Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 126352700
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|126352700 elastin isoform b precursor [Homo sapiens]
(677 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|126352700 elastin isoform b precursor [Homo sapiens] 1356 0.0
gi|126352322 elastin isoform c precursor [Homo sapiens] 1342 0.0
gi|126352608 elastin isoform e precursor [Homo sapiens] 1337 0.0
gi|126352446 elastin isoform d precursor [Homo sapiens] 1330 0.0
gi|126352440 elastin isoform a precursor [Homo sapiens] 1325 0.0
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 181 2e-45
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 170 5e-42
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 169 6e-42
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 160 4e-39
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 160 4e-39
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 160 4e-39
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 160 4e-39
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 157 2e-38
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 157 2e-38
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 152 1e-36
gi|48762934 alpha 2 type I collagen [Homo sapiens] 152 1e-36
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 150 3e-36
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 149 1e-35
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 149 1e-35
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ... 147 2e-35
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s... 147 2e-35
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 144 3e-34
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 143 5e-34
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 139 7e-33
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 139 7e-33
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 139 7e-33
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 139 7e-33
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 139 7e-33
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 139 9e-33
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens] 138 1e-32
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 1356 bits (3510), Expect = 0.0
Identities = 677/677 (100%), Positives = 677/677 (100%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGL 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGL
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGL 60
Query: 61 AGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVP 120
AGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVP
Sbjct: 61 AGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVP 120
Query: 121 QPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIP 180
QPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIP
Sbjct: 121 QPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIP 180
Query: 181 GVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV 240
GVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV
Sbjct: 181 GVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV 240
Query: 241 GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAA 300
GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAA
Sbjct: 241 GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAA 300
Query: 301 AKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSP 360
AKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSP
Sbjct: 301 AKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSP 360
Query: 361 EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVG 420
EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVG
Sbjct: 361 EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVG 420
Query: 421 GVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV 480
GVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV
Sbjct: 421 GVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV 480
Query: 481 APGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVP 540
APGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVP
Sbjct: 481 APGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVP 540
Query: 541 GLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAA 600
GLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAA
Sbjct: 541 GLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAA 600
Query: 601 AKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSP 660
AKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSP
Sbjct: 601 AKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSP 660
Query: 661 IFPGGACLGKACGRKRK 677
IFPGGACLGKACGRKRK
Sbjct: 661 IFPGGACLGKACGRKRK 677
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 1342 bits (3473), Expect = 0.0
Identities = 677/692 (97%), Positives = 677/692 (97%), Gaps = 15/692 (2%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP----------ALGPGG 50
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP ALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 51 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 110
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 111 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 165
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
Query: 166 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 225
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
Query: 226 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 285
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
Query: 286 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 345
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
Query: 346 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 405
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
Query: 406 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 465
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG
Sbjct: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 480
Query: 466 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 525
VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG
Sbjct: 481 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
Query: 526 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 585
VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI
Sbjct: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 600
Query: 586 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 645
PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA
Sbjct: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
Query: 646 AKYGVAARPGFGLSPIFPGGACLGKACGRKRK 677
AKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 661 AKYGVAARPGFGLSPIFPGGACLGKACGRKRK 692
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 1337 bits (3460), Expect = 0.0
Identities = 677/705 (96%), Positives = 677/705 (96%), Gaps = 28/705 (3%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP----------ALGPGG 50
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP ALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 51 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 110
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 111 LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 170
LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP
Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 180
Query: 171 GVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 230
GVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG
Sbjct: 181 GVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 240
Query: 231 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT 290
KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT
Sbjct: 241 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT 300
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP 350
PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP
Sbjct: 301 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP 360
Query: 351 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 410
GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV
Sbjct: 361 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 420
Query: 411 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 470
PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP
Sbjct: 421 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 480
Query: 471 GVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGV 530
GVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGV
Sbjct: 481 GVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGV 540
Query: 531 PGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVV 590
PGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVV
Sbjct: 541 PGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVV 600
Query: 591 GAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKY-- 648
GAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKY
Sbjct: 601 GAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGA 660
Query: 649 ----------------GVAARPGFGLSPIFPGGACLGKACGRKRK 677
GVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 661 AGLGGVLGGAGQFPLGGVAARPGFGLSPIFPGGACLGKACGRKRK 705
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 1330 bits (3443), Expect = 0.0
Identities = 677/711 (95%), Positives = 677/711 (95%), Gaps = 34/711 (4%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP----------ALGPGG 50
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP ALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 51 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 110
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 111 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 165
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
Query: 166 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 225
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
Query: 226 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 285
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
Query: 286 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 345
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
Query: 346 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 405
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
Query: 406 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-------------------GLVP 446
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY GLVP
Sbjct: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
Query: 447 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 506
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
Query: 507 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 566
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
Query: 567 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 626
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
Query: 627 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 677
GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 661 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 711
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 1325 bits (3430), Expect = 0.0
Identities = 677/724 (93%), Positives = 677/724 (93%), Gaps = 47/724 (6%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP----------ALGPGG 50
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP ALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 51 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 110
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 111 LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 170
LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP
Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 180
Query: 171 GVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 230
GVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG
Sbjct: 181 GVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 240
Query: 231 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT 290
KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT
Sbjct: 241 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT 300
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP 350
PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP
Sbjct: 301 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP 360
Query: 351 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 410
GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV
Sbjct: 361 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 420
Query: 411 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-------------------GLVPGVGVA 451
PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY GLVPGVGVA
Sbjct: 421 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVA 480
Query: 452 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQL 511
PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQL
Sbjct: 481 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQL 540
Query: 512 RAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP 571
RAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP
Sbjct: 541 RAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP 600
Query: 572 GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGV 631
GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGV
Sbjct: 601 GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGV 660
Query: 632 GGLGGIPPAAAAKAAKY------------------GVAARPGFGLSPIFPGGACLGKACG 673
GGLGGIPPAAAAKAAKY GVAARPGFGLSPIFPGGACLGKACG
Sbjct: 661 GGLGGIPPAAAAKAAKYGAAGLGGVLGGAGQFPLGGVAARPGFGLSPIFPGGACLGKACG 720
Query: 674 RKRK 677
RKRK
Sbjct: 721 RKRK 724
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 181 bits (459), Expect = 2e-45
