LOC100128935 7806

Name: LOC100128935	Sequence: fasta or formatted (284aa)		NCBI GI: 169169647
Description: PREDICTED: hypothetical protein LOC100128935		Not currently referenced in the text
Other entries for this name: alt prot {284aa} PREDICTED: hypothetical protein LOC100128935
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 33 3 C cysteine 1.8 5 1 D aspartate 5.6 16 1 E glutamate 4.2 12 2 F phenylalanine 0.4 1 1 G glycine 11.6 33 2 H histidine 1.8 5 1 I isoleucine 2.8 8 1 K lysine 3.2 9 1 L leucine 7.7 22 1 M methionine 2.8 8 1 N asparagine 1.4 4 1 P proline 6.7 19 2 Q glutamine 3.2 9 1 R arginine 10.9 31 2 S serine 7.0 20 2 T threonine 2.8 8 1 V valine 12.7 36 2 W tryptophan 1.8 5 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100128935 LOC100128935 0.993 PREDICTED: hypothetical protein LOC100128935 COL7A1 0.055 alpha 1 type VII collagen precursor COL27A1 0.048 collagen, type XXVII, alpha 1 COL4A6 0.048 type IV alpha 6 collagen isoform A precursor COL4A6 0.048 type IV alpha 6 collagen isoform B precursor COL24A1 0.048 collagen, type XXIV, alpha 1 COL4A5 0.046 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.046 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.046 type IV collagen alpha 5 isoform 3 precursor COL4A1 0.043 alpha 1 type IV collagen preproprotein COL1A2 0.041 alpha 2 type I collagen LOC727962 0.041 PREDICTED: similar to collagen, type I, alpha 2 [Ho... COL8A2 0.039 collagen, type VIII, alpha 2 COL5A2 0.037 alpha 2 type V collagen preproprotein COL9A2 0.037 alpha 2 type IX collagen COL3A1 0.037 collagen type III alpha 1 preproprotein COL11A2 0.037 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.037 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.037 collagen, type XI, alpha 2 isoform 1 preproprotein ... LOC653203 0.035 PREDICTED: hypothetical protein COL17A1 0.035 alpha 1 type XVII collagen COL11A1 0.035 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.035 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.035 alpha 1 type XI collagen isoform A preproprotein [Ho... COL21A1 0.035 collagen, type XXI, alpha 1 precursor COL2A1 0.033 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.033 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100293055 0.033 PREDICTED: similar to COL22A1 protein COL19A1 0.033 alpha 1 type XIX collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.