjct: 62  PGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGI 121

Query: 96  V---ADPGVRGLVADPGVRGL 113
                  G RG    PG  GL
Sbjct: 122 PGCNGTKGERGFPGSPGFPGL 142


>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
          Length = 1669

 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVR--GLVADPGVRGLVADPGVRGL 77
           V G+  +    G    P   GL  +P V+    +PGV   GL   PG+ G+   PG +G 
Sbjct: 700 VDGLPGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGS 759

Query: 78  VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
           +  P V      PG  G +  PG++G+  +PG  GL  ++   G+      G R
Sbjct: 760 IGVPGV------PGEHGAIGPPGLQGIRGEPGPPGLPGSVGSPGVPGIGPPGAR 807



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 36/125 (28%), Positives = 48/125 (38%), Gaps = 10/125 (8%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P +RG   D  +      PG +G     G+ G+   PG++G    P        PG+ G 
Sbjct: 1060 PGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKG---SPGSVGYPGSPGLPGE 1116

Query: 96   VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPE 155
              D G+ GL   PGV+G A      G    A       G + E G+  I   AG    P 
Sbjct: 1117 KGDKGLPGLDGIPGVKGEAGLPGTPGPTGPA-------GQKGEPGSDGIPGSAGEKGEPG 1169

Query: 156  TAGHG 160
              G G
Sbjct: 1170 LPGRG 1174



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 31  GMVADPVVRGLVADPVV---RRLVADPGVRGLVADPGVRGL---VADPGVRGLVADPVVR 84
           G+   P  +G +  P V      +  PG++G+  +PG  GL   V  PGV G +  P  R
Sbjct: 749 GIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGIRGEPGPPGLPGSVGSPGVPG-IGPPGAR 807

Query: 85  RLVADPGVRGLVADPGVRGLVADPGVRGL 113
                 G  GL   PG++G    PG  GL
Sbjct: 808 GPPGGQGPPGLSGPPGIKGEKGFPGFPGL 836



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 8/133 (6%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVR--GLVADPGVRGLVADPGVRGLVADPVVRRLV 87
           RG    P   GL   P  +  V  PG+   G     GV GL  D G  G    P    L 
Sbjct: 666 RGFPGTPGRPGL---PGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLP 722

Query: 88  ADPGVRGLVADPGV--RGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIR 145
            +PGV+G   +PGV   GL   PG+ G+      +G +    +   + G+    G + IR
Sbjct: 723 GNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVP-GEHGAIGPPGLQGIR 781

Query: 146 RPAGVTAAPETAG 158
              G    P + G
Sbjct: 782 GEPGPPGLPGSVG 794



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 54   PGVRGLVADPGVRG----LVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
            PG +GL   PG  G    +  +PG+ G    P ++ L   PG +G     G+ G+   PG
Sbjct: 1337 PGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVGIPGPPG 1396

Query: 110  VRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            + G   A   +G          + G    +G R    P G    P + G
Sbjct: 1397 IPGFDGAPGQKG----------EMGPAGPTGPRGFPGPPGPDGLPGSMG 1435



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 19/109 (17%)

Query: 54  PGVRGLVADPGVR---GLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           PG++G++  PG++   G    PG +G   +P +      PG +G    PG  G   +PG+
Sbjct: 54  PGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGL------PGTKGTRGPPGASGYPGNPGL 107

Query: 111 RGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGH 159
            G+       G     + GC        +G +  R P G    P  AG+
Sbjct: 108 PGIPGQDGPPG--PPGIPGC--------NGTKGERGPLGPPGLPGFAGN 146



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 6/103 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVAD------PVVRRLVADPGVRGLVADPGVRGLVAD 107
           PG +G    PG  G   +PG+ G+         P +       G RG +  PG+ G   +
Sbjct: 87  PGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGN 146

Query: 108 PGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
           PG  GL       G +   + G    G R   G      P G+
Sbjct: 147 PGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGIPGTPGPPGL 189



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL-- 86
           +RG    P + G V  P V   +  PG RG     G  GL   PG++G    P    L  
Sbjct: 780 IRGEPGPPGLPGSVGSPGVPG-IGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDM 838

Query: 87  ---VADPGVRGLVADPGVRGLVADPGVRG 112
                D G +GL    G  GL   PG +G
Sbjct: 839 PGPKGDKGAQGLPGITGQSGLPGLPGQQG 867



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 35/128 (27%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G+  D    GL   P     V    ++G   D G +G +   G +G   DP    +   P
Sbjct: 921  GLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPGV---P 977

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
            G  G    PG  G   DPG+ G   A  + G    ++ G    G+  E G   I  P G 
Sbjct: 978  GKDGQAGQPGQPGPKGDPGISGTPGAPGLPG-PKGSVGGMGLPGTPGEKGVPGIPGPQGS 1036

Query: 151  TAAPETAG 158
               P   G
Sbjct: 1037 PGLPGDKG 1044



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G   +   +G +     +G   DP    +   PG  G    PG  G   DPG+ G   
Sbjct: 946  MKGQKGDQGEKGQIGPIGEKGSRGDPGTPGV---PGKDGQAGQPGQPGPKGDPGISGTPG 1002

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             P +       G  GL   PG +G+   PG +G
Sbjct: 1003 APGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQG 1035



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            ++G   D   +G +     +    DPG  G+   PG  G    PG  G   DP +     
Sbjct: 946  MKGQKGDQGEKGQIGPIGEKGSRGDPGTPGV---PGKDGQAGQPGQPGPKGDPGISGTPG 1002

Query: 89   DPGVRGLVADPGVRGLVADPGVRGL 113
             PG+ G     G  GL   PG +G+
Sbjct: 1003 APGLPGPKGSVGGMGLPGTPGEKGV 1027



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG+ G+  D G  G    PGV G   DP  +      G+ G+   PG+ G   D G  G+
Sbjct: 1259 PGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQ------GMPGIGGSPGITGSKGDMGPPGV 1312

Query: 114  AAALMVRGLVAAALMGCR-QGGSRRESGARCIRRPAG 149
                  +GL    L G +   G +   GA+ +  P G
Sbjct: 1313 PGFQGPKGL--PGLQGIKGDQGDQGVPGAKGLPGPPG 1347



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            +RG   +  + G    P  +G      +  +   PG++G    PG  G    PG+ G   
Sbjct: 1062 LRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGS---PGSVGYPGSPGLPGEKG 1118

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            D  +  L   PGV+G    PG  G     G +G
Sbjct: 1119 DKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKG 1151



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L   PG  GL   PG  G   D G  G    P +      PG +G V  PG+ G    PG
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGL------PGEKGAVGQPGI-GFPGPPG 696

Query: 110 VRGL 113
            +G+
Sbjct: 697 PKGV 700



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 2/119 (1%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G+   P    L   PG  G    PG+ G   D G+ GL   P V+     PG  G     
Sbjct: 1088 GIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPA 1147

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            G +G     G+ G A      GL      G    G++ + G++      G+  +P   G
Sbjct: 1148 GQKGEPGSDGIPGSAGEKGEPGLPGRGFPGF--PGAKGDKGSKGEVGFPGLAGSPGIPG 1204



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 36   PVVRGLVAD------PVVRRLVADPGVRG----LVADPGVRGLVADPGVRGLVADPVVRR 85
            P ++G+  D      P  + L   PG  G    +  +PG+ G    PG++GL   P  + 
Sbjct: 1322 PGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPKG 1381

Query: 86   LVADPGVRGLVADPGVRGLVADPGVRG 112
                 G+ G+   PG+ G    PG +G
Sbjct: 1382 QQGVTGLVGIPGPPGIPGFDGAPGQKG 1408



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD---PGVRGLVADPGV 110
           PG +G    PG  G   + GV G    P     V  PG+ G   D   PG  G   DPG+
Sbjct: 863 PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGL 922

Query: 111 RG 112
           +G
Sbjct: 923 KG 924



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 20/112 (17%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL---- 86
            G    P   G   DP +      PG+ G     G  GL   PG +G+   P  +      
Sbjct: 981  GQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLP 1040

Query: 87   ----------------VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
                            +  PG+RG   D G+ G    PG +G   ++ + G+
Sbjct: 1041 GDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGM 1092



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 3/102 (2%)

Query: 12   AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
            AG+      +G   +  + GM   P   GL   P        PG+ G   D G+ GL   
Sbjct: 1072 AGFPGSPGEKGEKGSIGIPGMPGSP---GLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGI 1128

Query: 72   PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PGV+G    P         G +G     G+ G   + G  GL
Sbjct: 1129 PGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGL 1170



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 31/112 (27%), Positives = 38/112 (33%), Gaps = 16/112 (14%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVR----------RLVADPGVRGLVADPGVRGLVA 70
           RG+     V G+       GL+  P  +          RL  D G  G    PG+ G   
Sbjct: 500 RGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMTGRAG 559

Query: 71  DPG------VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAA 116
            PG      + G    P    L  + G  G V  PG RG    PG  G   A
Sbjct: 560 SPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPA 611



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 14/86 (16%)

Query: 41  LVADPVVRRLVADPGVRGLVAD---PGVRGLVADPGVRGLVADP-----------VVRRL 86
           L   P    L   PG  G   D   PG  G    PG +G V  P            V  L
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 87  VADPGVRGLVADPGVRGLVADPGVRG 112
             D G  G    PG  GL  +PGV+G
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQG 729



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            G RG    PG+ GL    G  GL   P +  +  D G  G    PGV G   DPG +G+
Sbjct: 1236 GDRGPQGQPGLPGLPGPMGPPGL---PGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGM 1291



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 45   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
            P +  +  D G  G    PGV G   DPG +G+        +   PG+ G   D G  G+
Sbjct: 1259 PGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPG------IGGSPGITGSKGDMGPPGV 1312

Query: 105  VADPGVRGLAAALMVRG 121
                G +GL     ++G
Sbjct: 1313 PGFQGPKGLPGLQGIKG 1329



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 21/60 (35%), Positives = 25/60 (41%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G +GL    G  GL   PG +G    P       + GV G    PG  G V  PG+ G
Sbjct: 844 DKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPG 903



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 19/98 (19%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGV-------------RGLVADPGVRG 76
           RG +  P + G   +P        PG+ G+  DPG              RG    PG  G
Sbjct: 132 RGPLGPPGLPGFAGNP------GPPGLPGMKGDPGEILGHVPGMLLKGERGFPGIPGTPG 185

Query: 77  LVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
               P ++  V  PG  G    PG  G   + G  GL+
Sbjct: 186 PPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLS 223



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G    P V G   DP  + +    G  G+    G  G    PG +G    P ++ +  D 
Sbjct: 1272 GWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQ 1331

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G +G+   PG +GL   PG  G
Sbjct: 1332 GDQGV---PGAKGLPGPPGPPG 1350



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 48  RRLVADPGVRGLVADPGVRGLVADPGVRG----------LVADPVVRRLVADPGVRGLVA 97
           R L    GV G+    G  GL+  PG +G          L  D         PG+ G   
Sbjct: 500 RGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMTGRAG 559

Query: 98  DPGVRGLVADPGVRGLAAALMVRG 121
            PG  G    PG +G   ++ ++G
Sbjct: 560 SPGRDGHPGLPGPKGSPGSVGLKG 583



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G RG     G  G +  PG  G   D   R L    GV G+    G  GL+  PG +G
Sbjct: 474 GYRGPPGPQGPPGEIGFPGQPGAKGD---RGLPGRDGVAGVPGPQGTPGLIGQPGAKG 528



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           DPG++G   D G  GL   PG    V    ++    D G +G +   G +G   DPG  G
Sbjct: 919 DPGLKG---DKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPG 975

Query: 113 L 113
           +
Sbjct: 976 V 976



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG+ G    PG+ G     G  G++  P        PG  G V  PG+ G   D G  G
Sbjct: 860 PGLPGQQGAPGIPGFPGSKGEMGVMGTP------GQPGSPGPVGAPGLPGEKGDHGFPG 912



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 40  GLVADPVVRRLVADPGVRGL-----VADPGVRGLVADPGVRGLVADPVVRRLVADPGVRG 94
           GL   P ++     PG  GL       D G +GL   PG+ G    P +      PG+ G
Sbjct: 817 GLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGL---PGITGQSGLPGLPGQQGAPGIPG 873

Query: 95  LVADPGVRGLVADPGVRGLAAALMVRGL 122
                G  G++  PG  G    +   GL
Sbjct: 874 FPGSKGEMGVMGTPGQPGSPGPVGAPGL 901



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 4/76 (5%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRG----LVADPVVRRLVADPGVRGLVADPGVRGLVA 106
           + D G  G    PG  GL    G  G    L   P    L   PG  G   D G  G   
Sbjct: 614 IGDKGQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPGFPGPQGDRGFPGTPG 673

Query: 107 DPGVRGLAAALMVRGL 122
            PG+ G   A+   G+
Sbjct: 674 RPGLPGEKGAVGQPGI 689



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G V    + G   +  V G+        L  D G +G     G  G +  PG+RG   D
Sbjct: 1010 KGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGD 1068

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
              +      PG +G     G+ G+   PG  GL
Sbjct: 1069 QGIAGFPGSPGEKGEKGSIGIPGM---PGSPGL 1098



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  G   D G +G V  PG+ G    P         G +G +  PG +G    PG  G 
Sbjct: 1176 PGFPGAKGDKGSKGEVGFPGLAGSPGIP------GSKGEQGFMGPPGPQGQPGLPGSPGH 1229

Query: 114  A 114
            A
Sbjct: 1230 A 1230



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 7/59 (11%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G   +PG +G    PG  G    PV       PG  G    PG RG   D G  G
Sbjct: 349 PGTPGPRGEPGPKGFPGLPGQPGPPGLPV-------PGQAGAPGFPGERGEKGDRGFPG 400



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P ++G++  P ++      G  G   D G  GL    G RG    P       +PG+ G+
Sbjct: 54  PGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRG---PPGASGYPGNPGLPGI 110

Query: 96  VADPGVRGLVADPGVRGLAAALMVRG 121
              PG  G    PG+ G       RG
Sbjct: 111 ---PGQDGPPGPPGIPGCNGTKGERG 133



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           + G V   +++G    P + G    P +  L    G  G    PG  G    PG +G + 
Sbjct: 162 ILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMG 221

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
                  ++  G +G   D G +G+   PGV G A
Sbjct: 222 -------LSFQGPKG---DKGDQGVSGPPGVPGQA 246



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 6/66 (9%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLV------ADPVVRRLVADPGVRGLVADPGVRGLVAD 107
           PG+ G     G +G    PG  G+V       +   R     PG RG     G  GL   
Sbjct: 310 PGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQ 369

Query: 108 PGVRGL 113
           PG  GL
Sbjct: 370 PGPPGL 375



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 58  GLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G+    G RGL   PG++G++  P ++      G  G   D G  GL    G RG
Sbjct: 43  GVKGQKGERGL---PGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRG 94



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G    P ++GL   P  +      G+ G+   PG+ G    PG +G +            
Sbjct: 1363 GPEGPPGLKGLQGLPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGP------AGPT 1416

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G RG    PG  GL    G  G
Sbjct: 1417 GPRGFPGPPGPDGLPGSMGPPG 1438



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 9/56 (16%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           PG  G    PG +G    PG  G+   P         G  GL+  PG +G   +PG
Sbjct: 485 PGEIGFPGQPGAKGDRGLPGRDGVAGVP------GPQGTPGLIGQPGAKG---EPG 531



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 50   LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
            L   PG+ G   + G  G     G  GL   P         G RG    PG+ GL    G
Sbjct: 1196 LAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPG-HATEGPKGDRGPQGQPGLPGLPGPMG 1254

Query: 110  VRGLAAALMVRG 121
              GL     V+G
Sbjct: 1255 PPGLPGIDGVKG 1266


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 10/108 (9%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP---GV 110
           PG  G   +PGV G V   G  G    P  R     PG +G   +PG+RG + +P   G 
Sbjct: 615 PGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGA 674

Query: 111 RGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           RG   A+   G   A        G R E+GA     PAG   +P   G
Sbjct: 675 RGAPGAVGAPGPAGAT-------GDRGEAGAAGPAGPAGPRGSPGERG 715



 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 6/62 (9%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVR---GLVADPGV 110
           PG +GL+  PG+ GL    G RGL   P V   V +PG  G+   PG R   G V  PGV
Sbjct: 861 PGPQGLLGAPGILGLPGSRGERGL---PGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGV 917

Query: 111 RG 112
            G
Sbjct: 918 NG 919



 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           + G  G    PG +GL+  PG+ GL      R L   PGV G V +PG  G+   PG RG
Sbjct: 851 EAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGL---PGVAGAVGEPGPLGIAGPPGARG 907

Query: 113 LAAALMVRGLVAAALMGCRQG 133
              A+   G+  A     R G
Sbjct: 908 PPGAVGSPGVNGAPGEAGRDG 928



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G    +   G    P  +GL+  P +  L    G RGL   PGV G V +PG  G+   
Sbjct: 846 KGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGL---PGVAGAVGEPGPLGIAGP 902

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           P  R      G  G V  PGV G   + G  G
Sbjct: 903 PGAR------GPPGAVGSPGVNGAPGEAGRDG 928



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G +G   + G  G    PG +GL+  P +  L    G RGL   PGV G V +PG  G+A
Sbjct: 844 GEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGL---PGVAGAVGEPGPLGIA 900

Query: 115 AALMVRG 121
                RG
Sbjct: 901 GPPGARG 907



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG+V     RG    P +      PG +G+    G+ GL   PG  G+  +P        
Sbjct: 156 RGVVGPQGARGFPGTPGL------PGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGT 209

Query: 90  PGVRGLVADPGVRGLVADPGVRG 112
           PG  G    PG RG V  PG  G
Sbjct: 210 PGQTGARGLPGERGRVGAPGPAG 232



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 39/145 (26%), Positives = 49/145 (33%), Gaps = 10/145 (6%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADP------GVRGLVADPG 73
           V G V  +   G    P  RG    P  +    +PG+RG + +P      G  G V  PG
Sbjct: 626 VVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPG 685

Query: 74  VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG 133
             G   D          G  G    PG RG V   G  G A      G   A      + 
Sbjct: 686 PAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAK----GER 741

Query: 134 GSRRESGARCIRRPAGVTAAPETAG 158
           G++   G   +  P G   A   AG
Sbjct: 742 GAKGPKGENGVVGPTGPVGAAGPAG 766



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 54  PGVRGLVADPGVRGLVADPGV---RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           PG RG+V   G RG    PG+   +G+     +  L   PG  G+  +PG  G    PG 
Sbjct: 153 PGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQ 212

Query: 111 RGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            G       RG V A        G+R   G+     PAG
Sbjct: 213 TGARGLPGERGRVGAP----GPAGARGSDGSVGPVGPAG 247



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 30/83 (36%), Positives = 35/83 (42%), Gaps = 12/83 (14%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG V  P + G V  P       +PG  GL    G +G    PGV G    P  R +   
Sbjct: 282 RGEVGLPGLSGPVGPP------GNPGANGLT---GAKGAAGLPGVAGAPGLPGPRGI--- 329

Query: 90  PGVRGLVADPGVRGLVADPGVRG 112
           PG  G     G RGLV +PG  G
Sbjct: 330 PGPVGAAGATGARGLVGEPGPAG 352



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 36/137 (26%), Positives = 46/137 (33%), Gaps = 7/137 (5%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           GM       G    P   G+   P         G+RG   D G  G   + G  G     
Sbjct: 784 GMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFA 843

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGA 141
             +    + G  G    PG +GL+  PG+ GL  +   RGL   A       G+  E G 
Sbjct: 844 GEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVA-------GAVGEPGP 896

Query: 142 RCIRRPAGVTAAPETAG 158
             I  P G    P   G
Sbjct: 897 LGIAGPPGARGPPGAVG 913



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 34/137 (24%), Positives = 46/137 (33%), Gaps = 10/137 (7%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G    +  RG+V +P   G   +   +      G +G     G  G     G  G    P
Sbjct: 334 GAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPP 393

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGA 141
               L   PG RGL    G  G++  PG RG +    VRG            G     G 
Sbjct: 394 GPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRG----------PNGDAGRPGE 443

Query: 142 RCIRRPAGVTAAPETAG 158
             +  P G+  +P   G
Sbjct: 444 PGLMGPRGLPGSPGNIG 460



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 40/124 (32%), Positives = 44/124 (35%), Gaps = 8/124 (6%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
           G    P    L   PG RGL    G  G++  PG RG      VR    D G  G     
Sbjct: 388 GSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLM 447

Query: 100 GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAP 154
           G RGL   PG  G A      G V    +  R G     G+R E G      P G T  P
Sbjct: 448 GPRGLPGSPGNIGPAGK---EGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDP 504

Query: 155 ETAG 158
              G
Sbjct: 505 GKNG 508



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 33/117 (28%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G     G RG    PG  G    P        PG RG+V   G RG    PG+ G
Sbjct: 119 EPGEPGQTGPAGARGPAGPPGKAGEDGHP---GKPGRPGERGVVGPQGARGFPGTPGLPG 175

Query: 113 LAAALMVRGL-----------VAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                   GL           V        + G+  ++GAR +    G   AP  AG
Sbjct: 176 FKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAG 232



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 40/134 (29%), Positives = 51/134 (38%), Gaps = 10/134 (7%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVR---GLVADPGVRGLVADPVVRRLV 87
            G++  P  RG    P V   V +PG  G+   PG R   G V  PGV G   +       
Sbjct: 871  GILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNP 930

Query: 88   ADPGVRGLVADP---GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCI 144
             + G  G    P   G RG   + G  G A A    G V  A     + G+R E+G    
Sbjct: 931  GNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAPGPHGPVGPA----GKHGNRGETGPSGP 986

Query: 145  RRPAGVTAAPETAG 158
              PAG       +G
Sbjct: 987  VGPAGAVGPRGPSG 1000



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 45  PVVRRLVADPGVRGLVADPGV---RGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGV 101
           P  R +V   G RG    PG+   +G+    G+ GL   P    +  +PG  G    PG 
Sbjct: 153 PGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQ 212

Query: 102 RGLVADPGVRGLAAA 116
            G    PG RG   A
Sbjct: 213 TGARGLPGERGRVGA 227



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 11/116 (9%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G +   G  G     G RG V  P +   V  PG  G     G +G    PGV G 
Sbjct: 261 PGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGA 320

Query: 114 AAALMVRGLV----AAALMGCR-------QGGSRRESGARCIRRPAGVTAAPETAG 158
                 RG+     AA   G R         GS+ ESG +     AG    P  +G
Sbjct: 321 PGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSG 376



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 40/149 (26%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 21  RGMVANSVVRGMVADPVV---RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 77
           RG+V     RG    P +   +G+     +  L   PG  G+  +PG  G    PG  G 
Sbjct: 156 RGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGA 215

Query: 78  VADPVVRRLVADPGVRGL------VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
              P  R  V  PG  G       V   G  G +   G  G   A   +G + A      
Sbjct: 216 RGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGP 275

Query: 132 QG--GSRRESGARCIRRPAGVTAAPETAG 158
            G  G R E G   +  P G    P   G
Sbjct: 276 AGPAGPRGEVGLPGLSGPVGPPGNPGANG 304



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 41/147 (27%), Positives = 52/147 (35%), Gaps = 13/147 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G+   S   G V  P  RGL  +  +       G RG   + G  G     G RG    
Sbjct: 555 QGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGP 614

Query: 81  PVVRRLVADPGVRGLVAD---------PGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
           P       +PGV G V           PG RG    PG +G      +RG +        
Sbjct: 615 PGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIG----NPG 670

Query: 132 QGGSRRESGARCIRRPAGVTAAPETAG 158
           + G+R   GA     PAG T     AG
Sbjct: 671 RDGARGAPGAVGAPGPAGATGDRGEAG 697



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 15/111 (13%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           +   G  G    PG +G +   G  G       R  V  PG+ G V  PG      +PG 
Sbjct: 249 IGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPG------NPGA 302

Query: 111 RGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
            GL  A    GL   A       G+    G R I  P G  AA  T   GL
Sbjct: 303 NGLTGAKGAAGLPGVA-------GAPGLPGPRGIPGPVG--AAGATGARGL 344



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 42/142 (29%), Positives = 49/142 (34%), Gaps = 27/142 (19%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL------VADPGV 92
           +G    P V      PG RG+   PG  G     G RGLV +P             +PG 
Sbjct: 309 KGAAGLPGVAGAPGLPGPRGI---PGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGS 365

Query: 93  RGLVADP------------GVRGLVADPGVRGLAAALMVRGLVA----AALMGCRQGGSR 136
            G    P            G  G    PG  GL  +   RGL      A +MG    GSR
Sbjct: 366 AGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMG--PPGSR 423

Query: 137 RESGARCIRRPAGVTAAPETAG 158
             SG   +R P G    P   G
Sbjct: 424 GASGPAGVRGPNGDAGRPGEPG 445



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 22/67 (32%), Positives = 28/67 (41%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G    PG +G+    G +G    P  + L    G  G V  PG RGL  + G+ G A
Sbjct: 526 GNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPA 585

Query: 115 AALMVRG 121
                RG
Sbjct: 586 GPRGERG 592



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 20/59 (33%), Positives = 26/59 (44%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG +G+    G +G    PG +GL         V  PG RGL  + G+ G     G RG
Sbjct: 534 PGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERG 592



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 29/107 (27%), Positives = 36/107 (33%), Gaps = 5/107 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G   D G  G+   PG  G    P    +   PG  G     G+RG   D G  G 
Sbjct: 771 PGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGR 830

Query: 114 AAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
              +   G V        +G  G    +G      P G+  AP   G
Sbjct: 831 TGEV---GAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILG 874



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 26/101 (25%), Positives = 36/101 (35%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G    +  RG        G    P  + +    G +G    PG +GL    G  G V  
Sbjct: 510 KGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGK 569

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
           P  R L  + G+ G     G RG   + G  G    +  RG
Sbjct: 570 PGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRG 610



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           RGL   P     +   G  G V  PG+ G     G  G   +P     +  PG +G   D
Sbjct: 450 RGLPGSP---GNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEP---GNIGFPGPKGPTGD 503

Query: 99  PGVRGLVADPGVRGLAAA 116
           PG  G   D G  GLA A
Sbjct: 504 PGKNG---DKGHAGLAGA 518



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/62 (30%), Positives = 22/62 (35%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           V   G  G    PG  G   D G  G+   P        PG  G+   PG  G     G+
Sbjct: 759 VGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGL 818

Query: 111 RG 112
           RG
Sbjct: 819 RG 820



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/67 (31%), Positives = 24/67 (35%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G V   G  G    PG  G   D     +   PG  G    PG  G+   PG  G A
Sbjct: 754 GPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPA 813

Query: 115 AALMVRG 121
               +RG
Sbjct: 814 GKEGLRG 820



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 29/97 (29%), Positives = 35/97 (36%), Gaps = 8/97 (8%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G RG     G+RG   +PG +G       R L    G  GL   PG+ G   D G  G  
Sbjct: 994  GPRGPSGPQGIRGDKGEPGEKG------PRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSV 1047

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAG 149
                 RG    +    + G  G     G   IR P G
Sbjct: 1048 GPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQG 1084



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 26/88 (29%), Positives = 31/88 (35%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           +G    P  + L    G  G V  PG RGL  + G+ G       R    + G  G    
Sbjct: 546 QGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGP 605

Query: 99  PGVRGLVADPGVRGLAAALMVRGLVAAA 126
            G RG    PG  G      V G V  A
Sbjct: 606 IGSRGPSGPPGPDGNKGEPGVVGAVGTA 633



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 54  PGVRGLVAD---PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           PG  GL+     PG  G     G +G   +P         G RG    PG  G    PG 
Sbjct: 90  PGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGK 149

Query: 111 RG 112
            G
Sbjct: 150 PG 151



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 38/128 (29%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G +  P  +G   DP       D G  GL    G RG     G  G    P  + +    
Sbjct: 490 GNIGFPGPKGPTGDPGKN---GDKGHAGLA---GARGAPGPDGNNGAQGPPGPQGVQGGK 543

Query: 91  GVRGLVADPGVRGL---------VADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGA 141
           G +G    PG +GL         V  PG RGL     + G   A   G R  G   ESGA
Sbjct: 544 GEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPG--PAGPRGER--GPPGESGA 599

Query: 142 RCIRRPAG 149
                P G
Sbjct: 600 AGPTGPIG 607



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 26/92 (28%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
            RG      +RG   +P       + G RGL    G  GL   PG+ G   D      V  
Sbjct: 996  RGPSGPQGIRGDKGEP------GEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGP 1049

Query: 90   PGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
             G RG     G  G     G  G      +RG
Sbjct: 1050 AGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRG 1081


>gi|239757639 PREDICTED: similar to collagen, type I, alpha 2 [Homo
           sapiens]
          Length = 2378

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 18/205 (8%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++   G+     V+G+  +   +G+  +  V+ +  +  V G+  +    G+  + 
Sbjct: 699 GIANEVAAHGISKEDAVQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANED 758

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV------AAA 126
            V+G+  + VV+ +  +  V+G+  +  V+G+  +    G+A  +   G+         A
Sbjct: 759 PVQGVANEDVVQGVANEVEVQGIAHEDAVQGIANEDAAHGIANEVAAHGVANEDAAQGVA 818

Query: 127 LMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGG----------HEMVSASDRC 176
                QG +  ++        A    A E   HG+               H +V+  D  
Sbjct: 819 NEDAAQGVANEDAVHGVANEDAAQGVAKEVTAHGVTNEDAVQGVVNEEALHGVVANEDAA 878

Query: 177 WMDIQP--KHGSQNERIRQVLDSLG 199
               +P   HG  NE +   + + G
Sbjct: 879 QAIAKPDAAHGIANEGVANEVAAQG 903



 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 6/168 (3%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++   G+     V+G+  +   +G+  +   + +  +  V+G+  +  V G+  + 
Sbjct: 1632 GIANEVAAHGISKEDAVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEV 1691

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA---AALMVRGLVAA---A 126
               G+  +  V+ +  +  V+G+  +  V+G+  +  V+G+A   AA  +   VAA   A
Sbjct: 1692 AAHGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGITNEVAAHGIA 1751

Query: 127  LMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                 QG +  ++        A  + A E A HG+        ++  D
Sbjct: 1752 NEDAAQGIAHEDAVQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPD 1799



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 10/181 (5%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++   G+      +G+  +   +G+  +     +  +  V+G+  +   +G+  + 
Sbjct: 672 GIANEVAAHGIANEDAAQGIANEDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIAHED 731

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
            V+G+  +  V  +  +    G+  +  V+G+  +  V+G+A  + V+G+   A     Q
Sbjct: 732 AVQGIANEDAVHGVAKEVAAHGVANEDPVQGVANEDVVQGVANEVEVQGI---AHEDAVQ 788

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDIQPKHGSQNERIR 192
           G +  ++        A    A E A  G+      + V+  D         HG  NE   
Sbjct: 789 GIANEDAAHGIANEVAAHGVANEDAAQGVANEDAAQGVANEDAV-------HGVANEDAA 841

Query: 193 Q 193
           Q
Sbjct: 842 Q 842



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 26/162 (16%), Positives = 66/162 (40%), Gaps = 3/162 (1%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++   G+      +G+  +   +G+  +     +  +  V+G+  +   +G+  + 
Sbjct: 1019 GIANEVAAHGIANEDAAQGIANEDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIANED 1078

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
              +G+  +  V+ +  +  V G+  +    G+  +  V+G+A    V+G+     +   Q
Sbjct: 1079 AAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEV---Q 1135

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G +  ++        A    A E A HG+      + ++  D
Sbjct: 1136 GVAHEDAVQGIANEDAAHGIANEVAAHGIANEDAAQGIANED 1177



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 6/155 (3%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++   G+     V+G+  +   +G+  +   + +  +  V+G+  +  V G+  + 
Sbjct: 1046 GIANEVAAHGISKEDAVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEV 1105

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA---AALMVRGLVAA---A 126
               G+  +  V+ +  +  V+G+  +  V+G+  +  V+G+A   AA  +   VAA   A
Sbjct: 1106 AAHGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGIA 1165

Query: 127  LMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
                 QG +  ++        A    A E A HG+
Sbjct: 1166 NEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGV 1200



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 27/150 (18%), Positives = 60/150 (40%), Gaps = 14/150 (9%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   ++   G+     V+G+  +  V+G+  +  V+ +  +  V+G+  +    G+  + 
Sbjct: 1100 GVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEV 1159

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
               G+  +   + +  +   +G+  +  V+G+  +  V G+A  +   G+          
Sbjct: 1160 AAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVA--------- 1210

Query: 133  GGSRRESGARCIRRP-AGVTAAPETAGHGL 161
                 E  A  I +P A    A E A  G+
Sbjct: 1211 ----NEDAAHAIAKPDAARGIANEVAAQGI 1236



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 26/162 (16%), Positives = 68/162 (41%), Gaps = 3/162 (1%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++  +G+    V  G+  +    G+  +     +  +  V+G+  +   +G+  + 
Sbjct: 1226 GIANEVAAQGIATEDVADGIANEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKED 1285