Identities = 238/715 (33%), Positives = 266/715 (37%), Gaps = 95/715 (13%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPAL-GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 79
P+ P G PG+ PG G PG + L G G+P P P G G G P T P
Sbjct: 282 PAGPKGEPGS-PGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPA 340
Query: 80 AL--VPGGV-ADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVP--QPGAGVKPGKVPGV 134
PG V A A + + G GV G G AGA P PGA +PG
Sbjct: 341 GPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGAN 400
Query: 135 GLPGVYPGGVLPGARFP----GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP 190
G PG+ PGAR P G G PG P G +P APG G GP G P
Sbjct: 401 GAPGIAGAPGFPGARGPSGPQGPGGPPG-PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGP 459
Query: 191 GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV----GPQAAA 246
P G K G G P TG LP GP G G G G+P GV GP
Sbjct: 460 PGPAGEEGKR----GARGEPGPTG-LP---GPPGERGGPGSRGFPGADGVAGPKGPAGER 511
Query: 247 AAAAKAAAKFGAGAAGV-----LPGVGG-AGVPGVPG--------------------AIP 280
+ A K G AG LPG G G PG PG P
Sbjct: 512 GSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPP 571
Query: 281 GIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPG-FGP-GVVGVPGA-GVPGVGV 336
G G AGV G P AA KA + G VPG PG GP G G GA G PG
Sbjct: 572 GARGQAGVMGFPGPKGAAGEPGKAGERG-----VPGPPGAVGPAGKDGEAGAQGPPGPAG 626
Query: 337 PGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 396
P AG PG G+ P A K + G +G G P+ G GFPG
Sbjct: 627 PAGERGEQGPAGSPG--FQGLPGPAGPPGEAGKPGEQGVPGDLGAPG-PSGARGERGFPG 683
Query: 397 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL--------VPGV 448
GV G PG AG G G PG G G +P A + A + G+ +PG
Sbjct: 684 ER-GVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQ-GMPGERGAAGLPGP 741
Query: 449 GVAPGVGVAPGVGVAPGV----GLAPGVGVAPGVGVAPG----VGVAPGIGPGGVAAAAK 500
G G +PG GL +G PG APG G + GP G A
Sbjct: 742 KGDRGDAGPKGADGSPGKDGVRGLTGPIG-PPGPAGAPGDKGESGPSGPAGPTGARGAPG 800
Query: 501 SAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA 559
+ A GA G PG G G AG PG AG PG GA
Sbjct: 801 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGA-P 859
Query: 560 AAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL- 618
AK A+ A PG G GA G VG PG AGP A G G AG
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRP 919
Query: 619 GGLG-------VGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 664
G +G G G PG G G P P A + GV PG FPG
Sbjct: 920 GEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG 974
Score = 169 bits (427), Expect = 1e-41
Identities = 224/649 (34%), Positives = 254/649 (39%), Gaps = 64/649 (9%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAG-----AGLGAGLGAFPAVTF 77
P P G PG G+PG P GP G P P P GL G G + ++
Sbjct: 122 PRGPAGPPGR--DGIPGQPGLP--GPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISV 177
Query: 78 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKPGKVPGVG 135
PG + P G A G G PG G ++G + P+ PG K G G
Sbjct: 178 PGPMGPSGPRGLPGP-PGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAG 236
Query: 136 LPGVYPGGVLP----GAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP 190
PG PG P GAR PG LPG+ G G+ GA GP G +P
Sbjct: 237 KPG-RPGERGPPGPQGARGLPGTAGLPGMKGHRGFS----GLDGAKGDAGPAGPKG--EP 289
Query: 191 GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVA---GAAGKAGYPTGTGVGPQAAAA 247
G P AP G GLP G+ P GP G GA G AG P T GP
Sbjct: 290 GSP--GENGAPGQMGPRGLPGERGR-PGAPGPAGARGNDGATGAAGPPGPT--GPAGPPG 344
Query: 248 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
AK AG G G GV G PG PG G AG PA A A
Sbjct: 345 FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGP-PGPAGAAG---PAGNPGADGQPGAKGAN 400
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG----AGIPVVPGA-GIPGA-AVPGVVSPE 361
A G + G PGF PG G G PG G PG +G P PG+ G GA PG V +
Sbjct: 401 GAPG-IAGAPGF-PGARGPSGPQGPG-GPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQ 457
Query: 362 AAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGG 421
A + K GAR G G+P G G G G G G PG GV G G G G
Sbjct: 458 GPPGPAGEEGKRGARGEPGPTGLP----GPPGERG-GPGSRGFPGADGVAGPKGPAGERG 512
Query: 422 VPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA 481
PG P+ A + + GL PG G +PG G G PG
Sbjct: 513 SPGPA-GPKGSPGEAGRPGEAGL-PGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGP 570
Query: 482 PGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGVGAGV 539
PG G A +G G AA K + +G AG G G PG AG
Sbjct: 571 PGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGE 630
Query: 540 PGLGVGAGVPGFGAVPG-ALAAAKAAKYG-AAVPGVLGG---LGALGGVGIPG--GVVG- 591
G AG PGF +PG A +A K G VPG LG GA G G PG GV G
Sbjct: 631 RGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGP 690
Query: 592 AGPAAAAAAAKAAAKAAQFGLVGAAGL-GGLGVGGL-GVPGVGGLGGIP 638
GPA A A G GA G G G GL G+PG G G+P
Sbjct: 691 PGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLP 739
Score = 152 bits (384), Expect = 1e-36
Identities = 221/732 (30%), Positives = 257/732 (35%), Gaps = 117/732 (15%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPG-GVPGGVFYPALGPGGKPLKPVPGGLA 61
G T A PG + + P P G G G PG P GP G+ P G
Sbjct: 443 GDTGAKGEPGPV----GVQGPPGPAGEEGKRGARGEPGPTGLP--GPPGERGGPGSRGFP 496
Query: 62 GA-GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVP 120
GA G+ G PG P G A G G+PG GL S G+ P
Sbjct: 497 GADGVAGPKGPAGERGSPGPAGPKGSPGEAGR-------PGEAGLPGAKGLTGSPGSPGP 549
Query: 121 QPGAGVKPGKVPGVGLPGVYPGGVLPGAR-------FPGVGVLPGVPTGAGVK--PKAPG 171
G PG G PG PG PGAR FPG G P AG + P PG
Sbjct: 550 DGKTG-PPGPAGQDGRPGP-PGP--PGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPG 605
Query: 172 VGGAFAGIPGVGPFGGPQPGVPLGY-----PIKAPK---LPGGYGLPYTTGK-----LPY 218
G G G P P P G P +P LPG G P GK +P
Sbjct: 606 AVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPG 665
Query: 219 GYGPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAG 271
G G +GA G+ G+P GV GP+ A A AK AGA G G G
Sbjct: 666 DLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPG 725
Query: 272 VPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 326
+ G+PG +PG G G P A + K G + P GP PG G
Sbjct: 726 LQGMPGERGAAGLPGPKGDRGDAGPKGADGSPG--KDGVRGLTGPIGPPGPAGAPGDKGE 783
Query: 327 PGA----------GVPG----VGVPG-AGIPVVPGA-------GIPG-------AAVPGV 357
G G PG G PG AG PGA G PG A PG
Sbjct: 784 SGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP 843
Query: 358 VSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVP 417
P GA+ G G P GA GFPG G G PG +G G G P
Sbjct: 844 AGPAGPPGPIGNVGAPGAKGARGSAGPP----GATGFPG-AAGRVGPPGPSGNAGPPGPP 898
Query: 418 GVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG 477
G G G G P + A + + G PG G +PG A G APG G
Sbjct: 899 GPAGKEG-GKGPRGETGPAGRPGEVG-PPGPPGPAGEKGSPG---ADGPAGAPGTPGPQG 953
Query: 478 VGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVG 536
+ GV PG G G + + + A+ G P +G PGL
Sbjct: 954 IAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGP-----MGPPGL--- 1005
Query: 537 AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAA 596
AG PG G PG PG + AK G G GA G G PG V AG +
Sbjct: 1006 AGPPGESGREGAPGAEGSPGR-DGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSG 1064
Query: 597 AAAAAKAAAKAAQFGLVGAAGLGGL-----------GVGGLGVPGVGGLGGI--PPAAAA 643
A A G VGA G G G G+ G G G+ PP
Sbjct: 1065 DRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPG 1124
Query: 644 KAAKYGVAARPG 655
+ G + G
Sbjct: 1125 SPGEQGPSGASG 1136
Score = 150 bits (378), Expect = 5e-36
Identities = 214/682 (31%), Positives = 243/682 (35%), Gaps = 107/682 (15%)
Query: 25 RPG--GVPGA-----IPGGV-PGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFP--- 73
RPG G+PGA PG P G P GP G+ +P P G GA AG+ FP
Sbjct: 528 RPGEAGLPGAKGLTGSPGSPGPDGKTGPP-GPAGQDGRPGPPGPPGARGQAGVMGFPGPK 586
Query: 74 -AVTFPGAL----VPGGVADAAAAYKAAKAGA----------------GLGGVPGVGGLG 112
A PG VPG A K +AGA G G PG GL
Sbjct: 587 GAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLP 646
Query: 113 VSAGAVVPQPGAGVKPGK--VPG-VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPK- 168
AG PG KPG+ VPG +G PG P G FPG + G P AG +
Sbjct: 647 GPAGP----PGEAGKPGEQGVPGDLGAPG--PSGARGERGFPGERGVQGPPGPAGPRGAN 700
Query: 169 -APGVGGAF--AGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 225
APG GA AG PG P PG+ P G GLP G GP G
Sbjct: 701 GAPGNDGAKGDAGAPGA-PGSQGAPGLQ-----GMPGERGAAGLPGPKGDRGDA-GPKGA 753
Query: 226 AGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGG 284
G+ GK G TG +GP A A +G AG G G G PG PG G
Sbjct: 754 DGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGP-PGPAG 812
Query: 285 IAGV----GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-------GVPG 333
AG G P A A G P GP G VG PGA G PG
Sbjct: 813 FAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPG 872
Query: 334 V-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG--ARPG-VGVGGIPTYG- 388
G PGA V P A PG P + G RPG VG G P
Sbjct: 873 ATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAG 932
Query: 389 ----------VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAK 438
GA G PG G+ G GV G+PG G G G+PG P Q + A
Sbjct: 933 EKGSPGADGPAGAPGTPG-PQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGAS 991
Query: 439 AAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV----GVAPGIGPGG 494
+ PG PG+ PG G APG +PG +PG G GP G
Sbjct: 992 GERGP--PGPMGPPGLAGPPGESGREG---APGAEGSPGRDGSPGAKGDRGETGPAGPPG 1046
Query: 495 VAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAV 554
A + V + G P VG VGA P
Sbjct: 1047 APGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP---------------VGARGPAGPQG 1091
Query: 555 PGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVG 614
P + + G G G G G PG GP+ A+ A G G
Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPG 1151
Query: 615 AAGLGGLGVGGLGVPGVGGLGG 636
GL GL G +G PG G G
Sbjct: 1152 KDGLNGL-PGPIGPPGPRGRTG 1172
Score = 144 bits (362), Expect = 3e-34
Identities = 198/620 (31%), Positives = 216/620 (34%), Gaps = 91/620 (14%)
Query: 23 PSRPGGVPGAI-PGGVPG--GVFYPALGPGGKPLKP----VPGGLAGAGLGAGLG--AFP 73
P+ P G G P G PG G+ PA GP G+ KP VPG L G G FP
Sbjct: 624 PAGPAGERGEQGPAGSPGFQGLPGPA-GPPGEAGKPGEQGVPGDLGAPGPSGARGERGFP 682
Query: 74 AVTF----PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPG 129
PG P G A+ A AK AG G PG S GA PG PG
Sbjct: 683 GERGVQGPPGPAGPRG-ANGAPGNDGAKGDAGAPGAPG------SQGA----PGLQGMPG 731
Query: 130 KVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQ 189
+ GLPG P G A P GA P GV G I GP G P
Sbjct: 732 ERGAAGLPG--PKGDRGDAG----------PKGADGSPGKDGVRGLTGPIGPPGPAGAPG 779
Query: 190 ------PGVPLGYPIKAPKLPGGYGLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTGV-- 240
P P G P A PG G P G P G+ GP G G G G P G
Sbjct: 780 DKGESGPSGPAG-PTGARGAPGDRGEPGPPG--PAGFAGPPGADGQPGAKGEPGDAGAKG 836
Query: 241 --GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAA-AAAA 297
GP A A GA G G AG PG G PG G G P+ A
Sbjct: 837 DAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATG-FPGAAGRVGPPGPSGNAGPP 895
Query: 298 AAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGV 357
A K G GP PG VG PG P AG PGA P A PG
Sbjct: 896 GPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGP------AGEKGSPGADGP-AGAPGT 948
Query: 358 VSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG-----FGVGVGGIPGVAGVPG 412
P+ A G R G G+P G G PG G G PG G PG
Sbjct: 949 PGPQGIAGQRGVVGLPGQRGERGFPGLP----GPSGEPGKQGPSGASGERGPPGPMGPPG 1004
Query: 413 VGGVPGVG---GVPGVGISPEAQAAAAAKAAKYGLVP-GVGVAPGVGVAPG-VGVAPGVG 467
+ G PG G PG SP + AK + P G APG APG VG A G
Sbjct: 1005 LAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSG 1064
Query: 468 LAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA--QLRAAAGLGA-----G 520
G A G VG GP G + + R +GL G
Sbjct: 1065 DRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPG 1124
Query: 521 IPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGAL 580
PG G G G PG G G +PG + PG G G
Sbjct: 1125 SPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGP----------PGPRGRTGDA 1174
Query: 581 GGVGIPGGVVGAGPAAAAAA 600
G VG PG GP +A
Sbjct: 1175 GPVGPPGPPGPPGPPGPPSA 1194
Score = 139 bits (349), Expect = 1e-32
Identities = 183/561 (32%), Positives = 200/561 (35%), Gaps = 53/561 (9%)
Query: 101 GLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVP 160
G G PG GLG G PQ G G+ +PG P G PG PG P
Sbjct: 145 GPPGPPGPPGLG---GNFAPQLSYGYDEKSTGGISVPG--PMGPSGPRGLPGPPGAPG-P 198
Query: 161 TGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGY 220
G P PG GA + GP G P G K P PG G P
Sbjct: 199 QGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGK-PGRPGERGPP---------- 247
Query: 221 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 280
GP G G G AG P G + + AK AG AG G G G PG +
Sbjct: 248 GPQGARGLPGTAGLP-----GMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM- 301
Query: 281 GIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA 339
G G+ G G P A A A GAA P GP G G PGA VG G
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAG---PPGPTGPAGPPGFPGA----VGAKGE 354
Query: 340 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGA--RPGV-GVGGIPTYGVGAGGFPG 396
P P V G P A AA A GA +PG G G P GA GFPG
Sbjct: 355 AGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGI-AGAPGFPG 413
Query: 397 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL--VPGVGVAPGV 454
G G G G PG G G G PG + A + G+ PG G
Sbjct: 414 -ARGPSGPQGPGGPPGPKGNSGEPGAPG----SKGDTGAKGEPGPVGVQGPPGPAGEEGK 468
Query: 455 GVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRA 513
A G G+ PG PG PG GVA GP G A S K
Sbjct: 469 RGARGEPGPTGLPGPPGERGGPGSRGFPGADGVA---GPKGPAGERGSPGPAGPKGSPGE 525
Query: 514 AAGLG-AGIP---GLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA 569
A G AG+P GL G PG G PG G PG PGA A +
Sbjct: 526 AGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF-PG 584
