SSPO 3295

Name: SSPO	Sequence: fasta or formatted (5147aa)		NCBI GI: 134031945
Description: SCO-spondin		Referenced in: Protein Composition and Structure Gene Structure Mucins Additional Genes in Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 376 3 C cysteine 10.9 563 2 D aspartate 3.9 201 2 E glutamate 5.3 271 3 F phenylalanine 1.5 79 1 G glycine 11.2 578 3 H histidine 3.0 154 2 I isoleucine 1.0 50 1 K lysine 0.7 38 1 L leucine 8.2 422 3 M methionine 0.9 44 2 N asparagine 1.7 90 2 P proline 10.8 557 3 Q glutamine 5.8 300 2 R arginine 6.0 309 3 S serine 8.3 429 2 T threonine 4.6 235 3 V valine 4.4 229 3 W tryptophan 3.1 160 2 Y tyrosine 1.2 62 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SCO-spondin VWF 0.052 von Willebrand factor preproprotein MUC5B 0.050 mucin 5, subtype B, tracheobronchial LOC100132635 0.050 PREDICTED: similar to mucin 5, partial MUC5AC 0.050 mucin 5AC MUC2 0.045 mucin 2 precursor OTOG 0.045 PREDICTED: otogelin isoform 1 OTOG 0.045 PREDICTED: otogelin isoform 2 OTOG 0.045 PREDICTED: otogelin isoform 2 OTOG 0.045 PREDICTED: otogelin isoform 1 OTOG 0.045 PREDICTED: otogelin isoform 2 OTOG 0.045 PREDICTED: otogelin isoform 1 MUC6 0.040 mucin 6, gastric C12orf64 0.038 PREDICTED: chromosome 12 open reading frame 64 [Hom... C12orf64 0.038 PREDICTED: chromosome 12 open reading frame 64 [Hom... C12orf64 0.038 PREDICTED: hypothetical protein LOC283310 LOC100294420 0.033 PREDICTED: similar to mucin 2 LOC100291118 0.033 PREDICTED: hypothetical protein XP_002347351 LOC100287737 0.033 PREDICTED: hypothetical protein XP_002343203 LOC100290309 0.033 PREDICTED: hypothetical protein XP_002348012 FCGBP 0.033 Fc fragment of IgG binding protein LOC100133944 0.029 PREDICTED: similar to Fc fragment of IgG binding pr... LOC100293676 0.024 PREDICTED: similar to Fc fragment of IgG binding pr... ZAN 0.023 zonadhesin isoform 3 ZAN 0.023 zonadhesin isoform 6 KCP 0.020 cysteine rich BMP regulator 2 isoform 1 TECTA 0.016 tectorin alpha precursor HMCN1 0.016 hemicentin 1 LRP4 0.016 low density lipoprotein receptor-related protein 4 ... LOC100293409 0.015 PREDICTED: similar to Mucin-19 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.