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             V+G+  +   + +  +  V+G+  +  ++G+  +  V+G+A    V+G+   A      
Sbjct: 1286 AVQGIANEDAAQGIAKEDPVQGVANEDPIQGVANEVEVQGVAHEDAVQGI---ANEDAAH 1342

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G +  ++        A    A E A  G+ +    + ++  D
Sbjct: 1343 GIANEDAAQGIANEDAAQDIANEDAAQGISKEDAVQGIANED 1384



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 5/150 (3%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   +  V+G+      +G+  +  V+G+  +  V+ +  +  V+G+  +  V+G+  + 
Sbjct: 1370 GISKEDAVQGIANEDAAQGIAKEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANED 1429

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
               G+  +     +  +   +G+  +   +G+  +  V+G+A    V G+          
Sbjct: 1430 AAHGIANEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEV----AA 1485

Query: 133  GGSRRESGARCIRRP-AGVTAAPETAGHGL 161
             G   E  A  I +P A    A E A  G+
Sbjct: 1486 HGVANEDAAHAIAKPDAARGIANEVATQGI 1515



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 24/153 (15%), Positives = 58/153 (37%), Gaps = 3/153 (1%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   +  V+G+      +G+  +  V+G+  +   + +  +    G+  +   +G+  + 
Sbjct: 1920 GISKEDAVQGIANQDAAQGIAKEDAVQGIANEDAAQGIANEVAAHGIANEDAAQGIANED 1979

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
              +G+  +  V+ +  +  V G+  +     +      RG+A  +  +G+   A      
Sbjct: 1980 AAQGIAHEDAVQGIANEDAVHGVANEDAAHAIAKPDAARGIANEVAAQGI---ATEDVAD 2036

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHG 165
            G +  ++        A    A   A HG+   G
Sbjct: 2037 GIANEDAAHGVANEDAAQAIAKPDAAHGIANEG 2069



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 27/163 (16%), Positives = 65/163 (39%), Gaps = 4/163 (2%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++  +G+    V  G+  +    G+  +  V  +  +  V+G+  +  V G+  + 
Sbjct: 563 GIANEVATQGIATEDVADGIANEDAAHGVANEVAVHGVAIEDAVQGVANEDAVHGVANED 622

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA-DPGVRGLAAALMVRGLVAAALMGCR 131
             +G+  +     +  +  V+G+V +  + G+VA +   + +A      G+         
Sbjct: 623 AAQGIAKEVTAHGVANEDAVQGVVNEDALHGVVANEDAAQAIAKPDAAHGIANEV---AA 679

Query: 132 QGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G +  ++        A    A E A HG+ +    + ++  D
Sbjct: 680 HGIANEDAAQGIANEDAAQGIANEVAAHGISKEDAVQGIANED 722



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 8/154 (5%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++   +G+      +G+  +  V G+  +   + +  +    G+  +  V+G+V + 
Sbjct: 807 GVANEDAAQGVANEDAAQGVANEDAVHGVANEDAAQGVAKEVTAHGVTNEDAVQGVVNEE 866

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMG--- 129
            + G+VA+    + +A P     +A+ GV   VA    +G+A   +  G+   A  G   
Sbjct: 867 ALHGVVANEDAAQAIAKPDAAHGIANEGVANEVA---AQGIATEDVADGIAKDAAHGITK 923

Query: 130 --CRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
               Q  +++++        A    A E A HG+
Sbjct: 924 EEAAQAIAKQDAAHSITNEDAAQGVANEDAAHGV 957



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 28/168 (16%), Positives = 71/168 (42%), Gaps = 6/168 (3%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   +G+     V+G+  +  ++G+  +  V+ +  +  V+G+  +    G+  + 
Sbjct: 1289 GIANEDAAQGIAKEDPVQGVANEDPIQGVANEVEVQGVAHEDAVQGIANEDAAHGIANED 1348

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV-AAALMGCR 131
              +G+  +   + +  +   +G+  +  V+G+  +   +G+A    V+G+    A+ G  
Sbjct: 1349 AAQGIANEDAAQDIANEDAAQGISKEDAVQGIANEDAAQGIAKEDPVQGVANEDAVQGVA 1408

Query: 132  -----QGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                 QG +  ++        A    A E A HG+      + ++  D
Sbjct: 1409 NEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGIANEDAAQGIANED 1456



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 30/155 (19%), Positives = 64/155 (41%), Gaps = 6/155 (3%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G   +  V+G+      +G+  +  V+G+  +  V+ +  +  V+G+  +  V+G+  + 
Sbjct: 193 GISKEDAVQGIANEDAAQGIAKEDPVQGVANEDPVQGVANEDAVQGVANEVEVQGVAHED 252

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL-----VAAAL 127
            V+G+  +     +  +    G+  +   +G+  +   +G+A    V+G+     V    
Sbjct: 253 AVQGIANEDAAHGITNEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVA 312

Query: 128 MGCRQGGSRRESGARCIRRP-AGVTAAPETAGHGL 161
                 G   E  A  I +P A    A E A  G+
Sbjct: 313 KEVAAHGVANEDAAHAIAKPDAAHGIANEVATQGI 347



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 27/162 (16%), Positives = 67/162 (41%), Gaps = 3/162 (1%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   +G+      +G+  +    G+  +  V+ +  +   +G+  +   +G+  + 
Sbjct: 1028 GIANEDAAQGIANEDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIANEDAAQGIAHED 1087

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             V+G+  +  V  +  +    G+  +  V+G+  +  V+G+A  + V+G+   A     Q
Sbjct: 1088 AVQGIANEDAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEVQGV---AHEDAVQ 1144

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G +  ++        A    A E A  G+      + ++  D
Sbjct: 1145 GIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIAHED 1186



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/102 (16%), Positives = 48/102 (47%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG+      +G+  + V  G+  +     +  +    G+  +  V+G+  +   +G+  +
Sbjct: 1225 RGIANEVAAQGIATEDVADGIANEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKE 1284

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              V+ +  +   +G+  +  V+G+  +  ++G+A  + V+G+
Sbjct: 1285 DAVQGIANEDAAQGIAKEDPVQGVANEDPIQGVANEVEVQGV 1326



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/110 (14%), Positives = 51/110 (46%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++  +G+     V+G+  +  V+G+  +  V+ +  +    G+  +   +G+  + 
Sbjct: 112 GVANEVAAQGVANEDAVQGVANEDAVQGVANEDAVQGIANEDAAHGIANEDAAQGIANED 171

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
             + +  +   + +  +   +G+  +  V+G+  +   +G+A    V+G+
Sbjct: 172 AAQDIAKEDAAQDIANEDAAQGISKEDAVQGIANEDAAQGIAKEDPVQGV 221



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 30/177 (16%), Positives = 69/177 (38%), Gaps = 10/177 (5%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   +  V+G+      +G+  +  ++G+  +  V+ +  +  V+G+  +    G+  + 
Sbjct: 1839 GISKEDAVQGIANEDAAQGIAKEDPIQGVANEVEVQGVAHEDAVQGIANEDAAHGIANED 1898

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
              +G+  +   + +  +   +G+  +  V+G+      +G+A    V+G+   A     Q
Sbjct: 1899 AAQGIANEDAAQDIANEDAAQGISKEDAVQGIANQDAAQGIAKEDAVQGI---ANEDAAQ 1955

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDIQPKHGSQNE 189
            G +   +        A    A E A  G+      + ++  D         HG  NE
Sbjct: 1956 GIANEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAV-------HGVANE 2005



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 26/162 (16%), Positives = 68/162 (41%), Gaps = 3/162 (1%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++  V+G+       G+  +   +G+  +   + +  +   + +  +   +G+  + 
Sbjct: 139 GVANEDAVQGIANEDAAHGIANEDAAQGIANEDAAQDIAKEDAAQDIANEDAAQGISKED 198

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
            V+G+  +   + +  +  V+G+  +  V+G+  +  V+G+A  + V+G+   A     Q
Sbjct: 199 AVQGIANEDAAQGIAKEDPVQGVANEDPVQGVANEDAVQGVANEVEVQGV---AHEDAVQ 255

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
           G +  ++        A    A E A  G+      + ++  D
Sbjct: 256 GIANEDAAHGITNEVAAHGIANEDAAQGIANEDAAQGIAHED 297



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 17/102 (16%), Positives = 48/102 (47%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G+      +G+  +    G+  +  V+ +  +   +G+  +   +G+  +  V+G+  +
Sbjct: 1622 QGIANQDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANE 1681

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              V  +  +    G+  +  V+G+  +  V+G+A  + V+G+
Sbjct: 1682 DAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEVQGV 1723



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 5/150 (3%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++   G+     V+G+  +   +G+  +   + +  +  V+G+  +  V G+  + 
Sbjct: 428 GIANEVAAHGISKEDAVQGIANEDAAQGIAHEDAAQGIAHEDAVQGIANEDAVHGVAKEV 487

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
              G+        +      RG+  +   +G+  +    G+A    V G+          
Sbjct: 488 AAHGVANKDAAHAIAKPDAARGIANEVAAQGIATEDVADGIANEDAVHGVANEV----AA 543

Query: 133 GGSRRESGARCIRRP-AGVTAAPETAGHGL 161
            G   E  A  I +P A    A E A  G+
Sbjct: 544 HGVANEDAAHAIAKPDAAHGIANEVATQGI 573



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 12/162 (7%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++  V+G+     V+G+  +  V+G+  +     +  +    G+  +   +G+  + 
Sbjct: 1704 GVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGITNEVAAHGIANEDAAQGIAHED 1763

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             V+G+  +  V  +  +    G+  +     +      RG+A  +  +G+    +     
Sbjct: 1764 AVQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDV----A 1819

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
             G   E  A  +        A E A HG+ +    + ++  D
Sbjct: 1820 DGIPNEDAAHGV--------ANEVAAHGISKEDAVQGIANED 1853



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 24/162 (14%), Positives = 63/162 (38%), Gaps = 3/162 (1%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++    +      +G+      +G+  +     +  +  V+G+  +   +G+  + 
Sbjct: 1605 GIANEVAAHSIANKDAAQGIANQDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIANED 1664

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
              +G+  +  V+ +  +  V G+  +    G+  +  V+G+A    V+G+     +   Q
Sbjct: 1665 AAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEV---Q 1721

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G +  ++        A      E A HG+      + ++  D
Sbjct: 1722 GVAHEDAVQGIANEDAAHGITNEVAAHGIANEDAAQGIAHED 1763



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 23/162 (14%), Positives = 64/162 (39%), Gaps = 12/162 (7%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++   G+     V+G+  +   +G+  +  ++ +  +  V+G+  +  V+G+  + 
Sbjct: 1830 GVANEVAAHGISKEDAVQGIANEDAAQGIAKEDPIQGVANEVEVQGVAHEDAVQGIANED 1889

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
               G+  +   + +  +   + +  +   +G+  +  V+G+A                 Q
Sbjct: 1890 AAHGIANEDAAQGIANEDAAQDIANEDAAQGISKEDAVQGIAN------------QDAAQ 1937

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G ++ ++        A    A E A HG+      + ++  D
Sbjct: 1938 GIAKEDAVQGIANEDAAQGIANEVAAHGIANEDAAQGIANED 1979



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 14/103 (13%), Positives = 44/103 (42%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G+       G+  +    G+  +   + +  +   +G+  +    G+  +  V+G+  
Sbjct: 1008 IQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIANEVAAHGISKEDAVQGIAN 1067

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            +   + +  +   +G+  +  V+G+  +  V G+A  +   G+
Sbjct: 1068 EDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGV 1110



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 26/168 (15%), Positives = 68/168 (40%), Gaps = 6/168 (3%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++  V+G+     V+G+  +  V+G+  +     +  +   +G+  +   + +  + 
Sbjct: 121 GVANEDAVQGVANEDAVQGVANEDAVQGIANEDAAHGIANEDAAQGIANEDAAQDIAKED 180

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV-AAALMGCR 131
             + +  +   + +  +  V+G+  +   +G+  +  V+G+A    V+G+    A+ G  
Sbjct: 181 AAQDIANEDAAQGISKEDAVQGIANEDAAQGIAKEDPVQGVANEDPVQGVANEDAVQGVA 240

Query: 132 -----QGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                QG +  ++        A      E A HG+      + ++  D
Sbjct: 241 NEVEVQGVAHEDAVQGIANEDAAHGITNEVAAHGIANEDAAQGIANED 288



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 26/150 (17%), Positives = 56/150 (37%), Gaps = 13/150 (8%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++   +G+     V+G+  +  V G+  +     +  +     +       G+  + 
Sbjct: 283 GIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAAHGIANEV 342

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             +G+  + V   +  +    G+  +    G+  +  V+G+     + G+VA        
Sbjct: 343 ATQGIATEDVADGIANEDAAHGVAKEVTAHGVANEDAVQGVVNEDALHGVVA-------- 394

Query: 133 GGSRRESGARCIRRP-AGVTAAPETAGHGL 161
                E  A+ I +P A    A E A HG+
Sbjct: 395 ----NEDAAQAIAKPDAAHGIANEVAAHGI 420



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 15/102 (14%), Positives = 46/102 (45%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++  +G+    V  G+  +    G+  +     +  +  V+G+  +   +G+  + 
Sbjct: 1803 GIANEVAAQGIATEDVADGIPNEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKED 1862

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
             ++G+  +  V+ +  +  V+G+  +    G+  +   +G+A
Sbjct: 1863 PIQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEDAAQGIA 1904



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 18/111 (16%), Positives = 45/111 (40%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   +G+     V+G+  +  V G+  +     +  +     +      RG+  + 
Sbjct: 1451 GIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARGIANEV 1510

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV 123
              +G+  + V   +  +    G+  +   +G+  +  V G+A    V+G+V
Sbjct: 1511 ATQGIATEDVADGIANEDAAHGVANEVAAQGIANEVAVHGVAIEDAVQGVV 1561



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 15/110 (13%), Positives = 44/110 (40%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++   G+      +G+  +    G+  +  V+ +  +   +G+  +   +G+  + 
Sbjct: 410 GIANEVAAHGIANEDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIAHEDAAQGIAHED 469

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            V+G+  +  V  +  +    G+        +      RG+A  +  +G+
Sbjct: 470 AVQGIANEDAVHGVAKEVAAHGVANKDAAHAIAKPDAARGIANEVAAQGI 519



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 31/183 (16%), Positives = 69/183 (37%), Gaps = 13/183 (7%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++    G+      +G+  +   +G+  +  V  +  +  V+G+  +  V+G+    
Sbjct: 947  GVANEDAAHGVANEDAAQGVANEVAAQGVANEDAVHGVANEDAVQGVANEVEVQGIAHKD 1006

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAA-ALMG-- 129
             ++G+  +     +  +    G+  +   +G+  +   +G+A  +   G+    A+ G  
Sbjct: 1007 AIQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIANEVAAHGISKEDAVQGIA 1066

Query: 130  ---CRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDIQPKHGS 186
                 QG +  ++        A    A E A HG+ +      V+  D       P  G 
Sbjct: 1067 NEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANED-------PVQGV 1119

Query: 187  QNE 189
             NE
Sbjct: 1120 ANE 1122



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 25/155 (16%), Positives = 62/155 (40%), Gaps = 4/155 (2%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG+      +G+  + V  G+  +     +  +   +G+  +  V G+  +  V+G+V +
Sbjct: 1504 RGIANEVATQGIATEDVADGIANEDAAHGVANEVAAQGIANEVAVHGVAIEDAVQGVVKE 1563

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVA-DPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
                 +  +  V+G+V +  +  +VA +   + +A      G+            + +++
Sbjct: 1564 VTAHGVANEDAVQGVVNEDALHSVVANEDAAQAIAKPDAAHGIANEV---AAHSIANKDA 1620

Query: 140  GARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                  + A    A E A HG+ +    + ++  D
Sbjct: 1621 AQGIANQDAAQGIANEVAAHGISKEDAVQGIANED 1655



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++  V G+       G+  +     +      R +  +   +G+  +    G+  + 
Sbjct: 1469 GIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARGIANEVATQGIATEDVADGIANED 1528

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
               G+  +   + +  +  V G+  +  V+G+V +    G+A    V+G+V    +    
Sbjct: 1529 AAHGVANEVAAQGIANEVAVHGVAIEDAVQGVVKEVTAHGVANEDAVQGVVNEDAL---H 1585

Query: 133  GGSRRESGARCIRRP-AGVTAAPETAGHGL 161
                 E  A+ I +P A    A E A H +
Sbjct: 1586 SVVANEDAAQAIAKPDAAHGIANEVAAHSI 1615



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 22/155 (14%), Positives = 61/155 (39%), Gaps = 6/155 (3%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++  +G+       G+  +    G+  +   + +  +   +G+  +  V+G+  + 
Sbjct: 2113 GVTNEVAAQGVANEDAAHGVANEVAAHGVANEDAAQGVANEVAAQGVANEDAVQGVANEV 2172

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV------AAA 126
             V+G+     ++ +  +   +G+  +    G+  +   +G+A  +  +G+         A
Sbjct: 2173 EVQGIAHKDAIQGIANEDAAQGVANEVAAHGVANEDAAQGVANEVAAQGVANEDAAQGVA 2232

Query: 127  LMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
                  G +  ++     +  A    A E A HG+
Sbjct: 2233 NEVAVHGVANEDAARHMAKEDAAQGIANEDAAHGI 2267



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 16/178 (8%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++ V  G+     V G+  +    G+  +     +       G+  +   +G+  + 
Sbjct: 518 GIATEDVADGIANEDAVHGVANEVAAHGVANEDAAHAIAKPDAAHGIANEVATQGIATED 577

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAA------- 125
              G+  +     +  +  V G+  +  V+G+  +  V G+A     +G+          
Sbjct: 578 VADGIANEDAAHGVANEVAVHGVAIEDAVQGVANEDAVHGVANEDAAQGIAKEVTAHGVA 637

Query: 126 ---ALMG-----CRQGGSRRESGARCIRRP-AGVTAAPETAGHGLWRHGGHEMVSASD 174
              A+ G        G    E  A+ I +P A    A E A HG+      + ++  D
Sbjct: 638 NEDAVQGVVNEDALHGVVANEDAAQAIAKPDAAHGIANEVAAHGIANEDAAQGIANED 695



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 16/103 (15%), Positives = 41/103 (39%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+     V G+  +    G+  +     +      RG+  +   +G+  +    G+  
Sbjct: 1188 VQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDVADGIAN 1247

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            +     +  +    G+  +  V+G+  +   +G+A    V+G+
Sbjct: 1248 EDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKEDAVQGI 1290



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 16/110 (14%), Positives = 50/110 (45%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   +  V+G+      +G+  +  V+G+  +  ++ +  +  V+G+  +  V+G+  + 
Sbjct: 1280 GIAKEDAVQGIANEDAAQGIAKEDPVQGVANEDPIQGVANEVEVQGVAHEDAVQGIANED 1339

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
               G+  +   + +  +   + +  +   +G+  +  V+G+A     +G+
Sbjct: 1340 AAHGIANEDAAQGIANEDAAQDIANEDAAQGISKEDAVQGIANEDAAQGI 1389



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 25/139 (17%), Positives = 60/139 (43%), Gaps = 4/139 (2%)

Query: 24   VANS-VVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPV 82
            +AN    +G+  +  V+G+  +   + +  +  V+G+  +  V+G+  +  V+G+  +  
Sbjct: 1362 IANEDAAQGISKEDAVQGIANEDAAQGIAKEDPVQGVANEDAVQGVANEVEVQGVAHEDA 1421

Query: 83   VRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGAR 142
            V+ +  +    G+  +    G+  +   +G+A     +G+   A     QG +  ++   
Sbjct: 1422 VQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGI---AHEDAVQGIANEDAVHG 1478

Query: 143  CIRRPAGVTAAPETAGHGL 161
              +  A    A E A H +
Sbjct: 1479 VAKEVAAHGVANEDAAHAI 1497



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 16/102 (15%), Positives = 45/102 (44%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG+      +G+  + V  G+  +     +  +    G+  +  V+G+  +   +G+  +
Sbjct: 1802 RGIANEVAAQGIATEDVADGIPNEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKE 1861

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              ++ +  +  V+G+  +  V+G+  +    G+A     +G+
Sbjct: 1862 DPIQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEDAAQGI 1903



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 33/207 (15%), Positives = 74/207 (35%), Gaps = 6/207 (2%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+      +G+  +   +G+  +     +  +    G+  +   +G+  +   +G+  + 
Sbjct: 2104 GITKEDAAQGVTNEVAAQGVANEDAAHGVANEVAAHGVANEDAAQGVANEVAAQGVANED 2163

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGA 141
             V+ +  +  V+G+     ++G+  +   +G+A  +   G+   A     QG +   +  
Sbjct: 2164 AVQGVANEVEVQGIAHKDAIQGIANEDAAQGVANEVAAHGV---ANEDAAQGVANEVAAQ 2220

Query: 142  RCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCW--MDIQPKHGSQNE-RIRQVLDSL 198
                  A    A E A HG+        ++  D      +    HG  NE  +  + +  
Sbjct: 2221 GVANEDAAQGVANEVAVHGVANEDAARHMAKEDAAQGIANEDAAHGIANEDAVHGIANED 2280

Query: 199  GKISSCSSQAAGRLDAVLRATITERSP 225
                  +    G L   L  T   R+P
Sbjct: 2281 AVYDIANDTVQGTLTRTLYRTSLMRTP 2307



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 24/149 (16%), Positives = 58/149 (38%), Gaps = 4/149 (2%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++  +G+    V  G+  D    G+  +   + +        +  +   +G+  + 
Sbjct: 894  GVANEVAAQGIATEDVADGIAKD-AAHGITKEEAAQAIAKQDAAHSITNEDAAQGVANED 952

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
               G+  +   + +  +   +G+  +  V G+  +  V+G+A  + V+G+   A     Q
Sbjct: 953  AAHGVANEDAAQGVANEVAAQGVANEDAVHGVANEDAVQGVANEVEVQGI---AHKDAIQ 1009

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGL 161
            G +  ++        A    A E A  G+
Sbjct: 1010 GIANEDAAHGIANEVAAHGIANEDAAQGI 1038



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 24   VANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV 83
            +A   V   +A+  V+G+  +   + +       G+  +   +G+  +   +G+  +   
Sbjct: 2070 IATEDVADGIAEDAVQGITNEEAAQAIAKQDAAHGITKEDAAQGVTNEVAAQGVANEDAA 2129

Query: 84   RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARC 143
              +  +    G+  +   +G+  +   +G+A    V+G+     +   QG + +++    
Sbjct: 2130 HGVANEVAAHGVANEDAAQGVANEVAAQGVANEDAVQGVANEVEV---QGIAHKDAIQGI 2186

Query: 144  IRRPAGVTAAPETAGHGL 161
                A    A E A HG+
Sbjct: 2187 ANEDAAQGVANEVAAHGV 2204



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 15/101 (14%), Positives = 44/101 (43%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G+     V+G+  +   +G+  +     +  +    G+  +   +G+  +   +G+  + 
Sbjct: 67  GITNEDAVQGVANEVAAQGVANEDAAHGVANEVAAHGVANEDAAQGVANEVAAQGVANED 126

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            V+ +  +  V+G+  +  V+G+  +    G+A     +G+
Sbjct: 127 AVQGVANEDAVQGVANEDAVQGIANEDAAHGIANEDAAQGI 167



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 14/95 (14%), Positives = 42/95 (44%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           V+G+      +G+  +    G+  +     +  +   +G+  +   +G+  +  V+G+  
Sbjct: 74  VQGVANEVAAQGVANEDAAHGVANEVAAHGVANEDAAQGVANEVAAQGVANEDAVQGVAN 133

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           +  V+ +  +  V+G+  +    G+  +   +G+A
Sbjct: 134 EDAVQGVANEDAVQGIANEDAAHGIANEDAAQGIA 168



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 13/110 (11%), Positives = 48/110 (43%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++   G+      +G+  +   +G+  +  V+ +  +  V+G+  +  V+G+  + 
Sbjct: 94  GVANEVAAHGVANEDAAQGVANEVAAQGVANEDAVQGVANEDAVQGVANEDAVQGIANED 153

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              G+  +   + +  +   + +  +   + +  +   +G++    V+G+
Sbjct: 154 AAHGIANEDAAQGIANEDAAQDIAKEDAAQDIANEDAAQGISKEDAVQGI 203



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 22/157 (14%), Positives = 58/157 (36%), Gaps = 6/157 (3%)

Query: 24   VANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV 83
            +A     G+  +   + +        +  +   +G+  +    G+  +   +G+  +   
Sbjct: 913  IAKDAAHGITKEEAAQAIAKQDAAHSITNEDAAQGVANEDAAHGVANEDAAQGVANEVAA 972

Query: 84   RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV------AAALMGCRQGGSRR 137
            + +  +  V G+  +  V+G+  +  V+G+A    ++G+         A      G +  
Sbjct: 973  QGVANEDAVHGVANEDAVQGVANEVEVQGIAHKDAIQGIANEDAAHGIANEVAAHGIANE 1032

Query: 138  ESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            ++        A    A E A HG+ +    + ++  D
Sbjct: 1033 DAAQGIANEDAAQGIANEVAAHGISKEDAVQGIANED 1069



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 16/110 (14%), Positives = 43/110 (39%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   +G+     V+G+  +  V G+  +     +  +     +      RG+  + 
Sbjct: 1172 GIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARGIANEV 1231

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              +G+  + V   +  +    G+  +    G+  +  V+G+A     +G+
Sbjct: 1232 AAQGIATEDVADGIANEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGI 1281



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 15/110 (13%), Positives = 43/110 (39%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   ++   G+        +      RG+  +   + +  +    G+  +    G+  + 
Sbjct: 1199 GVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDVADGIANEDAAHGVANEV 1258

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
               G+  +  V+ +  +   +G+  +  V+G+  +   +G+A    V+G+
Sbjct: 1259 AAHGISKEDAVQGIANEDAAQGIAKEDAVQGIANEDAAQGIAKEDPVQGV 1308



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 13/102 (12%), Positives = 44/102 (43%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++  +G+       G+  +    G+  +   + +  +   +G+  +  V+G+  + 
Sbjct: 76  GVANEVAAQGVANEDAAHGVANEVAAHGVANEDAAQGVANEVAAQGVANEDAVQGVANED 135

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            V+G+  +  V+ +  +    G+  +   +G+  +   + +A
Sbjct: 136 AVQGVANEDAVQGIANEDAAHGIANEDAAQGIANEDAAQDIA 177



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 17/170 (10%)

Query: 24   VANSVV-RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPV 82
            +AN V   G+  +   +G+  +   + +  +  V+G+  +  V G+  +    G+  +  
Sbjct: 1155 IANEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDA 1214

Query: 83   VRRLVADPGVRGLVADPGVRGLVADPGVRGLA---AALMVRGLVAAALMGCRQGGSRRES 139
               +      RG+  +   +G+  +    G+A   AA  V   VAA       G S+ ++
Sbjct: 1215 AHAIAKPDAARGIANEVAAQGIATEDVADGIANEDAAHGVANEVAA------HGISKEDA 1268

Query: 140  GARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDIQPKHGSQNE 189
                    A    A E A  G+      + ++  D       P  G  NE
Sbjct: 1269 VQGIANEDAAQGIAKEDAVQGIANEDAAQGIAKED-------PVQGVANE 1311



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G   ++   G+     V+G+V +  + G+VA+    + +A P            G+  + 
Sbjct: 364 GVAKEVTAHGVANEDAVQGVVNEDALHGVVANEDAAQAIAKPDA--------AHGIANEV 415

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              G+  +   + +  +    G+  +  V+G+  +   +G+A     +G+
Sbjct: 416 AAHGIANEDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIAHEDAAQGI 465



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 21/141 (14%), Positives = 54/141 (38%), Gaps = 3/141 (2%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G+       G+  +   +G+  +   + +  +  V G+  +  V+G+  +  V+G+   
Sbjct: 946  QGVANEDAAHGVANEDAAQGVANEVAAQGVANEDAVHGVANEDAVQGVANEVEVQGIAHK 1005

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESG 140
              ++ +  +    G+  +    G+  +   +G+A     +G+          G S+ ++ 
Sbjct: 1006 DAIQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIANEV---AAHGISKEDAV 1062

Query: 141  ARCIRRPAGVTAAPETAGHGL 161
                   A    A E A  G+
Sbjct: 1063 QGIANEDAAQGIANEDAAQGI 1083



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 14/103 (13%), Positives = 40/103 (38%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+       G+  +    G+  +   + +  +   +G+  +  V+G+  +  V G+  
Sbjct: 1143 VQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAK 1202

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            +     +  +     +      RG+  +   +G+A   +  G+
Sbjct: 1203 EVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDVADGI 1245



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 14/103 (13%), Positives = 40/103 (38%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+       G+  +    G+  +   + +  +   +G+  +  V+G+  +  V G+  
Sbjct: 1422 VQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAK 1481

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            +     +  +     +      RG+  +   +G+A   +  G+
Sbjct: 1482 EVAAHGVANEDAAHAIAKPDAARGIANEVATQGIATEDVADGI 1524



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 15/110 (13%), Positives = 43/110 (39%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   +G+      +G+  +  V+G+  +  V  +  +    G+  +     +    
Sbjct: 1442 GIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPD 1501

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              RG+  +   + +  +    G+  +    G+  +   +G+A  + V G+
Sbjct: 1502 AARGIANEVATQGIATEDVADGIANEDAAHGVANEVAAQGIANEVAVHGV 1551



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 21/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 24   VANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV 83
            +A   V+G+  +   + +        +  +   +G+  +   +G+  +    G+  +   
Sbjct: 2079 IAEDAVQGITNEEAAQAIAKQDAAHGITKEDAAQGVTNEVAAQGVANEDAAHGVANEVAA 2138

Query: 84   RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARC 143
              +  +   +G+  +   +G+  +  V+G+A  + V+G+   A     QG +  ++    
Sbjct: 2139 HGVANEDAAQGVANEVAAQGVANEDAVQGVANEVEVQGI---AHKDAIQGIANEDAAQGV 2195

Query: 144  IRRPAGVTAAPETAGHGL 161
                A    A E A  G+
Sbjct: 2196 ANEVAAHGVANEDAAQGV 2213



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 24   VANSVV-RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPV 82
            +AN V   G+  +   +G+  +   + +  +  V+G+  +  V G+  +    G+  +  
Sbjct: 1434 IANEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDA 1493

Query: 83   VRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
               +      RG+  +   +G+  +    G+A
Sbjct: 1494 AHAIAKPDAARGIANEVATQGIATEDVADGIA 1525



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 15/110 (13%), Positives = 42/110 (38%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++  V G+       G+  +     +      R +  +   +G+  +    G+  + 
Sbjct: 1190 GIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDVADGIANED 1249

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
               G+  +     +  +  V+G+  +   +G+  +  V+G+A     +G+
Sbjct: 1250 AAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKEDAVQGIANEDAAQGI 1299



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGL--------VADPVVRRLVADPGVRGLVADP-GVRGLVAD 71
           RG+      +G+  + V  G+        VA+ V    VA+      +A P    G+  +
Sbjct: 508 RGIANEVAAQGIATEDVADGIANEDAVHGVANEVAAHGVANEDAAHAIAKPDAAHGIANE 567

Query: 72  PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              +G+  + V   +  +    G+  +  V G+  +  V+G+A    V G+
Sbjct: 568 VATQGIATEDVADGIANEDAAHGVANEVAVHGVAIEDAVQGVANEDAVHGV 618



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGL--------VADP- 63
            G  +++   G+      +G+  +  V+G+  +  V  +  +    G+        +A P 
Sbjct: 1740 GITNEVAAHGIANEDAAQGIAHEDAVQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPD 1799

Query: 64   GVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV 123
              RG+  +   +G+  + V   +  +    G+  +    G+  +  V+G+A     +G+ 
Sbjct: 1800 AARGIANEVAAQGIATEDVADGIPNEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIA 1859

Query: 124  AAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                +   QG +            A    A E A HG+      + ++  D
Sbjct: 1860 KEDPI---QGVANEVEVQGVAHEDAVQGIANEDAAHGIANEDAAQGIANED 1907



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 22/155 (14%), Positives = 56/155 (36%), Gaps = 3/155 (1%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+     V  +  +    G+  +     +      RG+  +   +G+  +    G+  
Sbjct: 1765 VQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDVADGIPN 1824

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
            +     +  +    G+  +  V+G+  +   +G+A    ++G+     +   QG +  ++
Sbjct: 1825 EDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKEDPIQGVANEVEV---QGVAHEDA 1881

Query: 140  GARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                    A    A E A  G+      + ++  D
Sbjct: 1882 VQGIANEDAAHGIANEDAAQGIANEDAAQDIANED 1916



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 21/142 (14%), Positives = 54/142 (38%), Gaps = 3/142 (2%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+      + +       G+  +   + +  +   +G+  +    G+  +    G+  
Sbjct: 2084 VQGITNEEAAQAIAKQDAAHGITKEDAAQGVTNEVAAQGVANEDAAHGVANEVAAHGVAN 2143

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
            +   + +  +   +G+  +  V+G+  +  V+G+A    ++G+   A     QG +   +
Sbjct: 2144 EDAAQGVANEVAAQGVANEDAVQGVANEVEVQGIAHKDAIQGI---ANEDAAQGVANEVA 2200