Query: 570 VPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 629
G G G G G+PG GPA A A G G G G G G
Sbjct: 585 PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQG-PAGSPGFQ 643
Query: 630 GVGGLGGIPPAAAAKAAKYGV 650
G+ G G PP A K + GV
Sbjct: 644 GLPGPAG-PPGEAGKPGEQGV 663
Score = 111 bits (277), Expect = 2e-24
Identities = 159/499 (31%), Positives = 178/499 (35%), Gaps = 111/499 (22%)
Query: 221 GPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKF----------GAGAAGV 263
GP G AG G+ G P G+ GP A + G G
Sbjct: 121 GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP 180
Query: 264 LPGVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYG--------AAAGLVP 314
+ G G+PG PGA PG G G G P A+ G AG P
Sbjct: 181 MGPSGPRGLPGPPGA-PGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAG-KP 238
Query: 315 GGPG-FGP----GVVGVPG-AGVPGV-------GVPGA----------GIPVVPGA-GIP 350
G PG GP G G+PG AG+PG+ G+ GA G P PG G P
Sbjct: 239 GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAP 298
Query: 351 G----AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPG 406
G +PG A A GA G G PT G GFPG VG G G
Sbjct: 299 GQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPG-PTGPAGPPGFPG-AVGAKGEAG 356
Query: 407 VAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGV 466
G G G GV G PG P A AA A PG PG A G APG+
Sbjct: 357 PQGPRGSEGPQGVRGEPG----PPGPAGAAGPAGN----PGADGQPG---AKGANGAPGI 405
Query: 467 GLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 525
APG A G G G PG G G A S AK G PG
Sbjct: 406 AGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAK-----------GEPG-- 452
Query: 526 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG---- 581
VGV G AG G G PG +PG PG GG G+ G
Sbjct: 453 -PVGVQGPPGPAGEEGKRGARGEPGPTGLPGP-------------PGERGGPGSRGFPGA 498
Query: 582 -GVGIPGGVVG----AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGG 636
GV P G G GPA + A + + GL GA GL G G PG G G
Sbjct: 499 DGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL----TGSPGSPGPDGKTG 554
Query: 637 IPPAAAAKAAKYGVAARPG 655
PP A + + G PG
Sbjct: 555 -PPGPAGQDGRPGPPGPPG 572
Score = 102 bits (253), Expect = 2e-21
Identities = 148/442 (33%), Positives = 162/442 (36%), Gaps = 55/442 (12%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYP-----ALGPGGKPLKPVPGGLAG--------------A 63
P P G PG P G P A G G+P P P G AG
Sbjct: 771 PPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPG 830
Query: 64 GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ-P 122
GA A P A PG + + A AK G G PG G +AG V P P
Sbjct: 831 DAGAKGDAGPPGPAGPAGPPGPIGNVGAP--GAKGARGSAGPPGATGFPGAAGRVGPPGP 888
Query: 123 GAGVKPGKVPGVGLP--GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIP 180
P PG G P G A PG PG P AG K +PG G AG P
Sbjct: 889 SGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKG-SPGADGP-AGAP 946
Query: 181 GV-GPFG-GPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLPYGY----GPGGVAGAA 229
G GP G Q GV +G P + P LPG G P G P G GP G G
Sbjct: 947 GTPGPQGIAGQRGV-VGLPGQRGERGFPGLPGPSGEPGKQG--PSGASGERGPPGPMGPP 1003
Query: 230 GKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGA--IPGIGGIAG 287
G AG P +G + A A GA G G AG PG PGA PG G AG
Sbjct: 1004 GLAGPPGESG--REGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAG 1061
Query: 288 V-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPGAGIPVV 344
G A A GA P GP G G G G+ G G G P
Sbjct: 1062 KSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPG 1121
Query: 345 PGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGI 404
P G PG P S A + +A GA G+ G+P G G PG G G
Sbjct: 1122 P-PGSPGEQGPSGASGPAGPRGPPGSA--GAPGKDGLNGLP----GPIGPPG-PRGRTGD 1173
Query: 405 PGVAGVPGVGGVPGVGGVPGVG 426
G G PG G PG G P G
Sbjct: 1174 AGPVGPPGPPGPPGPPGPPSAG 1195
Score = 80.9 bits (198), Expect = 4e-15
Identities = 118/371 (31%), Positives = 135/371 (36%), Gaps = 49/371 (13%)
Query: 23 PSRPGGVPGAI-----PG--------GVPGGVFYPAL-------GPGGKPLKPVPGGLAG 62
P+ P G PG I PG G PG +P GP G P P G AG
Sbjct: 843 PAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAG 902
Query: 63 AGLGAG-LGAFPAVTFPGALVPGGVADAAA--AYKAAKAGAGLGGVPGVGGLGVSAGAVV 119
G G G PG + P G A A AG G PG G+ G VV
Sbjct: 903 KEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG-VV 961
Query: 120 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARF-----PGVGVLPGV--PTGAGVKPKAPGV 172
PG + G PG+ P PG P PG PG+ P G + APG
Sbjct: 962 GLPGQRGERG-FPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA 1020
Query: 173 GGAFA--GIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAA 229
G+ G PG G G P P G P AP PG G +G G G AG A
Sbjct: 1021 EGSPGRDGSPGAKGDRGETGPAGPPGAP-GAPGAPGPVGPAGKSGDR----GETGPAGPA 1075
Query: 230 GKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV 288
G G G GPQ + + G G G G PG PG+ PG G +G
Sbjct: 1076 GPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGS-PGEQGPSGA 1134
Query: 289 GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG----AGIPVV 344
PA +A A GL GP PG G G P VG PG G P
Sbjct: 1135 SGPAGPRGPPGSAGAPGKDGLNGL--PGPIGPPGPRGRTGDAGP-VGPPGPPGPPGPPGP 1191
Query: 345 PGAGIPGAAVP 355
P AG + +P
Sbjct: 1192 PSAGFDFSFLP 1202
Score = 80.5 bits (197), Expect = 5e-15
Identities = 105/341 (30%), Positives = 127/341 (37%), Gaps = 30/341 (8%)
Query: 345 PGAGIP-GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGG 403
PGA +P G P V P+ + + P G P G G PG G
Sbjct: 82 PGAEVPEGECCP--VCPDGSESPTDQETTGVEGPKGDTG--PRGPRGPAGPPGRD----G 133
Query: 404 IPGVAGVPGVGGVPGVGGVPGVG--ISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVG 461
IPG G+PG G PG G PG+G +P+ K+ VPG G PG
Sbjct: 134 IPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPP 193
Query: 462 VAPGVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQL-----RAAA 515
APG G PG A G +G GP G A K + + A
Sbjct: 194 GAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGAR 253
Query: 516 GL--GAGIPGLGVGVGVPGLGVG---AGVPGLGVGAGVPGFGAVPGALA----AAKAAKY 566
GL AG+PG+ G GL AG G G PG PG + + +
Sbjct: 254 GLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRP 313
Query: 567 GAAVP-GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG 625
GA P G G GA G G PG AGP A A +A G G+ G G+ G
Sbjct: 314 GAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVR-GE 372
Query: 626 LGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 664
G PG G G P A + G PG +P FPG
Sbjct: 373 PGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPG 413
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 170 bits (430), Expect = 5e-42
Identities = 207/683 (30%), Positives = 261/683 (38%), Gaps = 103/683 (15%)
Query: 26 PGGVPGAIPGG---------VPGGVFYPAL-GPGGKPLK--PVPGGLAGAGLGAGLGAFP 73
P G PG P G PGG P L GP G+P K P+PG GL G FP
Sbjct: 602 PPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPG-FP 660
Query: 74 AVT----FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPG 129
FPG PG + G G G PG G+ G + P PG +PG
Sbjct: 661 GPQGDRGFPGT--PGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGP-PGTPGRPG 717
Query: 130 KVPGVGLPGVY-----PGGVLPGARFPGVGVLPGVPTGAGVK-----PKAPGVGGAFA-- 177
G PGV PG LPG + G+ LPG+P G K P PG GA
Sbjct: 718 FNGLPGNPGVQGQKGEPGVGLPGLK--GLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPP 775
Query: 178 GIPGV----GPFGGP----QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAA 229
G+ G+ GP G P PGVP P A PGG G P +G P G+ G
Sbjct: 776 GLQGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSG-------PPGIKGEK 828
Query: 230 GKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGGIAGV 288
G G+P GP+ A +G G LPG GA G+PG PG+ +G +
Sbjct: 829 GFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPG-LPGQQGAPGIPGFPGSKGEMGVMGTP 887
Query: 289 GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAG 348
G P + A + G GP PG+ G G VG+PG
Sbjct: 888 GQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKG----DVGLPGK--------- 934
Query: 349 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVA 408
PG + + G + +G P G+ G P G G+PG
Sbjct: 935 ------PGSMDKVDMGSMKGQKGDQGEKGQIG----PIGEKGSRGDP----GTPGVPGKD 980
Query: 409 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL-VPGVGVAPGVGVAPGVGVAPGVG 467
G G G PG G PG+ +P A K + G+ +PG GV PG +PG+
Sbjct: 981 GQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLP 1040
Query: 468 LAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIP 522
G G PG+G+ PG+ G G+A S + K + G+ G+
Sbjct: 1041 GDKGAKGEKGQAGPPGIGI-PGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLK 1099
Query: 523 GLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 582
G VG PG G+PG G+PG +PG K A +PG G G G
Sbjct: 1100 GSPGSVGYPG---SPGLPGEKGDKGLPGLDGIPG-------VKGEAGLPGTPGPTGPAGQ 1149
Query: 583 VGIPGGVVGAGPAAAAAAAKAAAKAAQF-GLVGAAGLGGLGVGGLGVPGVGGLGGIPPAA 641
G PG P +A + F G GA G G G +G PG+ G GIP
Sbjct: 1150 KGEPGS--DGIPGSAGEKGEPGLPGRGFPGFPGAKGDKG-SKGEVGFPGLAGSPGIP--- 1203
Query: 642 AAKAAKYGVAARPGFGLSPIFPG 664
+ G PG P PG
Sbjct: 1204 -GSKGEQGFMGPPGPQGQPGLPG 1225
Score = 162 bits (410), Expect = 9e-40
Identities = 226/724 (31%), Positives = 282/724 (38%), Gaps = 118/724 (16%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPALG-PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 79
P RPG G+PG GV G P +G PG K L +PG G +G G
Sbjct: 713 PGRPGFNGLPGN--PGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHG 770
Query: 80 ALVPGGVADAAA--AYKAAKAGAGLGGVPGVGGLGVSA--GAVVPQPGAGVKPGKVPGVG 135
A+ P G+ G GVPG+G G G P PG PG G
Sbjct: 771 AIGPPGLQGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGP-PGLSGPPGIKGEKG 829
Query: 136 LPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-------VGPFGG 187
PG +PG +PG + G LPG+ TG P PG GA GIPG +G G
Sbjct: 830 FPG-FPGLDMPGPKGDKGAQGLPGI-TGQSGLPGLPGQQGA-PGIPGFPGSKGEMGVMGT 886
Query: 188 P-QPGVPLGYPIKAPKLPG---GYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQ 243
P QPG P P+ AP LPG +G P ++G G G+ G G G P G +
Sbjct: 887 PGQPGSP--GPVGAPGLPGEKGDHGFPGSSGPR----GDPGLKGDKGDVGLPGKPGSMDK 940
Query: 244 AAAAAAAKAAAKFGA-GAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-------GTPAAAA 295
+ G G G + G G PG PG +PG G AG G P +
Sbjct: 941 VDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPG-VPGKDGQAGQPGQPGPKGDPGISG 999
Query: 296 AAAAAAKAAKYGAAAGL-VPGGPGFGPGVVGVPGA-GVPGV-GVPGA----GIPVVPGAG 348
A G+ G+ +PG PG GV G+PG G PG+ G GA G PG G
Sbjct: 1000 TPGAPGLPGPKGSVGGMGLPGTPG-EKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIG 1058
Query: 349 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVA 408
IPG + G + A + G + +G+ G+P G G PG VG G PG+
Sbjct: 1059 IPG--LRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPG-SPGLKGSPG-SVGYPGSPGLP 1114
Query: 409 GVPGVGGVPGVGGVPGV----GI----SPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 460
G G G+PG+ G+PGV G+ P A + G +PG G PG
Sbjct: 1115 GEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDG-IPGSAGEKGEPGLPGR 1173
Query: 461 GVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-------------GPGGVAAAAKSAAKVAA 507
G PG A G + G PG+ +PGI GP G S
Sbjct: 1174 GF-PGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATE 1232
Query: 508 KAQLRAAAGLGAGIPGLGVGVGVPGL----GVGA--------GVPGLGVGAGVPGFGAVP 555
+ G+PGL +G PGL GV G PG+ G PGF +P
Sbjct: 1233 GPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMP 1292
Query: 556 G-----ALAAAKAAKYGAAVPGVLG--GLGALGGV-------GIPGGVVGAGPAAAAAAA 601
G + +K VPG G GL L G+ G+PG GP
Sbjct: 1293 GIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPY 1352
Query: 602 KAAAKAAQFGLVGAAGLGGL-GVGGL----GVPGVGGLGGIPPAAAAKAAKYGVAARPGF 656
+ GL G G GL G+ GL G GV GL GIP G PGF
Sbjct: 1353 DII--KGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVGIP----------GPPGIPGF 1400
Query: 657 GLSP 660
+P
Sbjct: 1401 DGAP 1404
Score = 141 bits (355), Expect = 2e-33
Identities = 212/697 (30%), Positives = 260/697 (37%), Gaps = 181/697 (25%)
Query: 26 PGGVPGAIPGGVPGGVFYPALGPGGKPLKPV---PGGLAGAGLGAGLGAFPAVTFPGALV 82
P G+PG++ G PG P +GP G P P GL+G G FP FPG +
Sbjct: 786 PPGLPGSV--GSPG---VPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPG--FPGLDM 838
Query: 83 PGGVADAAAAYKAAKAGA-------GLGGVPGVGGLGVSAG--AVVPQPGAGVKPGKVPG 133
PG D A G G G PG+ G S G V+ PG PG V
Sbjct: 839 PGPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGA 898
Query: 134 VGLPGVYPGGVLPGARFP----------GVGVLPGVP----------------------- 160
GLPG PG+ P G LPG P
Sbjct: 899 PGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQ 958
Query: 161 ------TGAGVKPKAPGVGG--AFAGIPGV-GPFGGP----QPGVPLGYPIKAPK-LPGG 206
G+ P PGV G AG PG GP G P PG P G P PK GG
Sbjct: 959 IGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAP-GLP--GPKGSVGG 1015
Query: 207 YGLPYTTGKL-------PYGY----GPGGVAGAAGKAGYPTGTGV-------GPQAAAAA 248
GLP T G+ P G G G G G+AG P G G+ G Q A
Sbjct: 1016 MGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAG-PPGIGIPGLRGEKGDQGIAGF 1074
Query: 249 AAKAAAKFGAGAAGV--LPG----------VGGAGVPGVPG-----AIPGIGGIAGV--- 288
K G+ G+ +PG VG G PG+PG +PG+ GI GV
Sbjct: 1075 PGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGE 1134
Query: 289 -GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPG-------------V 334
G P A + + G+ +PG G G G+PG G PG V
Sbjct: 1135 AGLPGTPGPTGPAGQKGEPGSDG--IPGSAG-EKGEPGLPGRGFPGFPGAKGDKGSKGEV 1191
Query: 335 GVPG-AGIPVVPGA-------GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP 385
G PG AG P +PG+ G PG PG+ A K + G + G+ G+P
Sbjct: 1192 GFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDR-GPQGQPGLPGLP 1250
Query: 386 TYGVGAGGFPGF-GV----------GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAA 434
+G G PG GV G G+PG G PG G+PG+GG PG+
Sbjct: 1251 G-PMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGI--------- 1300
