LOC345645 19650

Name: LOC345645	Sequence: fasta or formatted (415aa)		NCBI GI: 239748566
Description: PREDICTED: similar to hCG2002932		Not currently referenced in the text
Other entries for this name: alt mRNA {415aa} PREDICTED: similar to hCG2002932 alt mRNA {415aa} PREDICTED: hypothetical protein LOC345645
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 21 2 C cysteine 1.0 4 1 D aspartate 6.3 26 2 E glutamate 11.1 46 2 F phenylalanine 2.4 10 1 G glycine 6.5 27 2 H histidine 2.9 12 1 I isoleucine 7.2 30 2 K lysine 8.4 35 2 L leucine 10.6 44 2 M methionine 3.6 15 2 N asparagine 2.2 9 1 P proline 4.6 19 2 Q glutamine 4.1 17 2 R arginine 4.1 17 1 S serine 4.6 19 1 T threonine 5.8 24 1 V valine 7.5 31 2 W tryptophan 0.0 0 0 Y tyrosine 2.2 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2002932 LOC345645 1.000 PREDICTED: similar to hCG2002932 LOC345645 1.000 PREDICTED: hypothetical protein LOC345645 PSMC1 0.813 proteasome 26S ATPase subunit 1 LOC652826 0.369 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.369 proteasome 26S ATPase subunit 4 isoform 1 PSMC4 0.359 proteasome 26S ATPase subunit 4 isoform 2 PSMC5 0.323 proteasome 26S ATPase subunit 5 PSMC3 0.322 proteasome 26S ATPase subunit 3 PSMC2 0.287 proteasome 26S ATPase subunit 2 PSMC6 0.273 proteasome 26S ATPase subunit 6 SPATA5 0.181 spermatogenesis associated 5 VCP 0.165 valosin-containing protein AFG3L2 0.159 AFG3 ATPase family gene 3-like 2 ATAD2B 0.152 ATPase family, AAA domain containing 2B SPATA5L1 0.150 spermatogenesis associated 5-like 1 ATAD2 0.143 ATPase family, AAA domain containing 2 PEX1 0.134 peroxin1 NVL 0.131 nuclear VCP-like isoform 2 NVL 0.131 nuclear VCP-like isoform 1 SPG7 0.126 spastic paraplegia 7 isoform 1 PEX6 0.112 peroxisomal biogenesis factor 6 YME1L1 0.111 YME1-like 1 isoform 1 YME1L1 0.111 YME1-like 1 isoform 3 LOC728806 0.110 PREDICTED: similar to N-ethylmaleimide-sensitive fa... KATNA1 0.110 katanin p60 subunit A 1 NSF 0.110 vesicle-fusing ATPase KATNAL1 0.105 katanin p60 subunit A-like 1 KATNAL1 0.105 katanin p60 subunit A-like 1 KATNAL2 0.101 katanin p60 subunit A-like 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.