Query: 140  GARCIRRPAGVTAAPETAGHGL 161
                    A    A E A  G+
Sbjct: 2201 AHGVANEDAAQGVANEVAAQGV 2222



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/110 (12%), Positives = 42/110 (38%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   +G+      +G+  +  V+G+  +  V  +  +    G+  +     +    
Sbjct: 1163 GIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPD 1222

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              RG+  +   + +  +    G+  +    G+  +    G++    V+G+
Sbjct: 1223 AARGIANEVAAQGIATEDVADGIANEDAAHGVANEVAAHGISKEDAVQGI 1272


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 43/137 (31%), Positives = 52/137 (37%), Gaps = 13/137 (9%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLVADPGVRGLVADPVVRR 85
           V G+  D    GL   P V      PG RGL      PG  G   +PG  G    P V  
Sbjct: 389 VPGIRGDQGPSGLAGKPGV------PGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAG 442

Query: 86  LVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVA----AALMGCRQGGSRRESGA 141
            +   G  GL   PG+RG    PG++G A  +  +GL        L G    G   E G 
Sbjct: 443 ALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGT 502

Query: 142 RCIRRPAGVTAAPETAG 158
                P GV  +P   G
Sbjct: 503 AGPTGPPGVPGSPGITG 519



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD- 89
           G    P + G V  P    L  +PG+RG   D G+RG    PG+ G     +  +  A  
Sbjct: 123 GKAGPPGLPGKVGPPGQPGLRGEPGIRG---DQGLRGPPGPPGLPGPSGITIPGKPGAQG 179

Query: 90  -PGVRGLVADPGVRGLVADPGVRGL 113
            PG  G   +PG +G    PG RGL
Sbjct: 180 VPGPPGFQGEPGPQGEPGPPGDRGL 204



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 34/97 (35%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG+ GL   PG +G    PGV G   +P        PGV G V  PG  GL    G  G 
Sbjct: 239 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG-VGVPGAAGLPGPQGPSGA 297

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
                 RG     L+G    G     G +  R PAGV
Sbjct: 298 KGEPGTRG--PPGLIGPTGYGMPGLPGPKGDRGPAGV 332



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 40/123 (32%), Positives = 48/123 (39%), Gaps = 7/123 (5%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV---RRL 86
           +G+   P + G    P  R      G  G    PGV G+  D G  GL   P V   R L
Sbjct: 354 QGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGL 413

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
               G  G     G  G    PG  G+A AL  +G     L G  Q G R  SG   ++ 
Sbjct: 414 PGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKG--DLGLPG--QPGLRGPSGIPGLQG 469

Query: 147 PAG 149
           PAG
Sbjct: 470 PAG 472



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 27/83 (32%), Positives = 33/83 (39%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P + G   +P       + G +GL   PG+ G    PG RG             
Sbjct: 327 RGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGP 386

Query: 90  PGVRGLVADPGVRGLVADPGVRG 112
           PGV G+  D G  GL   PGV G
Sbjct: 387 PGVPGIRGDQGPSGLAGKPGVPG 409



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 35/103 (33%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGV--RGLVADPGVRGLVADPGVR 111
           PG  G    PG  G   +PG +G    P  R L  D GV   GL   PG  G    PG+ 
Sbjct: 172 PGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLP 231

Query: 112 GLAAALMVRGLVAAALMGCRQG-GSRRESGARCIRRPAGVTAA 153
           G A      GL    L G     G + ESG   +  P G   A
Sbjct: 232 GPA------GLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGA 268



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P + GL   P  +     PGV G   +PG  G    PGV G          V  PG  GL
Sbjct: 239 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG----------VGVPGAAGL 288

Query: 96  VADPGVRGLVADPGVRG 112
               G  G   +PG RG
Sbjct: 289 PGPQGPSGAKGEPGTRG 305



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 24/69 (34%), Positives = 29/69 (42%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G   + G +GL   PG+ G    P  R      G  G    PGV G+  D G  G
Sbjct: 341 EPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSG 400

Query: 113 LAAALMVRG 121
           LA    V G
Sbjct: 401 LAGKPGVPG 409



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRL---VADPGVRGLVADPGV-----RGLVAD 71
           V G +      G+   P +RG    P ++     +   G+ GL  +PG+      G   +
Sbjct: 440 VAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGE 499

Query: 72  PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV---RGLAAALMVRGLVAAALM 128
           PG  G    P V      PG+ G    PG  G    PG     G+A   +  G V  A++
Sbjct: 500 PGTAGPTGPPGV---PGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVL 556

Query: 129 G 129
           G
Sbjct: 557 G 557



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 53  DPGVRGLVADPGVRGLVADPGV--RGLVADPVVRRLVADPGVRGL--VADPGVRGLVADP 108
           +PG +G    PG RGL  D GV   GL   P        PG+ G   +  PG+ GL   P
Sbjct: 189 EPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAP 248

Query: 109 GVRG 112
           G +G
Sbjct: 249 GDKG 252



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 16/105 (15%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G     GV GL+ D G  G   +P       + G +GL   PG+ G    PG RG 
Sbjct: 321 PGPKGDRGPAGVPGLLGDRGEPGEDGEP------GEQGPQGLGGPPGLPGSAGLPGRRGP 374

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                  G           GG     G R  + P+G+   P   G
Sbjct: 375 PGPKGEAG----------PGGPPGVPGIRGDQGPSGLAGKPGVPG 409



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 20/112 (17%)

Query: 54  PGVRGLVADPGVRGL--VADPGVRGLVADPVVRRLVADPGVR--GLVADPGVRGLVADPG 109
           PG RG    PG  G   +  PG+ G             PG    G    PG+ G V  PG
Sbjct: 85  PGPRGPPGPPGFPGKPGMGKPGLHGQPGP------AGPPGFSRMGKAGPPGLPGKVGPPG 138

Query: 110 VRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
             GL     +RG            G R   G   +  P+G+T   +    G+
Sbjct: 139 QPGLRGEPGIRG----------DQGLRGPPGPPGLPGPSGITIPGKPGAQGV 180


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRG------LVADPVVRRLVADPGVRGLVADPGVRGLVA 106
           +PG RGLV  PG RG   +PG RG       V     +     PGV+G   +PG +G   
Sbjct: 817 EPGPRGLVGPPGSRG---NPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAG 873

Query: 107 DPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            PG +GLA +    G            G     G R  + P G T  P +AG
Sbjct: 874 SPGPQGLAGSPGPHG----------PNGVPGLKGGRGTQGPPGATGFPGSAG 915



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 9/88 (10%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRG------LVADPGVRGLVADPGVRGLVADPVVR 84
           G   +P  RGLV  P  R    +PG RG       V   G +G    PGV+G   +P  +
Sbjct: 813 GEKGEPGPRGLVGPPGSR---GNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQK 869

Query: 85  RLVADPGVRGLVADPGVRGLVADPGVRG 112
                PG +GL   PG  G    PG++G
Sbjct: 870 GDAGSPGPQGLAGSPGPHGPNGVPGLKG 897



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 42/134 (31%), Positives = 51/134 (38%), Gaps = 11/134 (8%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG   DP   G V  P        PG RG     G+ G     G RG V     +    D
Sbjct: 503 RGPRGDP---GTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGD 559

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GSRRESGARCI 144
           PG  G    PG RGL  +PGV+G    L   G + A     R G     G R + G+  +
Sbjct: 560 PGRPGEPGLPGARGLTGNPGVQGPEGKL---GPLGAPGEDGRPGPPGSIGIRGQPGSMGL 616

Query: 145 RRPAGVTAAPETAG 158
             P G +  P   G
Sbjct: 617 PGPKGSSGDPGKPG 630



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 34/102 (33%), Positives = 42/102 (41%), Gaps = 9/102 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVR------GLVADPGVRGLVADPGV 74
           RG V +S  +G   DP   G    P  R L  +PGV+      G +  PG  G    PG 
Sbjct: 545 RGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGS 604

Query: 75  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAA 116
            G+   P    L   PG +G   DPG  G   + GV G   A
Sbjct: 605 IGIRGQPGSMGL---PGPKGSSGDPGKPGEAGNAGVPGQRGA 643



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 31/105 (29%), Positives = 38/105 (36%), Gaps = 13/105 (12%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G   D G  GL   PG RG+   P         G RG + + G  G   + G RGL
Sbjct: 746 PGPSGTPGDTGPPGLQGMPGERGIAGTP------GPKGDRGGIGEKGAEGTAGNDGARGL 799

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
              L   G            G + E G R +  P G    P + G
Sbjct: 800 PGPLGPPGPAGPT-------GEKGEPGPRGLVGPPGSRGNPGSRG 837



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGV---RGLVADPGVRGL 77
           +GM       G    P   G   D     L   PG RG+   PG    RG + + G  G 
Sbjct: 731 KGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790

Query: 78  VADPVVRRL---VADPGVRGLV---ADPGVRGLVADPGVRG 112
             +   R L   +  PG  G      +PG RGLV  PG RG
Sbjct: 791 AGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRG 831



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 19/59 (32%), Positives = 26/59 (44%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G    PG +G     G+RG   DP V     + G +G     G++G +  PG  G
Sbjct: 443 PGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEG 501



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 29/85 (34%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD---PVVRRLV 87
            G V  P   G V +P       + G  G     G RG   DPG  GL      P     V
Sbjct: 1032 GPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPV 1091

Query: 88   ADPGVRGLVADPGVRGLVADPGVRG 112
              PG  G   DPG RG +  PG  G
Sbjct: 1092 GAPGDAGQRGDPGSRGPIGPPGRAG 1116



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 39/113 (34%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 53   DPGVRGLVAD---PGVRGLVADPGVRGLVADPVVRRLVADP---GVRGLVADPGVRGLVA 106
            DPG  GL      PG  G V  PG  G   DP  R  +  P   G RGL    G RG   
Sbjct: 1072 DPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKG 1131

Query: 107  DPGVRGLAAALMVRGLVAAALMGC-RQGGSRRESGARCIRRPAGVTAAPETAG 158
            D G RG       RG     L G     G   E G+  I  P G    P   G
Sbjct: 1132 DHGDRGDRGQKGHRGF--TGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVG 1182



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 23/74 (31%), Positives = 30/74 (40%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           +G    P V+    +PG +G    PG +GL   PG  G    P ++      G  G    
Sbjct: 851 QGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGF 910

Query: 99  PGVRGLVADPGVRG 112
           PG  G V  PG  G
Sbjct: 911 PGSAGRVGPPGPAG 924



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G    PG +G    PG  G    P        PG +G     G+RG   DPGV G
Sbjct: 419 PGAIGTDGTPGAKGPTGSPGTSG---PPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPG 474



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 30/91 (32%), Positives = 34/91 (37%), Gaps = 3/91 (3%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G+  DP   G V D   R     PG  G   DPG  G     G  G       R +V  P
Sbjct: 942  GLRGDPGSHGRVGD---RGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMP 998

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
            G RG    PG+ G    PG  G   A   +G
Sbjct: 999  GQRGERGMPGLPGPAGTPGKVGPTGATGDKG 1029



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 36/123 (29%), Positives = 44/123 (35%), Gaps = 4/123 (3%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGV---RGLVADPGVRGLVADPGVRGLVADPVVRRL 86
            RG+V  P  RG    P +      PG     G   D G  G V  PG  G V +P     
Sbjct: 992  RGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGP 1051

Query: 87   VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
              + G  G     G RG   DPG  GL  +    G     +      G R + G+R    
Sbjct: 1052 AGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPG-TPGPVGAPGDAGQRGDPGSRGPIG 1110

Query: 147  PAG 149
            P G
Sbjct: 1111 PPG 1113



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 33/128 (25%), Positives = 44/128 (34%), Gaps = 7/128 (5%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P   G    P  +      G+RG   DPGV G   + G +G      ++  +  P
Sbjct: 438 GTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPP 497

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
           G  G     G  G V  PG  G   A   RG   +        G     GA+  R P G 
Sbjct: 498 GEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGS-------DGLPGPKGAQGERGPVGS 550

Query: 151 TAAPETAG 158
           +    + G
Sbjct: 551 SGPKGSQG 558



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
           V+G   +P  +G    P  + L   PG  G    PG++G     G  G    P     V 
Sbjct: 859 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVG 918

Query: 89  DPGVRGLVADPGVRGLVADPGVRG 112
            PG  G    PG  G + +PG  G
Sbjct: 919 PPGPAGA---PGPAGPLGEPGKEG 939



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 5/108 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G    PG RG    PG+ GL      + L    G +G V  PG +G     G  G
Sbjct: 274 NPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGL---EGPKGEVGAPGSKGEAGPTGPMG 330

Query: 113 LAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
               L  RG+         QG  G R   G      P G    P ++G
Sbjct: 331 AMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSG 378



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 22/82 (26%), Positives = 30/82 (36%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G V  P + G +            G  G    PG  G    PG +G      +R    DP
Sbjct: 411 GPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDP 470

Query: 91  GVRGLVADPGVRGLVADPGVRG 112
           GV G   + G +G     G++G
Sbjct: 471 GVPGFKGEAGPKGEPGPHGIQG 492



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           G +GL   PG  G    PG +G+  DP     V   G RG   +PG RG   +PG+ GL
Sbjct: 675 GFQGLPGPPGPPGEGGKPGDQGVPGDPGA---VGPLGPRGERGNPGERG---EPGITGL 727



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 34/128 (26%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G+   P   G    P  + +  DPG  G +   G RG   + G  G+   P  + +   
Sbjct: 677 QGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGG 736

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAA-ALMGCRQG-------GSRRESGA 141
            G  G    PG  G   D G  GL      RG+       G R G       G+    GA
Sbjct: 737 HGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGA 796

Query: 142 RCIRRPAG 149
           R +  P G
Sbjct: 797 RGLPGPLG 804



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 32/96 (33%), Positives = 35/96 (36%), Gaps = 22/96 (22%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG+RG   DPG  G V D G  G             PG  G   DPG  G     G  G 
Sbjct: 941  PGLRG---DPGSHGRVGDRGPAG------------PPGGPGDKGDPGEDGQPGPDGPPGP 985

Query: 114  AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            A     RG+V          G R E G   +  PAG
Sbjct: 986  AGTTGQRGIVG-------MPGQRGERGMPGLPGPAG 1014



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G +   G RG    PG  G   +P       +PG  G    PG RG    PG+ G
Sbjct: 241 EPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRN---GNPGEVGFAGSPGARGFPGAPGLPG 297

Query: 113 LAAALMVRGL 122
           L      +GL
Sbjct: 298 LKGHRGHKGL 307



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G V  P  +G          +   G RG+  + G  G    PG RG    P        
Sbjct: 311 KGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMP------GK 364

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
           PG  G +  PG  G   +PG++G A     RG
Sbjct: 365 PGPMGPLGIPGSSGFPGNPGMKGEAGPTGARG 396



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/92 (30%), Positives = 35/92 (38%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG    + + G    P   G V  P       DPG RG +  PG  G    PG +G   D
Sbjct: 1070 RGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGD 1129

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                    D G +G     G++GL   PG  G
Sbjct: 1130 KGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNG 1161



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 19/140 (13%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G   +P   GLV  PVV  +   PG  G    PG +G   + G +G       + +  +
Sbjct: 112 KGQKGEP---GLV--PVVTGIRGRPGPAG---PPGSQGPRGERGPKGRPGPRGPQGIDGE 163

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAA--ALMVRGLVAAALMGCRQG---------GSRRE 138
           PGV G    PG  G  + PG  GL+   +  + GL   + +G + G         G R  
Sbjct: 164 PGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGP 223

Query: 139 SGARCIRRPAGVTAAPETAG 158
            G +  +  AG T  P   G
Sbjct: 224 QGLQGQQGGAGPTGPPGEPG 243



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 19/59 (32%), Positives = 23/59 (38%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G   +PG++G     G RG       R     PG  G    PG  G    PG +G
Sbjct: 374 PGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKG 432



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           GM       G +  P   G   +P ++      G RG     G RG    PG  G    P
Sbjct: 360 GMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLP 419

Query: 82  VVRRLVADPGVRGLVADPGV------RGLVADPGVRGLAAALMVRGLVA-AALMGCR-QG 133
                   PG +G    PG        G    PG +G      +RG      + G + + 
Sbjct: 420 GAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEA 479

Query: 134 GSRRESGARCIRRPAG 149
           G + E G   I+ P G
Sbjct: 480 GPKGEPGPHGIQGPIG 495



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 18/58 (31%), Positives = 23/58 (39%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G  G+   PG  G +  PG  G   +P ++      G RG     G RG    PG  G
Sbjct: 357 GAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVG 414



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G RG     G  G   +PG  G +  P VR  V + G  G   +PG  G    PG   L 
Sbjct: 1173 GPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPG--HLT 1230

Query: 115  AAL 117
            AAL
Sbjct: 1231 AAL 1233



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 41/144 (28%), Positives = 47/144 (32%), Gaps = 25/144 (17%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV------ 83
            RG    P   G   DP         G  G     G RG+V  PG RG    P +      
Sbjct: 956  RGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGT 1015

Query: 84   ------RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRR 137
                       D G  G V  PG  G V +PG  G A      G          + G+  
Sbjct: 1016 PGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPG----------RDGAVG 1065

Query: 138  ESGARCIRRPAGV---TAAPETAG 158
            E G R    PAG+     AP T G
Sbjct: 1066 ERGDRGDPGPAGLPGSQGAPGTPG 1089



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL------VAD 107
           PG  G   +PG  G   +PG  G    P  R     PG+ GL    G +GL      V  
Sbjct: 260 PGKPGEDGEPGRNG---NPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGA 316

Query: 108 PGVRGLA 114
           PG +G A
Sbjct: 317 PGSKGEA 323



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G +G     G  G+   PG  G +  P       +PG++G     G RG     G RG
Sbjct: 348 GPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRG 405



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/101 (25%), Positives = 35/101 (34%), Gaps = 9/101 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRG---------LVAD 71
           +G      +RG   DP V G   +   +      G++G +  PG  G          V  
Sbjct: 455 QGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP 514

Query: 72  PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G    P  R      G+ G     G RG V   G +G
Sbjct: 515 PGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKG 555



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            + G  G+    G RG     G  G   +P     +  PGVRG V + G  G   +PG  G
Sbjct: 1162 EQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPG 1221



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGL------VADPGVRGLVADPVVR 84
           G   +P   G    P  R     PG+ GL    G +GL      V  PG +G        
Sbjct: 270 GRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPM 329

Query: 85  RLVADPGVRGLVADPGVRGLVADPGVRG 112
             +   G RG+  + G  G    PG RG
Sbjct: 330 GAMGPLGPRGMPGERGRLGPQGAPGQRG 357



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G++G     G  G   +PG  G +     R     PG  G   +PG  G   +PG  G A
Sbjct: 225 GLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNG---NPGEVGFA 281

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            +   RG   A  +     G +   G + +  P G   AP + G
Sbjct: 282 GSPGARGFPGAPGL----PGLKGHRGHKGLEGPKGEVGAPGSKG 321



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADP---GVRGLVADPGVRGLVADPVVRRL 86
           +G   DP   G   +  V      PG  G V      G  GL  + G +G       + L
Sbjct: 620 KGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGL 679

Query: 87  VADPGVRGLVADPGVRGLVADPGVRG 112
              PG  G    PG +G+  DPG  G
Sbjct: 680 PGPPGPPGEGGKPGDQGVPGDPGAVG 705


>gi|11386161 alpha 2 type IX collagen [Homo sapiens]
          Length = 689

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           RG V DP V  L  + G +G   +PG +G     GVRG    P        PGV+G    
Sbjct: 438 RGKVGDPGVAGLPGEKGEKGESGEPGPKG---QQGVRGEPGYPGPSGDAGAPGVQGYPGP 494

Query: 99  PGVRGLVADPGVRGLAAALMVRG 121
           PG RGL  + GV G      V G
Sbjct: 495 PGPRGLAGNRGVPGQPGRQGVEG 517



 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 39/92 (42%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG +    + G   D   RG V  P  +      G +G    PG +GL    G +G    
Sbjct: 375 RGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGK 434

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
              R  V DPGV GL  + G +G   +PG +G
Sbjct: 435 TGPRGKVGDPGVAGLPGEKGEKGESGEPGPKG 466



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 6/140 (4%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G+   S   G   +P  RG +    +     D G RG V  PG +G     G +G    
Sbjct: 357 QGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGI 416

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR-QGGSRRES 139
           P  + L    G +G     G RG V DPGV GL      +G   +   G + Q G R E 
Sbjct: 417 PGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKG--ESGEPGPKGQQGVRGEP 474

Query: 140 GARCIRRPAGVTAAPETAGH 159
           G      P+G   AP   G+
Sbjct: 475 G---YPGPSGDAGAPGVQGY 491



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G RG V DPGV GL  + G +G   +P  +      GVRG    PG  G    PGV+G  
Sbjct: 436 GPRGKVGDPGVAGLPGEKGEKGESGEPGPK---GQQGVRGEPGYPGPSGDAGAPGVQGYP 492

Query: 115 AALMVRGL 122
                RGL
Sbjct: 493 GPPGPRGL 500



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 12/126 (9%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
           G+   P ++ +    G RG++ DPG +G    PG +G V     + +   PG +G+   P
Sbjct: 181 GMKGPPGLQGVKGHAGKRGILGDPGHQG---KPGPKGDVGASGEQGIPGPPGPQGIRGYP 237

Query: 100 GVRGLVADPGVRGLAAALMVRGLVAAALMGCR-------QGGSRRESGARCIRRPAGVTA 152
           G+ G   + G  G     MV  + A    G         + G + + G+  IR P G+T 
Sbjct: 238 GMAGPKGETGPHGYKG--MVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITG 295

Query: 153 APETAG 158
                G
Sbjct: 296 PKGATG 301



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG    +  +G    P +RG       +     PG+ G    PG  G+    G  G    
Sbjct: 270 RGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGS 329

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           P  + L   PG  G    PG +G   +PG +GL
Sbjct: 330 PGHQGLAGVPGQPGTKGGPGDQG---EPGPQGL 359



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           +RG    +  +G    P + G    P    +    G  G    PG +GL   PG  G   
Sbjct: 287 IRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKG 346

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            P  +    +PG +GL    G  G   +PG RG
Sbjct: 347 GPGDQ---GEPGPQGLPGFSGPPGKEGEPGPRG 376



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 20/60 (33%), Positives = 27/60 (45%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG +GL    G  G   +PG RG +    +     D G RG V  PG +G     G +G
Sbjct: 353 EPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQG 412



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 22  GMVANSVVRGMVADPVVRGLVAD---PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLV 78
           G   +  + G+   P  +G   D   P  + L    G  G   +PG RG +   G+ G  
Sbjct: 328 GSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQK 387

Query: 79  ADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            D   R  V  PG +G     G +G    PG +GL
Sbjct: 388 GDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGL 422



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 19/60 (31%), Positives = 25/60 (41%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G +G    PG+RG     G +G    P +      PG  G+    G  G    PG +GLA
Sbjct: 277 GEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLA 336



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 35/141 (24%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G V  S  +G+   P  +G+   P +     + G  G     G  G    PG  G    
Sbjct: 213 KGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGP 272

Query: 81  PVVRRLVAD---PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRR 137
           P       D   PG+RG     G +G    PG+ G        G+  +A       G   
Sbjct: 273 PGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSA-------GQAG 325

Query: 138 ESGARCIRRPAGVTAAPETAG 158
           + G+   +  AGV   P T G
Sbjct: 326 QPGSPGHQGLAGVPGQPGTKG 346



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 45  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
           P +  L    G  G +  PGV+G    PG  GL   P        PG  GL  + G+RG 
Sbjct: 80  PGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGL-PGPGFAGPPGPPGPVGLPGEIGIRGP 138

Query: 105 VADPGVRG 112
             DPG  G
Sbjct: 139 KGDPGPDG 146



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPG-VRGLVADP-------VVRRLVADPG 91
           GL  +  +R    DPG  G    PG  G    PG ++GL               +   PG
Sbjct: 128 GLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKGPPG 187

Query: 92  VRGLVADPGVRGLVADPGVRG 112
           ++G+    G RG++ DPG +G
Sbjct: 188 LQGVKGHAGKRGILGDPGHQG 208



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/127 (25%), Positives = 43/127 (33%), Gaps = 22/127 (17%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGV------------ 101
           PG  G    PG  GL  + G+RG   DP        PG  G    PG             
Sbjct: 115 PGFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLC 174

Query: 102 -----RGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVT 151
                 G+   PG++G+      RG++       + G     G+  E G      P G+ 
Sbjct: 175 PTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIR 234

Query: 152 AAPETAG 158
             P  AG
Sbjct: 235 GYPGMAG 241



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG RG    PG  G+   PG  G+  D         PG +G     G  G    PG+ GL
Sbjct: 29  PGERGPPGPPGPPGV---PGSDGIDGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDGL 85

Query: 114 AAA 116
             A
Sbjct: 86  TGA 88



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 20/61 (32%), Positives = 24/61 (39%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G  G    PG +G     G  G    P +  L    G  G +  PGV+G    PG  G
Sbjct: 52  DNGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPG 111

Query: 113 L 113
           L
Sbjct: 112 L 112



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G V     +G+   P  + +   PG+ G   + G  G     G  G    P       +
Sbjct: 213 KGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPP------GE 266

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            G RG     G +G    PG+RG       +G      +  + G      G   ++  AG
Sbjct: 267 EGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDG----TPGTPGMKGSAG 322

Query: 150 VTAAPETAGH 159
               P + GH
Sbjct: 323 QAGQPGSPGH 332



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL---------VA 79
           VRG    P   G    P V+     PG RGL  + GV G     GV G          VA
Sbjct: 470 VRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVA 529

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             +++  +A+  V       G  G++  PG  G
Sbjct: 530 LKMLQEQLAEVAVSAKREALGAVGMMGPPGPPG 562



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 55  GVRGLVADPGVRGLVADPG--VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G  G+   PG+ GL   PG  + G   D         PG  G    PG+ G V  PG   
Sbjct: 612 GHPGMPGPPGIPGLPGRPGQAINGKDGDR------GSPGAPGEAGRPGLPGPVGLPGFCE 665

Query: 113 LAAALMVRGLVAAAL 127
            AA L      +A L
Sbjct: 666 PAACLGASAYASARL 680


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 40/128 (31%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G+   P + G    P        PG+RG   +PG  G   +PG RG       R     P
Sbjct: 402 GIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRG------ERGEAGIP 455

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
           GV G   + G  G   +PG  GL  A   RG       G R  G    +G    + PAG 
Sbjct: 456 GVPGAKGEDGKDGSPGEPGANGLPGAAGERG-----APGFR--GPAGPNGIPGEKGPAGE 508

Query: 151 TAAPETAG 158
             AP  AG
Sbjct: 509 RGAPGPAG 516



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 2/106 (1%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G+   PG+ G    PG  G    P +R    +PG  G   +PG RG   + G+ G+ 
Sbjct: 399 GPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVP 458

Query: 115 AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
            A    G   +       G  G+  E GA   R PAG    P   G
Sbjct: 459 GAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKG 504



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 6/84 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P V G   D         PG +G    PG  G+    G RGL   P +      P
Sbjct: 912 GAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGM------P 965

Query: 91  GVRGLVADPGVRGLVADPGVRGLA 114
           G RG     GV+G    PG  GL+
Sbjct: 966 GPRGSPGPQGVKGESGKPGANGLS 989



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 34/127 (26%), Positives = 42/127 (33%), Gaps = 24/127 (18%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G    PG +G V   G  G    P  R      G  G    PG  G+   PG +G 
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGE 397

Query: 114 AAALMVRGLVAAALMGCR----------------------QGGSRRESGARCIRRPAGVT 151
                + G  A  LMG R                      + G++ E G R  R  AG+ 
Sbjct: 398 MGPAGIPG--APGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIP 455

Query: 152 AAPETAG 158
             P   G
Sbjct: 456 GVPGAKG 462



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 36/128 (28%), Positives = 44/128 (34%), Gaps = 7/128 (5%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P  RGL   P       +PG  G    PG  G     G  G    P V     D 
Sbjct: 870 GAAGFPGARGLPGPPGSN---GNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDA 926

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV 150
           G  G    PG +G    PG  G+A     RGL     M     G R   G + ++  +G 
Sbjct: 927 GQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGM----PGPRGSPGPQGVKGESGK 982

Query: 151 TAAPETAG 158
             A   +G
Sbjct: 983 PGANGLSG 990



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 37/134 (27%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG    P V G   +        +PG  GL   PG  G    PG RG      +      
Sbjct: 449 RGEAGIPGVPGAKGEDGKDGSPGEPGANGL---PGAAGERGAPGFRGPAGPNGIPGEKGP 505

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GSRRESGARCI 144
            G RG     G RG   +PG  G+     +RG+  +       G     GS+ ESG    
Sbjct: 506 AGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP 565

Query: 145 RRPAGVTAAPETAG 158
             P+G    P   G
Sbjct: 566 PGPSGPRGQPGVMG 579



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 4/104 (3%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  G    PGV G   D G  G    P  +     PG  G+    G RGL   PG+ G  
Sbjct: 909  GNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPR 968

Query: 115  AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             +   +G+   +     + G+   SG R    P G+     TAG
Sbjct: 969  GSPGPQGVKGES----GKPGANGLSGERGPPGPQGLPGLAGTAG 1008



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 33/107 (30%), Positives = 38/107 (35%), Gaps = 2/107 (1%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G   +PG +G    PG +G    P V       G  G     GV+G    PG  G 
Sbjct: 812 PGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA 871

Query: 114 AAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
           A     RGL          G  G     G      PAG T AP + G
Sbjct: 872 AGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPG 918



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 35/117 (29%), Positives = 41/117 (35%), Gaps = 23/117 (19%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD---PGV 110
            PG  G+    G RGL   PG+ G    P         GV+G    PG  GL  +   PG 
Sbjct: 944  PGPLGIAGITGARGLAGPPGMPGPRGSP------GPQGVKGESGKPGANGLSGERGPPGP 997

Query: 111  RGLAAALMVRGLVAAALMGCRQG--------GSRRESGARCIRRPAGVTAAPETAGH 159
            +GL       GL   A    R G        G     G +  R   G   AP   GH
Sbjct: 998  QGLP------GLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGH 1048



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 40/143 (27%), Positives = 52/143 (36%), Gaps = 16/143 (11%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVAD---PGVRGLVADPGVRGLVADPGVRGLV 78
            G+   +  RG+   P + G    P  + +  +   PG  GL  + G  G    PG+ G  
Sbjct: 948  GIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTA 1007

Query: 79   ADPVVRRLVADPGVRGLVADP---GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGS 135
             +P         G+ G    P   G RG    PG  G        G V  A     + G 
Sbjct: 1008 GEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPA----GKSGD 1063

Query: 136  RRESGARCIRRPAGVTAAPETAG 158
            R ESG      PAG   AP  AG
Sbjct: 1064 RGESG------PAGPAGAPGPAG 1080



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVV------RRLVADPGVRGLVADPGVRGLVADP 108
           G  G    PG RGL   PG++G    P        R      G +G    PG++G    P
Sbjct: 231 GESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLP 290

Query: 109 GVRGLAAALMVRGLVA----AALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           G  G    +  RG         L G    G+R   GAR      G    P TAG
Sbjct: 291 GENGAPGPMGPRGAPGERGRPGLPGA--AGARGNDGARGSDGQPGPPGPPGTAG 342



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 40  GLVADPVVRRLVADPGV---RGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV 96
           GL   P +R     PG    +G    PG  G    PG++G+   P  R  +  PG +G  
Sbjct: 687 GLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGM---PGERGGLGSPGPKGDK 743

Query: 97  ADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPET 156
            +PG  G    PG  G        G    A     Q G + E GA  +   AG   +P  
Sbjct: 744 GEPGGPGADGVPGKDGPRGPTGPIGPPGPA----GQPGDKGEGGAPGLPGIAGPRGSPGE 799

Query: 157 AG 158
            G
Sbjct: 800 RG 801



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 32/106 (30%), Positives = 35/106 (33%), Gaps = 8/106 (7%)

Query: 56  VRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA 115
           V GL   PG  G    PG  G    P        PG  G    PG  G     G  G   
Sbjct: 166 VGGLAGYPGPAGPPGPPGPPGTSGHP------GSPGSPGYQGPPGEPGQAGPSGPPGPPG 219

Query: 116 ALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAGH 159
           A+   G         R G  G R   G   I+ PAG+   P   GH
Sbjct: 220 AIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGH 265



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 55  GVRGLVADPGVRGLVADPGV---RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
           G  GL   PG+RG    PG    +G    P        PG++G+   PG RG +  PG +
Sbjct: 684 GPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGM---PGERGGLGSPGPK 740

Query: 112 G 112
           G
Sbjct: 741 G 741



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 25/82 (30%), Positives = 29/82 (35%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G   +P  +G    P  +     PGV G     G  G     GV+G    P        P
Sbjct: 816 GQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFP 875

Query: 91  GVRGLVADPGVRGLVADPGVRG 112
           G RGL   PG  G    PG  G
Sbjct: 876 GARGLPGPPGSNGNPGPPGPSG 897



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 30/110 (27%), Positives = 39/110 (35%), Gaps = 5/110 (4%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           +  PG  G   D G  G    PG+ G    P  R     PG  G    PG  G   +PG 
Sbjct: 767 IGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNG---EPGG 823