Query: 435 AAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPG 493
+K + P PGV PG G+ G+ G PG PG GP
Sbjct: 1301 ---TGSKGDMGP-----PGV---PGFQGPKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPP 1349
Query: 494 GVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA 553
G K + GL G+PG GV GL G+PG G+PGF
Sbjct: 1350 GPYDIIKGEPGLPGPEGPPGLKGL-QGLPGPKGQQGVTGL---VGIPG---PPGIPGFDG 1402
Query: 554 VPGALAAAKAAKYGAAVP-GVLGGLGALGGVGIPGGV 589
PG + + G A P G G G G G+PG +
Sbjct: 1403 APG-----QKGEMGPAGPTGPRGFPGPPGPDGLPGSM 1434
Score = 132 bits (332), Expect = 1e-30
Identities = 209/702 (29%), Positives = 257/702 (36%), Gaps = 103/702 (14%)
Query: 22 HPSRPG--GVPGAI----PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 75
+P PG G+PG P G+PG G G+ P GL G G P +
Sbjct: 101 YPGNPGLPGIPGQDGPPGPPGIPG-----CNGTKGERGPLGPPGLPGFAGNPGPPGLPGM 155
Query: 76 TF-PGAL---VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKPG 129
PG + VPG + + G G+PG+ G G P PG PG
Sbjct: 156 KGDPGEILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPG 215
Query: 130 KVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP-------GVGG--AFAGIP 180
+ +GL P G GV PGVP A V+ K G G F G+P
Sbjct: 216 EKGQMGLSFQGPKG---DKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMP 272
Query: 181 GVGPFGGPQPGVPLGYPIK--------APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKA 232
GVG G P P G P K +P PG G P G+ GP G G AG
Sbjct: 273 GVGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR----QGPQGEKGEAGPP 328
Query: 233 GYP-TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTP 291
G P G GP + + G G G G PG+PG PG G+ G
Sbjct: 329 GPPGIVIGTGP------LGEKGERGYPGTPGPRGEPGPKGFPGLPGQ-PGPPGLPVPGQA 381
Query: 292 AAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGA-GVPGV---------GVPG- 338
A + G +PG G PG G PG G PG G PG
Sbjct: 382 GAPGFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPGPPGQPGYTNGIVECQPGPPGD 441
Query: 339 AGIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPG-------VGVGGIPTYGVG 390
G P +PG PG G + + Y PG +G G P G
Sbjct: 442 QGPPGIPGQ--PGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIGFPGQPG-AKG 498
Query: 391 AGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPG---VGISPEAQAAAAAKAAKYGLV-- 445
G PG GV G+PG G PG+ G PG G PG + + + G+
Sbjct: 499 DRGLPGRD-GVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMTGR 557
Query: 446 ---PGVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKS 501
PG PG+ PG +PG VGL G GVG G GP G
Sbjct: 558 AGSPGRDGHPGL---PGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYG----P 610
Query: 502 AAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAA 561
A + K Q A G G PGL G PG V +PG G+PG PG
Sbjct: 611 AGPIGDKGQ--AGFPGGPGSPGLPGPKGEPGKIV--PLPGPPGAEGLPGSPGFPGP-QGD 665
Query: 562 KAAKYGAAVPGVLGGLGALG--GVGIPG--GVVGA-GPAAAAAAAKAAAKAAQFGLVGAA 616
+ PG+ G GA+G G+G PG G G G + GL G
Sbjct: 666 RGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNP 725
Query: 617 GL-GGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 655
G+ G G G+G+PG+ GL G+P P + GV PG
Sbjct: 726 GVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPG 767
Score = 114 bits (286), Expect = 2e-25
Identities = 148/475 (31%), Positives = 183/475 (38%), Gaps = 95/475 (20%)
Query: 23 PSRPG--------GVPGA--IPG--GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLG 70
P +PG G PGA +PG G GG+ P PG K + +PG GL G
Sbjct: 986 PGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGT-PGEKGVPGIPGPQGSPGLPGDKG 1044
Query: 71 AFPA---VTFPGALVPG--------GVAD--AAAAYKAAKAGAGLGGVPGVGGLGVSAGA 117
A PG +PG G+A + K K G+ G+PG GL S G+
Sbjct: 1045 AKGEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGS 1104
Query: 118 VVPQPGAGVKPGK-----VPGV-GLPGVYPGGVLPGARFP-------GVGVLPGVPTGAG 164
V PG+ PG+ +PG+ G+PGV LPG P G G+P AG
Sbjct: 1105 V-GYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAG 1163
Query: 165 VKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGG 224
K + G F G PG G + V P L G G+P + G+ + GP G
Sbjct: 1164 EKGEPGLPGRGFPGFPGAKGDKGSKGEVGF------PGLAGSPGIPGSKGEQGF-MGPPG 1216
Query: 225 VAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGV--LPGVGGA----GVPGVPGA 278
G G G P GP+ + G G LPG+ G G PG PGA
Sbjct: 1217 PQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGA 1276
Query: 279 IPGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPG 333
PG+ G G G P + G PG PGF G G+PG G+ G
Sbjct: 1277 -PGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGP-----PGVPGF-QGPKGLPGLQGIKG 1329
Query: 334 ----VGVPGA-GIPVVPGA--------GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 380
GVPGA G+P PG G PG +PG P G + G
Sbjct: 1330 DQGDQGVPGAKGLPGPPGPPGPYDIIKGEPG--LPGPEGPPGLKGLQGLPGPKGQQGVTG 1387
Query: 381 VGGIPTYGVGAGGFPGFG-----------VGVGGIPGVAGVPGVGGVPGVGGVPG 424
+ GIP G G PGF G G G G PG G+PG G PG
Sbjct: 1388 LVGIP----GPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPG 1438
Score = 86.7 bits (213), Expect = 7e-17
Identities = 156/537 (29%), Positives = 181/537 (33%), Gaps = 113/537 (21%)
Query: 201 PKLPGGYGLPYTTGKLPYG-YGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGA 258
P L G G P G P G GP G G G+ G P G GP
Sbjct: 54 PGLQGVIGFPGMQG--PEGPQGPPGQKGDTGEPGLPGTKGTRGPP--------------- 96
Query: 259 GAAGVLPGVGGAGVPGVPG--------AIPGIGGIAG----VGTPAAAAAA------AAA 300
GA+G G G+PG+PG IPG G G +G P A
Sbjct: 97 GASGY---PGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLP 153
Query: 301 AKAAKYGAAAGLVPG----GPGFGPGVVGVPG-AGVPG----VGVPG-AGIPVVPG-AGI 349
G G VPG G PG+ G PG G+PG VG PG G P PG G
Sbjct: 154 GMKGDPGEILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGP 213
Query: 350 PG------------------------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP 385
PG VPG + A K K G + G G+P
Sbjct: 214 PGEKGQMGLSFQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEK-GQKGEPGFQGMP 272
Query: 386 TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GI----SPEAQAAAAAKAA 440
GVG G PG G G PG G G G PG G PG G+ P+ + A
Sbjct: 273 --GVGEKGEPG-KPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPG 329
Query: 441 KYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAK 500
G+V G G G G PG PG PG+ PG PG+ G A A
Sbjct: 330 PPGIVIGTGPLGEKG-ERGYPGTPGPRGEPGPKGFPGLPGQPG---PPGLPVPGQAGAPG 385
Query: 501 SAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF-GAVPGALA 559
+ K G P G +PG G+PG G PG G G +
Sbjct: 386 FPGERGEKGD--------RGFP----GTSLPGPSGRDGLPGPPGSPGPPGQPGYTNGIVE 433
Query: 560 AAKAAKYGAAVPGVLGGLGALGGVGIPG---------GVVG-AGPAAAAAAAKAAAKAAQ 609
PG+ G G +G +G G + G GP Q
Sbjct: 434 CQPGPPGDQGPPGIPGQPGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIGFPGQ 493
Query: 610 FGLVGAAGLGGL-GVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G G GL G GV G+ G G GL G P A Y G P FPG
Sbjct: 494 PGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPG 550
Score = 82.8 bits (203), Expect = 1e-15
Identities = 112/372 (30%), Positives = 140/372 (37%), Gaps = 62/372 (16%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPG--------GVPG--AIPG-----GVPGGVFYPALG 47
G+ PG+ S+ +P PG G+PG IPG G+PG G
Sbjct: 1088 GIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP--GPTG 1145
Query: 48 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPG 107
P G+ +P G+ G+ G P FPG PG D + K GL G PG
Sbjct: 1146 PAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPG--FPGAKGDKGS--KGEVGFPGLAGSPG 1201
Query: 108 VGGLGVSAGAVVP-----QPGAGVKPGKVP----GVGLPGVYPGGVLPGARFPGVGVLPG 158
+ G G + P QPG PG G P PG LPG PG PG
Sbjct: 1202 IPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPG--LPG--LPGPMGPPG 1257
Query: 159 VPTGAGVK--------PKAPGVGG-----AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPG 205
+P GVK P APGV G F G+PG+G G P P G
Sbjct: 1258 LPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQG 1317
Query: 206 GYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVL 264
GLP G G+ G G G P G+ GP + G
Sbjct: 1318 PKGLP----------GLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGP 1367
Query: 265 PGVGGA-GVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPG 322
PG+ G G+PG G G+ G+ G+ G P A + + G A P G PG
Sbjct: 1368 PGLKGLQGLPGPKGQ-QGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPG 1426
Query: 323 VVGVPGA-GVPG 333
G+PG+ G PG
Sbjct: 1427 PDGLPGSMGPPG 1438
Score = 71.2 bits (173), Expect = 3e-12
Identities = 112/386 (29%), Positives = 137/386 (35%), Gaps = 99/386 (25%)
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGP----GVVGVPGA-GVPGVGVPGAGIPVVP 345
PAA ++AA G AG G G GV G G G+PG+
Sbjct: 13 PAALLLHEEHSRAAAKGGCAG-----SGCGKCDCHGVKGQKGERGLPGL----------- 56
Query: 346 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV----GVGGIPTYGVGAGGFPGFGVGV 401
G+ G PG+ PE + G PG+ G G P GA G+PG
Sbjct: 57 -QGVIG--FPGMQGPEGPQGPPGQKGDTG-EPGLPGTKGTRGPP----GASGYPGN---- 104
Query: 402 GGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVG 461
PG+ G+PG G PG G+PG K + L P PG+ PG
Sbjct: 105 ---PGLPGIPGQDGPPGPPGIPGCN---------GTKGERGPLGP-----PGL---PGFA 144
Query: 462 VAPGVGLAPGVGVAPG--VGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA 519
PG PG+ PG +G PG+ L+ G
Sbjct: 145 GNPGPPGLPGMKGDPGEILGHVPGM-------------------------LLKGERGF-P 178
Query: 520 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGA 579
GIPG G+PGL G PG G PG PG + + G + G G G
Sbjct: 179 GIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPG-----EKGQMGLSFQGPKGDKGD 233
Query: 580 LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGIP 638
G G PG G A A K + G G G G+ GVG G PG G G P
Sbjct: 234 QGVSGPPG---VPGQAQVQEKGDFATKGEK-GQKGEPGFQGMPGVGEKGEPGKPGPRGKP 289
Query: 639 PAAAAKAAKYGVAARPGFGLSPIFPG 664
K G PGF P +PG
Sbjct: 290 ----GKDGDKGEKGSPGFPGEPGYPG 311
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 169 bits (429), Expect = 6e-42
Identities = 218/686 (31%), Positives = 250/686 (36%), Gaps = 94/686 (13%)
Query: 26 PGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGG 85
P G PG P G PG +P PG + PG AG G PGA+ P G
Sbjct: 175 PAGPPG--PPGPPGTSGHPG-SPGSPGYQGPPGEPGQAGPSGPPGP------PGAIGPSG 225
Query: 86 VA--DAAAAYKAAKAGAGLGGVPGVGGLGVSAG--AVVPQPGAGVKPGKVPGVGLPGVYP 141
A D + GL G PG+ G G + G + G+ G PG+
Sbjct: 226 PAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKG 285
Query: 142 GGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKA 200
LPG PG G P G +P PG GA G G P P P
Sbjct: 286 ENGLPGENGAPGPMGPRGAPGERG-RPGLPGAAGARGNDGARGSDGQPGPPGP------- 337
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAG 259
PG G P + G G G AG+ G G P G GPQ A A G
Sbjct: 338 ---PGTAGFPGSPG----AKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGING 390
Query: 260 AAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 319
+ G +G AG+PG PG + G G A A + K GA P G
Sbjct: 391 SPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERG 450
Query: 320 GPGVVGVPGA----------GVPGV-GVPGA----GIPVVPGA----GIPGAAVP----G 356
G+ GVPGA G PG G+PGA G P G GIPG P G
Sbjct: 451 EAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERG 510
Query: 357 VVSPEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPG--FGVGVGGIPGVAGVPG 412
P AA + + G G G+ G+P G G+ G PG G G PG G G
Sbjct: 511 APGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSG 570
Query: 413 VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLV--PGVGVAPGVGVAPGVGVAPGV---- 466
G PGV G PG P+ A K + G PG PG G PG
Sbjct: 571 PRGQPGVMGFPG----PKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPG 626
Query: 467 ----GLAP----GVGVAPGVGVAPGVGVAPG-IGPGGVAAA--AKSAAKVAAKAQLRAAA 515
P G+ PG G PG PG GP G A A A A R
Sbjct: 627 GDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPP 686
Query: 516 GLGAGIPGLGVGVGVPGLGVG---AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPG 572
GL AG PGL G G PG G AG PG AG PG +PG + G PG
Sbjct: 687 GL-AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPG-------ERGGLGSPG 738
Query: 573 VLGGLGALGGV---GIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 629
G G GG G+PG GP A + G GA GL G+ G G P
Sbjct: 739 PKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGI-AGPRGSP 797
Query: 630 GVGGLGGIPPAAAAKAAKYGVAARPG 655
G G G PP A G PG
Sbjct: 798 GERGETG-PPGPAGFPGAPGQNGEPG 822
Score = 165 bits (418), Expect = 1e-40
Identities = 218/680 (32%), Positives = 246/680 (36%), Gaps = 82/680 (12%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
PS P G PGAI P G G G+P +P GL G G P FPG
Sbjct: 211 PSGPPGPPGAIGPSGPAG----KDGESGRPGRPGERGLPGPPGIKGPAGIPG--FPGMKG 264
Query: 83 PGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPG 142
G D K GL G G+ G + G + P+ GA PG+ GLPG
Sbjct: 265 HRGF-DGRNGEKGETGAPGLKGENGLPGENGAPGPMGPR-GA---PGERGRPGLPGAAGA 319
Query: 143 GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGP----QPGVPLGY-- 196
GAR P P G P +PG G G G P +PG P G+
Sbjct: 320 RGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPG-PQGHAG 378
Query: 197 PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKF 256
P PG G P G++ GP G+ GA G G GP A A +
Sbjct: 379 AQGPPGPPGINGSPGGKGEM----GPAGIPGAPGLMG-----ARGPPGPAGANGAPGLRG 429
Query: 257 GAGAAGV-----LPGV----GGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
GAG G PG G AG+PGVPGA G G P A AA + G
Sbjct: 430 GAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGER---G 486
Query: 308 AAAGLVPGGPGFGPGVVGVPG-AGVPG-------VGVPGA-GIPVVPG-AGIPGA----- 352
A P GP PG G G G PG G PG G+P PG G+PG+
Sbjct: 487 APGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPG 546
Query: 353 --AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGVA 408
PG + + G R GV G P GA G G G GG PG
Sbjct: 547 SDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG-PGPQ 605
Query: 409 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL--VPGVGVAPGVGVAPGV------ 460
G PG G G G PG P GL +PG G PG PG