Query: 111 RGLAAALMVRGLVAAALMGCRQGGS--RRESGARCIRRPAGVTAAPETAG 158
           +G   A   +G      +    GGS      G + ++   G    P  AG
Sbjct: 824 KGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAG 873



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVAD---PGVRGLVADPGVRGLVADPGVRGLVADPVVRR 85
           +RG   +P   G   +P  R    +   PGV G   + G  G   +PG  GL      R 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGER- 485

Query: 86  LVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
               PG RG     G+ G     G RG       RG
Sbjct: 486 --GAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRG 519



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 26/92 (28%), Positives = 32/92 (34%), Gaps = 3/92 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG    + + G       RG       R    +PG  G+   PG+RG+   PG  G    
Sbjct: 491 RGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGK 550

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           P         G  G    PG  G    PGV G
Sbjct: 551 P---GPPGSQGESGRPGPPGPSGPRGQPGVMG 579



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGV---RGLVADPG 109
           +PG +G    PG  G   D G  G    P    L   PG+RG    PG    +G    PG
Sbjct: 658 EPGPKGDAGAPGAPGGKGDAGAPGERGPP---GLAGAPGLRGGAGPPGPEGGKGAAGPPG 714

Query: 110 VRGLAAALMVRGL 122
             G A    ++G+
Sbjct: 715 PPGAAGTPGLQGM 727



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 29/104 (27%), Positives = 33/104 (31%), Gaps = 16/104 (15%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G +  PG  G   D G  G    P +      PG RG    PG  G    PG  G  
Sbjct: 762 GPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEP 821

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                RG            G + E G      P GV   P  +G
Sbjct: 822 GGKGERG----------APGEKGEGG------PPGVAGPPGGSG 849



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 32/105 (30%), Positives = 37/105 (35%), Gaps = 13/105 (12%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +GL   PG  G    PG  G   +P  +     PG  G   D G  G   + G  GL
Sbjct: 635 PGPQGLQGLPGTGG---PPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPG---ERGPPGL 688

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           A A  +RG       G    G     GA     P G    P   G
Sbjct: 689 AGAPGLRG-------GAGPPGPEGGKGAAGPPGPPGAAGTPGLQG 726



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 6/83 (7%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG       RG   +P    +   PG+RG+   PG  G    PG  G   +         
Sbjct: 509 RGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGES---GRPGP 565

Query: 90  PGVRGLVADPGVRGLVADPGVRG 112
           PG  G    PGV G    PG +G
Sbjct: 566 PGPSGPRGQPGVMGF---PGPKG 585



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 12/89 (13%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVAD---PGVR---GLVADPGVRGLVADPVVR 84
           G    P   G   +P  +     PG  G   D   PG R   GL   PG+RG    P   
Sbjct: 645 GTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPP--- 701

Query: 85  RLVADPGVRGLVADPGVRGLVADPGVRGL 113
                 G +G    PG  G    PG++G+
Sbjct: 702 ---GPEGGKGAAGPPGPPGAAGTPGLQGM 727



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G   + G RG    PG  G    P        PG +G V   G  G    PG RG
Sbjct: 314 PGAAGARGNDGARGSDGQPGPPG---PPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRG 369



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 37/132 (28%), Positives = 48/132 (36%), Gaps = 22/132 (16%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV---RRL 86
           +G    P   G    P ++ +   PG RG +  PG +G   +PG  G    P     R  
Sbjct: 707 KGAAGPPGPPGAAGTPGLQGM---PGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGP 763

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
               G  G    PG +G    PG+ G+A     RG            G R E+G      
Sbjct: 764 TGPIGPPGPAGQPGDKGEGGAPGLPGIAGP---RG----------SPGERGETGP---PG 807

Query: 147 PAGVTAAPETAG 158
           PAG   AP   G
Sbjct: 808 PAGFPGAPGQNG 819



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/106 (30%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG RG    PG  G    PG  G   +P  +     PG +G    PGV G     G  G 
Sbjct: 797 PGERGETGPPGPAGFPGAPGQNG---EPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGP 853

Query: 114 AAALMVRGLVAAALMGCRQG-GSRRESGARCIRRPAGVTAAPETAG 158
                V+G       G   G G+    GAR +  P G    P   G
Sbjct: 854 PGPQGVKG-----ERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPG 894



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 6/98 (6%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD------PGV 74
           RG    +  RG   +P   G+   P +R +   PG  G    PG  G   +      PG 
Sbjct: 509 RGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGP 568

Query: 75  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G    P V       G  G     G RG    PG +G
Sbjct: 569 SGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQG 606



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 29/105 (27%), Positives = 37/105 (35%), Gaps = 16/105 (15%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G     G  G     G +G    P  + L   PG  G    PG  G   +PG +G 
Sbjct: 608 PGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGG---PPGENGKPGEPGPKGD 664

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           A A                 G + ++GA   R P G+  AP   G
Sbjct: 665 AGA-------------PGAPGGKGDAGAPGERGPPGLAGAPGLRG 696



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 11/117 (9%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L  + G+ G    PG  G    PG RG    P       + G RG    PG  G    PG
Sbjct: 283 LKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPG---PPG 339

Query: 110 VRGLAAALMVRGLVAAALMGCRQG--------GSRRESGARCIRRPAGVTAAPETAG 158
             G   +   +G V  A      G        G +  +GA+    P G+  +P   G
Sbjct: 340 TAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKG 396



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/58 (31%), Positives = 22/58 (37%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G RG     G RG   + G RG       R    +PG  G     G +G +  PG  G
Sbjct: 1080 GSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAG 1137



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 12/77 (15%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           +G    P  + L   PG  G    PG  G   +PG +G    P        PG +G    
Sbjct: 629 KGDTGPPGPQGLQGLPGTGGP---PGENGKPGEPGPKGDAGAP------GAPGGKGDAGA 679

Query: 99  PGVR---GLVADPGVRG 112
           PG R   GL   PG+RG
Sbjct: 680 PGERGPPGLAGAPGLRG 696



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 16/107 (14%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            + G  G    PG  G    PG +G   D        + G RG     G RG   +PG  G
Sbjct: 1066 ESGPAGPAGAPGPAGSRGAPGPQGPRGDK------GETGERGAAGIKGHRGFPGNPGAPG 1119

Query: 113  LAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGH 159
                   +G +          GS   +G R    P+G      T+GH
Sbjct: 1120 SPGPAGQQGAI----------GSPGPAGPRGPVGPSGPPGKDGTSGH 1156


>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
           [Homo sapiens]
          Length = 1650

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 35/102 (34%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG       RGM  DP V+G   D     L   PG +G   D G +GL   PG  G   D
Sbjct: 451 RGRAGADGARGMPGDPGVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGD 507

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
                   + G RGL  + G RGL+   G  G+     VRG+
Sbjct: 508 D------GEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGM 543



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P +  L  D G +G    PG+ GL+  PG +G   D  +      PG +G +  P
Sbjct: 1304 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1363

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAP 154
            G  G +   G  GL      +G   A       GG + E G   ++ P G    P
Sbjct: 1364 GASGPIGPGGPPGLPGPAGPKGAKGAT----GPGGPKGEKG---VQGPPGHPGPP 1411



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 26/86 (30%), Positives = 36/86 (41%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G V  P + GL  D   +     PG+ GL+  PG +G   D G+ G    P  +  +  P
Sbjct: 1304 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1363

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAA 116
            G  G +   G  GL    G +G   A
Sbjct: 1364 GASGPIGPGGPPGLPGPAGPKGAKGA 1389



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 21/58 (36%), Positives = 28/58 (48%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G  G V  PG+ GL  D G +G    P +  L+  PG +G   D G+ G    PG +G
Sbjct: 1301 GPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKG 1358



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP---GVRGLVADPGVR 111
           G RG+  DPGV+G   D G  GL   P  +    D G +GL   P   G RG   + G R
Sbjct: 458 GARGMPGDPGVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPR 514

Query: 112 GLAAALMVRGLV 123
           GL      RGL+
Sbjct: 515 GLPGESGPRGLL 526



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV---ADPGVRGLVADPGVR 111
           G RGL  + G RGL+   G  G+   P VR +    G +G +    +PG  G    PG +
Sbjct: 512 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 571

Query: 112 GL 113
           GL
Sbjct: 572 GL 573



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVR------ 84
            G+  +   +G V DP  +    + G  G    PG  G V  PG  G   +P  R      
Sbjct: 992  GVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHF 1051

Query: 85   RLVADPGVRGLVADPGVRGLVADPGVRG 112
                D G RG    PG  GL   PG  G
Sbjct: 1052 GAKGDEGTRGFNGPPGPIGLQGLPGPSG 1079



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVR------GLVADPGVRGL 104
            V DPG +G   + G  G    PG  G V  P       +PG R      G   D G RG 
Sbjct: 1003 VGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGF 1062

Query: 105  VADPGVRGL 113
               PG  GL
Sbjct: 1063 NGPPGPIGL 1071



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G    PG +G     G +G +  P  R +    G+RGL    G +G    PG +G 
Sbjct: 604 PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGD 663

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 RG V          GSR E G    +   G T  P   G
Sbjct: 664 IGVKGDRGEVGVP-------GSRGEDGPEGPKGRTGPTGDPGPPG 701



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 16/105 (15%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVAD--PVVRR----LVADPGV---RGLVADPGVRGL 104
           PG  G    PG  G    PG++G   D  P   R    L   PG    RG     G RG+
Sbjct: 403 PGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGM 462

Query: 105 VADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
             DPGV+G      + GL         + G R ++GA+ +  P G
Sbjct: 463 PGDPGVKGDRGFDGLPGLPG-------EKGHRGDTGAQGLPGPPG 500



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 21/62 (33%), Positives = 27/62 (43%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V   G  G     G  G V  PG+ GL  D   +     PG+ GL+  PG +G   D G+
Sbjct: 1288 VGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGL 1347

Query: 111  RG 112
             G
Sbjct: 1348 PG 1349



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 23/161 (14%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G    S  +G +  P  RG+     +R L    G +G    PG +G +   G RG V  
Sbjct: 616 KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGV 675

Query: 81  PVVR------------RLVADPGVRGLVADP---GVRGLVADPGVRGLAAALMVRGLVAA 125
           P  R                DPG  GL+ +    GV GL   PG +G   +L   G   A
Sbjct: 676 PGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGA 735

Query: 126 ALMGCRQG--------GSRRESGARCIRRPAGVTAAPETAG 158
           +     +G        G R  +G R  R P G T      G
Sbjct: 736 SGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKG 776



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 20/58 (34%), Positives = 26/58 (44%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G+ G V   G  G     G  G V  P +  L  D G +G    PG+ GL+  PG +G
Sbjct: 1283 GLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQG 1340



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  GL   PG  G    PG  G    P     V  PG+ GL  D G +G    PG+ GL
Sbjct: 1276 PGPDGLRGLPGSVGQQGRPGATGQAGPPGP---VGPPGLPGLRGDAGAKGEKGHPGLIGL 1332



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 37/136 (27%), Positives = 47/136 (34%), Gaps = 11/136 (8%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P   G    P ++    D G +G     G+ G     G RG       R +  DP
Sbjct: 407 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 466

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--------GSRRESGAR 142
           GV+G   D G  GL   PG +G       +GL         +G        G   ESG R
Sbjct: 467 GVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPR 523

Query: 143 CIRRPAGVTAAPETAG 158
            +  P G    P   G
Sbjct: 524 GLLGPKGPPGIPGPPG 539



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLVADPGVRGL 77
           RG+   S  RG++      G+   P VR +    G +G +    +PG  G    PG +GL
Sbjct: 514 RGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGL 573

Query: 78  VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
              P  +  +   G +G    PG+ G+    G  G
Sbjct: 574 ---PGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPG 605



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 14/100 (14%)

Query: 55   GVRGLVADPGVRG---LVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
            GV+G V  PG  G   +  + G +G V DP  +    + G  G    PG  G V  PG  
Sbjct: 977  GVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAA 1036

Query: 112  GLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAG 149
            G       RG          QG  G++ + G R    P G
Sbjct: 1037 GADGEPGARG---------PQGHFGAKGDEGTRGFNGPPG 1067



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG +G   + G  G+  +PGV+G   +   +     PG  G    PG +G   D G +G 
Sbjct: 1123 PGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG---PPGPKGPTGDDGPKGN 1179

Query: 114  AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
               +   G          +GG R + GA+  R   G    P + G
Sbjct: 1180 PGPVGFPGDPGPP----GEGGPRGQDGAKGDRGEDGEPGQPGSPG 1220



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)

Query: 20  VRGMVANSVVRGMVA---DPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 76
           VRGM      +G +    +P   G    P  + L    G  G   + G +G    PG+ G
Sbjct: 540 VRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPG 599

Query: 77  LVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
               P        PG +G     G +G +  PG RG+     +RGL
Sbjct: 600 SDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGL 645



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           DPG  G     G  GL   PG RGL            PG++G     G  G    PG RG
Sbjct: 882 DPGPPGAPGKDGPAGLRGFPGERGLPGT------AGGPGLKGNEGPSGPPGPAGSPGERG 935

Query: 113 LAAA 116
            A +
Sbjct: 936 AAGS 939



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 3/94 (3%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G V    + G+  D   +G    P +  L+  PG +G   D G+ G    PG +G +  P
Sbjct: 1304 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1363

Query: 82   VVRRLV---ADPGVRGLVADPGVRGLVADPGVRG 112
                 +     PG+ G     G +G     G +G
Sbjct: 1364 GASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKG 1397



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 23/91 (25%), Positives = 37/91 (40%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  ++  +G    P + GL+  P  +    D G+ G    PG +G +  PG  G +   
Sbjct: 1313 GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPG 1372

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                L    G +G     G  G   + GV+G
Sbjct: 1373 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQG 1403



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G    PG +G    PG  GL   P  R    + G +G    PG  G+V   G  G 
Sbjct: 793 PGPQGPNGFPGPKGPPGPPGKDGLPGHPGQR---GEVGFQGKTGPPGPPGVVGPQGAAGE 849

Query: 114 AAALMVRG 121
              +  RG
Sbjct: 850 TGPMGERG 857



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 29/97 (29%), Positives = 35/97 (36%), Gaps = 6/97 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G   N    G    P   G V  P       +PG RG     G +G   D G RG    
Sbjct: 1009 KGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKG---DEGTRGFNGP 1065

Query: 81   PV---VRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            P    ++ L    G +G   D G  G    PG RG A
Sbjct: 1066 PGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPA 1102



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 21/59 (35%), Positives = 23/59 (38%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG +GL    G  G   DPG  G         L   PG RGL    G  GL  + G  G
Sbjct: 865 PGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSG 923



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 24/93 (25%), Positives = 36/93 (38%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G+   S  +G   D    G    P  R      G  G    PG  G +  PG +G   
Sbjct: 1071 LQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPG 1130

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +     +  +PGV+G   + G +G    PG  G
Sbjct: 1131 ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1163



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 51  VADPG--VRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 108
           V +PG  V G     G  GL+  PG++G          V DPG RG     G+ G    P
Sbjct: 304 VLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGP------VGDPGERGPPGRAGLPGSDGAP 357

Query: 109 GVRGLAAALMVR 120
           G  G +  L  R
Sbjct: 358 GPPGTSLMLPFR 369



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 13/114 (11%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL---VADPVVRRLVADPGVRGL 95
            +G   DP     +  PG  G V   G  G     G+RGL   V            G  G 
Sbjct: 1249 KGAKGDPGA---IGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGP 1305

Query: 96   VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            V  PG+ GL  D G +G      + GL+          G + E G R +  P G
Sbjct: 1306 VGPPGLPGLRGDAGAKGEKGHPGLIGLIGPP-------GEQGEKGDRGLPGPQG 1352



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLV---ADPGVRGLVADPGVRGLVADPGVRGL 77
           RG++      G+   P VRG+      +  +    +PG  G    PG +GL    G  G 
Sbjct: 523 RGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGP 582

Query: 78  VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             +   +     PG+ G    PG  G    PG +G
Sbjct: 583 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKG 617



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/113 (28%), Positives = 39/113 (34%), Gaps = 9/113 (7%)

Query: 53  DPGVRGLVAD------PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA 106
           DPG  GL+ +      PG+ G     G +G +  P       + G RGL    G RG   
Sbjct: 696 DPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 755

Query: 107 DPGVRGLAAALMVRGLVAAALMGCRQG-GSRRESGARCIRRPAGVTAAPETAG 158
             G RG        G   A   G   G G     G R +  P G    P   G
Sbjct: 756 PTGPRGQRGPRGATGKSGA--KGTSGGDGPHGPPGERGLPGPQGPNGFPGPKG 806



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/106 (30%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G + + G  G    PG +GL           DPG  G     G  GL   PG RGL 
Sbjct: 848 GETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLP 907

Query: 115 AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                 GL          G  GS  E GA     P G    P   G
Sbjct: 908 GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQG 953



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG +G +   G  G+    G+ G    P V     + G +G V DPG +G   + G  G
Sbjct: 964  PGEKGPIGPTGRDGVQGPVGLPGPAGPPGV---AGEDGDKGEVGDPGQKGTKGNKGEHG 1019



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 24/100 (24%), Positives = 37/100 (37%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   D   +G   +  + G++  P  +G   D  +      PG +G +  PG  G +   
Sbjct: 1313 GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPG 1372

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G  GL      +      G  G   + GV+G    PG  G
Sbjct: 1373 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPG 1412



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL   PG RG V   G +G    P    +V   G  G     G RG    PG  G 
Sbjct: 811 PGKDGLPGHPGQRGEV---GFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPG- 866

Query: 114 AAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                 +GL   A     +G     G+  + G   +R   G    P TAG
Sbjct: 867 -----EQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAG 911



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 33/111 (29%), Positives = 39/111 (35%), Gaps = 10/111 (9%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVV------RRLVADPGVRGLVADPGVRGLVAD 107
            PG +G   D G +G   +PG  G   DP        R      G RG   +PG  G    
Sbjct: 1165 PGPKGPTGDDGPKG---NPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221

Query: 108  PGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             G  G    L  RG   +     RQGG   +     I  P G T     AG
Sbjct: 1222 TGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAP-GKTGPVGPAG 1271



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 3/86 (3%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGL---VADPGVRGLVADPVVRRLVADPGVRGLV 96
           G   DP         G  GL   PG RGL      PG++G             PG RG  
Sbjct: 878 GTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAA 937

Query: 97  ADPGVRGLVADPGVRGLAAALMVRGL 122
              G  G    PG +G   A   +G+
Sbjct: 938 GSGGPIGPPGRPGPQGPPGAAGEKGV 963



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G    PG +G +   G  G+     +      PGV G   D   +G V DPG +G
Sbjct: 955  PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGD---KGEVGDPGQKG 1010



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 18/58 (31%), Positives = 23/58 (39%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G++GL    G +G   D G  G    P  R      G  G    PG  G +  PG +G
Sbjct: 1070 GLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG 1127



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 38  VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
           +RG   +  +      PG++G     G  G    PG RG          +  PG  G   
Sbjct: 897 LRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGS---GGPIGPPGRPGPQG 953

Query: 98  DPGVRGLVADPGVRG 112
            PG  G    PG +G
Sbjct: 954 PPGAAGEKGVPGEKG 968


>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein
           [Homo sapiens]
          Length = 1629

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 35/102 (34%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG       RGM  DP V+G   D     L   PG +G   D G +GL   PG  G   D
Sbjct: 430 RGRAGADGARGMPGDPGVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGD 486

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
                   + G RGL  + G RGL+   G  G+     VRG+
Sbjct: 487 D------GEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGM 522



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P +  L  D G +G    PG+ GL+  PG +G   D  +      PG +G +  P
Sbjct: 1283 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1342

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAP 154
            G  G +   G  GL      +G   A       GG + E G   ++ P G    P
Sbjct: 1343 GASGPIGPGGPPGLPGPAGPKGAKGAT----GPGGPKGEKG---VQGPPGHPGPP 1390



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 26/86 (30%), Positives = 36/86 (41%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G V  P + GL  D   +     PG+ GL+  PG +G   D G+ G    P  +  +  P
Sbjct: 1283 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1342

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAA 116
            G  G +   G  GL    G +G   A
Sbjct: 1343 GASGPIGPGGPPGLPGPAGPKGAKGA 1368



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 21/58 (36%), Positives = 28/58 (48%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G  G V  PG+ GL  D G +G    P +  L+  PG +G   D G+ G    PG +G
Sbjct: 1280 GPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKG 1337



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP---GVRGLVADPGVR 111
           G RG+  DPGV+G   D G  GL   P  +    D G +GL   P   G RG   + G R
Sbjct: 437 GARGMPGDPGVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPR 493

Query: 112 GLAAALMVRGLV 123
           GL      RGL+
Sbjct: 494 GLPGESGPRGLL 505



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV---ADPGVRGLVADPGVR 111
           G RGL  + G RGL+   G  G+   P VR +    G +G +    +PG  G    PG +
Sbjct: 491 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 550

Query: 112 GL 113
           GL
Sbjct: 551 GL 552



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVR------ 84
            G+  +   +G V DP  +    + G  G    PG  G V  PG  G   +P  R      
Sbjct: 971  GVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHF 1030

Query: 85   RLVADPGVRGLVADPGVRGLVADPGVRG 112
                D G RG    PG  GL   PG  G
Sbjct: 1031 GAKGDEGTRGFNGPPGPIGLQGLPGPSG 1058



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVR------GLVADPGVRGL 104
            V DPG +G   + G  G    PG  G V  P       +PG R      G   D G RG 
Sbjct: 982  VGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGF 1041

Query: 105  VADPGVRGL 113
               PG  GL
Sbjct: 1042 NGPPGPIGL 1050



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G    PG +G     G +G +  P  R +    G+RGL    G +G    PG +G 
Sbjct: 583 PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGD 642

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 RG V          GSR E G    +   G T  P   G
Sbjct: 643 IGVKGDRGEVGVP-------GSRGEDGPEGPKGRTGPTGDPGPPG 680



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 16/105 (15%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVAD--PVVRR----LVADPGV---RGLVADPGVRGL 104
           PG  G    PG  G    PG++G   D  P   R    L   PG    RG     G RG+
Sbjct: 382 PGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGM 441

Query: 105 VADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
             DPGV+G      + GL         + G R ++GA+ +  P G
Sbjct: 442 PGDPGVKGDRGFDGLPGLPG-------EKGHRGDTGAQGLPGPPG 479



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 21/62 (33%), Positives = 27/62 (43%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V   G  G     G  G V  PG+ GL  D   +     PG+ GL+  PG +G   D G+
Sbjct: 1267 VGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGL 1326

Query: 111  RG 112
             G
Sbjct: 1327 PG 1328



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 23/161 (14%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G    S  +G +  P  RG+     +R L    G +G    PG +G +   G RG V  
Sbjct: 595 KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGV 654

Query: 81  PVVR------------RLVADPGVRGLVADP---GVRGLVADPGVRGLAAALMVRGLVAA 125
           P  R                DPG  GL+ +    GV GL   PG +G   +L   G   A
Sbjct: 655 PGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGA 714

Query: 126 ALMGCRQG--------GSRRESGARCIRRPAGVTAAPETAG 158
           +     +G        G R  +G R  R P G T      G
Sbjct: 715 SGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKG 755



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 20/58 (34%), Positives = 26/58 (44%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G+ G V   G  G     G  G V  P +  L  D G +G    PG+ GL+  PG +G
Sbjct: 1262 GLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQG 1319



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  GL   PG  G    PG  G    P     V  PG+ GL  D G +G    PG+ GL
Sbjct: 1255 PGPDGLRGLPGSVGQQGRPGATGQAGPPGP---VGPPGLPGLRGDAGAKGEKGHPGLIGL 1311



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 37/136 (27%), Positives = 47/136 (34%), Gaps = 11/136 (8%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P   G    P ++    D G +G     G+ G     G RG       R +  DP
Sbjct: 386 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 445

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--------GSRRESGAR 142
           GV+G   D G  GL   PG +G       +GL         +G        G   ESG R
Sbjct: 446 GVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPR 502

Query: 143 CIRRPAGVTAAPETAG 158
            +  P G    P   G
Sbjct: 503 GLLGPKGPPGIPGPPG 518



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLVADPGVRGL 77
           RG+   S  RG++      G+   P VR +    G +G +    +PG  G    PG +GL
Sbjct: 493 RGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGL 552

Query: 78  VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
              P  +  +   G +G    PG+ G+    G  G
Sbjct: 553 ---PGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPG 584



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 14/100 (14%)

Query: 55   GVRGLVADPGVRG---LVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
            GV+G V  PG  G   +  + G +G V DP  +    + G  G    PG  G V  PG  
Sbjct: 956  GVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAA 1015

Query: 112  GLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAG 149
            G       RG          QG  G++ + G R    P G
Sbjct: 1016 GADGEPGARG---------PQGHFGAKGDEGTRGFNGPPG 1046



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG +G   + G  G+  +PGV+G   +   +     PG  G    PG +G   D G +G 
Sbjct: 1102 PGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG---PPGPKGPTGDDGPKGN 1158

Query: 114  AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
               +   G          +GG R + GA+  R   G    P + G
Sbjct: 1159 PGPVGFPGDPGPP----GEGGPRGQDGAKGDRGEDGEPGQPGSPG 1199



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)

Query: 20  VRGMVANSVVRGMVA---DPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 76
           VRGM      +G +    +P   G    P  + L    G  G   + G +G    PG+ G
Sbjct: 519 VRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPG 578

Query: 77  LVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
               P        PG +G     G +G +  PG RG+     +RGL
Sbjct: 579 SDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGL 624



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           DPG  G     G  GL   PG RGL            PG++G     G  G    PG RG
Sbjct: 861 DPGPPGAPGKDGPAGLRGFPGERGLPGT------AGGPGLKGNEGPSGPPGPAGSPGERG 914

Query: 113 LAAA 116
            A +
Sbjct: 915 AAGS 918



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 3/94 (3%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G V    + G+  D   +G    P +  L+  PG +G   D G+ G    PG +G +  P
Sbjct: 1283 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1342

Query: 82   VVRRLV---ADPGVRGLVADPGVRGLVADPGVRG 112
                 +     PG+ G     G +G     G +G
Sbjct: 1343 GASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKG 1376



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 23/91 (25%), Positives = 37/91 (40%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  ++  +G    P + GL+  P  +    D G+ G    PG +G +  PG  G +   
Sbjct: 1292 GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPG 1351

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                L    G +G     G  G   + GV+G
Sbjct: 1352 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQG 1382



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G    PG +G    PG  GL   P  R    + G +G    PG  G+V   G  G 
Sbjct: 772 PGPQGPNGFPGPKGPPGPPGKDGLPGHPGQR---GEVGFQGKTGPPGPPGVVGPQGAAGE 828

Query: 114 AAALMVRG 121
              +  RG
Sbjct: 829 TGPMGERG 836



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 29/97 (29%), Positives = 35/97 (36%), Gaps = 6/97 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G   N    G    P   G V  P       +PG RG     G +G   D G RG    
Sbjct: 988  KGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKG---DEGTRGFNGP 1044

Query: 81   PV---VRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            P    ++ L    G +G   D G  G    PG RG A
Sbjct: 1045 PGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPA 1081



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 21/59 (35%), Positives = 23/59 (38%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG +GL    G  G   DPG  G         L   PG RGL    G  GL  + G  G
Sbjct: 844 PGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSG 902



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 24/93 (25%), Positives = 36/93 (38%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G+   S  +G   D    G    P  R      G  G    PG  G +  PG +G   
Sbjct: 1050 LQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPG 1109

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +     +  +PGV+G   + G +G    PG  G
Sbjct: 1110 ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1142



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 51  VADPG--VRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 108
           V +PG  V G     G  GL+  PG++G          V DPG RG     G+ G    P
Sbjct: 283 VLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGP------VGDPGERGPPGRAGLPGSDGAP 336

Query: 109 GVRGLAAALMVR 120
           G  G +  L  R
Sbjct: 337 GPPGTSLMLPFR 348



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 13/114 (11%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL---VADPVVRRLVADPGVRGL 95
            +G   DP     +  PG  G V   G  G     G+RGL   V            G  G 
Sbjct: 1228 KGAKGDPGA---IGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGP 1284

Query: 96   VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            V  PG+ GL  D G +G      + GL+          G + E G R +  P G
Sbjct: 1285 VGPPGLPGLRGDAGAKGEKGHPGLIGLIGPP-------GEQGEKGDRGLPGPQG 1331



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLV---ADPGVRGLVADPGVRGLVADPGVRGL 77
           RG++      G+   P VRG+      +  +    +PG  G    PG +GL    G  G 
Sbjct: 502 RGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGP 561

Query: 78  VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             +   +     PG+ G    PG  G    PG +G
Sbjct: 562 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKG 596



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/113 (28%), Positives = 39/113 (34%), Gaps = 9/113 (7%)

Query: 53  DPGVRGLVAD------PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA 106
           DPG  GL+ +      PG+ G     G +G +  P       + G RGL    G RG   
Sbjct: 675 DPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 734

Query: 107 DPGVRGLAAALMVRGLVAAALMGCRQG-GSRRESGARCIRRPAGVTAAPETAG 158
             G RG        G   A   G   G G     G R +  P G    P   G
Sbjct: 735 PTGPRGQRGPRGATGKSGA--KGTSGGDGPHGPPGERGLPGPQGPNGFPGPKG 785



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/106 (30%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G + + G  G    PG +GL           DPG  G     G  GL   PG RGL 
Sbjct: 827 GETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLP 886

Query: 115 AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                 GL          G  GS  E GA     P G    P   G
Sbjct: 887 GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQG 932



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG +G +   G  G+    G+ G    P V     + G +G V DPG +G   + G  G
Sbjct: 943 PGEKGPIGPTGRDGVQGPVGLPGPAGPPGV---AGEDGDKGEVGDPGQKGTKGNKGEHG 998



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 24/100 (24%), Positives = 37/100 (37%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   D   +G   +  + G++  P  +G   D  +      PG +G +  PG  G +   
Sbjct: 1292 GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPG 1351

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G  GL      +      G  G   + GV+G    PG  G
Sbjct: 1352 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPG 1391



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL   PG RG V   G +G    P    +V   G  G     G RG    PG  G 
Sbjct: 790 PGKDGLPGHPGQRGEV---GFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPG- 845

Query: 114 AAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                 +GL   A     +G     G+  + G   +R   G    P TAG
Sbjct: 846 -----EQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAG 890



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 33/111 (29%), Positives = 39/111 (35%), Gaps = 10/111 (9%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVV------RRLVADPGVRGLVADPGVRGLVAD 107
            PG +G   D G +G   +PG  G   DP        R      G RG   +PG  G    
Sbjct: 1144 PGPKGPTGDDGPKG---NPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1200

Query: 108  PGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             G  G    L  RG   +     RQGG   +     I  P G T     AG
Sbjct: 1201 TGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAP-GKTGPVGPAG 1250



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 3/86 (3%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGL---VADPGVRGLVADPVVRRLVADPGVRGLV 96
           G   DP         G  GL   PG RGL      PG++G             PG RG  
Sbjct: 857 GTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAA 916

Query: 97  ADPGVRGLVADPGVRGLAAALMVRGL 122
              G  G    PG +G   A   +G+
Sbjct: 917 GSGGPIGPPGRPGPQGPPGAAGEKGV 942



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G    PG +G +   G  G+     +      PGV G   D   +G V DPG +G
Sbjct: 934 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGD---KGEVGDPGQKG 989



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 18/58 (31%), Positives = 23/58 (39%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G++GL    G +G   D G  G    P  R      G  G    PG  G +  PG +G
Sbjct: 1049 GLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG 1106



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 38  VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
           +RG   +  +      PG++G     G  G    PG RG          +  PG  G   
Sbjct: 876 LRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGS---GGPIGPPGRPGPQG 932

Query: 98  DPGVRGLVADPGVRG 112
            PG  G    PG +G
Sbjct: 933 PPGAAGEKGVPGEKG 947


>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein
           [Homo sapiens]
          Length = 1736

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 35/102 (34%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG       RGM  DP V+G   D     L   PG +G   D G +GL   PG  G   D
Sbjct: 537 RGRAGADGARGMPGDPGVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGD 593

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
                   + G RGL  + G RGL+   G  G+     VRG+
Sbjct: 594 D------GEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGM 629



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P +  L  D G +G    PG+ GL+  PG +G   D  +      PG +G +  P
Sbjct: 1390 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1449

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAP 154
            G  G +   G  GL      +G   A       GG + E G   ++ P G    P
Sbjct: 1450 GASGPIGPGGPPGLPGPAGPKGAKGAT----GPGGPKGEKG---VQGPPGHPGPP 1497



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 26/86 (30%), Positives = 36/86 (41%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G V  P + GL  D   +     PG+ GL+  PG +G   D G+ G    P  +  +  P
Sbjct: 1390 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1449

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAA 116
            G  G +   G  GL    G +G   A
Sbjct: 1450 GASGPIGPGGPPGLPGPAGPKGAKGA 1475



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 21/58 (36%), Positives = 28/58 (48%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G  G V  PG+ GL  D G +G    P +  L+  PG +G   D G+ G    PG +G
Sbjct: 1387 GPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKG 1444



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP---GVRGLVADPGVR 111
           G RG+  DPGV+G   D G  GL   P  +    D G +GL   P   G RG   + G R
Sbjct: 544 GARGMPGDPGVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPR 600

Query: 112 GLAAALMVRGLV 123
           GL      RGL+
Sbjct: 601 GLPGESGPRGLL 612



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV---ADPGVRGLVADPGVR 111
           G RGL  + G RGL+   G  G+   P VR +    G +G +    +PG  G    PG +
Sbjct: 598 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 657

Query: 112 GL 113
           GL
Sbjct: 658 GL 659



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVR------ 84
            G+  +   +G V DP  +    + G  G    PG  G V  PG  G   +P  R      
Sbjct: 1078 GVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHF 1137

Query: 85   RLVADPGVRGLVADPGVRGLVADPGVRG 112
                D G RG    PG  GL   PG  G
Sbjct: 1138 GAKGDEGTRGFNGPPGPIGLQGLPGPSG 1165



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVR------GLVADPGVRGL 104
            V DPG +G   + G  G    PG  G V  P       +PG R      G   D G RG 
Sbjct: 1089 VGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGF 1148

Query: 105  VADPGVRGL 113
               PG  GL
Sbjct: 1149 NGPPGPIGL 1157



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G    PG +G     G +G +  P  R +    G+RGL    G +G    PG +G 
Sbjct: 690 PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGD 749

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 RG V          GSR E G    +   G T  P   G
Sbjct: 750 IGVKGDRGEVGVP-------GSRGEDGPEGPKGRTGPTGDPGPPG 787



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 16/105 (15%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVAD--PVVRR----LVADPGV---RGLVADPGVRGL 104
           PG  G    PG  G    PG++G   D  P   R    L   PG    RG     G RG+
Sbjct: 489 PGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGM 548

Query: 105 VADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
             DPGV+G      + GL         + G R ++GA+ +  P G
Sbjct: 549 PGDPGVKGDRGFDGLPGLPG-------EKGHRGDTGAQGLPGPPG 586



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 21/62 (33%), Positives = 27/62 (43%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V   G  G     G  G V  PG+ GL  D   +     PG+ GL+  PG +G   D G+
Sbjct: 1374 VGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGL 1433

Query: 111  RG 112
             G
Sbjct: 1434 PG 1435



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 23/161 (14%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G    S  +G +  P  RG+     +R L    G +G    PG +G +   G RG V  
Sbjct: 702 KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGV 761

Query: 81  PVVR------------RLVADPGVRGLVADP---GVRGLVADPGVRGLAAALMVRGLVAA 125
           P  R                DPG  GL+ +    GV GL   PG +G   +L   G   A
Sbjct: 762 PGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGA 821

Query: 126 ALMGCRQG--------GSRRESGARCIRRPAGVTAAPETAG 158
           +     +G        G R  +G R  R P G T      G
Sbjct: 822 SGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKG 862



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 20/58 (34%), Positives = 26/58 (44%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G+ G V   G  G     G  G V  P +  L  D G +G    PG+ GL+  PG +G
Sbjct: 1369 GLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQG 1426



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  GL   PG  G    PG  G    P     V  PG+ GL  D G +G    PG+ GL
Sbjct: 1362 PGPDGLRGLPGSVGQQGRPGATGQAGPPGP---VGPPGLPGLRGDAGAKGEKGHPGLIGL 1418



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 37/136 (27%), Positives = 47/136 (34%), Gaps = 11/136 (8%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P   G    P ++    D G +G     G+ G     G RG       R +  DP
Sbjct: 493 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 552

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--------GSRRESGAR 142
           GV+G   D G  GL   PG +G       +GL         +G        G   ESG R
Sbjct: 553 GVKG---DRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPR 609

Query: 143 CIRRPAGVTAAPETAG 158
            +  P G    P   G
Sbjct: 610 GLLGPKGPPGIPGPPG 625



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLVADPGVRGL 77
           RG+   S  RG++      G+   P VR +    G +G +    +PG  G    PG +GL
Sbjct: 600 RGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGL 659

Query: 78  VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
              P  +  +   G +G    PG+ G+    G  G
Sbjct: 660 ---PGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPG 691



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 14/100 (14%)

Query: 55   GVRGLVADPGVRG---LVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVR 111
            GV+G V  PG  G   +  + G +G V DP  +    + G  G    PG  G V  PG  
Sbjct: 1063 GVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAA 1122

Query: 112  GLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAG 149
            G       RG          QG  G++ + G R    P G
Sbjct: 1123 GADGEPGARG---------PQGHFGAKGDEGTRGFNGPPG 1153



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG +G   + G  G+  +PGV+G   +   +     PG  G    PG +G   D G +G 
Sbjct: 1209 PGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG---PPGPKGPTGDDGPKGN 1265

Query: 114  AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
               +   G          +GG R + GA+  R   G    P + G
Sbjct: 1266 PGPVGFPGDPGPP----GEGGPRGQDGAKGDRGEDGEPGQPGSPG 1306



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)

Query: 20  VRGMVANSVVRGMVA---DPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 76
           VRGM      +G +    +P   G    P  + L    G  G   + G +G    PG+ G
Sbjct: 626 VRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPG 685

Query: 77  LVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
               P        PG +G     G +G +  PG RG+     +RGL
Sbjct: 686 SDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGL 731



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 53   DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            DPG  G     G  GL   PG RGL            PG++G     G  G    PG RG
Sbjct: 968  DPGPPGAPGKDGPAGLRGFPGERGLPGT------AGGPGLKGNEGPSGPPGPAGSPGERG 1021

Query: 113  LAAA 116
             A +
Sbjct: 1022 AAGS 1025



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 3/94 (3%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G V    + G+  D   +G    P +  L+  PG +G   D G+ G    PG +G +  P
Sbjct: 1390 GPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIP 1449

Query: 82   VVRRLV---ADPGVRGLVADPGVRGLVADPGVRG 112
                 +     PG+ G     G +G     G +G
Sbjct: 1450 GASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKG 1483



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 23/91 (25%), Positives = 37/91 (40%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  ++  +G    P + GL+  P  +    D G+ G    PG +G +  PG  G +   
Sbjct: 1399 GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPG 1458

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                L    G +G     G  G   + GV+G
Sbjct: 1459 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQG 1489



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G    PG +G    PG  GL   P  R    + G +G    PG  G+V   G  G 
Sbjct: 879 PGPQGPNGFPGPKGPPGPPGKDGLPGHPGQR---GEVGFQGKTGPPGPPGVVGPQGAAGE 935

Query: 114 AAALMVRG 121
              +  RG
Sbjct: 936 TGPMGERG 943



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 29/97 (29%), Positives = 35/97 (36%), Gaps = 6/97 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G   N    G    P   G V  P       +PG RG     G +G   D G RG    
Sbjct: 1095 KGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKG---DEGTRGFNGP 1151

Query: 81   PV---VRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            P    ++ L    G +G   D G  G    PG RG A
Sbjct: 1152 PGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPA 1188



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 21/59 (35%), Positives = 23/59 (38%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG +GL    G  G   DPG  G         L   PG RGL    G  GL  + G  G
Sbjct: 951  PGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSG 1009



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 24/93 (25%), Positives = 36/93 (38%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            ++G+   S  +G   D    G    P  R      G  G    PG  G +  PG +G   
Sbjct: 1157 LQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPG 1216

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +     +  +PGV+G   + G +G    PG  G
Sbjct: 1217 ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1249



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 51  VADPG--VRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 108
           V +PG  V G     G  GL+  PG++G          V DPG RG     G+ G    P
Sbjct: 390 VLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGP------VGDPGERGPPGRAGLPGSDGAP 443

Query: 109 GVRGLAAALMVR 120
           G  G +  L  R
Sbjct: 444 GPPGTSLMLPFR 455



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 13/114 (11%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL---VADPVVRRLVADPGVRGL 95
            +G   DP     +  PG  G V   G  G     G+RGL   V            G  G 
Sbjct: 1335 KGAKGDPGA---IGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGP 1391

Query: 96   VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            V  PG+ GL  D G +G      + GL+          G + E G R +  P G
Sbjct: 1392 VGPPGLPGLRGDAGAKGEKGHPGLIGLIGPP-------GEQGEKGDRGLPGPQG 1438



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLV---ADPGVRGLVADPGVRGLVADPGVRGL 77
           RG++      G+   P VRG+      +  +    +PG  G    PG +GL    G  G 
Sbjct: 609 RGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGP 668

Query: 78  VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             +   +     PG+ G    PG  G    PG +G
Sbjct: 669 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKG 703



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/113 (28%), Positives = 39/113 (34%), Gaps = 9/113 (7%)

Query: 53  DPGVRGLVAD------PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA 106
           DPG  GL+ +      PG+ G     G +G +  P       + G RGL    G RG   
Sbjct: 782 DPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 841

Query: 107 DPGVRGLAAALMVRGLVAAALMGCRQG-GSRRESGARCIRRPAGVTAAPETAG 158
             G RG        G   A   G   G G     G R +  P G    P   G
Sbjct: 842 PTGPRGQRGPRGATGKSGA--KGTSGGDGPHGPPGERGLPGPQGPNGFPGPKG 892



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/106 (30%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  G + + G  G    PG +GL           DPG  G     G  GL   PG RGL 
Sbjct: 934  GETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLP 993

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                  GL          G  GS  E GA     P G    P   G
Sbjct: 994  GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQG 1039



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG +G +   G  G+    G+ G    P V     + G +G V DPG +G   + G  G
Sbjct: 1050 PGEKGPIGPTGRDGVQGPVGLPGPAGPPGV---AGEDGDKGEVGDPGQKGTKGNKGEHG 1105



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 24/100 (24%), Positives = 37/100 (37%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   D   +G   +  + G++  P  +G   D  +      PG +G +  PG  G +   
Sbjct: 1399 GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPG 1458

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G  GL      +      G  G   + GV+G    PG  G
Sbjct: 1459 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPG 1498



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL   PG RG V   G +G    P    +V   G  G     G RG    PG  G 
Sbjct: 897 PGKDGLPGHPGQRGEV---GFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPG- 952

Query: 114 AAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                 +GL   A     +G     G+  + G   +R   G    P TAG
Sbjct: 953 -----EQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAG 997



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 33/111 (29%), Positives = 39/111 (35%), Gaps = 10/111 (9%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVV------RRLVADPGVRGLVADPGVRGLVAD 107
            PG +G   D G +G   +PG  G   DP        R      G RG   +PG  G    
Sbjct: 1251 PGPKGPTGDDGPKG---NPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1307

Query: 108  PGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             G  G    L  RG   +     RQGG   +     I  P G T     AG
Sbjct: 1308 TGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAP-GKTGPVGPAG 1357



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 3/86 (3%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGL---VADPGVRGLVADPVVRRLVADPGVRGLV 96
            G   DP         G  GL   PG RGL      PG++G             PG RG  
Sbjct: 964  GTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAA 1023

Query: 97   ADPGVRGLVADPGVRGLAAALMVRGL 122
               G  G    PG +G   A   +G+
Sbjct: 1024 GSGGPIGPPGRPGPQGPPGAAGEKGV 1049



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G    PG +G +   G  G+     +      PGV G   D   +G V DPG +G
Sbjct: 1041 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGD---KGEVGDPGQKG 1096



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 18/58 (31%), Positives = 23/58 (39%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G++GL    G +G   D G  G    P  R      G  G    PG  G +  PG +G
Sbjct: 1156 GLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG 1213



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 38   VRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVA 97
            +RG   +  +      PG++G     G  G    PG RG          +  PG  G   
Sbjct: 983  LRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGS---GGPIGPPGRPGPQG 1039

Query: 98   DPGVRGLVADPGVRG 112
             PG  G    PG +G
Sbjct: 1040 PPGAAGEKGVPGEKG 1054


>gi|239746652 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1513

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 13/186 (6%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+     V+G+  +  V+G+  +  V+ +  +  V+G+  +    G+  +    G+  
Sbjct: 999  VQGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGIAN 1058

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV------AAALMGCRQG 133
            +   + +  +   +G+  +  V+G+  +  V G+A  +   G+       A A     +G
Sbjct: 1059 EDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARG 1118

Query: 134  GSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDIQPKHGSQNERIRQ 193
             +   +             A E A HG+      + ++  D         HG  NE +  
Sbjct: 1119 IANEVAAQGIATEDVADGIANEDAAHGVANEDAAQAIAKPDAA-------HGIANEGVAN 1171

Query: 194  VLDSLG 199
             + + G
Sbjct: 1172 EVAAQG 1177



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 6/155 (3%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++   G+     V+G+  +   +G+  +   + +  +  V+G+  +  V G+  + 
Sbjct: 388 GIANEVATHGISKEDAVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEV 447

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA---AALMVRGLVAA---A 126
              G+  +  V+ +  +  V+G+  +  V+G+  +  V+G+A   AA  +   VAA   A
Sbjct: 448 AAHGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGIA 507

Query: 127 LMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
                QG +  ++        A    A E A HG+
Sbjct: 508 NEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGI 542



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 27/162 (16%), Positives = 69/162 (42%), Gaps = 3/162 (1%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G   +  V+G+      +G+  +  ++G+  +  V+ +  +  V+G+  +    G+  + 
Sbjct: 911  GISKEDAVQGIANEDAAQGIAKEDPIQGVANEVEVQGVAHEDAVQGIANEDAAHGIANED 970

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
              +G+  +   + +  +   +G+  +  V+G+  +  V+G+A    V+G+     +   Q
Sbjct: 971  AAQGIANEDAAQDIANEDAAQGIAKEDPVQGVANEDPVQGVANEDAVQGVANEVEV---Q 1027

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G +  ++        A    A E A HG+      + ++  D
Sbjct: 1028 GVAHEDAVQGIANEDAAHGIANEVAAHGIANEDAAQGIANED 1069



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 3/168 (1%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++ V+G+     V+G+  +    G+  +     +  +   +G+  +   +G+  + 
Sbjct: 1019 GVANEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIAHED 1078

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             V+G+  +  V  +  +    G+  +     +      RG+A  +  +G+   A      
Sbjct: 1079 AVQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGI---ATEDVAD 1135

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI 180
            G +  ++        A    A   A HG+   G    V+A      D+
Sbjct: 1136 GIANEDAAHGVANEDAAQAIAKPDAAHGIANEGVANEVAAQGIATEDV 1183



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 3/155 (1%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           V+G+       G+  +   +G+  +     +  +  V+G+  +   +G+  +   +G+  
Sbjct: 368 VQGVANEDAAHGVANEDAAQGIANEVATHGISKEDAVQGIANEDAAQGIANEDAAQGIAH 427

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
           +  V+ +  +  V G+  +    G+  +  V+G+A    V+G+     +   QG +  ++
Sbjct: 428 EDAVQGIANEDAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEV---QGVAHEDA 484

Query: 140 GARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                   A    A E A HG+      + ++  D
Sbjct: 485 VQGIANEDAAHGIANEVAAHGIANEDAAQGIANED 519



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 18/110 (16%), Positives = 49/110 (44%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G   ++   G+     V+G+  +  V+G+  +  V+ +  +  V+G+  +    G+  + 
Sbjct: 442 GVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEV 501

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              G+  +   + +  +   +G+  +  V+G+  +  V G+A  +   G+
Sbjct: 502 AAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGIAKEVAAHGV 551



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 33/177 (18%), Positives = 72/177 (40%), Gaps = 15/177 (8%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++   G+     V+G+  +   +G+  +   + +  +  V+G+  +  V G+  + 
Sbjct: 695 GIANEVAAHGISKEDAVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEV 754

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA---AALMVRGLVAA---- 125
              G+  +  V+ +  +  V+G+  +  V+G+  +  V+G+A   AA  +   VAA    
Sbjct: 755 AAHGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGITNEVAAHGIA 814

Query: 126 --------ALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                   A     QG +  ++        A  + A E A HG+        ++  D
Sbjct: 815 NEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPD 871



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 26/142 (18%), Positives = 61/142 (42%), Gaps = 3/142 (2%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+       G+  +   +G+  +   + +  +   +G+  +  V+G+  +  V+G+  
Sbjct: 954  VQGIANEDAAHGIANEDAAQGIANEDAAQDIANEDAAQGIAKEDPVQGVANEDPVQGVAN 1013

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
            +  V+ +  +  V+G+  +  V+G+  +    G+A  +   G+   A     QG +  ++
Sbjct: 1014 EDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGI---ANEDAAQGIANEDA 1070

Query: 140  GARCIRRPAGVTAAPETAGHGL 161
                    A    A E A HG+
Sbjct: 1071 AQGIAHEDAVQGIANEDAVHGV 1092



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 33/203 (16%), Positives = 75/203 (36%), Gaps = 26/203 (12%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++  +G+      +G+  +  V+G+  +     +  +    G+  +   +G+  + 
Sbjct: 185 GVANEVAAQGVANEDAAQGVANEDAVQGVANEDAAHGIANEVAAHGVANEDAAQGVANED 244

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             +G+  +  V  +  +   +G+  +    G+  +  V+G+     + G+VA        
Sbjct: 245 AAQGVANEDAVHGVANEDAAQGVAKEVTAHGVTNEDAVQGVVNQEALHGVVA-------- 296

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI------QPKHGS 186
                E  A+ I +P         + HG+   G    V+A      D+         HG 
Sbjct: 297 ----NEDAAQAIAKP--------DSAHGIANEGVANEVAAQGIATEDVADGIAEDAAHGI 344

Query: 187 QNERIRQVLDSLGKISSCSSQAA 209
            NE   Q +       S +++ A
Sbjct: 345 TNEEAAQAIAKQDAAHSITNEDA 367



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 25/149 (16%), Positives = 58/149 (38%), Gaps = 3/149 (2%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++  V+G+     V+G+  +  V+G+  +     +  +    G+  +   +G+  + 
Sbjct: 460 GVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGIANEDAAQGIANED 519

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             +G+  +  V+ +  +  V G+  +    G+  +     +A     RG+         Q
Sbjct: 520 AAQGIAHEDAVQGIANEDAVHGIAKEVAAHGVANEDAAHAIAKPDAARGIANEV---ATQ 576

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGL 161
           G + ++         A    A E A HG+
Sbjct: 577 GIATQDVADGIANEDAAHGVANEVAAHGI 605



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 27/162 (16%), Positives = 66/162 (40%), Gaps = 3/162 (1%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++    G+      +G+  +    G+  +  V+ +  +   +G+  +   +G+  + 
Sbjct: 370 GVANEDAAHGVANEDAAQGIANEVATHGISKEDAVQGIANEDAAQGIANEDAAQGIAHED 429

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
            V+G+  +  V  +  +    G+  +  V+G+  +  V+G+A  + V+G+   A     Q
Sbjct: 430 AVQGIANEDAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEVQGV---AHEDAVQ 486

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
           G +  ++        A    A E A  G+      + ++  D
Sbjct: 487 GIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGIAHED 528



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/162 (15%), Positives = 62/162 (38%), Gaps = 12/162 (7%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++ V+G+     V+G+  +    G+  +     +  +   +G+  +   +G+  + 
Sbjct: 776 GVANEVEVQGVAHEDAVQGIANEDAAHGITNEVAAHGIANEDAAQGIANEDAAQGIAHED 835

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
            V+G+  +  V  +  +    G+  +     +      RG+A  +  +G+    +     
Sbjct: 836 AVQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDV----A 891

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
            G   E  A  +        A E A HG+ +    + ++  D
Sbjct: 892 DGIANEDAAHGV--------ANEVAAHGISKEDAVQGIANED 925



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 26/154 (16%), Positives = 64/154 (41%), Gaps = 3/154 (1%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G+      +G+  +    G+  +  V+ +  +   +G+  +   +G+  +  V+G+  +
Sbjct: 685 QGIANEDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANE 744

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESG 140
             V  +  +    G+  +  V+G+  +  V+G+A  + V+G+   A     QG +  ++ 
Sbjct: 745 DAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEVQGV---AHEDAVQGIANEDAA 801

Query: 141 ARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                  A    A E A  G+      + ++  D
Sbjct: 802 HGITNEVAAHGIANEDAAQGIANEDAAQGIAHED 835



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 24/162 (14%), Positives = 64/162 (39%), Gaps = 3/162 (1%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++    +      +G+  +   +G+  +     +  +  V+G+  +   +G+  + 
Sbjct: 668 GIANEVAAHSIANEDAAQGIANEDAAQGIANEVAAHGISKEDAVQGIANEDAAQGIANED 727

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             +G+  +  V+ +  +  V G+  +    G+  +  V+G+A    V+G+     +   Q
Sbjct: 728 AAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANEDPVQGVANEDAVQGVANEVEV---Q 784

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
           G +  ++        A      E A HG+      + ++  D
Sbjct: 785 GVAHEDAVQGIANEDAAHGITNEVAAHGIANEDAAQGIANED 826



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 14/179 (7%)

Query: 24   VANS-VVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPV 82
            +AN    +G+  +  V+G+  +  V+ +  +  V+G+  +  V+G+  +  V+G+  +  
Sbjct: 984  IANEDAAQGIAKEDPVQGVANEDPVQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDA 1043

Query: 83   VRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL-----VAAALMGCRQGGSRR 137
               +  +    G+  +   +G+  +   +G+A    V+G+     V          G   
Sbjct: 1044 AHGIANEVAAHGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVAN 1103

Query: 138  ESGARCIRRP-AGVTAAPETAGHGLWRHGGHEMVSASDRCWMDIQPKHGSQNERIRQVL 195
            E  A  I +P A    A E A  G+      + ++  D         HG  NE   Q +
Sbjct: 1104 EDAAHAIAKPDAARGIANEVAAQGIATEDVADGIANEDAA-------HGVANEDAAQAI 1155



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 23/155 (14%), Positives = 61/155 (39%), Gaps = 6/155 (3%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++   G+      +G+  +   +G+  +  V  +  +  V+G+  +  V+G+    
Sbjct: 1239 GVANEVAAHGVANEDAAQGVANEVAAQGVANEDAVHGVANEDAVQGVANEVEVQGIAHKD 1298

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV------AAA 126
             ++G+  +   + +  +   +G+  +    G+  +    G+A  +  +G+         A
Sbjct: 1299 AIQGIANEDAAQGVANEDAAQGVANEVAAHGVANEDAAHGVANEVAAQGVANEDAAQGVA 1358

Query: 127  LMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
                  G +  ++     +  A    A E A HG+
Sbjct: 1359 NEVAVHGVANEDAARHMAKEDAAQDIANEDAAHGI 1393



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 16/95 (16%), Positives = 43/95 (45%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           V+G+     V+G+  +  V+G+  +  V+ +  +    G+  +    G+  +   +G+  
Sbjct: 458 VQGVANEDAVQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEVAAHGIANEDAAQGIAN 517

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           +   + +  +  V+G+  +  V G+  +    G+A
Sbjct: 518 EDAAQGIAHEDAVQGIANEDAVHGIAKEVAAHGVA 552



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 15/102 (14%), Positives = 46/102 (45%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++  +G+    V  G+  +    G+  +     +  +  V+G+  +   +G+  + 
Sbjct: 875 GIANEVAAQGIATEDVADGIANEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKED 934

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            ++G+  +  V+ +  +  V+G+  +    G+  +   +G+A
Sbjct: 935 PIQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEDAAQGIA 976



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 23/142 (16%), Positives = 56/142 (39%), Gaps = 3/142 (2%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            V+G+      + +       G+  +   + +  +   +G+  +    G+  +    G+  
Sbjct: 1192 VQGITNEEAAQAIAKQDAAHGITNEDAAQGVTNEVAAQGVANEDAAHGVANEVAAHGVAN 1251

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
            +   + +  +   +G+  +  V G+  +  V+G+A  + V+G+   A     QG +  ++
Sbjct: 1252 EDAAQGVANEVAAQGVANEDAVHGVANEDAVQGVANEVEVQGI---AHKDAIQGIANEDA 1308

Query: 140  GARCIRRPAGVTAAPETAGHGL 161
                    A    A E A HG+
Sbjct: 1309 AQGVANEDAAQGVANEVAAHGV 1330



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 7/180 (3%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  +++  +G+       G+  +    G+  +   + +  +   +G+  +  V G+  + 
Sbjct: 1221 GVTNEVAAQGVANEDAAHGVANEVAAHGVANEDAAQGVANEVAAQGVANEDAVHGVANED 1280

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             V+G+  +  V+ +     ++G+  +   +G+  +   +G+A  +   G+   A      
Sbjct: 1281 AVQGVANEVEVQGIAHKDAIQGIANEDAAQGVANEDAAQGVANEVAAHGV---ANEDAAH 1337

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMDI---QPKHGSQNE 189
            G +   +        A    A E A HG+        ++  D    DI      HG  NE
Sbjct: 1338 GVANEVAAQGVANEDAAQGVANEVAVHGVANEDAARHMAKEDAA-QDIANEDAAHGIANE 1396



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 16/102 (15%), Positives = 45/102 (44%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG+      +G+  + V  G+  +     +  +    G+  +  V+G+  +   +G+  +
Sbjct: 874 RGIANEVAAQGIATEDVADGIANEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKE 933

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
             ++ +  +  V+G+  +  V+G+  +    G+A     +G+
Sbjct: 934 DPIQGVANEVEVQGVAHEDAVQGIANEDAAHGIANEDAAQGI 975



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 23/149 (15%), Positives = 59/149 (39%), Gaps = 3/149 (2%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   + +       G+  +   +G+  +   + +  +    G+  +    G+  + 
Sbjct: 1194 GITNEEAAQAIAKQDAAHGITNEDAAQGVTNEVAAQGVANEDAAHGVANEVAAHGVANED 1253

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
              +G+  +   + +  +  V G+  +  V+G+  +  V+G+A    ++G+   A     Q
Sbjct: 1254 AAQGVANEVAAQGVANEDAVHGVANEDAVQGVANEVEVQGIAHKDAIQGI---ANEDAAQ 1310

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGL 161
            G +  ++        A    A E A HG+
Sbjct: 1311 GVANEDAAQGVANEVAAHGVANEDAAHGV 1339



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 24/149 (16%), Positives = 62/149 (41%), Gaps = 3/149 (2%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
            G  ++   +G+      + +  +   +G+  +  V+ +  +  V+G+  +  V+G+  + 
Sbjct: 965  GIANEDAAQGIANEDAAQDIANEDAAQGIAKEDPVQGVANEDPVQGVANEDAVQGVANEV 1024

Query: 73   GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             V+G+  +  V+ +  +    G+  +    G+  +   +G+A     +G+   A     Q
Sbjct: 1025 EVQGVAHEDAVQGIANEDAAHGIANEVAAHGIANEDAAQGIANEDAAQGI---AHEDAVQ 1081

Query: 133  GGSRRESGARCIRRPAGVTAAPETAGHGL 161
            G +  ++     +  A    A E A H +
Sbjct: 1082 GIANEDAVHGVAKEVAAHGVANEDAAHAI 1110



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 17/100 (17%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 24   VANSVV-RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPV 82
            VAN V   G+  +  V+G+  +   + +  +  ++G+  +  V+G+  +  V+G+  +  
Sbjct: 903  VANEVAAHGISKEDAVQGIANEDAAQGIAKEDPIQGVANEVEVQGVAHEDAVQGIANEDA 962

Query: 83   VRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
               +  +   +G+  +   + +  +   +G+A    V+G+
Sbjct: 963  AHGIANEDAAQGIANEDAAQDIANEDAAQGIAKEDPVQGV 1002



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 14/110 (12%), Positives = 45/110 (40%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++   + +        +  +  V+G+  +     +  +   +G+  +    G+  + 
Sbjct: 343 GITNEEAAQAIAKQDAAHSITNEDAVQGVANEDAAHGVANEDAAQGIANEVATHGISKED 402

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
            V+G+  +   + +  +   +G+  +  V+G+  +  V G+A  +   G+
Sbjct: 403 AVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGV 452



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 41/206 (19%), Positives = 75/206 (36%), Gaps = 22/206 (10%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL-- 77
            V+G+     V G+  +    G+  +     +      RG+  +   +G+  +    G+  
Sbjct: 1080 VQGIANEDAVHGVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDVADGIAN 1139

Query: 78   ------VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
                  VA+    + +A P     +A+ GV   VA    +G+A   +  G+   A+    
Sbjct: 1140 EDAAHGVANEDAAQAIAKPDAAHGIANEGVANEVA---AQGIATEDVADGIAEDAV---- 1192

Query: 132  QGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCW--MDIQPKHGSQNE 189
            QG +  E+     ++ A      E A  G+      + V+  D      +    HG  NE
Sbjct: 1193 QGITNEEAAQAIAKQDAAHGITNEDAAQGVTNEVAAQGVANEDAAHGVANEVAAHGVANE 1252

Query: 190  RIRQVLDSLGKISSCSSQAAGRLDAV 215
               Q     G  +  ++Q     DAV
Sbjct: 1253 DAAQ-----GVANEVAAQGVANEDAV 1273



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 15/190 (7%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G+     V+G+  +   +G+  +     +  +    G+  +   +G+  +   +G+  + 
Sbjct: 140 GITNEDAVQGVANEVAAQGVANEDAAHGVANEVAAHGVANEDAAQGVANEVAAQGVANED 199

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGA 141
             + +  +  V+G+  +    G+  +    G+A     +G+   A     QG +  ++  
Sbjct: 200 AAQGVANEDAVQGVANEDAAHGIANEVAAHGVANEDAAQGV---ANEDAAQGVANEDAVH 256

Query: 142 RCIRRPAGVTAAPETAGHGLWRHGG----------HEMVSASDRCWMDIQP--KHGSQNE 189
                 A    A E   HG+               H +V+  D      +P   HG  NE
Sbjct: 257 GVANEDAAQGVAKEVTAHGVTNEDAVQGVVNQEALHGVVANEDAAQAIAKPDSAHGIANE 316

Query: 190 RIRQVLDSLG 199
            +   + + G
Sbjct: 317 GVANEVAAQG 326



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 15/110 (13%), Positives = 45/110 (40%), Gaps = 1/110 (0%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  +++  +G+    V  G +A+    G+  +   + +        +  +  V+G+  + 
Sbjct: 317 GVANEVAAQGIATEDVADG-IAEDAAHGITNEEAAQAIAKQDAAHSITNEDAVQGVANED 375

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
              G+  +   + +  +    G+  +  V+G+  +   +G+A     +G+
Sbjct: 376 AAHGVANEDAAQGIANEVATHGISKEDAVQGIANEDAAQGIANEDAAQGI 425



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 13/99 (13%), Positives = 40/99 (40%)

Query: 24  VANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV 83
           +A     G+  +   + +        +  +  V+G+  +    G+  +   +G+  +   
Sbjct: 336 IAEDAAHGITNEEAAQAIAKQDAAHSITNEDAVQGVANEDAAHGVANEDAAQGIANEVAT 395

Query: 84  RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
             +  +  V+G+  +   +G+  +   +G+A    V+G+
Sbjct: 396 HGISKEDAVQGIANEDAAQGIANEDAAQGIAHEDAVQGI 434



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 27/190 (14%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGV-------------- 65
           V+G+V    + G+VA+      +A P     +A+ GV   VA  G+              
Sbjct: 282 VQGVVNQEALHGVVANEDAAQAIAKPDSAHGIANEGVANEVAAQGIATEDVADGIAEDAA 341

Query: 66  RGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAA 125
            G+  +   + +        +  +  V+G+  +    G+  +   +G+A  +   G+   
Sbjct: 342 HGITNEEAAQAIAKQDAAHSITNEDAVQGVANEDAAHGVANEDAAQGIANEVATHGISKE 401

Query: 126 -ALMG-----CRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASDRCWMD 179
            A+ G       QG +  ++        A    A E A HG+ +      V+  D     
Sbjct: 402 DAVQGIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGVAKEVAAHGVANED----- 456

Query: 180 IQPKHGSQNE 189
             P  G  NE
Sbjct: 457 --PVQGVANE 464



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/155 (14%), Positives = 56/155 (36%), Gaps = 3/155 (1%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           V+G+     V  +  +    G+  +     +      RG+  +   +G+  +    G+  
Sbjct: 837 VQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPDAARGIANEVAAQGIATEDVADGIAN 896

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRES 139
           +     +  +    G+  +  V+G+  +   +G+A    ++G+     +   QG +  ++
Sbjct: 897 EDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKEDPIQGVANEVEV---QGVAHEDA 953

Query: 140 GARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
                   A    A E A  G+      + ++  D
Sbjct: 954 VQGIANEDAAHGIANEDAAQGIANEDAAQDIANED 988



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 24/162 (14%), Positives = 57/162 (35%), Gaps = 3/162 (1%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++   +G+     V+G+  +  V  +  +     +  +     +      RG+  + 
Sbjct: 821 GIANEDAAQGIAHEDAVQGIANEDAVHSVAKEVAAHGVANEDAAHAIAKPDAARGIANEV 880

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQ 132
             +G+  + V   +  +    G+  +    G+  +  V+G+A     +G+     +   Q
Sbjct: 881 AAQGIATEDVADGIANEDAAHGVANEVAAHGISKEDAVQGIANEDAAQGIAKEDPI---Q 937