Sbjct: 606 GPPGKNGETGPQGPPG-PTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGD 664
Query: 461 GVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA- 519
APG G APG PG+ APG+ G + A AAG
Sbjct: 665 AGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGL 724
Query: 520 -GIPGLGVGVGVPGLGVGAGVPGLGVGA-GVPGFGAVPGALAAAKAAKYGAAVPGVLGGL 577
G+PG G+G PG G PG G GA GVPG G PG G
Sbjct: 725 QGMPGERGGLGSPGPKGDKGEPG-GPGADGVPGKDGPRGPTGP-------IGPPGPAGQP 776
Query: 578 GALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLG 635
G G G PG AGP + G GA G G G G G PG G G
Sbjct: 777 GDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEG 836
Query: 636 GIPPAAAAKAAKYGVAARPG 655
G PP A G A PG
Sbjct: 837 G-PPGVAGPPGGSGPAGPPG 855
Score = 159 bits (401), Expect = 1e-38
Identities = 210/653 (32%), Positives = 242/653 (37%), Gaps = 83/653 (12%)
Query: 23 PSRPGGVPGAI--PG-----GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 75
P+ PGG G PG G+PG P G GKP +P P G AGA
Sbjct: 622 PTGPGGDKGDTGPPGPQGLQGLPGTGGPP--GENGKPGEPGPKGDAGA------------ 667
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVK--PGKVPG 133
PGA PGG DA A + GL G PG+ G AG P+ G G PG
Sbjct: 668 --PGA--PGGKGDAGAP--GERGPPGLAGAPGLRG---GAGPPGPEGGKGAAGPPGPPGA 718
Query: 134 VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVP 193
G PG+ +PG R G+G PG P G +P PG G GP G P P
Sbjct: 719 AGTPGLQG---MPGER-GGLGS-PG-PKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGP 772
Query: 194 LGYPIKAPKLPGGY-GLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAK 251
G P K GG GLP G P G G G G G AG+P G +
Sbjct: 773 AGQP--GDKGEGGAPGLPGIAG--PRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERG 828
Query: 252 AAAKFGAGAA-GVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAA 310
A + G G GV GG+G G PG G G P AA A G+
Sbjct: 829 APGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNG 888
Query: 311 GLVPGGPGFGPGVVGVPG-AGVPGV-GVPGAGIPVVPGAGIPGA-AVPGVVSPEAAAKAA 367
P GP PG G PG AG G G PG P AG PG PG P A
Sbjct: 889 NPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPK-GDAGQPGEKGSPGAQGPPGAPGPL 947
Query: 368 AKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGI 427
A GAR G G+P G G PG G+ G +G PG G+ G G PG
Sbjct: 948 GIAGITGARGLAGPPGMP----GPRGSPG----PQGVKGESGKPGANGLSGERGPPG--- 996
Query: 428 SPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVA 487
P+ A A + PG PG PG +PG G +PG APG
Sbjct: 997 -PQGLPGLAGTAGE----PGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGP 1051
Query: 488 PG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA 546
PG +GP G + + + A A AG G PG G G G G+
Sbjct: 1052 PGPVGPAG-KSGDRGESGPAGPAGAPGPAG-SRGAPGPQGPRGDKGETGERGAAGIKGHR 1109
Query: 547 GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 606
G PG PG+ PG G GA+G G G GP+ +
Sbjct: 1110 GFPGNPGAPGS-------------PGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGH 1156
Query: 607 AAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFG 657
G G G G G G PG G G P A G AA G G
Sbjct: 1157 PGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIG 1209
Score = 126 bits (317), Expect = 6e-29
Identities = 171/533 (32%), Positives = 199/533 (37%), Gaps = 91/533 (17%)
Query: 160 PTGAGVKPKAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPY 218
P G P PG+ G G PG+ G G P P G P P Y Y + +
Sbjct: 104 PQGPKGDPGPPGIPGR-NGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKS 162
Query: 219 GYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGA 278
G GG+AG G AG P GP G +G G G G PG
Sbjct: 163 GVAVGGLAGYPGPAGPP-----GPPGP------------PGTSGHPGSPGSPGYQGPPGE 205
Query: 279 IPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPG-AGVPGV 334
PG G +G G P A + A K + G PG PG PG G+ G AG+PG
Sbjct: 206 -PGQAGPSGPPGPPGAIGPSGPAGKDGESGR-----PGRPGERGLPGPPGIKGPAGIPGF 259
Query: 335 -GVPG-------------AGIPVVPGA-GIPGA-AVPGVVSPEAA---------AKAAAK 369
G+ G G P + G G+PG PG + P A AA
Sbjct: 260 PGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGA 319
Query: 370 AAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 429
GAR G G P G GFPG G G G AG PG G PG G PG P
Sbjct: 320 RGNDGARGSDGQPG-PPGPPGTAGFPG-SPGAKGEVGPAGSPGSNGAPGQRGEPG----P 373
Query: 430 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
+ A A PG+ +PG G PG APG+ A G G APG
Sbjct: 374 QGHAGAQGPPGP----PGINGSPGGKGEMGPAGIPG---APGLMGARGPPGPAGANGAPG 426
Query: 490 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVP 549
+ GG K+ AK + R G AGIP GVPG G G G P
Sbjct: 427 L-RGGAGEPGKNGAK--GEPGPRGERG-EAGIP------GVPG---AKGEDGKDGSPGEP 473
Query: 550 GFGAVPGALAAAKAAKY-GAAVP-GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKA 607
G +PGA A + G A P G+ G G G G PG AGP AA
Sbjct: 474 GANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPG---PAGPRGAAGEPGRDGVP 530
Query: 608 AQFGLVGAAGLGGLGVGGLGVPGVGGLGGI-----PPAAAAKAAKYGVAARPG 655
G+ G G G G G G PG G G PP + + GV PG
Sbjct: 531 GGPGMRGMPGSPG-GPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPG 582
Score = 125 bits (314), Expect = 1e-28
Identities = 161/523 (30%), Positives = 190/523 (36%), Gaps = 98/523 (18%)
Query: 188 PQPGVPLG-------YPIKAPKLP-------GGYGLPYTTGKLPYGYGPGGVAGAAGKAG 233
P P +P G P AP P G G P G +P G G+ G G G
Sbjct: 75 PNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPG-IPGRNGDPGIPGQPGSPG 133
Query: 234 YPTGTGV------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 287
P G+ GPQ + K G G+ G AG PG PG PG G G
Sbjct: 134 SPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP-PGTSGHPG 192
Query: 288 -VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG-VGVPG----AG 340
G+P +A P GP PG +G G AG G G PG G
Sbjct: 193 SPGSPGYQGPPGEPGQAG---------PSGPPGPPGAIGPSGPAGKDGESGRPGRPGERG 243
Query: 341 IPVVPG----AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG-----VGA 391
+P PG AGIPG PG+ + + GA G G+P +G
Sbjct: 244 LPGPPGIKGPAGIPG--FPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGP 301
Query: 392 GGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVA 451
G PG G G+PG AG G G G G PG P + AK G V G +
Sbjct: 302 RGAPG-ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAK-GEVGPAG-S 358
Query: 452 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPGGVAAAAKSAAKVAA 507
PG APG PG G PG PG+ +PG +GP G+
Sbjct: 359 PGSNGAPGQRGEPGPQGHAGAQGPPG---PPGINGSPGGKGEMGPAGI------------ 403
Query: 508 KAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG 567
G PGL G PG G PGL GAG PG G + +
Sbjct: 404 -----------PGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGE-PGPRGERGE 451
Query: 568 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-----G 622
A +PGV G G G G P G GA AA + A G G AG G+
Sbjct: 452 AGIPGVPGAKGEDGKDGSP-GEPGANGLPGAAGERGAP-----GFRGPAGPNGIPGEKGP 505
Query: 623 VGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGG 665
G G PG G P AA + + GV PG P PGG
Sbjct: 506 AGERGAPGPAG----PRGAAGEPGRDGVPGGPGMRGMPGSPGG 544
Score = 100 bits (248), Expect = 6e-21
Identities = 149/490 (30%), Positives = 168/490 (34%), Gaps = 94/490 (19%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGA 80
P PG GVPG P G P GP G+P GG G AG P G
Sbjct: 746 PGGPGADGVPGKDGPRGPTGPIGPP-GPAGQPGDKGEGGAPGLPGIAGPRGSPGER--GE 802
Query: 81 LVPGGVAD--AAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGV-GLP 137
P G A A G G G PG G G G P G+G P PG G+
Sbjct: 803 TGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSG--PAGPPGPQGVK 860
Query: 138 GVY--PGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPL 194
G PGG PGA FPG LPG P G+ P PG G+ GP G G P
Sbjct: 861 GERGSPGG--PGAAGFPGARGLPG-PPGSNGNPGPPGPSGSPGKDGPPGPAGNT--GAPG 915
Query: 195 GYPIKAPK----LPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV----GPQA 244
+ PK PG G P G P G G+ GA G AG P G GPQ
Sbjct: 916 SPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQG 975
Query: 245 AAAAAAKAAAKFGAGAAGV-----LPGVGGA-------------GVPGVPGAIPGIGGIA 286
+ K A +G G LPG+ G G+PG G+ G G
Sbjct: 976 VKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRG 1035
Query: 287 GVGTPAAAAAAA------AAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVP-------- 332
G+P A A A K G P GP PG G GA P
Sbjct: 1036 ENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKG 1095
Query: 333 ------GVGVPG-AGIPVVPGA-GIPGAA-------VPGVVSPEAAAKAAAKAAKYGARP 377
G+ G G P PGA G PG A PG P + K G
Sbjct: 1096 ETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSG 1155
Query: 378 GVGVGGIP--------TYGVGAGGFPGF----------GVGVGGIPGVAGVPGVGGVPGV 419
G G P G+ G PG G GG+ G A + G+GG
Sbjct: 1156 HPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGV-GAAAIAGIGGEKAG 1214
Query: 420 GGVPGVGISP 429
G P G P
Sbjct: 1215 GFAPYYGDEP 1224
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 160 bits (405), Expect = 4e-39
Identities = 217/706 (30%), Positives = 262/706 (37%), Gaps = 137/706 (19%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAG-------------LGA 67
P PG G PG +P GP G P P GL G +G
Sbjct: 428 PGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGT 487
Query: 68 GLGAFPAVT-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGV 126
G+ P PG P G K K AG G G+ G+ PGA
Sbjct: 488 GISGPPGQPGLPGLPGPPGSL-GFPGQKGEKGQAGATGPKGLPGI----------PGAPG 536
Query: 127 KPGKVPGVGLPG---VYPG-----GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAG 178
PG G PG +PG G L PG+ LPG P G+ P PG G G
Sbjct: 537 APGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGL-PGLPGPKGEPGG 595
Query: 179 IPGVGPFGGP-QPGVPLGYPIK-APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPT 236
I G G P PG+P G P P P G+G P G+ G GVAG G+ G P
Sbjct: 596 ITFKGERGPPGNPGLP-GLPGNIGPMGPPGFGPPGPVGEK----GIQGVAGNPGQPGIPG 650
Query: 237 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGG------IAGVGT 290
G P K G G + G G+PG PG +PGI G I G+G
Sbjct: 651 PKG-DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG-LPGIPGSKGEPGIPGIGL 708
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPG-VGVPGA-GIPVVPGA 347
P PG GF PG+ G PGA G PG +G+ G G P PG
Sbjct: 709 PGP--------------------PGPKGF-PGIPGPPGAPGTPGRIGLEGPPGPPGFPGP 747
Query: 348 -GIPGAAVPGVVSPEAAAKAAAKAAKYGAR--------PG-VGVGGIP--TYGVGAGGFP 395
G PG A+PG P G R PG G+ G+P VG G P
Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQP 807
Query: 396 GF-------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGV 448
G G+GV G PG G+PG G PG+ G+PG P PG+
Sbjct: 808 GPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGI 867
Query: 449 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAK 508
APG PG +PG+ G PG G+ PG PG + +S
Sbjct: 868 PGAPGPIGPPG---SPGLPGKAGASGFPGTKGEMGMMGPPG-PPGPLGIPGRS------- 916
Query: 509 AQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGA----LAAAKAA 564
G+PGL G+ G G G G PG PG L +K
Sbjct: 917 -----------GVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGE 965
Query: 565 KYGAAVPGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKA-AAKAAQFGLVGAAGL 618
K +PG+ G G G G+PG G+ G K Q GL+G GL
Sbjct: 966 KGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGL 1025
Query: 619 GGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G +G +G PG G+ G PP + GV +PG SP PG
Sbjct: 1026 KGT-IGDMGFPGPQGVEG-PPGPS------GVPGQPG---SPGLPG 1060
Score = 155 bits (393), Expect = 9e-38
Identities = 209/673 (31%), Positives = 257/673 (38%), Gaps = 95/673 (14%)
Query: 18 LSILHPSRPGGVPGAI--PG--GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFP 73
+ + P P G+PG I PG G+PG P GP G + PG G+ G
Sbjct: 818 IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDP--GPPGLDVPGPPGERGSPGIPGAPGPIG 875
Query: 74 AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAGAVVP----------QP 122
PG +PG A+ + K G+ G PG G LG+ + VP QP
Sbjct: 876 PPGSPG--LPGKAG--ASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQP 931
Query: 123 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG--AFAGIP 180
G G+ G PG+ PG PG P + G G+ P PGV G + G+P
Sbjct: 932 GLPGPTGEKGSKGEPGL-PGP--PGPMDPNLLGSKGEKGEPGL-PGIPGVSGPKGYQGLP 987
Query: 181 GVG--PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGT 238
G P QPG+P G P PK G GLP G + GP G+ G G G+P
Sbjct: 988 GDPGQPGLSGQPGLP-GPP--GPK--GNPGLPGQPGLI----GPPGLKGTIGDMGFPGPQ 1038
Query: 239 GV-GPQAAAAAAAKAAAKFGAGAAGVL--PGVGGAGVPGVPG--------AIPGIGGIAG 287
GV GP + + + G G PG+ G+PG+PG PG GI G
Sbjct: 1039 GVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKG 1098
Query: 288 -VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG-VGVPGAGI 341
VG P + PG PGF PG G PG +G PG G+PG
Sbjct: 1099 SVGDPGLPGLPGTPGAKGQ--------PGLPGF-PGTPGPPGPKGISGPPGNPGLPGEPG 1149
Query: 342 PVVPGAGIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIP-----TYGVGAG 392
PV G G PG P G + A + + G +PG G G P + G G
Sbjct: 1150 PV-GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG-QPGFGNPGPPGLPGLSGQKGDG 1207
Query: 393 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP-EAQAAAAAKAAKYGLVPGVGVA 451
G PG G G+PG G PG G PGV G PG SP A G PG
Sbjct: 1208 GLPGIP-GNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQG-PPGRPGP 1265
Query: 452 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAA 507
G PG PG+ G+ G PG+ PG+ GP G+
Sbjct: 1266 TGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGM 1325
Query: 508 KAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG 567
K G PGL G PG+ +GVPG G PG PG +
Sbjct: 1326 K-----------GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQS 1374
Query: 568 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG-LGVGGL 626
+ G G G G G+ G GP + GL G G GG G GL
Sbjct: 1375 IIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGL 1434
Query: 627 -GVPGVGGLGGIP 638
G PG GL G P
Sbjct: 1435 PGQPGTRGLDGPP 1447
Score = 130 bits (327), Expect = 4e-30
Identities = 205/733 (27%), Positives = 258/733 (35%), Gaps = 141/733 (19%)