Query: 133 GGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGHEMVSASD 174
           G +            A    A E A HG+      + ++  D
Sbjct: 938 GVANEVEVQGVAHEDAVQGIANEDAAHGIANEDAAQGIANED 979



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 22/165 (13%)

Query: 13   GWGSDLVVRGMVANSVVRGMVADPVVRGL--------VADPVVRRLVADPGVRGLVADPG 64
            G  +++  +G+    V  G+  +    G+        +A P     +A+ GV   VA  G
Sbjct: 1118 GIANEVAAQGIATEDVADGIANEDAAHGVANEDAAQAIAKPDAAHGIANEGVANEVAAQG 1177

Query: 65   -----VRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA---AA 116
                 V   +A+  V+G+  +   + +       G+  +   +G+  +   +G+A   AA
Sbjct: 1178 IATEDVADGIAEDAVQGITNEEAAQAIAKQDAAHGITNEDAAQGVTNEVAAQGVANEDAA 1237

Query: 117  LMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGL 161
              V   VAA       G +  ++        A    A E A HG+
Sbjct: 1238 HGVANEVAA------HGVANEDAAQGVANEVAAQGVANEDAVHGV 1276



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 7/162 (4%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           V+G+     V G+  +    G+  +     +      RG+  +   +G+       G+  
Sbjct: 530 VQGIANEDAVHGIAKEVAAHGVANEDAAHAIAKPDAARGIANEVATQGIATQDVADGIAN 589

Query: 80  DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLV-AAALMG-----CRQG 133
           +     +  +    G+  +  V  +  +   +G+A  +   G+    A+ G         
Sbjct: 590 EDAAHGVANEVAAHGIANEVAVHCVAIEDAAQGVAKEVTAHGVANEDAVQGVVNEYALHS 649

Query: 134 GSRRESGARCIRRP-AGVTAAPETAGHGLWRHGGHEMVSASD 174
               E  A+ I +P A    A E A H +      + ++  D
Sbjct: 650 VVANEDAAQAIAKPDAAHGIANEVAAHSIANEDAAQGIANED 691



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 14/107 (13%), Positives = 39/107 (36%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++   +G+      +G+  +  V+G+  +  V  +  +    G+  +     +    
Sbjct: 505 GIANEDAAQGIANEDAAQGIAHEDAVQGIANEDAVHGIAKEVAAHGVANEDAAHAIAKPD 564

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMV 119
             RG+  +   + +       G+  +    G+  +    G+A  + V
Sbjct: 565 AARGIANEVATQGIATQDVADGIANEDAAHGVANEVAAHGIANEVAV 611



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/110 (13%), Positives = 40/110 (36%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 72
           G  ++   +G+     V+G+  +  V G+  +     +  +     +      RG+  + 
Sbjct: 514 GIANEDAAQGIAHEDAVQGIANEDAVHGIAKEVAAHGVANEDAAHAIAKPDAARGIANEV 573

Query: 73  GVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGL 122
             +G+    V   +  +    G+  +    G+  +  V  +A     +G+
Sbjct: 574 ATQGIATQDVADGIANEDAAHGVANEVAAHGIANEVAVHCVAIEDAAQGV 623


>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
          Length = 1497

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G     G++GL  + G+ G+  D   +  +  PG +G   + G RGL  +PG+RGL
Sbjct: 673 PGPQGPPGPVGLQGLRGEVGLPGVKGD---KGPMGPPGPKGDQGEKGPRGLTGEPGMRGL 729

Query: 114 AAAL---MVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
             A+     +G +  A     QG  G +  +G   IR P G +  P   G
Sbjct: 730 PGAVGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPG 779



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 9/110 (8%)

Query: 22  GMVANSVVRGMVADPVVRG---LVADPVVRRLVADPGVRGLVADPGVRGL---VADPGVR 75
           G V    +RG V  P V+G    +  P  +    + G RGL  +PG+RGL   V +PG +
Sbjct: 680 GPVGLQGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVGEPGAK 739

Query: 76  GLVADPVVRRLVADPGVRGLVADPGVR---GLVADPGVRGLAAALMVRGL 122
           G +            G +GL   PG+R   G   DPG  GL      +GL
Sbjct: 740 GAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQGL 789



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 30  RGMVADPVVRGL---VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA---DPVV 83
           RG+  +P +RGL   V +P  +  +   G  G     G +GL   PG+RG      DP  
Sbjct: 718 RGLTGEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGK 777

Query: 84  RRLVADPGVRGLVADPGVRGLVADPGVRG 112
             L    G +GL   PG  G+  +PG  G
Sbjct: 778 PGLTGPQGPQGLPGTPGRPGIKGEPGAPG 806



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 30  RGMVADPVVRGLVA---DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL 86
           +G+   P +RG      DP    L    G +GL   PG  G+  +PG  G +       +
Sbjct: 757 QGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQGLPGTPGRPGIKGEPGAPGKIVTSEGSSM 816

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGLA 114
           +  PG  G    PG  G    PG  G A
Sbjct: 817 LTVPGPPG---PPGAMGPPGPPGAPGPA 841



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 10/110 (9%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L   PG +G +  PG +G    PG  G+         +  PG +G     G +G V DPG
Sbjct: 565 LRGSPGPKGDMGSPGPKGDRGFPGTPGIPGP------LGHPGPQG---PKGQKGSVGDPG 615

Query: 110 VRGLAAALMVRG-LVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           + G        G +      G    G + E GA     P G    P + G
Sbjct: 616 MEGPMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPPGVPGSVG 665



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 48  RRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRG---L 104
           R    +PG  G    PGV G V   G  G          V   G+RG V  PGV+G    
Sbjct: 646 RGAAGEPGPHG---PPGVPGSVGPKGSSGSPGPQGPPGPVGLQGLRGEVGLPGVKGDKGP 702

Query: 105 VADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
           +  PG +G       RGL     M     G+  E GA+    PAG
Sbjct: 703 MGPPGPKGDQGEKGPRGLTGEPGMR-GLPGAVGEPGAKGAMGPAG 746



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 38/143 (26%), Positives = 53/143 (37%), Gaps = 30/143 (20%)

Query: 30  RGMVADPVVRGLVAD-----PVVRRLVADP------GVRGLVADPGVRGLVADPGVRGLV 78
           +G V DP + G +       P+  R  A P      G RG   +PG  G    PGV G V
Sbjct: 608 KGSVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHG---PPGVPGSV 664

Query: 79  ADPVVRRLVADPGVRGLVADPGVRGLVAD---PGVRGLAAALMVRGLVAAALMGCRQGGS 135
                +     PG +G     G++GL  +   PGV+G    +   G            G 
Sbjct: 665 GP---KGSSGSPGPQGPPGPVGLQGLRGEVGLPGVKGDKGPMGPPG----------PKGD 711

Query: 136 RRESGARCIRRPAGVTAAPETAG 158
           + E G R +    G+   P   G
Sbjct: 712 QGEKGPRGLTGEPGMRGLPGAVG 734



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G +  PG  G     G  GL     V  L   PG  G    PG   +   PG RG
Sbjct: 823 PGPPGAMGPPGPPGAPGPAGPAGLPGHQEVLNLQGPPGPPGPRGPPG-PSIPGPPGPRG 880


>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
            sapiens]
          Length = 1818

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 28/94 (29%), Positives = 39/94 (41%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            + G V    + G        G +  P +  L  DPG +G    PG+ GL+  PG +G   
Sbjct: 1424 IPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKG 1483

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            D  +      PG +G    PG  G +  PG  GL
Sbjct: 1484 DRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGL 1517



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 26/82 (31%), Positives = 36/82 (43%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G +  P + GL  DP  +     PG+ GL+  PG +G   D G+ G    P  +     P
Sbjct: 1444 GPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 1503

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  G +  PG  GL    G +G
Sbjct: 1504 GPAGPLGPPGPPGLPGPQGPKG 1525



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G     G +G +  PG +G +  P  R +    GVRGL    G +G    PG +G 
Sbjct: 744 PGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGD 803

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 RG V        Q G R E G    +  AG T  P  +G
Sbjct: 804 MGLKGDRGEVG-------QIGPRGEDGPEGPKGRAGPTGDPGPSG 841



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/71 (30%), Positives = 33/71 (46%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V + G+ G     G  G +  PG+ GL  DP  +     PG+ GL+  PG +G   D G+
Sbjct: 1428 VGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGL 1487

Query: 111  RGLAAALMVRG 121
             G   +   +G
Sbjct: 1488 PGTQGSPGAKG 1498



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/58 (34%), Positives = 29/58 (50%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G+ G V + G+ G     G  G +  P +  L  DPG +G    PG+ GL+  PG +G
Sbjct: 1423 GIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1480



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G + +P  +    D G  G    PG++G V  PG+ G   +P  R      G+ G   D
Sbjct: 1140 KGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPR---GQQGMFGQKGD 1196

Query: 99   PGVRGLVADPGVRGL 113
             G RG    PG  GL
Sbjct: 1197 EGARGFPGPPGPIGL 1211



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P  R  V  PV   L    G  G   + G +G + +PG +G   D         PG++G 
Sbjct: 1112 PAGRDGVQGPV--GLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGP 1169

Query: 96   VADPGVRGLVADPGVRG 112
            V  PG+ G   +PG RG
Sbjct: 1170 VGAPGIAGGDGEPGPRG 1186



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 28/92 (30%), Positives = 37/92 (40%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RGM      +G      + GL  D   R      G  G   D G+RG   + G RGL  +
Sbjct: 600 RGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGE 659

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
              R L+   G  G    PG+ G+   PG +G
Sbjct: 660 AGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKG 691



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G      V+G V  P   G    P       + G +G + +PG +G   D G  G    
Sbjct: 1110 QGPAGRDGVQGPVGLPGPAGPAGSP------GEDGDKGEIGEPGQKGSKGDKGENGPPGP 1163

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            P ++  V  PG+ G   +PG RG     G +G
Sbjct: 1164 PGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1195



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 39/130 (30%), Positives = 48/130 (36%), Gaps = 13/130 (10%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG+   P   G    P  R      G RG+  +PG +G     G+ GL  D   R     
Sbjct: 576 RGVQGPP---GPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 632

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            G  G   D G+RG   + G RGL      RGL+          G R   GA      AG
Sbjct: 633 QGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL----------GPRGTPGAPGQPGMAG 682

Query: 150 VTAAPETAGH 159
           V   P   G+
Sbjct: 683 VDGPPGPKGN 692



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/82 (29%), Positives = 33/82 (40%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G+  DP  +G    P +  L+  PG +G   D G+ G    PG +G    P     +  P
Sbjct: 1453 GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP 1512

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  GL    G +G     G  G
Sbjct: 1513 GPPGLPGPQGPKGNKGSTGPAG 1534



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 2/106 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  G + + G  G    PG +GL           DPG +G+    G  GL   PG RGL 
Sbjct: 988  GETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLP 1047

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
             A    GL          G  GS  E G+     P G+   P   G
Sbjct: 1048 GAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1093



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  GL   PG  G    PG  G    P     +  PG+ GL  DPG +G    PG+ GL
Sbjct: 1416 PGPEGLRGIPGPVGEQGLPGAAGQDGPPGP---MGPPGLPGLKGDPGSKGEKGHPGLIGL 1472

Query: 114  AAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                  +G      +   QG  G++ + G   I  PAG    P   G
Sbjct: 1473 IGPPGEQGEKGDRGLPGTQGSPGAKGDGG---IPGPAGPLGPPGPPG 1516



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 20/60 (33%), Positives = 28/60 (46%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G+RG   + G RGL  + G RGL+           PG+ G+   PG +G +   G  G
Sbjct: 641 DDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPG 700



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLV 69
           G   ++  RG+   +  RG++      G    P +  +   PG +G +    +PG  G  
Sbjct: 646 GEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 705

Query: 70  ADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG +GL   P  +  +  PG +G    PG+ GL   PG  G
Sbjct: 706 GNPGPQGL---PGPQGPIGPPGEKGPQGKPGLAGL---PGADG 742



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA------DPGV 74
            +G +     +G   D    G    P ++  V  PG+ G   +PG RG         D G 
Sbjct: 1140 KGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGA 1199

Query: 75   RGLVADPV---VRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            RG    P    ++ L   PG +G   D G  G    PG RG
Sbjct: 1200 RGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRG 1240



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG    +   G+   P  +G       +    + G +G     GV+G V  PG  G    
Sbjct: 1074 RGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS 1133

Query: 81   PVV---RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GS 135
            P     +  + +PG +G   D G  G    PG++G   A  + G         +QG  G 
Sbjct: 1134 PGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQ 1193

Query: 136  RRESGARCIRRPAG 149
            + + GAR    P G
Sbjct: 1194 KGDEGARGFPGPPG 1207



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           DPG +G     G  G    PG RG       R +  +PG +G     G+ GL  D G RG
Sbjct: 569 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG 628

Query: 113 LAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                   G      M    G     G   E+G R +  P G   AP   G
Sbjct: 629 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPG 679



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLV--- 87
           G   D  +RG   +   R L  + G RGL+   G  G    PG+ G+   P  +  +   
Sbjct: 637 GPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 696

Query: 88  ADPGVRGLVADPGVRGL------VADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRES 139
            +PG  G   +PG +GL      +  PG +G      + GL  A       G  G   E 
Sbjct: 697 GEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK 756

Query: 140 GARCIRRPAGVTAAPETAG 158
           GA     P G    P   G
Sbjct: 757 GALGPPGPQGPIGYPGPRG 775



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 14/142 (9%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G    S  +G +  P  +G +  P  R +    GVRGL    G +G    PG +G +   
Sbjct: 748 GKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLK 807

Query: 82  VVRRLVADPGVRGLVADPGVRGL---VADPGVRGLAAALMVRGLVAAALMGCRQG----- 133
             R  V   G RG     G +G      DPG  G A      G+        RQG     
Sbjct: 808 GDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGST 867

Query: 134 ------GSRRESGARCIRRPAG 149
                 G+  E GAR +    G
Sbjct: 868 GFPGFPGANGEKGARGVAGKPG 889



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V  PG +G    PG  GL   PG RG            + G +G    PG  G+V   G 
Sbjct: 939  VGFPGPKGPPGPPGKDGLPGHPGQRG------------ETGFQGKTGPPGPGGVVGPQGP 986

Query: 111  RGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
             G    +  RG          QG  G+  + GA+    P G++     AG
Sbjct: 987  TGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1036



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 21/59 (35%), Positives = 25/59 (42%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG +GL    G  G   DPG +G+        L   PG RGL    G  GL    G +G
Sbjct: 1005 PGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQG 1063



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 24/91 (26%), Positives = 35/91 (38%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  +   +G    P + GL+  P  +    D G+ G    PG +G    PG  G +  P
Sbjct: 1453 GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP 1512

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                L    G +G     G  G   D G+ G
Sbjct: 1513 GPPGLPGPQGPKGNKGSTGPAGQKGDSGLPG 1543



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 51  VADPG--VRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 108
           V +PG  V G     G  G++  PG++G    P       DPG RG    PG+ G    P
Sbjct: 445 VVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPP------GDPGDRGPPGRPGLPGADGLP 498

Query: 109 GVRGLAAALMVR 120
           G  G    L  R
Sbjct: 499 GPPGTMLMLPFR 510



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G+   +   G   DP  +G+        L   PG RGL   PG +G    PG++G    
Sbjct: 1008 QGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGL---PGAQGA---PGLKGGEGP 1061

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                  V  PG RG     G  GL   PG +G
Sbjct: 1062 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1093



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 22/106 (20%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL   PG  G     G +G   DP         G RG+   PG  G    PG RG 
Sbjct: 543 PGPMGLTGRPGPVGGPGSSGAKGESGDP------GPQGPRGVQGPPGPTG---KPGKRGR 593

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGH 159
             A   RG+               E GA+  R   G+   P   GH
Sbjct: 594 PGADGGRGMPG-------------EPGAKGDRGFDGLPGLPGDKGH 626



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 20/63 (31%), Positives = 25/63 (39%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L   PG  G     G +G   DPG +G             PG RG     G RG+  +PG
Sbjct: 548 LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPG 607

Query: 110 VRG 112
            +G
Sbjct: 608 AKG 610



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 13/104 (12%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G   DPG  G   + G  G+   P +       G +G    PG  G   + G RG+A
Sbjct: 829 GRAGPTGDPGPSGQAGEKGKLGV---PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVA 885

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                RG          Q G     G+R  R P G      T+G
Sbjct: 886 GKPGPRG----------QRGPTGPRGSRGARGPTGKPGPKGTSG 919



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 21/66 (31%), Positives = 27/66 (40%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V  PG RG     G  GL   PG +G       +    + G +G     GV+G V  PG 
Sbjct: 1068 VGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGP 1127

Query: 111  RGLAAA 116
             G A +
Sbjct: 1128 AGPAGS 1133



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G V  P  RG         L   PG +G     G +G   + G +G      V+  V  P
Sbjct: 1066 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP 1125

Query: 91   GVRGLVADPGV---RGLVADPGVRG 112
            G  G    PG    +G + +PG +G
Sbjct: 1126 GPAGPAGSPGEDGDKGEIGEPGQKG 1150



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 2/106 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G++GL   PG +G   D G  G    P  R      G  G    PG  G V   G +G  
Sbjct: 1210 GLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEP 1269

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                  G    A +G  +G  G + E+G      P G    P   G
Sbjct: 1270 GEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDG 1315



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/70 (31%), Positives = 29/70 (41%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG++G     G  G V  PG RG         L   PG +G     G +G   + G +G 
Sbjct: 1053 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1112

Query: 114  AAALMVRGLV 123
            A    V+G V
Sbjct: 1113 AGRDGVQGPV 1122



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 40/132 (30%), Positives = 49/132 (37%), Gaps = 17/132 (12%)

Query: 12   AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
            AG G     RG    +   G    P  +G   D   +    +PG  G   DPG  G    
Sbjct: 1281 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPK---GNPGPVGFPGDPGPPGEPGP 1337

Query: 72   PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
             G  G+  D   +    DPG  G    PG  G    PG  G       RG   AA    R
Sbjct: 1338 AGQDGVGGD---KGEDGDPGQPG---PPGPSGEAGPPGPPG------KRGPPGAAGAEGR 1385

Query: 132  QG--GSRRESGA 141
            QG  G++ E+GA
Sbjct: 1386 QGEKGAKGEAGA 1397



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/82 (26%), Positives = 30/82 (36%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G++  P  +G   D  +      PG +G    PG  G +  PG  GL      +      
Sbjct: 1471 GLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGST 1530

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  G   D G+ G    PG  G
Sbjct: 1531 GPAGQKGDSGLPGPPGSPGPPG 1552



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 13/122 (10%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P  R      G  GL   PG +G     G +G   +   +      GV+G V  P
Sbjct: 1066 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP 1125

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV---TAAPET 156
            G  G    PG  G    +   G          Q GS+ + G      P G+     AP  
Sbjct: 1126 GPAGPAGSPGEDGDKGEIGEPG----------QKGSKGDKGENGPPGPPGLQGPVGAPGI 1175

Query: 157  AG 158
            AG
Sbjct: 1176 AG 1177



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG---VRGLVADPVVRR 85
            ++G V  P + G   +P  R      G+ G   D G RG    PG   ++GL   P  + 
Sbjct: 1166 LQGPVGAPGIAGGDGEPGPR---GQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKG 1222

Query: 86   LVADPGVRGLVADPGVRGLVADPGVRG 112
               D G  G    PG RG     G  G
Sbjct: 1223 ENGDVGPMGPPGPPGPRGPQGPNGADG 1249



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G+    G RG   + G  G    P  +    D G +G   +PG  G   DPG  G
Sbjct: 1278 PGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKG---NPGPVGFPGDPGPPG 1333



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 35/123 (28%), Positives = 47/123 (38%), Gaps = 16/123 (13%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G V  P  +     PG  GL   PG RG   + G +G    P    +V   G  G    
Sbjct: 936  QGPVGFPGPKGPPGPPGKDGLPGHPGQRG---ETGFQGKTGPPGPGGVVGPQGPTGETGP 992

Query: 99   PGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIR---RPAGVTAAPE 155
             G RG    PG  G       +GL  AA     + G++ + G + I     PAG+   P 
Sbjct: 993  IGERGHPGPPGPPG------EQGLPGAA----GKEGAKGDPGPQGISGKDGPAGLRGFPG 1042

Query: 156  TAG 158
              G
Sbjct: 1043 ERG 1045



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/84 (26%), Positives = 32/84 (38%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            +RG   +  + G    P ++      G  G V  PG RG     G  GL   P  +    
Sbjct: 1037 LRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPG 1096

Query: 89   DPGVRGLVADPGVRGLVADPGVRG 112
              G +G   + G +G     GV+G
Sbjct: 1097 PAGEKGAPGEKGPQGPAGRDGVQG 1120



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG+ G     G +G    PG  G   +   R +   PG RG     G RG     G RG
Sbjct: 852 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG---SRGARG 907



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 22/118 (18%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL------------VADPGVR 102
            G  G    PG  G V   G  G      +R +    G +GL            +  PG+ 
Sbjct: 1393 GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP 1452

Query: 103  GLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHG 160
            GL  DPG +G      + GL+          G   E G +  R   G   +P   G G
Sbjct: 1453 GLKGDPGSKGEKGHPGLIGLI----------GPPGEQGEKGDRGLPGTQGSPGAKGDG 1500



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG RG     G  G   + G +G             PG  G V   G  G     G+RG+
Sbjct: 1371 PGKRGPPGAAGAEGRQGEKGAKGEAGAE------GPPGKTGPVGPQGPAGKPGPEGLRGI 1424

Query: 114  AAALMVRGLVAAA 126
               +  +GL  AA
Sbjct: 1425 PGPVGEQGLPGAA 1437


>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
            sapiens]
          Length = 1767

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 28/94 (29%), Positives = 39/94 (41%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            + G V    + G        G +  P +  L  DPG +G    PG+ GL+  PG +G   
Sbjct: 1373 IPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKG 1432

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            D  +      PG +G    PG  G +  PG  GL
Sbjct: 1433 DRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGL 1466



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 26/82 (31%), Positives = 36/82 (43%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G +  P + GL  DP  +     PG+ GL+  PG +G   D G+ G    P  +     P
Sbjct: 1393 GPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 1452

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  G +  PG  GL    G +G
Sbjct: 1453 GPAGPLGPPGPPGLPGPQGPKG 1474



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G     G +G +  PG +G +  P  R +    GVRGL    G +G    PG +G 
Sbjct: 693 PGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGD 752

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 RG V        Q G R E G    +  AG T  P  +G
Sbjct: 753 MGLKGDRGEVG-------QIGPRGEDGPEGPKGRAGPTGDPGPSG 790



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/71 (30%), Positives = 33/71 (46%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V + G+ G     G  G +  PG+ GL  DP  +     PG+ GL+  PG +G   D G+
Sbjct: 1377 VGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGL 1436

Query: 111  RGLAAALMVRG 121
             G   +   +G
Sbjct: 1437 PGTQGSPGAKG 1447



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/58 (34%), Positives = 29/58 (50%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G+ G V + G+ G     G  G +  P +  L  DPG +G    PG+ GL+  PG +G
Sbjct: 1372 GIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1429



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G + +P  +    D G  G    PG++G V  PG+ G   +P  R      G+ G   D
Sbjct: 1089 KGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPR---GQQGMFGQKGD 1145

Query: 99   PGVRGLVADPGVRGL 113
             G RG    PG  GL
Sbjct: 1146 EGARGFPGPPGPIGL 1160



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P  R  V  PV   L    G  G   + G +G + +PG +G   D         PG++G 
Sbjct: 1061 PAGRDGVQGPV--GLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGP 1118

Query: 96   VADPGVRGLVADPGVRG 112
            V  PG+ G   +PG RG
Sbjct: 1119 VGAPGIAGGDGEPGPRG 1135



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 28/92 (30%), Positives = 37/92 (40%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RGM      +G      + GL  D   R      G  G   D G+RG   + G RGL  +
Sbjct: 549 RGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGE 608

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
              R L+   G  G    PG+ G+   PG +G
Sbjct: 609 AGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKG 640



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G      V+G V  P   G    P       + G +G + +PG +G   D G  G    
Sbjct: 1059 QGPAGRDGVQGPVGLPGPAGPAGSP------GEDGDKGEIGEPGQKGSKGDKGENGPPGP 1112

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            P ++  V  PG+ G   +PG RG     G +G
Sbjct: 1113 PGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1144



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 39/130 (30%), Positives = 48/130 (36%), Gaps = 13/130 (10%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG+   P   G    P  R      G RG+  +PG +G     G+ GL  D   R     
Sbjct: 525 RGVQGPP---GPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 581

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            G  G   D G+RG   + G RGL      RGL+          G R   GA      AG
Sbjct: 582 QGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL----------GPRGTPGAPGQPGMAG 631

Query: 150 VTAAPETAGH 159
           V   P   G+
Sbjct: 632 VDGPPGPKGN 641



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/82 (29%), Positives = 33/82 (40%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G+  DP  +G    P +  L+  PG +G   D G+ G    PG +G    P     +  P
Sbjct: 1402 GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP 1461

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  GL    G +G     G  G
Sbjct: 1462 GPPGLPGPQGPKGNKGSTGPAG 1483



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 2/106 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  G + + G  G    PG +GL           DPG +G+    G  GL   PG RGL 
Sbjct: 937  GETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLP 996

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
             A    GL          G  GS  E G+     P G+   P   G
Sbjct: 997  GAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1042



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  GL   PG  G    PG  G    P     +  PG+ GL  DPG +G    PG+ GL
Sbjct: 1365 PGPEGLRGIPGPVGEQGLPGAAGQDGPPGP---MGPPGLPGLKGDPGSKGEKGHPGLIGL 1421

Query: 114  AAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                  +G      +   QG  G++ + G   I  PAG    P   G
Sbjct: 1422 IGPPGEQGEKGDRGLPGTQGSPGAKGDGG---IPGPAGPLGPPGPPG 1465



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 20/60 (33%), Positives = 28/60 (46%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G+RG   + G RGL  + G RGL+           PG+ G+   PG +G +   G  G
Sbjct: 590 DDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPG 649



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLV 69
           G   ++  RG+   +  RG++      G    P +  +   PG +G +    +PG  G  
Sbjct: 595 GEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 654

Query: 70  ADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG +GL   P  +  +  PG +G    PG+ GL   PG  G
Sbjct: 655 GNPGPQGL---PGPQGPIGPPGEKGPQGKPGLAGL---PGADG 691



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA------DPGV 74
            +G +     +G   D    G    P ++  V  PG+ G   +PG RG         D G 
Sbjct: 1089 KGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGA 1148

Query: 75   RGLVADPV---VRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            RG    P    ++ L   PG +G   D G  G    PG RG
Sbjct: 1149 RGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRG 1189



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG    +   G+   P  +G       +    + G +G     GV+G V  PG  G    
Sbjct: 1023 RGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS 1082

Query: 81   PVV---RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GS 135
            P     +  + +PG +G   D G  G    PG++G   A  + G         +QG  G 
Sbjct: 1083 PGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQ 1142

Query: 136  RRESGARCIRRPAG 149
            + + GAR    P G
Sbjct: 1143 KGDEGARGFPGPPG 1156



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           DPG +G     G  G    PG RG       R +  +PG +G     G+ GL  D G RG
Sbjct: 518 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG 577

Query: 113 LAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                   G      M    G     G   E+G R +  P G   AP   G
Sbjct: 578 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPG 628



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLV--- 87
           G   D  +RG   +   R L  + G RGL+   G  G    PG+ G+   P  +  +   
Sbjct: 586 GPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 645

Query: 88  ADPGVRGLVADPGVRGL------VADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRES 139
            +PG  G   +PG +GL      +  PG +G      + GL  A       G  G   E 
Sbjct: 646 GEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK 705

Query: 140 GARCIRRPAGVTAAPETAG 158
           GA     P G    P   G
Sbjct: 706 GALGPPGPQGPIGYPGPRG 724



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 14/142 (9%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G    S  +G +  P  +G +  P  R +    GVRGL    G +G    PG +G +   
Sbjct: 697 GKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLK 756

Query: 82  VVRRLVADPGVRGLVADPGVRGL---VADPGVRGLAAALMVRGLVAAALMGCRQG----- 133
             R  V   G RG     G +G      DPG  G A      G+        RQG     
Sbjct: 757 GDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGST 816

Query: 134 ------GSRRESGARCIRRPAG 149
                 G+  E GAR +    G
Sbjct: 817 GFPGFPGANGEKGARGVAGKPG 838



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           V  PG +G    PG  GL   PG RG            + G +G    PG  G+V   G 
Sbjct: 888 VGFPGPKGPPGPPGKDGLPGHPGQRG------------ETGFQGKTGPPGPGGVVGPQGP 935

Query: 111 RGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
            G    +  RG          QG  G+  + GA+    P G++     AG
Sbjct: 936 TGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 985



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 21/59 (35%), Positives = 25/59 (42%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG +GL    G  G   DPG +G+        L   PG RGL    G  GL    G +G
Sbjct: 954  PGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQG 1012



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 24/91 (26%), Positives = 35/91 (38%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  +   +G    P + GL+  P  +    D G+ G    PG +G    PG  G +  P
Sbjct: 1402 GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP 1461

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                L    G +G     G  G   D G+ G
Sbjct: 1462 GPPGLPGPQGPKGNKGSTGPAGQKGDSGLPG 1492



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 51  VADPG--VRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 108
           V +PG  V G     G  G++  PG++G    P       DPG RG    PG+ G    P
Sbjct: 394 VVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPP------GDPGDRGPPGRPGLPGADGLP 447

Query: 109 GVRGLAAALMVR 120
           G  G    L  R
Sbjct: 448 GPPGTMLMLPFR 459



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G+   +   G   DP  +G+        L   PG RGL   PG +G    PG++G    
Sbjct: 957  QGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGL---PGAQGA---PGLKGGEGP 1010

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                  V  PG RG     G  GL   PG +G
Sbjct: 1011 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1042



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 22/106 (20%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL   PG  G     G +G   DP         G RG+   PG  G    PG RG 
Sbjct: 492 PGPMGLTGRPGPVGGPGSSGAKGESGDP------GPQGPRGVQGPPGPTG---KPGKRGR 542

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGH 159
             A   RG+               E GA+  R   G+   P   GH
Sbjct: 543 PGADGGRGMPG-------------EPGAKGDRGFDGLPGLPGDKGH 575



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 20/63 (31%), Positives = 25/63 (39%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L   PG  G     G +G   DPG +G             PG RG     G RG+  +PG
Sbjct: 497 LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPG 556

Query: 110 VRG 112
            +G
Sbjct: 557 AKG 559



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 13/104 (12%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G   DPG  G   + G  G+   P +       G +G    PG  G   + G RG+A
Sbjct: 778 GRAGPTGDPGPSGQAGEKGKLGV---PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVA 834

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                RG          Q G     G+R  R P G      T+G
Sbjct: 835 GKPGPRG----------QRGPTGPRGSRGARGPTGKPGPKGTSG 868



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 21/66 (31%), Positives = 27/66 (40%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V  PG RG     G  GL   PG +G       +    + G +G     GV+G V  PG 
Sbjct: 1017 VGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGP 1076

Query: 111  RGLAAA 116
             G A +
Sbjct: 1077 AGPAGS 1082



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G V  P  RG         L   PG +G     G +G   + G +G      V+  V  P
Sbjct: 1015 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP 1074

Query: 91   GVRGLVADPGV---RGLVADPGVRG 112
            G  G    PG    +G + +PG +G
Sbjct: 1075 GPAGPAGSPGEDGDKGEIGEPGQKG 1099



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 2/106 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G++GL   PG +G   D G  G    P  R      G  G    PG  G V   G +G  
Sbjct: 1159 GLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEP 1218

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                  G    A +G  +G  G + E+G      P G    P   G
Sbjct: 1219 GEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDG 1264



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/70 (31%), Positives = 29/70 (41%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG++G     G  G V  PG RG         L   PG +G     G +G   + G +G 
Sbjct: 1002 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1061

Query: 114  AAALMVRGLV 123
            A    V+G V
Sbjct: 1062 AGRDGVQGPV 1071



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 40/132 (30%), Positives = 49/132 (37%), Gaps = 17/132 (12%)

Query: 12   AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
            AG G     RG    +   G    P  +G   D   +    +PG  G   DPG  G    
Sbjct: 1230 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPK---GNPGPVGFPGDPGPPGEPGP 1286

Query: 72   PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
             G  G+  D   +    DPG  G    PG  G    PG  G       RG   AA    R
Sbjct: 1287 AGQDGVGGD---KGEDGDPGQPG---PPGPSGEAGPPGPPG------KRGPPGAAGAEGR 1334

Query: 132  QG--GSRRESGA 141
            QG  G++ E+GA
Sbjct: 1335 QGEKGAKGEAGA 1346



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/82 (26%), Positives = 30/82 (36%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G++  P  +G   D  +      PG +G    PG  G +  PG  GL      +      
Sbjct: 1420 GLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGST 1479

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  G   D G+ G    PG  G
Sbjct: 1480 GPAGQKGDSGLPGPPGSPGPPG 1501



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 13/122 (10%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P  R      G  GL   PG +G     G +G   +   +      GV+G V  P
Sbjct: 1015 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP 1074

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV---TAAPET 156
            G  G    PG  G    +   G          Q GS+ + G      P G+     AP  
Sbjct: 1075 GPAGPAGSPGEDGDKGEIGEPG----------QKGSKGDKGENGPPGPPGLQGPVGAPGI 1124

Query: 157  AG 158
            AG
Sbjct: 1125 AG 1126



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG---VRGLVADPVVRR 85
            ++G V  P + G   +P  R      G+ G   D G RG    PG   ++GL   P  + 
Sbjct: 1115 LQGPVGAPGIAGGDGEPGPR---GQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKG 1171

Query: 86   LVADPGVRGLVADPGVRGLVADPGVRG 112
               D G  G    PG RG     G  G
Sbjct: 1172 ENGDVGPMGPPGPPGPRGPQGPNGADG 1198



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G+    G RG   + G  G    P  +    D G +G   +PG  G   DPG  G
Sbjct: 1227 PGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKG---NPGPVGFPGDPGPPG 1282



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 35/123 (28%), Positives = 47/123 (38%), Gaps = 16/123 (13%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           +G V  P  +     PG  GL   PG RG   + G +G    P    +V   G  G    
Sbjct: 885 QGPVGFPGPKGPPGPPGKDGLPGHPGQRG---ETGFQGKTGPPGPGGVVGPQGPTGETGP 941

Query: 99  PGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIR---RPAGVTAAPE 155
            G RG    PG  G       +GL  AA     + G++ + G + I     PAG+   P 
Sbjct: 942 IGERGHPGPPGPPG------EQGLPGAA----GKEGAKGDPGPQGISGKDGPAGLRGFPG 991

Query: 156 TAG 158
             G
Sbjct: 992 ERG 994



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/84 (26%), Positives = 32/84 (38%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            +RG   +  + G    P ++      G  G V  PG RG     G  GL   P  +    
Sbjct: 986  LRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPG 1045

Query: 89   DPGVRGLVADPGVRGLVADPGVRG 112
              G +G   + G +G     GV+G
Sbjct: 1046 PAGEKGAPGEKGPQGPAGRDGVQG 1069



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG+ G     G +G    PG  G   +   R +   PG RG     G RG     G RG
Sbjct: 801 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG---SRGARG 856



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 22/118 (18%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL------------VADPGVR 102
            G  G    PG  G V   G  G      +R +    G +GL            +  PG+ 
Sbjct: 1342 GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP 1401

Query: 103  GLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHG 160
            GL  DPG +G      + GL+          G   E G +  R   G   +P   G G
Sbjct: 1402 GLKGDPGSKGEKGHPGLIGLI----------GPPGEQGEKGDRGLPGTQGSPGAKGDG 1449



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG RG     G  G   + G +G             PG  G V   G  G     G+RG+
Sbjct: 1320 PGKRGPPGAAGAEGRQGEKGAKGEAGAE------GPPGKTGPVGPQGPAGKPGPEGLRGI 1373

Query: 114  AAALMVRGLVAAA 126
               +  +GL  AA
Sbjct: 1374 PGPVGEQGLPGAA 1386


>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
            sapiens]
          Length = 1806

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 28/94 (29%), Positives = 39/94 (41%)

Query: 20   VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
            + G V    + G        G +  P +  L  DPG +G    PG+ GL+  PG +G   
Sbjct: 1412 IPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKG 1471

Query: 80   DPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            D  +      PG +G    PG  G +  PG  GL
Sbjct: 1472 DRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGL 1505



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 26/82 (31%), Positives = 36/82 (43%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G +  P + GL  DP  +     PG+ GL+  PG +G   D G+ G    P  +     P
Sbjct: 1432 GPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 1491

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  G +  PG  GL    G +G
Sbjct: 1492 GPAGPLGPPGPPGLPGPQGPKG 1513



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G     G +G +  PG +G +  P  R +    GVRGL    G +G    PG +G 
Sbjct: 732 PGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGD 791

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 RG V        Q G R E G    +  AG T  P  +G
Sbjct: 792 MGLKGDRGEVG-------QIGPRGEDGPEGPKGRAGPTGDPGPSG 829



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/71 (30%), Positives = 33/71 (46%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V + G+ G     G  G +  PG+ GL  DP  +     PG+ GL+  PG +G   D G+
Sbjct: 1416 VGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGL 1475

Query: 111  RGLAAALMVRG 121
             G   +   +G
Sbjct: 1476 PGTQGSPGAKG 1486



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/58 (34%), Positives = 29/58 (50%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G+ G V + G+ G     G  G +  P +  L  DPG +G    PG+ GL+  PG +G
Sbjct: 1411 GIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1468



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G + +P  +    D G  G    PG++G V  PG+ G   +P  R      G+ G   D
Sbjct: 1128 KGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPR---GQQGMFGQKGD 1184

Query: 99   PGVRGLVADPGVRGL 113
             G RG    PG  GL
Sbjct: 1185 EGARGFPGPPGPIGL 1199



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 36   PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
            P  R  V  PV   L    G  G   + G +G + +PG +G   D         PG++G 
Sbjct: 1100 PAGRDGVQGPV--GLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGP 1157

Query: 96   VADPGVRGLVADPGVRG 112
            V  PG+ G   +PG RG
Sbjct: 1158 VGAPGIAGGDGEPGPRG 1174



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 28/92 (30%), Positives = 37/92 (40%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RGM      +G      + GL  D   R      G  G   D G+RG   + G RGL  +
Sbjct: 588 RGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGE 647

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
              R L+   G  G    PG+ G+   PG +G
Sbjct: 648 AGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKG 679



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G      V+G V  P   G    P       + G +G + +PG +G   D G  G    
Sbjct: 1098 QGPAGRDGVQGPVGLPGPAGPAGSP------GEDGDKGEIGEPGQKGSKGDKGENGPPGP 1151

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            P ++  V  PG+ G   +PG RG     G +G
Sbjct: 1152 PGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1183



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 39/130 (30%), Positives = 48/130 (36%), Gaps = 13/130 (10%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG+   P   G    P  R      G RG+  +PG +G     G+ GL  D   R     
Sbjct: 564 RGVQGPP---GPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 620

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            G  G   D G+RG   + G RGL      RGL+          G R   GA      AG
Sbjct: 621 QGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL----------GPRGTPGAPGQPGMAG 670

Query: 150 VTAAPETAGH 159
           V   P   G+
Sbjct: 671 VDGPPGPKGN 680



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/82 (29%), Positives = 33/82 (40%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G+  DP  +G    P +  L+  PG +G   D G+ G    PG +G    P     +  P
Sbjct: 1441 GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP 1500

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  GL    G +G     G  G
Sbjct: 1501 GPPGLPGPQGPKGNKGSTGPAG 1522



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 2/106 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  G + + G  G    PG +GL           DPG +G+    G  GL   PG RGL 
Sbjct: 976  GETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLP 1035

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
             A    GL          G  GS  E G+     P G+   P   G
Sbjct: 1036 GAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1081



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG  GL   PG  G    PG  G    P     +  PG+ GL  DPG +G    PG+ GL
Sbjct: 1404 PGPEGLRGIPGPVGEQGLPGAAGQDGPPGP---MGPPGLPGLKGDPGSKGEKGHPGLIGL 1460

Query: 114  AAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                  +G      +   QG  G++ + G   I  PAG    P   G
Sbjct: 1461 IGPPGEQGEKGDRGLPGTQGSPGAKGDGG---IPGPAGPLGPPGPPG 1504



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 20/60 (33%), Positives = 28/60 (46%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           D G+RG   + G RGL  + G RGL+           PG+ G+   PG +G +   G  G
Sbjct: 629 DDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPG 688



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 13  GWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLV 69
           G   ++  RG+   +  RG++      G    P +  +   PG +G +    +PG  G  
Sbjct: 634 GEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 693

Query: 70  ADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            +PG +GL   P  +  +  PG +G    PG+ GL   PG  G
Sbjct: 694 GNPGPQGL---PGPQGPIGPPGEKGPQGKPGLAGL---PGADG 730



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA------DPGV 74
            +G +     +G   D    G    P ++  V  PG+ G   +PG RG         D G 
Sbjct: 1128 KGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGA 1187

Query: 75   RGLVADPV---VRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            RG    P    ++ L   PG +G   D G  G    PG RG
Sbjct: 1188 RGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRG 1228



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            RG    +   G+   P  +G       +    + G +G     GV+G V  PG  G    
Sbjct: 1062 RGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS 1121

Query: 81   PVV---RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GS 135
            P     +  + +PG +G   D G  G    PG++G   A  + G         +QG  G 
Sbjct: 1122 PGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQ 1181

Query: 136  RRESGARCIRRPAG 149
            + + GAR    P G
Sbjct: 1182 KGDEGARGFPGPPG 1195



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           DPG +G     G  G    PG RG       R +  +PG +G     G+ GL  D G RG
Sbjct: 557 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG 616

Query: 113 LAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                   G      M    G     G   E+G R +  P G   AP   G
Sbjct: 617 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPG 667



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLV--- 87
           G   D  +RG   +   R L  + G RGL+   G  G    PG+ G+   P  +  +   
Sbjct: 625 GPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 684

Query: 88  ADPGVRGLVADPGVRGL------VADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRES 139
            +PG  G   +PG +GL      +  PG +G      + GL  A       G  G   E 
Sbjct: 685 GEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK 744

Query: 140 GARCIRRPAGVTAAPETAG 158
           GA     P G    P   G
Sbjct: 745 GALGPPGPQGPIGYPGPRG 763



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 14/142 (9%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G    S  +G +  P  +G +  P  R +    GVRGL    G +G    PG +G +   
Sbjct: 736 GKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLK 795

Query: 82  VVRRLVADPGVRGLVADPGVRGL---VADPGVRGLAAALMVRGLVAAALMGCRQG----- 133
             R  V   G RG     G +G      DPG  G A      G+        RQG     
Sbjct: 796 GDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGST 855

Query: 134 ------GSRRESGARCIRRPAG 149
                 G+  E GAR +    G
Sbjct: 856 GFPGFPGANGEKGARGVAGKPG 877



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V  PG +G    PG  GL   PG RG            + G +G    PG  G+V   G 
Sbjct: 927  VGFPGPKGPPGPPGKDGLPGHPGQRG------------ETGFQGKTGPPGPGGVVGPQGP 974

Query: 111  RGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
             G    +  RG          QG  G+  + GA+    P G++     AG
Sbjct: 975  TGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1024



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 21/59 (35%), Positives = 25/59 (42%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG +GL    G  G   DPG +G+        L   PG RGL    G  GL    G +G
Sbjct: 993  PGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQG 1051



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 24/91 (26%), Positives = 35/91 (38%)

Query: 22   GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
            G+  +   +G    P + GL+  P  +    D G+ G    PG +G    PG  G +  P
Sbjct: 1441 GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP 1500

Query: 82   VVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                L    G +G     G  G   D G+ G
Sbjct: 1501 GPPGLPGPQGPKGNKGSTGPAGQKGDSGLPG 1531



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 51  VADPG--VRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADP 108
           V +PG  V G     G  G++  PG++G    P       DPG RG    PG+ G    P
Sbjct: 433 VVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPP------GDPGDRGPPGRPGLPGADGLP 486

Query: 109 GVRGLAAALMVR 120
           G  G    L  R
Sbjct: 487 GPPGTMLMLPFR 498



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G+   +   G   DP  +G+        L   PG RGL   PG +G    PG++G    
Sbjct: 996  QGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGL---PGAQGA---PGLKGGEGP 1049

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                  V  PG RG     G  GL   PG +G
Sbjct: 1050 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1081



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 22/106 (20%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL   PG  G     G +G   DP         G RG+   PG  G    PG RG 
Sbjct: 531 PGPMGLTGRPGPVGGPGSSGAKGESGDP------GPQGPRGVQGPPGPTG---KPGKRGR 581

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGH 159
             A   RG+               E GA+  R   G+   P   GH
Sbjct: 582 PGADGGRGMPG-------------EPGAKGDRGFDGLPGLPGDKGH 614



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 20/63 (31%), Positives = 25/63 (39%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L   PG  G     G +G   DPG +G             PG RG     G RG+  +PG
Sbjct: 536 LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPG 595

Query: 110 VRG 112
            +G
Sbjct: 596 AKG 598



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 13/104 (12%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G   DPG  G   + G  G+   P +       G +G    PG  G   + G RG+A
Sbjct: 817 GRAGPTGDPGPSGQAGEKGKLGV---PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVA 873

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                RG          Q G     G+R  R P G      T+G
Sbjct: 874 GKPGPRG----------QRGPTGPRGSRGARGPTGKPGPKGTSG 907



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 21/66 (31%), Positives = 27/66 (40%)

Query: 51   VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
            V  PG RG     G  GL   PG +G       +    + G +G     GV+G V  PG 
Sbjct: 1056 VGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGP 1115

Query: 111  RGLAAA 116
             G A +
Sbjct: 1116 AGPAGS 1121



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G V  P  RG         L   PG +G     G +G   + G +G      V+  V  P
Sbjct: 1054 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP 1113

Query: 91   GVRGLVADPGV---RGLVADPGVRG 112
            G  G    PG    +G + +PG +G
Sbjct: 1114 GPAGPAGSPGEDGDKGEIGEPGQKG 1138



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 2/106 (1%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G++GL   PG +G   D G  G    P  R      G  G    PG  G V   G +G  
Sbjct: 1198 GLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEP 1257

Query: 115  AALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                  G    A +G  +G  G + E+G      P G    P   G
Sbjct: 1258 GEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDG 1303



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/70 (31%), Positives = 29/70 (41%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG++G     G  G V  PG RG         L   PG +G     G +G   + G +G 
Sbjct: 1041 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1100

Query: 114  AAALMVRGLV 123
            A    V+G V
Sbjct: 1101 AGRDGVQGPV 1110



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 40/132 (30%), Positives = 49/132 (37%), Gaps = 17/132 (12%)

Query: 12   AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
            AG G     RG    +   G    P  +G   D   +    +PG  G   DPG  G    
Sbjct: 1269 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPK---GNPGPVGFPGDPGPPGEPGP 1325

Query: 72   PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCR 131
             G  G+  D   +    DPG  G    PG  G    PG  G       RG   AA    R
Sbjct: 1326 AGQDGVGGD---KGEDGDPGQPG---PPGPSGEAGPPGPPG------KRGPPGAAGAEGR 1373

Query: 132  QG--GSRRESGA 141
            QG  G++ E+GA
Sbjct: 1374 QGEKGAKGEAGA 1385



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/82 (26%), Positives = 30/82 (36%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G++  P  +G   D  +      PG +G    PG  G +  PG  GL      +      
Sbjct: 1459 GLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGST 1518

Query: 91   GVRGLVADPGVRGLVADPGVRG 112
            G  G   D G+ G    PG  G
Sbjct: 1519 GPAGQKGDSGLPGPPGSPGPPG 1540



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 13/122 (10%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P  R      G  GL   PG +G     G +G   +   +      GV+G V  P
Sbjct: 1054 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP 1113

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGV---TAAPET 156
            G  G    PG  G    +   G          Q GS+ + G      P G+     AP  
Sbjct: 1114 GPAGPAGSPGEDGDKGEIGEPG----------QKGSKGDKGENGPPGPPGLQGPVGAPGI 1163

Query: 157  AG 158
            AG
Sbjct: 1164 AG 1165



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG---VRGLVADPVVRR 85
            ++G V  P + G   +P  R      G+ G   D G RG    PG   ++GL   P  + 
Sbjct: 1154 LQGPVGAPGIAGGDGEPGPR---GQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKG 1210

Query: 86   LVADPGVRGLVADPGVRGLVADPGVRG 112
               D G  G    PG RG     G  G
Sbjct: 1211 ENGDVGPMGPPGPPGPRGPQGPNGADG 1237



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G+    G RG   + G  G    P  +    D G +G   +PG  G   DPG  G
Sbjct: 1266 PGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKG---NPGPVGFPGDPGPPG 1321



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 35/123 (28%), Positives = 47/123 (38%), Gaps = 16/123 (13%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G V  P  +     PG  GL   PG RG   + G +G    P    +V   G  G    
Sbjct: 924  QGPVGFPGPKGPPGPPGKDGLPGHPGQRG---ETGFQGKTGPPGPGGVVGPQGPTGETGP 980

Query: 99   PGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIR---RPAGVTAAPE 155
             G RG    PG  G       +GL  AA     + G++ + G + I     PAG+   P 
Sbjct: 981  IGERGHPGPPGPPG------EQGLPGAA----GKEGAKGDPGPQGISGKDGPAGLRGFPG 1030

Query: 156  TAG 158
              G
Sbjct: 1031 ERG 1033



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/84 (26%), Positives = 32/84 (38%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
            +RG   +  + G    P ++      G  G V  PG RG     G  GL   P  +    
Sbjct: 1025 LRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPG 1084

Query: 89   DPGVRGLVADPGVRGLVADPGVRG 112
              G +G   + G +G     GV+G
Sbjct: 1085 PAGEKGAPGEKGPQGPAGRDGVQG 1108



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG+ G     G +G    PG  G   +   R +   PG RG     G RG     G RG
Sbjct: 840 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG---SRGARG 895



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 22/118 (18%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL------------VADPGVR 102
            G  G    PG  G V   G  G      +R +    G +GL            +  PG+ 
Sbjct: 1381 GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP 1440

Query: 103  GLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHG 160
            GL  DPG +G      + GL+          G   E G +  R   G   +P   G G
Sbjct: 1441 GLKGDPGSKGEKGHPGLIGLI----------GPPGEQGEKGDRGLPGTQGSPGAKGDG 1488



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
            PG RG     G  G   + G +G             PG  G V   G  G     G+RG+
Sbjct: 1359 PGKRGPPGAAGAEGRQGEKGAKGEAGAE------GPPGKTGPVGPQGPAGKPGPEGLRGI 1412

Query: 114  AAALMVRGLVAAA 126
               +  +GL  AA
Sbjct: 1413 PGPVGEQGLPGAA 1425


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           +GL   P +R L    G  G    PG  G   + G +G       + L   PG  G    
Sbjct: 620 KGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGK 679

Query: 99  PGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           PG +G+  + G  GL      RG            G R   GA+ ++ P G+   P T G
Sbjct: 680 PGDQGVPGEAGAPGLVGPRGERGF----------PGERGSPGAQGLQGPRGLPGTPGTDG 729



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 8/143 (5%)

Query: 21   RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
            +G   +S   G   +P ++G    P  +    D G  G    PG +GL    G RG+V  
Sbjct: 929  KGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLA---GQRGIVGL 985

Query: 81   PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GS 135
            P  R     PG+ G   +PG +G     G RG    +   GL   A    R+G     G 
Sbjct: 986  PGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGP 1045

Query: 136  RRESGARCIRRPAGVTAAPETAG 158
                GA  ++   G T A    G
Sbjct: 1046 PGRDGAAGVKGDRGETGAVGAPG 1068



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 34/119 (28%), Positives = 43/119 (36%), Gaps = 10/119 (8%)

Query: 31   GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
            G    P   G V  P        PG  G     G +G   D G  G   +P ++     P
Sbjct: 894  GATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPP 953

Query: 91   GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
            G +G   D G  G    PG +GLA     RG+V          G R E G   +  P+G
Sbjct: 954  GEKGEPGDDGPSGAEGPPGPQGLAGQ---RGIVGLP-------GQRGERGFPGLPGPSG 1002



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 4/105 (3%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G   + G RG   D G +G    P  R    +PG  G    PG  G    PG+ G 
Sbjct: 122 PGPQGPAGEQGPRGDRGDKGEKGA---PGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGN 178

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            AA M  G    A  G + G  +   G    R P G   AP   G
Sbjct: 179 FAAQMAGGFDEKA-GGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 222



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G    PG  G   +PG  G+   P  +     PG+ G    PG RG    PG +G  
Sbjct: 393 GEPGTPGSPGPAGASGNPGTDGI---PGAKGSAGAPGIAGAPGFPGPRG---PPGPQGAT 446

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             L  +G      +     G + E G +    PAG   AP  AG
Sbjct: 447 GPLGPKGQTGEPGI----AGFKGEQGPKGEPGPAGPQGAPGPAG 486



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 4/105 (3%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G    PG+ G    PG RG    P  +      G +G   +PG+ G   + G +G 
Sbjct: 416 PGAKGSAGAPGIAGAPGFPGPRG---PPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGE 472

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 +G    A    ++ G+R E G      P G   AP   G
Sbjct: 473 PGPAGPQGAPGPAGEEGKR-GARGEPGGVGPIGPPGERGAPGNRG 516



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 40/129 (31%), Positives = 45/129 (34%), Gaps = 12/129 (9%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVAD---PGVRGLVADPGVRGLVADPVVRRLVADPGV 92
           P  RGL   P       D G +G V     PG  G    PG +G    P V       G 
Sbjct: 557 PGARGLTGRP------GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGA 610

Query: 93  RGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMG-CRQGGSRRESGARCIRRPAGVT 151
            G     G +GL   PG+RGL       G  AA   G     G R E GA       G+ 
Sbjct: 611 NGEPGKAGEKGLPGAPGLRGLPGKDGETG--AAGPPGPAGPAGERGEQGAPGPSGFQGLP 668

Query: 152 AAPETAGHG 160
             P   G G
Sbjct: 669 GPPGPPGEG 677



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 39/138 (28%), Positives = 44/138 (31%), Gaps = 13/138 (9%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG       +G    P V+G    P         G RGL  + G  G     G RG    
Sbjct: 290 RGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQ 349

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESG 140
           P         G  G V   G  G    PG +G A     RG   A        G R E G
Sbjct: 350 P------GPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQ-------GPRGEPG 396

Query: 141 ARCIRRPAGVTAAPETAG 158
                 PAG +  P T G
Sbjct: 397 TPGSPGPAGASGNPGTDG 414



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 24/68 (35%), Positives = 27/68 (39%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL    G RG     G +G    P V+     PG  G     G RGL  + G  G 
Sbjct: 278 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGP 337

Query: 114 AAALMVRG 121
           A A   RG
Sbjct: 338 AGAAGARG 345



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           RG   +P     +  PG RG    PG RG     G+ G    P  R      G +G   D
Sbjct: 491 RGARGEPGGVGPIGPPGERGA---PGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 99  PGVRGLVADPGVRGL 113
           PG  G    PG RGL
Sbjct: 548 PGRPGEPGLPGARGL 562



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G+     +RG+       G    P       + G +G     G +GL   PG  G    
Sbjct: 620 KGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGK 679

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
           P  + +  + G  GLV   G RG    PG RG   A  ++G
Sbjct: 680 PGDQGVPGEAGAPGLVGPRGERGF---PGERGSPGAQGLQG 717



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 40/133 (30%), Positives = 46/133 (34%), Gaps = 20/133 (15%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G +  P  RG    P  R      G+ G    PG RG     G +G   DP        P
Sbjct: 501 GPIGPPGERGA---PGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDP------GRP 551

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GSRRESGARCIR 145
           G  GL   PG RGL   PG  G    +   G   A     R G     G+R + G     
Sbjct: 552 GEPGL---PGARGLTGRPGDAGPQGKV---GPSGAPGEDGRPGPPGPQGARGQPGVMGFP 605

Query: 146 RPAGVTAAPETAG 158
            P G    P  AG
Sbjct: 606 GPKGANGEPGKAG 618



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 34/104 (32%), Positives = 37/104 (35%), Gaps = 9/104 (8%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVAD------PVVRRLVADPGVRGLVADPGVRGLVA 106
           DPG  G    PG RGL   PG  G          P        PG +G    PGV G   
Sbjct: 547 DPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPG 606

Query: 107 DPGVRGLAAALMVRGLVAA-ALMGCRQGGSRRESGARCIRRPAG 149
             G  G       +GL  A  L G    G   E+GA     PAG
Sbjct: 607 PKGANGEPGKAGEKGLPGAPGLRGL--PGKDGETGAAGPPGPAG 648



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 36/138 (26%), Positives = 48/138 (34%), Gaps = 8/138 (5%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           +RG+       G    P   G   +   +      G +GL   PG  G    PG +G+  
Sbjct: 628 LRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPG 687

Query: 80  DPVVRRLVADPGVRGLVAD---PGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--- 133
           +     LV   G RG   +   PG +GL    G+ G       +G    A     QG   
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 134 --GSRRESGARCIRRPAG 149
             G   E GA  I  P G
Sbjct: 748 LQGMPGERGAAGIAGPKG 765



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 8/129 (6%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLVADPGVRGLVADPVVRRL 86
            RG+V  P  RG    P +     +PG +G      D G  G V  PG+ G   +P     
Sbjct: 980  RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP---GR 1036

Query: 87   VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCI 144
               PG  G     G  G+  D G  G   A    G   +       G  G R E+GA+  
Sbjct: 1037 EGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGP 1096

Query: 145  RRPAGVTAA 153
              P+G   A
Sbjct: 1097 MGPSGPAGA 1105



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 33/111 (29%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G +  PG RG    PG RG      +      PG RG     G +G   DPG  G
Sbjct: 496 EPGGVGPIGPPGERGA---PGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPG 552

Query: 113 LAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                  RGL         QG     G+  E G      P G    P   G
Sbjct: 553 EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMG 603



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 39/133 (29%), Positives = 44/133 (33%), Gaps = 24/133 (18%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P +     +PG  G    PG  G     G  G+  D      V  PG  G    P
Sbjct: 1020 GPVGPPGLTGPAGEPGREG---SPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSP 1076

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTA----A 153
            G  G     G RG A A               QG  G    +GAR I+ P G       A
Sbjct: 1077 GPAGPTGKQGDRGEAGA---------------QGPMGPSGPAGARGIQGPQGPRGDKGEA 1121

Query: 154  PETAGHGLWRHGG 166
             E    GL  H G
Sbjct: 1122 GEPGERGLKGHRG 1134



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/59 (33%), Positives = 23/59 (38%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G    PG  G    PG +G    P    L    G RG     G +G    PGV+G
Sbjct: 251 PGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG 309



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG RG    PG +GL    G+ G       +      G  G    PG++G+  + G  G+
Sbjct: 704 PGERG---SPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGI 760

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
           A     RG V          G+  + G R +  P G
Sbjct: 761 AGPKGDRGDVGEK----GPEGAPGKDGGRGLTGPIG 792



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 31/116 (26%), Positives = 36/116 (31%), Gaps = 11/116 (9%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           +  PG  G   + G  G     G  G    P  R     PG  G    PG  G    PG 
Sbjct: 791 IGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG---QPGA 847

Query: 111 RGLAAALMVRGLVAAALMGCRQG--------GSRRESGARCIRRPAGVTAAPETAG 158
           +G       +G   A       G        G     GAR  + P G T  P  AG
Sbjct: 848 KGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 34/116 (29%), Positives = 40/116 (34%), Gaps = 2/116 (1%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
           G   +P V   +   G  G    PG  G    PG  G    P  +     PG  GL    
Sbjct: 228 GEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVK 287

Query: 100 GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAA 153
           G RG     G +G A A  V+G   +       G  G R   G R    PAG   A
Sbjct: 288 GHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)

Query: 12  AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
           AG   +   +G    S  +G+   P   G    P  + +  + G  GLV   G RG   +
Sbjct: 647 AGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGE 706

Query: 72  ---PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
              PG +GL     +       G +G     G  G    PG++G+
Sbjct: 707 RGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGM 751



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/58 (32%), Positives = 23/58 (39%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G++G     G +G   +PG RGL        L   PG  G   D G  G     G RG
Sbjct: 1107 GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRG 1164



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 34/133 (25%), Positives = 43/133 (32%), Gaps = 7/133 (5%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
           ++GM  +    G+      R  V + G  G     G RGL    G  G       +  V 
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 89  DPGVRGLV---ADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIR 145
            PG  G       PG RG    PG  G A      G   A      + G   + G     
Sbjct: 808 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAK----GEQGEAGQKGDAGAP 863

Query: 146 RPAGVTAAPETAG 158
            P G + AP   G
Sbjct: 864 GPQGPSGAPGPQG 876



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/74 (29%), Positives = 26/74 (35%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G   +P  R L    G  GL   PG  G   D G  G       R      G  G    
Sbjct: 1118 KGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGA 1177

Query: 99   PGVRGLVADPGVRG 112
             G+ G +  PG RG
Sbjct: 1178 NGIPGPIGPPGPRG 1191



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 29/104 (27%), Positives = 33/104 (31%), Gaps = 7/104 (6%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G +G   +PG RGL    G  GL   P       D G  G     G RG     G  G  
Sbjct: 1116 GDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKD 1175

Query: 115  AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             A  + G +          G R  SG      P G    P   G
Sbjct: 1176 GANGIPGPIGPP-------GPRGRSGETGPAGPPGNPGPPGPPG 1212



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGL---VADPVVRRLVADPGVRGLVADPGVRGLVAD-- 107
           +PG+ G   + G +G     G +G      +   R    +PG  G +  PG RG   +  
Sbjct: 457 EPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRG 516

Query: 108 -PGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
            PG  GLA      G    + +   +G  G     G   +    G+T  P  AG
Sbjct: 517 FPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAG 570



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G RG    PG  G    PG  G V  P        PG  G     G +G   D G  G A
Sbjct: 885 GARGAQGPPGATGF---PGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 941

Query: 115 AALMVRG 121
               ++G
Sbjct: 942 GEPGLQG 948



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/67 (31%), Positives = 25/67 (37%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  G     G++G     G +G   +P  R L    G  GL   PG  G   D G  G A
Sbjct: 1098 GPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPA 1157

Query: 115  AALMVRG 121
                 RG
Sbjct: 1158 GPSGPRG 1164



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 23/83 (27%), Positives = 28/83 (33%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
            +G   +P  RGL        L   PG  G   D G  G     G RG             
Sbjct: 1118 KGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGA 1177

Query: 90   PGVRGLVADPGVRGLVADPGVRG 112
             G+ G +  PG RG   + G  G
Sbjct: 1178 NGIPGPIGPPGPRGRSGETGPAG 1200


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           +GL   P +R L    G  G    PG  G   + G +G       + L   PG  G    
Sbjct: 551 KGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGK 610

Query: 99  PGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           PG +G+  + G  GL      RG            G R   GA+ ++ P G+   P T G
Sbjct: 611 PGDQGVPGEAGAPGLVGPRGERGF----------PGERGSPGAQGLQGPRGLPGTPGTDG 660



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 8/143 (5%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G   +S   G   +P ++G    P  +    D G  G    PG +GL    G RG+V  
Sbjct: 860 KGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLA---GQRGIVGL 916

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GS 135
           P  R     PG+ G   +PG +G     G RG    +   GL   A    R+G     G 
Sbjct: 917 PGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGP 976

Query: 136 RRESGARCIRRPAGVTAAPETAG 158
               GA  ++   G T A    G
Sbjct: 977 PGRDGAAGVKGDRGETGAVGAPG 999



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 34/119 (28%), Positives = 43/119 (36%), Gaps = 10/119 (8%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P   G V  P        PG  G     G +G   D G  G   +P ++     P
Sbjct: 825 GATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPP 884

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
           G +G   D G  G    PG +GLA     RG+V          G R E G   +  P+G
Sbjct: 885 GEKGEPGDDGPSGAEGPPGPQGLAGQ---RGIVGLP-------GQRGERGFPGLPGPSG 933



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 4/105 (3%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G   + G RG   D G +G    P  R    +PG  G    PG  G    PG+ G 
Sbjct: 53  PGPQGPAGEQGPRGDRGDKGEKGA---PGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGN 109

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
            AA M  G    A  G + G  +   G    R P G   AP   G
Sbjct: 110 FAAQMAGGFDEKA-GGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 153



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  G    PG  G   +PG  G+   P  +     PG+ G    PG RG    PG +G  
Sbjct: 324 GEPGTPGSPGPAGASGNPGTDGI---PGAKGSAGAPGIAGAPGFPGPRG---PPGPQGAT 377

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             L  +G      +     G + E G +    PAG   AP  AG
Sbjct: 378 GPLGPKGQTGEPGI----AGFKGEQGPKGEPGPAGPQGAPGPAG 417



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 4/105 (3%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G    PG+ G    PG RG    P  +      G +G   +PG+ G   + G +G 
Sbjct: 347 PGAKGSAGAPGIAGAPGFPGPRG---PPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGE 403

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
                 +G    A    ++ G+R E G      P G   AP   G
Sbjct: 404 PGPAGPQGAPGPAGEEGKR-GARGEPGGVGPIGPPGERGAPGNRG 447



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 40/129 (31%), Positives = 45/129 (34%), Gaps = 12/129 (9%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVAD---PGVRGLVADPGVRGLVADPVVRRLVADPGV 92
           P  RGL   P       D G +G V     PG  G    PG +G    P V       G 
Sbjct: 488 PGARGLTGRP------GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGA 541

Query: 93  RGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMG-CRQGGSRRESGARCIRRPAGVT 151
            G     G +GL   PG+RGL       G  AA   G     G R E GA       G+ 
Sbjct: 542 NGEPGKAGEKGLPGAPGLRGLPGKDGETG--AAGPPGPAGPAGERGEQGAPGPSGFQGLP 599