Query: 1 MAGLTAAAPRPGVLLLLLSIL-HPSRPGGVPGAIPG---------GVPGGVFYPAL-GPG 49
+ G++ AA G+ LL LS+ P+ G PG G G +P L G
Sbjct: 3 LRGVSLAA---GLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHP 59
Query: 50 GKPLKPVPGGLAGAGLGAGLGAFPAVTFP-GALVPGGVADAAAAYKAAKAGAGLGGVPGV 108
G P P P G G G P P G P G+ G G PG+
Sbjct: 60 GLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLP-------------GFPGTPGL 106
Query: 109 GGLGVSAGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK 166
G+ GA PQ PG G+ G PG +PG P PG+ + G P G+ +
Sbjct: 107 PGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG-FPGLQGPPGP-PGIPGMKGEP-GSIIM 163
Query: 167 PKAPGVGG--AFAGIPGV----GPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYG 219
PG G + G PG+ GP G P P P G P + P PG GLP G +
Sbjct: 164 SSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGP--PGPPGLPGPKGNMGLN 221
Query: 220 Y-GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVPGVPG 277
+ GP G G G G P GP + + +F G G+ G G PG+ G
Sbjct: 222 FQGPKGEKGEQGLQGPP-----GPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRG 276
Query: 278 AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA------- 329
GG G G K + G +PG PG PG G PG
Sbjct: 277 PPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG--IPGLPG-DPGYPGEPGRDGEKGQK 333
Query: 330 ------GVPGVGVPGAGIPVVPGA-------GIPGA----AVPGVVSPEAAAKAAAKAAK 372
G PG+ +P G + G G+PG PG+ P
Sbjct: 334 GDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLP-------- 385
Query: 373 YGARPGVGVGGIPTYGVGAGGFPGF----------GVGVGGIPGVAGVPGVGGVPGVGGV 422
PG V G P G GFPG G+ + G PG+ G PG G+PG G
Sbjct: 386 --GPPGAAVMGPP----GPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGP 439
Query: 423 PGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAP 482
G I P + G G+ GV G + G+ PG P
Sbjct: 440 AGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPG---QP 496
Query: 483 GVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG---------- 532
G+ PG PG + + K +A GL GIPG G PG
Sbjct: 497 GLPGLPG-PPGSLGFPGQKGEK--GQAGATGPKGL-PGIPGAPGAPGFPGSKGEPGDILT 552
Query: 533 ----------LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 582
LG G PGL G PG +PG L K G G G G G
Sbjct: 553 FPGMKGDKGELG-SPGAPGLPGLPGTPGQDGLPG-LPGPKGEPGGITFKGERGPPGNPGL 610
Query: 583 VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAA 642
G+PG + GP G VG G+ G+ G G PG+ G G P
Sbjct: 611 PGLPGNIGPMGPPGFGPP----------GPVGEKGIQGV-AGNPGQPGIPGPKGDPGQTI 659
Query: 643 AKAAKYGVAARPG 655
+ K G+ PG
Sbjct: 660 TQPGKPGLPGNPG 672
Score = 130 bits (327), Expect = 4e-30
Identities = 185/617 (29%), Positives = 227/617 (36%), Gaps = 132/617 (21%)
Query: 26 PGGVPGAIPGGVPGGVFYPAL----GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL 81
P G PG P G+PG P L G G+P P P G G+ GL PG
Sbjct: 903 PPGPPG--PLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGL--------PGP- 951
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAGAVVP----QPGAGVKPGKVPG 133
PG + K K GL G+PGV G G+ P QPG PG
Sbjct: 952 -PGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN 1010
Query: 134 VGLPGVYPG--------GVLPGARFPGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPG 181
GLPG PG G + FPG + G P +GV +P +PG+ G G PG
Sbjct: 1011 PGLPG-QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPG 1069
Query: 182 VGPFGGP-------QPGVPLGYP--------IKAPKLPGGYGLPYTTGK--------LPY 218
+ G P +PG+P GYP + P LPG G P G+ P
Sbjct: 1070 ISSIGLPGLPGPKGEPGLP-GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPG 1128
Query: 219 GYGPGGVAGAAGKAGYPTGTGV----------GPQAAAAAAAKAAAKFGAGAAGVLPGVG 268
GP G++G G G P G GP + AG G PG
Sbjct: 1129 PPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGE-PGQP 1187
Query: 269 GAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL--VPGGPGFGPGVVGV 326
G G PG PG +PG+ G G G GL +PG PG PG G
Sbjct: 1188 GFGNPGPPG-LPGLSGQKGDG---------------------GLPGIPGNPGL-PGPKGE 1224
Query: 327 PGA-GVPGV----GVPGAGIPVVPGA-------GIPGAAVP----GVVSPEAAAKAAAKA 370
PG G PGV G PG+ P + G G PG P G+ PE
Sbjct: 1225 PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNG 1284
Query: 371 AKYGARPGVGVGGIPTYG--VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 428
G + G G+P G G PG G G PG+ G+ G G+PGV G PG+
Sbjct: 1285 GIKGEKGNPGQPGLPGLPGLKGDQGPPGLQ-GNPGRPGLNGMKGDPGLPGVPGFPGMK-G 1342
Query: 429 PEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAP 488
P +A + GL+ G PG+ G + + G PG+ PG+ P
Sbjct: 1343 PSGVPGSAGPEGEPGLIGPPG-PPGLPGPSGQSI-----IIKGDAGPPGIPGQPGLKGLP 1396
Query: 489 GI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAG 547
G GP G+ GL G G G G PGL G GL G
Sbjct: 1397 GPQGPQGLPGPTGPPGDPGRN-------GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPG 1448
Query: 548 VPGFGAVPGALAAAKAA 564
G PG + A
Sbjct: 1449 PDGLQGPPGPPGTSSVA 1465
Score = 114 bits (285), Expect = 3e-25
Identities = 148/434 (34%), Positives = 170/434 (39%), Gaps = 54/434 (12%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPG-------GLAGAGLGAGLGAFPAV 75
P G PG P GVPG P L PG K K PG GL G GL +P
Sbjct: 1037 PQGVEGPPG--PSGVPGQPGSPGL-PGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGN 1093
Query: 76 TFPGALVPGGVADAAA----AYKAAKAGAGLGGVPGVGGLGVSAGAVVP--QPGAGVKPG 129
PG + G V D AK GL G PG G G P PG +PG
Sbjct: 1094 --PG--IKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPG 1149
Query: 130 KVPGVGLPGVYPGGVLPGARF-PGVGVLPGVPTGAGVKPKAPGVGGAFA-GIPGV-GPFG 186
V G G PG PG PG + PG +PG P G +P PG G G+PG+ G G
Sbjct: 1150 PVGGGGHPG-QPGP--PGEKGKPGQDGIPG-PAGQKGEPGQPGFGNPGPPGLPGLSGQKG 1205
Query: 187 -GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAA 245
G PG+P P LPG G P G P GP G G+ G A GPQ
Sbjct: 1206 DGGLPGIPGN-----PGLPGPKGEPGFHG-FPGVQGPPGPPGSPGPALEGPKGNPGPQGP 1259
Query: 246 AAAAAKAAAKFGAGAAGV--LPGVGGA----GVPGVPGAIPGIGGIAGVGTPAAAAAAAA 299
+ G G LPG GG G PG PG +PG+ G+ G P
Sbjct: 1260 PGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPG-LPGLPGLKGDQGPPGLQGNPG 1318
Query: 300 AAKAAKYGAAAGLVPGGPGFG--PGVVGVPGA----GVPG-VGVPGAGIPVVPGAGIPGA 352
GL PG PGF G GVPG+ G PG +G PG P +PG
Sbjct: 1319 RPGLNGMKGDPGL-PGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGP--PGLPGPSGQSI 1375
Query: 353 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGVAGV 410
+ G P G + G+ G P G G PGF G GG G G+
Sbjct: 1376 IIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD-GAGGRKGDPGL 1434
Query: 411 PGVGGVPGVGGVPG 424
PG G G+ G PG
Sbjct: 1435 PGQPGTRGLDGPPG 1448
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 160 bits (405), Expect = 4e-39
Identities = 217/706 (30%), Positives = 262/706 (37%), Gaps = 137/706 (19%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAG-------------LGA 67
P PG G PG +P GP G P P GL G +G
Sbjct: 428 PGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGT 487
Query: 68 GLGAFPAVT-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGV 126
G+ P PG P G K K AG G G+ G+ PGA
Sbjct: 488 GISGPPGQPGLPGLPGPPGSL-GFPGQKGEKGQAGATGPKGLPGI----------PGAPG 536
Query: 127 KPGKVPGVGLPG---VYPG-----GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAG 178
PG G PG +PG G L PG+ LPG P G+ P PG G G
Sbjct: 537 APGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGL-PGLPGPKGEPGG 595
Query: 179 IPGVGPFGGP-QPGVPLGYPIK-APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPT 236
I G G P PG+P G P P P G+G P G+ G GVAG G+ G P
Sbjct: 596 ITFKGERGPPGNPGLP-GLPGNIGPMGPPGFGPPGPVGEK----GIQGVAGNPGQPGIPG 650
Query: 237 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGG------IAGVGT 290
G P K G G + G G+PG PG +PGI G I G+G
Sbjct: 651 PKG-DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG-LPGIPGSKGEPGIPGIGL 708
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPG-VGVPGA-GIPVVPGA 347
P PG GF PG+ G PGA G PG +G+ G G P PG
Sbjct: 709 PGP--------------------PGPKGF-PGIPGPPGAPGTPGRIGLEGPPGPPGFPGP 747
Query: 348 -GIPGAAVPGVVSPEAAAKAAAKAAKYGAR--------PG-VGVGGIP--TYGVGAGGFP 395
G PG A+PG P G R PG G+ G+P VG G P
Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQP 807
Query: 396 GF-------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGV 448
G G+GV G PG G+PG G PG+ G+PG P PG+
Sbjct: 808 GPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGI 867
Query: 449 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAK 508
APG PG +PG+ G PG G+ PG PG + +S
Sbjct: 868 PGAPGPIGPPG---SPGLPGKAGASGFPGTKGEMGMMGPPG-PPGPLGIPGRS------- 916
Query: 509 AQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGA----LAAAKAA 564
G+PGL G+ G G G G PG PG L +K
Sbjct: 917 -----------GVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGE 965
Query: 565 KYGAAVPGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKA-AAKAAQFGLVGAAGL 618
K +PG+ G G G G+PG G+ G K Q GL+G GL
Sbjct: 966 KGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGL 1025
Query: 619 GGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G +G +G PG G+ G PP + GV +PG SP PG
Sbjct: 1026 KGT-IGDMGFPGPQGVEG-PPGPS------GVPGQPG---SPGLPG 1060
Score = 159 bits (403), Expect = 6e-39
Identities = 209/672 (31%), Positives = 258/672 (38%), Gaps = 99/672 (14%)
Query: 18 LSILHPSRPGGVPGAI--PG--GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFP 73
+ + P P G+PG I PG G+PG P GP G + PG G+ G
Sbjct: 818 IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDP--GPPGLDVPGPPGERGSPGIPGAPGPIG 875
Query: 74 AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAGAVVP----------QP 122
PG +PG A+ + K G+ G PG G LG+ + VP QP
Sbjct: 876 PPGSPG--LPGKAG--ASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQP 931
Query: 123 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG--AFAGIP 180
G G+ G PG+ PG PG P + G G+ P PGV G + G+P
Sbjct: 932 GLPGPTGEKGSKGEPGL-PGP--PGPMDPNLLGSKGEKGEPGL-PGIPGVSGPKGYQGLP 987
Query: 181 GVG--PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGT 238
G P QPG+P G P PK G GLP G + GP G+ G G G+P
Sbjct: 988 GDPGQPGLSGQPGLP-GPP--GPK--GNPGLPGQPGLI----GPPGLKGTIGDMGFPGPQ 1038
Query: 239 GV-GPQAAAAAAAKAAAKFGAGAAGVL--PGVGGAGVPGVPG--------AIPGIGGIAG 287
GV GP + + + G G PG+ G+PG+PG PG GI G
Sbjct: 1039 GVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKG 1098
Query: 288 -VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG-VGVPGAGI 341
VG P + PG PGF PG G PG +G PG G+PG
Sbjct: 1099 SVGDPGLPGLPGTPGAKGQ--------PGLPGF-PGTPGPPGPKGISGPPGNPGLPGEPG 1149
Query: 342 PVVPGAGIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIP-----TYGVGAG 392
PV G G PG P G + A + + G +PG G G P + G G
Sbjct: 1150 PV-GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG-QPGFGNPGPPGLPGLSGQKGDG 1207
Query: 393 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAP 452
G PG G G+PG G PG G PGV G PG P A + K PG P
Sbjct: 1208 GLPGIP-GNPGLPGPKGEPGFHGFPGVQGPPG----PPGSPGPALEGPKGN--PGPQGPP 1260
Query: 453 GVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAK 508
G PG PG+ G+ G PG+ PG+ GP G+ K
Sbjct: 1261 GRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMK 1320
Query: 509 AQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGA 568
G PGL G PG+ +GVPG G PG PG +
Sbjct: 1321 -----------GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSI 1369
Query: 569 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG-LGVGGL- 626
+ G G G G G+ G GP + GL G G GG G GL
Sbjct: 1370 IIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLP 1429
Query: 627 GVPGVGGLGGIP 638
G PG GL G P
Sbjct: 1430 GQPGTRGLDGPP 1441
Score = 133 bits (334), Expect = 6e-31
Identities = 185/611 (30%), Positives = 227/611 (37%), Gaps = 126/611 (20%)
Query: 26 PGGVPGAIPGGVPGGVFYPAL----GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL 81
P G PG P G+PG P L G G+P P P G G+ GL PG
Sbjct: 903 PPGPPG--PLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGL--------PGP- 951
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAGAVVP----QPGAGVKPGKVPG 133
PG + K K GL G+PGV G G+ P QPG PG
Sbjct: 952 -PGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN 1010
Query: 134 VGLPGVYPG--------GVLPGARFPGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPG 181
GLPG PG G + FPG + G P +GV +P +PG+ G G PG
Sbjct: 1011 PGLPG-QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPG 1069
Query: 182 VGPFGGP-------QPGVPLGYP--------IKAPKLPGGYGLPYTTGK--------LPY 218
+ G P +PG+P GYP + P LPG G P G+ P
Sbjct: 1070 ISSIGLPGLPGPKGEPGLP-GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPG 1128
Query: 219 GYGPGGVAGAAGKAGYPTGTGV----------GPQAAAAAAAKAAAKFGAGAAGVLPGVG 268
GP G++G G G P G GP + AG G PG
Sbjct: 1129 PPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGE-PGQP 1187
Query: 269 GAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL--VPGGPGFGPGVVGV 326
G G PG PG +PG+ G G G GL +PG PG PG G
Sbjct: 1188 GFGNPGPPG-LPGLSGQKGDG---------------------GLPGIPGNPGL-PGPKGE 1224
Query: 327 PGA-GVPGV----GVPGAGIPVVPGA-GIPGA----AVPGVVSPEAAAKAAAKAAKYGAR 376
PG G PGV G PG+ P + G G PG PG+ PE G +
Sbjct: 1225 PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEK 1284
Query: 377 PGVGVGGIPTYG--VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAA 434
G G+P G G PG G G PG+ G+ G G+PGV G PG+ P
Sbjct: 1285 GNPGQPGLPGLPGLKGDQGPPGLQ-GNPGRPGLNGMKGDPGLPGVPGFPGMK-GPSGVPG 1342
Query: 435 AAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPG 493
+A + GL+ G PG+ G + + G PG+ PG+ PG GP
Sbjct: 1343 SAGPEGEPGLIGPPG-PPGLPGPSGQSI-----IIKGDAGPPGIPGQPGLKGLPGPQGPQ 1396
Query: 494 GVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA 553
G+ GL G G G G PGL G GL G G
Sbjct: 1397 GLPGPTGPPGDPGRN-------GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQG 1448
Query: 554 VPGALAAAKAA 564
PG + A
Sbjct: 1449 PPGPPGTSSVA 1459
Score = 130 bits (327), Expect = 4e-30
Identities = 205/733 (27%), Positives = 258/733 (35%), Gaps = 141/733 (19%)