Query: 152 AAPETAGHG 160
             P   G G
Sbjct: 600 GPPGPPGEG 608



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 39/138 (28%), Positives = 44/138 (31%), Gaps = 13/138 (9%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG       +G    P V+G    P         G RGL  + G  G     G RG    
Sbjct: 221 RGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQ 280

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESG 140
           P         G  G V   G  G    PG +G A     RG   A        G R E G
Sbjct: 281 P------GPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQ-------GPRGEPG 327

Query: 141 ARCIRRPAGVTAAPETAG 158
                 PAG +  P T G
Sbjct: 328 TPGSPGPAGASGNPGTDG 345



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 24/68 (35%), Positives = 27/68 (39%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL    G RG     G +G    P V+     PG  G     G RGL  + G  G 
Sbjct: 209 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGP 268

Query: 114 AAALMVRG 121
           A A   RG
Sbjct: 269 AGAAGARG 276



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 39  RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
           RG   +P     +  PG RG    PG RG     G+ G    P  R      G +G   D
Sbjct: 422 RGARGEPGGVGPIGPPGERGA---PGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 99  PGVRGLVADPGVRGL 113
           PG  G    PG RGL
Sbjct: 479 PGRPGEPGLPGARGL 493



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G+     +RG+       G    P       + G +G     G +GL   PG  G    
Sbjct: 551 KGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGK 610

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
           P  + +  + G  GLV   G RG    PG RG   A  ++G
Sbjct: 611 PGDQGVPGEAGAPGLVGPRGERGF---PGERGSPGAQGLQG 648



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 40/133 (30%), Positives = 46/133 (34%), Gaps = 20/133 (15%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G +  P  RG    P  R      G+ G    PG RG     G +G   DP        P
Sbjct: 432 GPIGPPGERGA---PGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDP------GRP 482

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG-----GSRRESGARCIR 145
           G  GL   PG RGL   PG  G    +   G   A     R G     G+R + G     
Sbjct: 483 GEPGL---PGARGLTGRPGDAGPQGKV---GPSGAPGEDGRPGPPGPQGARGQPGVMGFP 536

Query: 146 RPAGVTAAPETAG 158
            P G    P  AG
Sbjct: 537 GPKGANGEPGKAG 549



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 34/104 (32%), Positives = 37/104 (35%), Gaps = 9/104 (8%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVAD------PVVRRLVADPGVRGLVADPGVRGLVA 106
           DPG  G    PG RGL   PG  G          P        PG +G    PGV G   
Sbjct: 478 DPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPG 537

Query: 107 DPGVRGLAAALMVRGLVAA-ALMGCRQGGSRRESGARCIRRPAG 149
             G  G       +GL  A  L G    G   E+GA     PAG
Sbjct: 538 PKGANGEPGKAGEKGLPGAPGLRGL--PGKDGETGAAGPPGPAG 579



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 36/138 (26%), Positives = 48/138 (34%), Gaps = 8/138 (5%)

Query: 20  VRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVA 79
           +RG+       G    P   G   +   +      G +GL   PG  G    PG +G+  
Sbjct: 559 LRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPG 618

Query: 80  DPVVRRLVADPGVRGLVAD---PGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--- 133
           +     LV   G RG   +   PG +GL    G+ G       +G    A     QG   
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 134 --GSRRESGARCIRRPAG 149
             G   E GA  I  P G
Sbjct: 679 LQGMPGERGAAGIAGPKG 696



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 8/129 (6%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVA---DPGVRGLVADPGVRGLVADPVVRRL 86
            RG+V  P  RG    P +     +PG +G      D G  G V  PG+ G   +P     
Sbjct: 911  RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP---GR 967

Query: 87   VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCI 144
               PG  G     G  G+  D G  G   A    G   +       G  G R E+GA+  
Sbjct: 968  EGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGP 1027

Query: 145  RRPAGVTAA 153
              P+G   A
Sbjct: 1028 MGPSGPAGA 1036



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 33/111 (29%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G +  PG RG    PG RG      +      PG RG     G +G   DPG  G
Sbjct: 427 EPGGVGPIGPPGERGA---PGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPG 483

Query: 113 LAAALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
                  RGL         QG     G+  E G      P G    P   G
Sbjct: 484 EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMG 534



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 39/133 (29%), Positives = 44/133 (33%), Gaps = 24/133 (18%)

Query: 40   GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
            G V  P +     +PG  G    PG  G     G  G+  D      V  PG  G    P
Sbjct: 951  GPVGPPGLTGPAGEPGREG---SPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSP 1007

Query: 100  GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTA----A 153
            G  G     G RG A A               QG  G    +GAR I+ P G       A
Sbjct: 1008 GPAGPTGKQGDRGEAGA---------------QGPMGPSGPAGARGIQGPQGPRGDKGEA 1052

Query: 154  PETAGHGLWRHGG 166
             E    GL  H G
Sbjct: 1053 GEPGERGLKGHRG 1065



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/59 (33%), Positives = 23/59 (38%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G    PG  G    PG +G    P    L    G RG     G +G    PGV+G
Sbjct: 182 PGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG 240



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG RG    PG +GL    G+ G       +      G  G    PG++G+  + G  G+
Sbjct: 635 PGERG---SPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGI 691

Query: 114 AAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
           A     RG V          G+  + G R +  P G
Sbjct: 692 AGPKGDRGDVGEK----GPEGAPGKDGGRGLTGPIG 723



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 31/116 (26%), Positives = 36/116 (31%), Gaps = 11/116 (9%)

Query: 51  VADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           +  PG  G   + G  G     G  G    P  R     PG  G    PG  G    PG 
Sbjct: 722 IGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG---QPGA 778

Query: 111 RGLAAALMVRGLVAAALMGCRQG--------GSRRESGARCIRRPAGVTAAPETAG 158
           +G       +G   A       G        G     GAR  + P G T  P  AG
Sbjct: 779 KGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 34/116 (29%), Positives = 40/116 (34%), Gaps = 2/116 (1%)

Query: 40  GLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADP 99
           G   +P V   +   G  G    PG  G    PG  G    P  +     PG  GL    
Sbjct: 159 GEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVK 218

Query: 100 GVRGLVADPGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAA 153
           G RG     G +G A A  V+G   +       G  G R   G R    PAG   A
Sbjct: 219 GHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 274



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)

Query: 12  AGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD 71
           AG   +   +G    S  +G+   P   G    P  + +  + G  GLV   G RG   +
Sbjct: 578 AGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGE 637

Query: 72  ---PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
              PG +GL     +       G +G     G  G    PG++G+
Sbjct: 638 RGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGM 682



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/58 (32%), Positives = 23/58 (39%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            G++G     G +G   +PG RGL        L   PG  G   D G  G     G RG
Sbjct: 1038 GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRG 1095



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 34/133 (25%), Positives = 43/133 (32%), Gaps = 7/133 (5%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
           ++GM  +    G+      R  V + G  G     G RGL    G  G       +  V 
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 89  DPGVRGLV---ADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIR 145
            PG  G       PG RG    PG  G A      G   A      + G   + G     
Sbjct: 739 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAK----GEQGEAGQKGDAGAP 794

Query: 146 RPAGVTAAPETAG 158
            P G + AP   G
Sbjct: 795 GPQGPSGAPGPQG 807



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/74 (29%), Positives = 26/74 (35%)

Query: 39   RGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVAD 98
            +G   +P  R L    G  GL   PG  G   D G  G       R      G  G    
Sbjct: 1049 KGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGA 1108

Query: 99   PGVRGLVADPGVRG 112
             G+ G +  PG RG
Sbjct: 1109 NGIPGPIGPPGPRG 1122



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 29/104 (27%), Positives = 33/104 (31%), Gaps = 7/104 (6%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G +G   +PG RGL    G  GL   P       D G  G     G RG     G  G  
Sbjct: 1047 GDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKD 1106

Query: 115  AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
             A  + G +          G R  SG      P G    P   G
Sbjct: 1107 GANGIPGPIGPP-------GPRGRSGETGPAGPPGNPGPPGPPG 1143



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGL---VADPVVRRLVADPGVRGLVADPGVRGLVAD-- 107
           +PG+ G   + G +G     G +G      +   R    +PG  G +  PG RG   +  
Sbjct: 388 EPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRG 447

Query: 108 -PGVRGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
            PG  GLA      G    + +   +G  G     G   +    G+T  P  AG
Sbjct: 448 FPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAG 501



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G RG    PG  G    PG  G V  P        PG  G     G +G   D G  G A
Sbjct: 816 GARGAQGPPGATGF---PGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 872

Query: 115 AALMVRG 121
               ++G
Sbjct: 873 GEPGLQG 879



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 21/67 (31%), Positives = 25/67 (37%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
            G  G     G++G     G +G   +P  R L    G  GL   PG  G   D G  G A
Sbjct: 1029 GPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPA 1088

Query: 115  AALMVRG 121
                 RG
Sbjct: 1089 GPSGPRG 1095



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 23/83 (27%), Positives = 28/83 (33%)

Query: 30   RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
            +G   +P  RGL        L   PG  G   D G  G     G RG             
Sbjct: 1049 KGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGA 1108

Query: 90   PGVRGLVADPGVRGLVADPGVRG 112
             G+ G +  PG RG   + G  G
Sbjct: 1109 NGIPGPIGPPGPRGRSGETGPAG 1131


>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
          Length = 1073

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G RG   +PG +G+    GV G   +P  +    DPG++G    PG +G   DPG+ G
Sbjct: 810 GPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPG 867



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 28/92 (30%), Positives = 39/92 (42%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           RG   +P  +G+     V     +PG +G   DPG++G    PG +G   DP +      
Sbjct: 812 RGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGH 871

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
            G+ G    PG  G V  PG  G      +RG
Sbjct: 872 TGLMGPQGLPGENGPVGPPGPPGQPGFPGLRG 903



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 28/92 (30%), Positives = 38/92 (41%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           RG       +G+     V G   +P  +    DPG++G    PG +G   DPG+ G    
Sbjct: 812 RGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGH 871

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
             +      PG  G V  PG  G    PG+RG
Sbjct: 872 TGLMGPQGLPGENGPVGPPGPPGQPGFPGLRG 903



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 45  PVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGL 104
           P +++L  +PG RG    PG  GL  + G +GL   P  +     PG  G    PGVRG 
Sbjct: 243 PGLKQLNGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGF---PGVRGE 299

Query: 105 VADPGVRG 112
             D G +G
Sbjct: 300 KGDQGEKG 307



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L   PG+RG + + G+ G   + G  GL   P        PGVRG   D G +G +  PG
Sbjct: 260 LPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAP------GFPGVRGEKGDQGEKGELGLPG 313

Query: 110 VRG 112
           ++G
Sbjct: 314 LKG 316



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 37/107 (34%), Positives = 48/107 (44%), Gaps = 18/107 (16%)

Query: 54  PGVRGLVADPGVRG---LVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV 110
           PG++ L  +PG RG   L   PG+RG + +   + L   PG +G    PG  G    PGV
Sbjct: 243 PGLKQLNGEPGERGEDGLPGKPGLRGEIGE---QGLAGRPGEKGEAGLPGAPGF---PGV 296

Query: 111 RGLAAALMVRG-LVAAALMGCRQGGSRRESGARCIRRPAGVTAAPET 156
           RG       +G L    L G R  G + E+G      PAG    P T
Sbjct: 297 RGEKGDQGEKGELGLPGLKGDR--GEKGEAG------PAGPPGLPGT 335



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG +G   + G  GL    G RG   +P  + +    GV G   +PG +G   DPG++G
Sbjct: 791 PGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKG 849



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P  +G   +P +R     PG  G   D G  G+   PG RG   DP +  +   PG  G 
Sbjct: 462 PPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRG---DPGI-GVAGPPGPSGP 517

Query: 96  VAD---PGVRGLVADPGVRGLA 114
             D   PG RGL   PG +G A
Sbjct: 518 PGDKGSPGSRGLPGFPGPQGPA 539



 Score = 36.6 bits (83), Expect = 0.026
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG+ G +   G RG   +PG +G+     V     +PG +G   DPG++G    PG +G
Sbjct: 803 PGLPGFL---GPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKG 858



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           DPG+ G   +PG++G   + G +G    P  +      G  G   +PG  G V  PG  G
Sbjct: 357 DPGLPG---EPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSG 413

Query: 113 LAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
              ++   GL         +G  G+  E G+     P G   AP   G
Sbjct: 414 PPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPG 461



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 37/135 (27%), Positives = 49/135 (36%), Gaps = 4/135 (2%)

Query: 24  VANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVV 83
           V N    G    P + G   D  V       G  G   + G  GL   PG+ G       
Sbjct: 560 VCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGE 619

Query: 84  RRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARC 143
           R    + G +G    PGV G +  PG  G   A  + G  AA   G +  GS  + G   
Sbjct: 620 RGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAG--AAGPPGIQ--GSPGKEGPPG 675

Query: 144 IRRPAGVTAAPETAG 158
            + P+G+   P   G
Sbjct: 676 PQGPSGLPGIPGEEG 690



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G V  P +RG       R    + G  G    PG  G   DPG  GL   P   +   +P
Sbjct: 416 GSVGAPGLRGTPGKDGER---GEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGK-DGEP 471

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAALMVRG 121
           G+RG    PG  G   D G  G+  +   RG
Sbjct: 472 GLRGSPGLPGPLGTKGDRGAPGIPGSPGSRG 502



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G   DP   GL  +P ++    + G +G    PG +G     G  G   +P     V  
Sbjct: 352 KGEKGDP---GLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGA 408

Query: 90  PGVR---GLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRR 146
           PG     G V  PG+RG     G RG   A    G            G R + GA  +  
Sbjct: 409 PGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPV-------GPRGDPGAPGLPG 461

Query: 147 PAG 149
           P G
Sbjct: 462 PPG 464



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G   +P +RG    P       D G  G+   PG RG   DPG+ G+   P       D
Sbjct: 465 KGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRG---DPGI-GVAGPPGPSGPPGD 520

Query: 90  ---PGVRGLVADPGVRGLVADPGVRGL 113
              PG RGL   PG +G     G+  L
Sbjct: 521 KGSPGSRGLPGFPGPQGPAGRDGLSSL 547



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 11/110 (10%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG +G   + G  GL  +PG++G   +   +     PG +G     G  G   +PG  G 
Sbjct: 346 PGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGH 405

Query: 114 AAALMVRG----LVAAALMGC-RQGGSRRESGARCIRRPAGVTAAPETAG 158
             A    G    + A  L G   + G R E GA      AG   +P   G
Sbjct: 406 VGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGA------AGEEGSPGPVG 449



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 40/137 (29%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G   N    G V  P   G         L   PG  G   + G  G    PG  G   DP
Sbjct: 395 GAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDP 454

Query: 82  VVRRLVADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGA 141
               L   PG +G   +PG+RG    PG+ G       RG  A  + G    GSR + G 
Sbjct: 455 GAPGLPGPPG-KGKDGEPGLRG---SPGLPGPLGTKGDRG--APGIPG--SPGSRGDPGI 506

Query: 142 RCIRRPAGVTAAPETAG 158
             +  P G +  P   G
Sbjct: 507 G-VAGPPGPSGPPGDKG 522



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 9/65 (13%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD------PGVRGLVADPGVRGLVAD 107
           PG RGL   PG +G     G+  L++   +  L  D      PG  GL   PG+ G   D
Sbjct: 524 PGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPPGL---PGLPGFKGD 580

Query: 108 PGVRG 112
            GV G
Sbjct: 581 KGVPG 585



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G     G +G    PG+ G +     R    +PG +G+    GV G   +PG +G
Sbjct: 784 EPGPSGTPGQKGSKGENGSPGLPGFLGP---RGPPGEPGEKGVPGKEGVPGKPGEPGFKG 840



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 15/147 (10%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G+     +RG + +   +GL   P  +     PG  G    PGVRG   D G +G +  P
Sbjct: 259 GLPGKPGLRGEIGE---QGLAGRPGEKGEAGLPGAPGF---PGVRGEKGDQGEKGELGLP 312

Query: 82  VVRRLVADPGVRGLVADPGVRGLVA-------DPGVRGLAAALMVRGLVAAALMGCRQG- 133
            ++    + G  G    PG+ G  +        PG +G        GL     +  R G 
Sbjct: 313 GLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGE 372

Query: 134 -GSRRESGARCIRRPAGVTAAPETAGH 159
            G +  +G    +   G   AP  AG+
Sbjct: 373 LGPQGPTGPPGAKGQEGAHGAPGAAGN 399



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 6/113 (5%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G +G    PG  G    PG  G    P  +    + G  GL    G RG   +PG +G+ 
Sbjct: 765 GPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVP 824

Query: 115 AALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAGHGLWRHGGH 167
               V G       G +  G R + G +  + P G    P     G+  H GH
Sbjct: 825 GKEGVPGKPGEP--GFK--GERGDPGIKGDKGPPGGKGQP--GDPGIPGHKGH 871



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 54   PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
            PG  G + +PG  G     G  G +     R    DPG  G+    G+RG +  PG+ G
Sbjct: 958  PGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGV----GLRGEMGPPGIPG 1012



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 13/55 (23%)

Query: 55   GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
            G  G +   G RG   DPG  G+             G+RG +  PG+ G   +PG
Sbjct: 977  GPSGPIGPKGERGAKGDPGAPGV-------------GLRGEMGPPGIPGQPGEPG 1018



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 40/159 (25%), Positives = 57/159 (35%), Gaps = 15/159 (9%)

Query: 11  GAGWGSDLVVRGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVA 70
           G G   +  +RG        G   D    G+   P  R    DPG+ G+   PG  G   
Sbjct: 464 GKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSR---GDPGI-GVAGPPGPSGPPG 519

Query: 71  D---PGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD------PGVRGLAAALMVRG 121
           D   PG RGL   P  +      G+  L++   +  L  D      PG  GL      +G
Sbjct: 520 DKGSPGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKG 579

Query: 122 LVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
                    R+G  G + E+G   +  P G+     + G
Sbjct: 580 DKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQG 618



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 5/110 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGV---RGLVADPGVRGLVADPGV 110
           PG +G    PG+ G     G  G    P       +PG+    G    PG +G   D G 
Sbjct: 674 PGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGA 733

Query: 111 RGLAAALMVRGLVAAALMGCRQG--GSRRESGARCIRRPAGVTAAPETAG 158
            G        GL     +  + G  G     G +  R P G   +P + G
Sbjct: 734 PGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPG 783



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 18/60 (30%), Positives = 22/60 (36%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +PG  G    PG  G    PG +G   D        + G  GL    G+ G   D G  G
Sbjct: 703 EPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTG 762



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 21/68 (30%), Positives = 24/68 (35%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  GL    G  G     G +G    P        PG  G    PG +G   + G  GL
Sbjct: 746 PGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGL 805

Query: 114 AAALMVRG 121
              L  RG
Sbjct: 806 PGFLGPRG 813


>gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens]
          Length = 957

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 44/201 (21%), Positives = 70/201 (34%), Gaps = 45/201 (22%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G +  P  +G    P +  L+   G  G    PG +G   +PG++G+            
Sbjct: 619 KGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGM------------ 666

Query: 90  PGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAG 149
           PG  GL  +PG  G   +PG  GL      +G            G++ E G +  +   G
Sbjct: 667 PGASGLKGEPGATGSPGEPGYMGLPGIQGKKG----------DKGNQGEKGIQGQKGENG 716

Query: 150 VTAAPETAGHGLWRHGGHEMVSASDRCWMDIQPKHGSQNERIRQVLDSLGKISSCSSQAA 209
               P   G                     IQ  HG++ ER  +     G   +  S+  
Sbjct: 717 RQGIPGQQG---------------------IQGHHGAKGERGEK--GEPGVRGAIGSKGE 753

Query: 210 GRLDAVLRATITERSPSPPGP 230
             +D ++     +  P  PGP
Sbjct: 754 SGVDGLMGPAGPKGQPGDPGP 774



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 39/130 (30%), Positives = 50/130 (38%), Gaps = 5/130 (3%)

Query: 36  PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGL 95
           P ++G   DP +      PG  G    PG +G+   PGV G       R L    G  G 
Sbjct: 451 PGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGR 510

Query: 96  VADPGVRGLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPE 155
             D G RGL   PG+ G+  +    G    A       G   + GA+  +  AG    P 
Sbjct: 511 DGDKGDRGLPGFPGLHGMPGSKGEMG----AKGDKGSPGFYGKKGAKGEKGNAGFPGLPG 566

Query: 156 TAGHGLWRHG 165
            AG    RHG
Sbjct: 567 PAGEP-GRHG 575



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLA 114
           G  GL+  PG +G    PG  G         +   PG RGL+   G +G +  PG +G  
Sbjct: 575 GKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLM---GQKGEIGPPGQQGKK 631

Query: 115 AALMVRGLVAAALMGCRQG-----GSRRESGARCIRRPAGVTAAPETAG 158
            A  + GL+ +     + G     GS+ E G + +   +G+   P   G
Sbjct: 632 GAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATG 680



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 24/82 (29%), Positives = 29/82 (35%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G    P  +G+   P V       G RGL    G  G   D G RGL   P +  +    
Sbjct: 473 GQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSK 532

Query: 91  GVRGLVADPGVRGLVADPGVRG 112
           G  G   D G  G     G +G
Sbjct: 533 GEMGAKGDKGSPGFYGKKGAKG 554



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G +   G RGL   PG  G+            PG+ G+   PGVRGL   PG  G
Sbjct: 830 PGPPGPIGPEGPRGLPGLPGRDGV------------PGLVGVPGRPGVRGLKGLPGRNG 876



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 24/84 (28%), Positives = 30/84 (35%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVAD 89
           +G+   P V G       R L    G  G   D G RGL   PG+ G+           D
Sbjct: 481 QGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGD 540

Query: 90  PGVRGLVADPGVRGLVADPGVRGL 113
            G  G     G +G   + G  GL
Sbjct: 541 KGSPGFYGKKGAKGEKGNAGFPGL 564



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 6/98 (6%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVAD---PGVRGLVADPGVRGL 77
           RG+       G   D   RGL   P +  +    G  G   D   PG  G     G +G 
Sbjct: 499 RGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGN 558

Query: 78  VADPVVRRLVADPGVR---GLVADPGVRGLVADPGVRG 112
              P +     +PG     GL+  PG +G    PG  G
Sbjct: 559 AGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPG 596



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 12/51 (23%)

Query: 63  PGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G +   G RGL            PG+ G    PG+ G+   PGVRGL
Sbjct: 830 PGPPGPIGPEGPRGL------------PGLPGRDGVPGLVGVPGRPGVRGL 868



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 16/99 (16%)

Query: 48  RRLVADPGVRGLVADPGVRGLVAD---PGVRGLVADPVVRRLVADPGVRGLVADPGVR-- 102
           R L   PG+ G+    G  G   D   PG  G       +     PG+ G   +PG    
Sbjct: 517 RGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGK 576

Query: 103 -GLVADPGVRGLAAALMVRGLVAAALMGCRQGGSRRESG 140
            GL+  PG +G A +    G          Q G+R E G
Sbjct: 577 DGLMGSPGFKGEAGSPGAPG----------QDGTRGEPG 605



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 29/100 (29%), Positives = 37/100 (37%), Gaps = 19/100 (19%)

Query: 38  VRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD-----------PGVRGLVADPVVRRL 86
           V GLV  P        PGVRGL   PG  G               PG  G    P + + 
Sbjct: 853 VPGLVGVP------GRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISKE 906

Query: 87  --VADPGVRGLVADPGVRGLVADPGVRGLAAALMVRGLVA 124
               DPG+ G   D G  G+   PG  G+    +   ++A
Sbjct: 907 GPPGDPGLPGKDGDHGKPGIQGQPGPPGICDPSLCFSVIA 946


>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
          Length = 1142

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G+  +P  RG V D      +  PG  G    PG+ G    PG +G++  P  R    + 
Sbjct: 899 GVPGEPGERGPVGD------IGFPGPEGPSGKPGINGKDGIPGAQGIMGKPGDRGPKGER 952

Query: 91  GVRGLVADPGVRGLVADPGVRGLAAAL 117
           G +G+  D G +G    PG+ G+  A+
Sbjct: 953 GDQGIPGDRGSQGERGKPGLTGMKGAI 979



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 30/163 (18%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRL---------------VADPGVRGLVADPGVR 66
           G++ +  V+G   DP   GL+  P ++                 V  PG  G+    G++
Sbjct: 498 GVIGSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIK 557

Query: 67  GLVADPGVRGLV-----------ADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLAA 115
           G   DPG  G++           A P  + L  +PG+ G    PG RG   + G+ G+  
Sbjct: 558 GEKGDPG--GIIGPPGLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHG 615

Query: 116 ALMVRGLVAAALMGCRQGGSRRESGARCIRRPAGVTAAPETAG 158
           +    G     + G  + G++  +G   I+ P G+   P T G
Sbjct: 616 SPGDIGPQGIGIPG--RTGAQGPAGEPGIQGPRGLPGLPGTPG 656



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 30  RGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVAD---PGVRGLVADPVVRRL 86
           RG    P + G+   P        PG  G+  +PG RG V D   PG  G    P +   
Sbjct: 877 RGPAGPPGIAGMSGKP------GAPGPPGVPGEPGERGPVGDIGFPGPEGPSGKPGINGK 930

Query: 87  VADPGVRGLVADPGVRGLVADPGVRGL 113
              PG +G++  PG RG   + G +G+
Sbjct: 931 DGIPGAQGIMGKPGDRGPKGERGDQGI 957



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 17/106 (16%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL---- 77
           G V     +G   +P  +G   D     ++   GV+G   DPG  GL+  PG++G     
Sbjct: 471 GSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQQGSA 530

Query: 78  -----------VADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
                      V  P    +    G++G   DPG  G++  PG+ G
Sbjct: 531 GSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPG--GIIGPPGLPG 574



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG  G V   G +G   +P  +G   D     ++   GV+G   DPG  GL+  PG++G
Sbjct: 467 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKG 525



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 50  LVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPG 109
           L  D G  GL   PG  G V   G +G   +P  +    D G  G++   GV+G   DPG
Sbjct: 457 LKGDKGETGL---PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPG 513

Query: 110 VRGLAAALMVRGLVAAA 126
             GL  +  ++G   +A
Sbjct: 514 PPGLIGSPGLKGQQGSA 530



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 21  RGMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVAD 80
           +G       +G   D    G++    V+    DPG  GL+  PG++G     G  G    
Sbjct: 479 KGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGP 538

Query: 81  PVVRRLVADPGVRGLVADPGVRGLVADPG 109
           P     V  PG  G+    G++G   DPG
Sbjct: 539 P---GDVGLPGEHGIPGKQGIKGEKGDPG 564



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 9/107 (8%)

Query: 30   RGMVAD---PVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRL 86
            RG V D   P   G    P +      PG +G++  PG RG   + G +G+  D   +  
Sbjct: 907  RGPVGDIGFPGPEGPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGE 966

Query: 87   VADPGVRGL------VADPGVRGLVADPGVRGLAAALMVRGLVAAAL 127
               PG+ G+      +  PG +G +  PG +G   +  + G+ A A+
Sbjct: 967  RGKPGLTGMKGAIGPMGPPGNKGSMGSPGHQGPPGSPGIPGIPADAV 1013



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 31  GMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADP 90
           G V +P   GL   P +       G RG    PG+ G+   PG  G    P       +P
Sbjct: 854 GPVGEPGAMGL---PGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVP------GEP 904

Query: 91  GVRGLVAD---PGVRGLVADPGVRG 112
           G RG V D   PG  G    PG+ G
Sbjct: 905 GERGPVGDIGFPGPEGPSGKPGING 929



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           +P  +G   D G  G++   GV+G   DP    L+  PG++G     G  G    PG  G
Sbjct: 484 EPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVG 543

Query: 113 L 113
           L
Sbjct: 544 L 544



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 29   VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL------VADPV 82
            + G    P  +G++  P  R    + G +G+  D G +G    PG+ G+      +  P 
Sbjct: 927  INGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKPGLTGMKGAIGPMGPPG 986

Query: 83   VRRLVADPGVRGLVADPGVRGLVAD 107
             +  +  PG +G    PG+ G+ AD
Sbjct: 987  NKGSMGSPGHQGPPGSPGIPGIPAD 1011



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 18/59 (30%), Positives = 25/59 (42%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG+ G     G +G    PG+ G   D  ++ +   PG  G    PG+ G    PG  G
Sbjct: 737 PGIPGREGPKGSKGERGYPGIPGEKGDEGLQGIPGIPGAPGPTGPPGLMGRTGHPGPTG 795



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 19/101 (18%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           G+   +  +G   +P ++G       R L   PG  G   + GV G    PG+ G   DP
Sbjct: 626 GIPGRTGAQGPAGEPGIQG------PRGLPGLPGTPGTPGNDGVPGRDGKPGLPGPPGDP 679

Query: 82  VVRRLVADPG-------------VRGLVADPGVRGLVADPG 109
           +   L+ D G             V GL ++ G  G   +PG
Sbjct: 680 IALPLLGDIGALLKNFCGNCQASVPGLKSNKGEEGGAGEPG 720



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 18/59 (30%), Positives = 24/59 (40%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           PG+ G   D G++G+   PG  G    P +      PG  G   + G  G    PG  G
Sbjct: 755 PGIPGEKGDEGLQGIPGIPGAPGPTGPPGLMGRTGHPGPTGAKGEKGSDGPPGKPGPPG 813



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 12/94 (12%)

Query: 22  GMVANSVVRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADP 81
           GM +   ++G V  P   G    P  +    DPG  G     G+ GL   PGV+G     
Sbjct: 824 GMSSLYKIKGGVNVPSYPGPPGPPGPK---GDPGPVGEPGAMGLPGLEGFPGVKG----- 875

Query: 82  VVRRLVADPGVRGLVADPGV---RGLVADPGVRG 112
             R     PG+ G+   PG     G+  +PG RG
Sbjct: 876 -DRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERG 908



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/84 (26%), Positives = 34/84 (40%)

Query: 29  VRGMVADPVVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVA 88
           V G+ ++    G   +P     +A  G  G    PG+ G     G +G    P +     
Sbjct: 703 VPGLKSNKGEEGGAGEPGKYDSMARKGDIGPRGPPGIPGREGPKGSKGERGYPGIPGEKG 762

Query: 89  DPGVRGLVADPGVRGLVADPGVRG 112
           D G++G+   PG  G    PG+ G
Sbjct: 763 DEGLQGIPGIPGAPGPTGPPGLMG 786



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/58 (29%), Positives = 24/58 (41%)

Query: 55  GVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRG 112
           G +G    PG+ G   D G++G+   P        PG+ G    PG  G   + G  G
Sbjct: 747 GSKGERGYPGIPGEKGDEGLQGIPGIPGAPGPTGPPGLMGRTGHPGPTGAKGEKGSDG 804



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVV---RRLVADPGVRGLVADPGVRGLVADPGV 110
           PG +G   +PG  GL   PG  G   +      +    + G +G   DP + GL  + G+
Sbjct: 303 PGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGL 362

Query: 111 RG 112
           +G
Sbjct: 363 KG 364



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 15/61 (24%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGVRGL 113
           PG  G   DPG    V +PG  GL            PG+ G     G RG    PG+ G+
Sbjct: 844 PGPPGPKGDPGP---VGEPGAMGL------------PGLEGFPGVKGDRGPAGPPGIAGM 888

Query: 114 A 114
           +
Sbjct: 889 S 889



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)

Query: 54  PGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLV---ADPGVRGLVAD--- 107
           PG +G     G +G   + G +G   DP +  L  + G++G +     PG +G   D   
Sbjct: 324 PGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGP 383

Query: 108 PGVRGLAAALMVRG 121
           PG   L  +L ++G
Sbjct: 384 PGPPALPGSLGIQG 397



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGV---RGLVADPGVRGLVADPG 109
           + G+ G    PG +G   +PG  GL   P       + G    +G   + G +G   DP 
Sbjct: 293 EAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDPA 352

Query: 110 VRGL 113
           + GL
Sbjct: 353 LAGL 356



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 54  PGVRGLVADPGVRGL--VADPGVRGLVADPVV---RRLVADPGVRGLVADPGVRGLVADP 108
           PGV G   D G +G+      G +G   +P +   R L   PG  G   + GV G    P
Sbjct: 611 PGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPRGLPGLPGTPGTPGNDGVPGRDGKP 670

Query: 109 GVRG 112
           G+ G
Sbjct: 671 GLPG 674



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 53  DPGVRGLVADPGVRGLVADPGVRGLVADPVVRRLVADPGVRGLVADPGVRGLVADPGV-- 110
           D G++G+   PG  G    PG+ G    P         G +G    PG  G    PG+  
Sbjct: 763 DEGLQGIPGIPGAPGPTGPPGLMGRTGHP---GPTGAKGEKGSDGPPGKPGPPGPPGIPF 819

Query: 111 ---RGLAAALMVRG 121
               G+++   ++G
Sbjct: 820 NERNGMSSLYKIKG 833


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,034,625
Number of Sequences: 37866
Number of extensions: 575341
Number of successful extensions: 11672
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1952
Number of HSP's gapped (non-prelim): 3917
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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