Query: 1 MAGLTAAAPRPGVLLLLLSIL-HPSRPGGVPGAIPG---------GVPGGVFYPAL-GPG 49
+ G++ AA G+ LL LS+ P+ G PG G G +P L G
Sbjct: 3 LRGVSLAA---GLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHP 59
Query: 50 GKPLKPVPGGLAGAGLGAGLGAFPAVTFP-GALVPGGVADAAAAYKAAKAGAGLGGVPGV 108
G P P P G G G P P G P G+ G G PG+
Sbjct: 60 GLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLP-------------GFPGTPGL 106
Query: 109 GGLGVSAGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK 166
G+ GA PQ PG G+ G PG +PG P PG+ + G P G+ +
Sbjct: 107 PGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG-FPGLQGPPGP-PGIPGMKGEP-GSIIM 163
Query: 167 PKAPGVGG--AFAGIPGV----GPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYG 219
PG G + G PG+ GP G P P P G P + P PG GLP G +
Sbjct: 164 SSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGP--PGPPGLPGPKGNMGLN 221
Query: 220 Y-GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVPGVPG 277
+ GP G G G G P GP + + +F G G+ G G PG+ G
Sbjct: 222 FQGPKGEKGEQGLQGPP-----GPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRG 276
Query: 278 AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA------- 329
GG G G K + G +PG PG PG G PG
Sbjct: 277 PPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG--IPGLPG-DPGYPGEPGRDGEKGQK 333
Query: 330 ------GVPGVGVPGAGIPVVPGA-------GIPGA----AVPGVVSPEAAAKAAAKAAK 372
G PG+ +P G + G G+PG PG+ P
Sbjct: 334 GDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLP-------- 385
Query: 373 YGARPGVGVGGIPTYGVGAGGFPGF----------GVGVGGIPGVAGVPGVGGVPGVGGV 422
PG V G P G GFPG G+ + G PG+ G PG G+PG G
Sbjct: 386 --GPPGAAVMGPP----GPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGP 439
Query: 423 PGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAP 482
G I P + G G+ GV G + G+ PG P
Sbjct: 440 AGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPG---QP 496
Query: 483 GVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG---------- 532
G+ PG PG + + K +A GL GIPG G PG
Sbjct: 497 GLPGLPG-PPGSLGFPGQKGEK--GQAGATGPKGL-PGIPGAPGAPGFPGSKGEPGDILT 552
Query: 533 ----------LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 582
LG G PGL G PG +PG L K G G G G G
Sbjct: 553 FPGMKGDKGELG-SPGAPGLPGLPGTPGQDGLPG-LPGPKGEPGGITFKGERGPPGNPGL 610
Query: 583 VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAA 642
G+PG + GP G VG G+ G+ G G PG+ G G P
Sbjct: 611 PGLPGNIGPMGPPGFGPP----------GPVGEKGIQGV-AGNPGQPGIPGPKGDPGQTI 659
Query: 643 AKAAKYGVAARPG 655
+ K G+ PG
Sbjct: 660 TQPGKPGLPGNPG 672
Score = 114 bits (284), Expect = 4e-25
Identities = 144/431 (33%), Positives = 167/431 (38%), Gaps = 54/431 (12%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPG-------GLAGAGLGAGLGAFPAV 75
P G PG P GVPG P L PG K K PG GL G GL +P
Sbjct: 1037 PQGVEGPPG--PSGVPGQPGSPGL-PGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGN 1093
Query: 76 TFPGALVPGGVADAAA----AYKAAKAGAGLGGVPGVGGLGVSAGAVVP--QPGAGVKPG 129
PG + G V D AK GL G PG G G P PG +PG
Sbjct: 1094 --PG--IKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPG 1149
Query: 130 KVPGVGLPGVYPGGVLPGARF-PGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGP 188
V G G PG PG PG + PG +PG P G +P PG G G PG+ G
Sbjct: 1150 PVGGGGHPG-QPGP--PGEKGKPGQDGIPG-PAGQKGEPGQPGFGNP--GPPGLPGLSGQ 1203
Query: 189 QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAA 248
+ L P +PG GLP G+ P +G GV G G G P GP+
Sbjct: 1204 KGDGGL------PGIPGNPGLPGPKGE-PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGP 1256
Query: 249 AAKAAAKFGAGAAGV--LPGVGGA----GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAK 302
G G LPG GG G PG PG +PG+ G+ G P
Sbjct: 1257 QGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPG-LPGLPGLKGDQGPPGLQGNPGRPG 1315
Query: 303 AAKYGAAAGLVPGGPGFG--PGVVGVPGA----GVPG-VGVPGAGIPVVPGAGIPGAAVP 355
GL PG PGF G GVPG+ G PG +G PG P +PG +
Sbjct: 1316 LNGMKGDPGL-PGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGP--PGLPGPSGQSIIIK 1372
Query: 356 GVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGVAGVPGV 413
G P G + G+ G P G G PGF G GG G G+PG
Sbjct: 1373 GDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD-GAGGRKGDPGLPGQ 1431
Query: 414 GGVPGVGGVPG 424
G G+ G PG
Sbjct: 1432 PGTRGLDGPPG 1442
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 160 bits (405), Expect = 4e-39
Identities = 217/706 (30%), Positives = 262/706 (37%), Gaps = 137/706 (19%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAG-------------LGA 67
P PG G PG +P GP G P P GL G +G
Sbjct: 428 PGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGT 487
Query: 68 GLGAFPAVT-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGV 126
G+ P PG P G K K AG G G+ G+ PGA
Sbjct: 488 GISGPPGQPGLPGLPGPPGSL-GFPGQKGEKGQAGATGPKGLPGI----------PGAPG 536
Query: 127 KPGKVPGVGLPG---VYPG-----GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAG 178
PG G PG +PG G L PG+ LPG P G+ P PG G G
Sbjct: 537 APGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGL-PGLPGPKGEPGG 595
Query: 179 IPGVGPFGGP-QPGVPLGYPIK-APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPT 236
I G G P PG+P G P P P G+G P G+ G GVAG G+ G P
Sbjct: 596 ITFKGERGPPGNPGLP-GLPGNIGPMGPPGFGPPGPVGEK----GIQGVAGNPGQPGIPG 650
Query: 237 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGG------IAGVGT 290
G P K G G + G G+PG PG +PGI G I G+G
Sbjct: 651 PKG-DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPG-LPGIPGSKGEPGIPGIGL 708
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPG-VGVPGA-GIPVVPGA 347
P PG GF PG+ G PGA G PG +G+ G G P PG
Sbjct: 709 PGP--------------------PGPKGF-PGIPGPPGAPGTPGRIGLEGPPGPPGFPGP 747
Query: 348 -GIPGAAVPGVVSPEAAAKAAAKAAKYGAR--------PG-VGVGGIP--TYGVGAGGFP 395
G PG A+PG P G R PG G+ G+P VG G P
Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQP 807
Query: 396 GF-------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGV 448
G G+GV G PG G+PG G PG+ G+PG P PG+
Sbjct: 808 GPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGI 867
Query: 449 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAK 508
APG PG +PG+ G PG G+ PG PG + +S
Sbjct: 868 PGAPGPIGPPG---SPGLPGKAGASGFPGTKGEMGMMGPPG-PPGPLGIPGRS------- 916
Query: 509 AQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGA----LAAAKAA 564
G+PGL G+ G G G G PG PG L +K
Sbjct: 917 -----------GVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGE 965
Query: 565 KYGAAVPGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKA-AAKAAQFGLVGAAGL 618
K +PG+ G G G G+PG G+ G K Q GL+G GL
Sbjct: 966 KGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGL 1025
Query: 619 GGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G +G +G PG G+ G PP + GV +PG SP PG
Sbjct: 1026 KGT-IGDMGFPGPQGVEG-PPGPS------GVPGQPG---SPGLPG 1060
Score = 158 bits (400), Expect = 1e-38
Identities = 209/673 (31%), Positives = 258/673 (38%), Gaps = 98/673 (14%)
Query: 18 LSILHPSRPGGVPGAI--PG--GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFP 73
+ + P P G+PG I PG G+PG P GP G + PG G+ G
Sbjct: 818 IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDP--GPPGLDVPGPPGERGSPGIPGAPGPIG 875
Query: 74 AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAGAVVP----------QP 122
PG +PG A+ + K G+ G PG G LG+ + VP QP
Sbjct: 876 PPGSPG--LPGKAG--ASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQP 931
Query: 123 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG--AFAGIP 180
G G+ G PG+ PG PG P + G G+ P PGV G + G+P
Sbjct: 932 GLPGPTGEKGSKGEPGL-PGP--PGPMDPNLLGSKGEKGEPGL-PGIPGVSGPKGYQGLP 987
Query: 181 GVG--PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGT 238
G P QPG+P G P PK G GLP G + GP G+ G G G+P
Sbjct: 988 GDPGQPGLSGQPGLP-GPP--GPK--GNPGLPGQPGLI----GPPGLKGTIGDMGFPGPQ 1038
Query: 239 GV-GPQAAAAAAAKAAAKFGAGAAGVL--PGVGGAGVPGVPG--------AIPGIGGIAG 287
GV GP + + + G G PG+ G+PG+PG PG GI G
Sbjct: 1039 GVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKG 1098
Query: 288 -VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG-VGVPGAGI 341
VG P + PG PGF PG G PG +G PG G+PG
Sbjct: 1099 SVGDPGLPGLPGTPGAKGQ--------PGLPGF-PGTPGPPGPKGISGPPGNPGLPGEPG 1149
Query: 342 PVVPGAGIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIP-----TYGVGAG 392
PV G G PG P G + A + + G +PG G G P + G G
Sbjct: 1150 PV-GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG-QPGFGNPGPPGLPGLSGQKGDG 1207
Query: 393 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVP-GVGVA 451
G PG G G+PG G PG G PGV G PG P A + K P G
Sbjct: 1208 GLPGIP-GNPGLPGPKGEPGFHGFPGVQGPPG----PPGSPGPALEGPKGNPGPQGPPGR 1262
Query: 452 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAA 507
PG PG PG+ G+ G PG+ PG+ GP G+
Sbjct: 1263 PGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGM 1322
Query: 508 KAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG 567
K G PGL G PG+ +GVPG G PG PG +
Sbjct: 1323 K-----------GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQS 1371
Query: 568 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG-LGVGGL 626
+ G G G G G+ G GP + GL G G GG G GL
Sbjct: 1372 IIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGL 1431
Query: 627 -GVPGVGGLGGIP 638
G PG GL G P
Sbjct: 1432 PGQPGTRGLDGPP 1444
Score = 131 bits (330), Expect = 2e-30
Identities = 185/614 (30%), Positives = 227/614 (36%), Gaps = 129/614 (21%)
Query: 26 PGGVPGAIPGGVPGGVFYPAL----GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL 81
P G PG P G+PG P L G G+P P P G G+ GL PG
Sbjct: 903 PPGPPG--PLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGL--------PGP- 951
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAGAVVP----QPGAGVKPGKVPG 133
PG + K K GL G+PGV G G+ P QPG PG
Sbjct: 952 -PGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN 1010
Query: 134 VGLPGVYPG--------GVLPGARFPGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPG 181
GLPG PG G + FPG + G P +GV +P +PG+ G G PG
Sbjct: 1011 PGLPG-QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPG 1069
Query: 182 VGPFGGP-------QPGVPLGYP--------IKAPKLPGGYGLPYTTGK--------LPY 218
+ G P +PG+P GYP + P LPG G P G+ P
Sbjct: 1070 ISSIGLPGLPGPKGEPGLP-GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPG 1128
Query: 219 GYGPGGVAGAAGKAGYPTGTGV----------GPQAAAAAAAKAAAKFGAGAAGVLPGVG 268
GP G++G G G P G GP + AG G PG
Sbjct: 1129 PPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGE-PGQP 1187
Query: 269 GAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL--VPGGPGFGPGVVGV 326
G G PG PG +PG+ G G G GL +PG PG PG G
Sbjct: 1188 GFGNPGPPG-LPGLSGQKGDG---------------------GLPGIPGNPGL-PGPKGE 1224
Query: 327 PGA-GVPGV----GVPGAGIPVVPGA-GIPGAAVP-------GVVSPEAAAKAAAKAAKY 373
PG G PGV G PG+ P + G G PG P G+ PE
Sbjct: 1225 PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIK 1284
Query: 374 GARPGVGVGGIPTYG--VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEA 431
G + G G+P G G PG G G PG+ G+ G G+PGV G PG+ P
Sbjct: 1285 GEKGNPGQPGLPGLPGLKGDQGPPGLQ-GNPGRPGLNGMKGDPGLPGVPGFPGMK-GPSG 1342
Query: 432 QAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI- 490
+A + GL+ G PG+ G + + G PG+ PG+ PG
Sbjct: 1343 VPGSAGPEGEPGLIGPPG-PPGLPGPSGQSI-----IIKGDAGPPGIPGQPGLKGLPGPQ 1396
Query: 491 GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPG 550
GP G+ GL G G G G PGL G GL G G
Sbjct: 1397 GPQGLPGPTGPPGDPGRN-------GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDG 1448
Query: 551 FGAVPGALAAAKAA 564
PG + A
Sbjct: 1449 LQGPPGPPGTSSVA 1462
Score = 130 bits (327), Expect = 4e-30
Identities = 205/733 (27%), Positives = 258/733 (35%), Gaps = 141/733 (19%)
Query: 1 MAGLTAAAPRPGVLLLLLSIL-HPSRPGGVPGAIPG---------GVPGGVFYPAL-GPG 49
+ G++ AA G+ LL LS+ P+ G PG G G +P L G
Sbjct: 3 LRGVSLAA---GLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHP 59
Query: 50 GKPLKPVPGGLAGAGLGAGLGAFPAVTFP-GALVPGGVADAAAAYKAAKAGAGLGGVPGV 108
G P P P G G G P P G P G+ G G PG+
Sbjct: 60 GLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLP-------------GFPGTPGL 106
Query: 109 GGLGVSAGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK 166
G+ GA PQ PG G+ G PG +PG P PG+ + G P G+ +
Sbjct: 107 PGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG-FPGLQGPPGP-PGIPGMKGEP-GSIIM 163
Query: 167 PKAPGVGG--AFAGIPGV----GPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYG 219
PG G + G PG+ GP G P P P G P + P PG GLP G +
Sbjct: 164 SSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGP--PGPPGLPGPKGNMGLN 221
Query: 220 Y-GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVPGVPG 277
+ GP G G G G P GP + + +F G G+ G G PG+ G
Sbjct: 222 FQGPKGEKGEQGLQGPP-----GPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRG 276
Query: 278 AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA------- 329
GG G G K + G +PG PG PG G PG
Sbjct: 277 PPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG--IPGLPG-DPGYPGEPGRDGEKGQK 333
Query: 330 ------GVPGVGVPGAGIPVVPGA-------GIPGA----AVPGVVSPEAAAKAAAKAAK 372
G PG+ +P G + G G+PG PG+ P
Sbjct: 334 GDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLP-------- 385
Query: 373 YGARPGVGVGGIPTYGVGAGGFPGF----------GVGVGGIPGVAGVPGVGGVPGVGGV 422
PG V G P G GFPG G+ + G PG+ G PG G+PG G
Sbjct: 386 --GPPGAAVMGPP----GPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGP 439
Query: 423 PGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAP 482
G I P + G G+ GV G + G+ PG P
Sbjct: 440 AGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPG---QP 496
Query: 483 GVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG---------- 532
G+ PG PG + + K +A GL GIPG G PG
Sbjct: 497 GLPGLPG-PPGSLGFPGQKGEK--GQAGATGPKGL-PGIPGAPGAPGFPGSKGEPGDILT 552
Query: 533 ----------LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 582
LG G PGL G PG +PG L K G G G G G
Sbjct: 553 FPGMKGDKGELG-SPGAPGLPGLPGTPGQDGLPG-LPGPKGEPGGITFKGERGPPGNPGL 610
Query: 583 VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAA 642
G+PG + GP G VG G+ G+ G G PG+ G G P
Sbjct: 611 PGLPGNIGPMGPPGFGPP----------GPVGEKGIQGV-AGNPGQPGIPGPKGDPGQTI 659
Query: 643 AKAAKYGVAARPG 655
+ K G+ PG
Sbjct: 660 TQPGKPGLPGNPG 672
Score = 114 bits (286), Expect = 2e-25
Identities = 148/432 (34%), Positives = 169/432 (39%), Gaps = 53/432 (12%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPG-------GLAGAGLGAGLGAFPAV 75
P G PG P GVPG P L PG K K PG GL G GL +P
Sbjct: 1037 PQGVEGPPG--PSGVPGQPGSPGL-PGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGN 1093
Query: 76 TFPGALVPGGVADAAA----AYKAAKAGAGLGGVPGVGGLGVSAGAVVP--QPGAGVKPG 129
PG + G V D AK GL G PG G G P PG +PG
Sbjct: 1094 --PG--IKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPG 1149
Query: 130 KVPGVGLPGVYPGGVLPGARF-PGVGVLPGVPTGAGVKPKAPGVGGAFA-GIPGV-GPFG 186
V G G PG PG PG + PG +PG P G +P PG G G+PG+ G G
Sbjct: 1150 PVGGGGHPG-QPGP--PGEKGKPGQDGIPG-PAGQKGEPGQPGFGNPGPPGLPGLSGQKG 1205
Query: 187 -GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAA 245
G PG+P P LPG G P G P GP G G+ G A GPQ
Sbjct: 1206 DGGLPGIPGN-----PGLPGPKGEPGFHG-FPGVQGPPGPPGSPGPALEGPKGNPGPQGP 1259
Query: 246 AAAAAKAAAKFGAGAAGVLPGVGGA----GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAA 301
G G LPG GG G PG PG +PG+ G+ G P
Sbjct: 1260 PGRPGFQGLPGPEGPPG-LPGNGGIKGEKGNPGQPG-LPGLPGLKGDQGPPGLQGNPGRP 1317
Query: 302 KAAKYGAAAGLVPGGPGFG--PGVVGVPGA----GVPG-VGVPGAGIPVVPGAGIPGAAV 354
GL PG PGF G GVPG+ G PG +G PG P +PG +
Sbjct: 1318 GLNGMKGDPGL-PGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGP--PGLPGPSGQSIII 1374
Query: 355 PGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGVAGVPG 412
G P G + G+ G P G G PGF G GG G G+PG
Sbjct: 1375 KGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD-GAGGRKGDPGLPG 1433
Query: 413 VGGVPGVGGVPG 424
G G+ G PG
Sbjct: 1434 QPGTRGLDGPPG 1445
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 160 bits (405), Expect = 4e-39
Identities = 221/710 (31%), Positives = 280/710 (39%), Gaps = 107/710 (15%)
Query: 18 LSILHPSRPGGVPGAI-PGGVPGGVFYPAL-----GPGGKPLKPVPGGLAGA-------- 63
LSI + G+PG + P G G PAL GP GK P P GL G
Sbjct: 391 LSIGDGDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPDGKRGPPGPPGLPGPPGPDGFLF 450
Query: 64 GL--GAGLGAFPAVT-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVP 120
GL G FP + PGA P G A + + + G+PG+ G AG +
Sbjct: 451 GLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAG-ING 509
Query: 121 QPGAGVKPGKVPGVGLPGV-----YPGGV-LPGAR----------FPGVGVLPGVPTGAG 164
+PG G GLPG PG + PG + G PGVP G
Sbjct: 510 EPGRKGDRGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPG 569
Query: 165 VKPK--APGVGG--AFAGIPGV------GPFGGP-QPGVPLGYPIKAPKLPGGYGLPYTT 213
+K +PG G F G+PG GP G P PG+P P G GLP
Sbjct: 570 MKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLK 629
Query: 214 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGA-G 271
G+ + G G+ G G G P G Q K A G + PG +GG G
Sbjct: 630 GQRGFP-GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVG-GDRQEAIQPGCIGGPKG 687
Query: 272 VPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGL-VPGGPGF-GP----GVV 324
+PG+PG PG G G+ G P A A G A PG PGF GP G V
Sbjct: 688 LPGLPGP-PGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAV 746
Query: 325 GVPGA-GVPG-VGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV 381
G+PG G PG +G+PG P PG G+PG + P A G G+
Sbjct: 747 GLPGPDGSPGPIGLPGPDGP--PGERGLPGEVLGAQPGPRGDA---------GVPGQPGL 795
Query: 382 GGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAK 441
G+P G G PGF G G+PG+ G+ G G+PG G PG+
Sbjct: 796 KGLP----GDRGPPGFR-GSQGMPGMPGLKGQPGLPGPSGQPGL---------------- 834
Query: 442 YGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAK 500
YG PG+ PG APG G+ PG PG PG APG +G G++
Sbjct: 835 YG-PPGLHGFPG---APGQEGPLGLPGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDRG 890
Query: 501 SAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA 560
A + + G G+ G PGL G PG+ G+PG PG +
Sbjct: 891 DAGFTGEQGHPGSP-----GFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGS 945
Query: 561 AKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAG- 617
A + +PG+ G G G G G G G P + G +G G
Sbjct: 946 KGEAGF-FGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGPMGLKGY 1004
Query: 618 LGGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
LG G+ G+ G+PG+ G+ G+P G PG P FPG A
Sbjct: 1005 LGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGFPGVA 1054
Score = 149 bits (376), Expect = 8e-36
Identities = 217/765 (28%), Positives = 278/765 (36%), Gaps = 170/765 (22%)
Query: 28 GVPGAIPGGVPGGVFYPALGPGGKPLKP----------VPGGLAGAGLGA--GLGAFPAV 75
G PG P G+P +P + P G P G+ G L G+ FP +
Sbjct: 246 GQPG--PNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGL 303
Query: 76 T-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKPGKVP 132
+PG G + K ++ G G G G AG P P P
Sbjct: 304 RGYPGLSGEKG----SPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAK 359
Query: 133 GV-GLPGVYPGGV-LPGAR----FPGVGVLPGVPTGAGVKPKA-PGVGG--AFAGIPGVG 183
G G PG +PG PG++ PG+ PG+ G G + + PG G F G PG+
Sbjct: 360 GARGDPG-FPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIP 418
Query: 184 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GP 242
G PG P PG GLP G + +G G G AG G P G GP
Sbjct: 419 ALYGGPPG-----PDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGP 473
Query: 243 QAAAAAAAKAAAKFGAGAAGVLPGVGG----AGVPGVPG--------------AIPGIGG 284
+ A + G A LPG+ G AG+ G PG PG+ G
Sbjct: 474 KGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKGDRGDPGQHGLPGFPGLKG 533
Query: 285 IAG-VGTPAAAAAAAAAAKAAKYGAAA--------------------GL-----VPGGPG 318
+ G +G P A + G GL +PG PG
Sbjct: 534 VPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPG 593
Query: 319 FG-------PGVVGVPGA-------GVPGVGVPG----------AGIPVVPG-AGIPG-A 352
G PG G+PG G PG+G+PG AG+P PG G PG A
Sbjct: 594 DGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPA 653
Query: 353 AVPGVVSPEAAAKAAAKAAKYGA-RPGV-----GVGGI-----PTYGVGAGGFPGFGVGV 401
PG + + K A + A +PG G+ G+ PT G G PGF G
Sbjct: 654 GTPGQIDCDTDVKRAVGGDRQEAIQPGCIGGPKGLPGLPGPPGPTGAKGLRGIPGF-AGA 712
Query: 402 GGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVG 461
G PG G+PG G G G PG I P A G +G+ PG PG
Sbjct: 713 DGGPGPRGLPGDAGREGFPGPPGF-IGPRGSKGAVGLPGPDGSPGPIGL-PGPDGPPGER 770
Query: 462 VAPG--VGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG 518
PG +G PG GV PG+ PG GP G R + G+
Sbjct: 771 GLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPG----------------FRGSQGM- 813
Query: 519 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLG 578
G+PGL G PGL +G PGL G+ GF PG + +PG+ G G
Sbjct: 814 PGMPGL---KGQPGLPGPSGQPGLYGPPGLHGFPGAPG-------QEGPLGLPGIPGREG 863
Query: 579 ALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL----------G 627
G G PG GP + A G G G G G+ G+ G
Sbjct: 864 LPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRG 923
Query: 628 VPGVGGLGGIP--------PAAAAKAAKYGVAARPGFGLSPIFPG 664
PG+ G G+P P + +A +G+ G P F G
Sbjct: 924 SPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKG 968
Score = 142 bits (359), Expect = 8e-34
Identities = 196/634 (30%), Positives = 247/634 (38%), Gaps = 87/634 (13%)
Query: 48 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL-------VPGGVADAAAAYKAAKAG- 99
PG LK VPG + G G +T G VPG D + + G
Sbjct: 526 PGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGF 585
Query: 100 AGLGGVPGVGGLGVSAGAVVPQ-PGAGVKPGKV--PGVGLPGVYPGGVLPGAR-FPGVGV 155
GL G PG G G P PG PG++ PG+GLPG L G R FPG
Sbjct: 586 PGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPG------LKGQRGFPGDAG 639
Query: 156 LPGVPTGAGVKPKA--PG-----------VGGAFAGIPGVGPFGGPQ--PGVPLGYPIKA 200
LPG P G A PG VGG G GGP+ PG+P P
Sbjct: 640 LPGPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIGGPKGLPGLP--GPPGP 697
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAG 259
G G+P G G GP G+ G AG+ G+P G +GP+ + A G
Sbjct: 698 TGAKGLRGIPGFAGA-DGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPG 756
Query: 260 AAGVLPGVGGA----GVPG-VPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLV 313
G LPG G G+PG V GA PG G AGV G P G+ +
Sbjct: 757 PIG-LPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQG--M 813
Query: 314 PGGPGFGPGVVGVPG-AGVPGV-GVPGA-GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKA 370
PG PG G G+PG +G PG+ G PG G P PG P +PG+ E
Sbjct: 814 PGMPGL-KGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGP-LGLPGIPGREGLPGDRGDP 871
Query: 371 AKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPE 430
GA VG+ G+ G G GF G G PG G G+ G+PG G+ G SP
Sbjct: 872 GDTGAPGPVGMKGLS----GDRGDAGF-TGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPG 926
Query: 431 AQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI 490
+PG+ PG + G G+ G+ PG + G PG
Sbjct: 927 MDGFQG--------MPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGP 978
Query: 491 GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPG 550
P + ++ G G GL +G G+ G+PGL +G+PG
Sbjct: 979 PP----------VILPGMKDIKGEKG-DEGPMGLKGYLGAKGIQGMPGIPGL---SGIPG 1024
Query: 551 FGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 610
PG + K K VPG+ G G G G PG G + A +A +
Sbjct: 1025 LPGRPGHI---KGVKGDIGVPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLY 1081
Query: 611 GLVGAAG-LGGLG-----VGGLGVPGVGGLGGIP 638
G +GA G G +G G G+ G G GIP
Sbjct: 1082 GEIGATGDFGDIGDTINLPGRPGLKGERGTTGIP 1115
Score = 132 bits (333), Expect = 8e-31
Identities = 217/770 (28%), Positives = 272/770 (35%), Gaps = 169/770 (21%)
Query: 28 GVPGAIPGGVPGGVFYPALGPGGKP-LKPVPGGLAGAGLG----AGLGAFPAVT-FPGAL 81
G+PG P G PG + P GP G P + +PG + GA G AG+ P + PG
Sbjct: 747 GLPG--PDGSPGPIGLP--GPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDR 802
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ-----PGAGVKPGKVPGVGL 136
P G + + GL G PG+ G G P PGA PG+ +GL
Sbjct: 803 GPPGFRGS----QGMPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGA---PGQEGPLGL 855
Query: 137 PGVYPGGVLPGARF-PGVGVLPGVP--------------TGAGVKPKAPGVGGAFAGIPG 181
PG+ LPG R PG PG TG P +PG G G+PG
Sbjct: 856 PGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKG-IDGMPG 914
Query: 182 VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-- 239
G + + P L G G P + G+ + +G G+ G AG+ G+ G
Sbjct: 915 TPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSKGEAGF-FGIPGLKGLAGEPGFKGSRGDP 973
Query: 240 --VGPQAAAAAAAK-----------AAAKFGAGAAGV--LPGVGG-AGVPGVPG------ 277
GP K K GA G+ +PG+ G +G+PG+PG
Sbjct: 974 GPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIK 1033
Query: 278 ---------AIPGIGGIAGVGTPAAAAA----------AAAAAKAAKYGAAAGL------ 312
IPG+ G GV P A +A YG
Sbjct: 1034 GVKGDIGVPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDI 1093
Query: 313 -----VPGGPGFGP--GVVGVPGA-------GVPG-VGVPG-AGIPVVPGA-GIPG-AAV 354
+PG PG G G+PG G G +G PG G+ V G G+ G
Sbjct: 1094 GDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGF 1153
Query: 355 PGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF-GV-GVGGIPGVAGVPG 412
PG+ P + + G + G G P G GFPG G+ G+ G+PG G PG
Sbjct: 1154 PGLTGPPGSQGELGRIGLPGGKGDDGWPGAP----GLPGFPGLRGIRGLHGLPGTKGFPG 1209
Query: 413 -----VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 467
+ G PG G PG P G G APG PG +PG+
Sbjct: 1210 SPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQG-APGERGPPG---SPGLQ 1265
Query: 468 LAPGVGVAPGVGVAPGVGVAPGI----------GPGGVAAAAKSAAKVAAKAQLRAAAGL 517
PG+ + APG APGI GP G AA S
Sbjct: 1266 GFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGTPGTK 1325
Query: 518 G-------------AGIPGLGVGVGVPGLGVGAGVPGLGVG-------AGVPGFGAVPGA 557
G G+PG G G G G VG G PGF PG
Sbjct: 1326 GWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTG-AVGDRGPKGPKGDPGFPGAPGT 1384
Query: 558 LAAAKAAKYG---AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVG 614
+ A A A PG +G G G G PG + GP A KA G
Sbjct: 1385 VGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKA------G 1438
Query: 615 AAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G GG+ VPG G G P + G RPG SP PG
Sbjct: 1439 PQGRGGVS----AVPGFRGDEG-PIGHQGPIGQEGAPGRPG---SPGLPG 1480
Score = 118 bits (296), Expect = 2e-26
Identities = 211/720 (29%), Positives = 260/720 (36%), Gaps = 133/720 (18%)
Query: 43 YPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGL 102
YP G G+P P G G GL FP + + K G
Sbjct: 54 YPEKGGRGQPGPVGPQGYNGP---PGLQGFPGL------------------QGRKGDKGE 92
Query: 103 GGVPGVGGLGVSAGA--VVPQPGAGVKPGKVPGVGLPGVYPG--------GVLPGARFPG 152
G PGV G GA V PGA PG PG G P PG G PG
Sbjct: 93 RGAPGVTGPKGDVGARGVSGFPGADGIPGH-PGQGGPRGRPGYDGCNGTQGDSGPQGPPG 151
Query: 153 VGVLPGVPTGAGVKPKAPGVGGAFA-------------GIPGVGPFGGPQPGVPLGY--- 196
G P G K + G +A G PG+ F GP PG P G+
Sbjct: 152 SEGFTGPPGPQGPKGQK---GEPYALPKEERDRYRGEPGEPGLVGFQGP-PGRP-GHVGQ 206
Query: 197 --PIKAPKLPGGYGLPYTTGKLPY-GYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA 253
P+ AP PG G P G+ G G GV G G G P G+ A
Sbjct: 207 MGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKGEKGDVGQPGPNGIPSDTLHPIIAPTG 266
Query: 254 AKF------GAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV----GTPAAAAAAAA-- 299
F G + PG+ G + G G + PG+ G G+ G+P +
Sbjct: 267 VTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDG 326
Query: 300 -----AAKAAKYGAAAGLVPGGPGFGP---------GVVGVPGA-GVPGV-GVPG-AGIP 342
+ K A PG P + P G G PGA G PG G PG G+P
Sbjct: 327 YQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARGDPGFPGAQGEPGSQGEPGDPGLP 386
Query: 343 VVPGAGIPGA----AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG 398
PG I +PG + P+ A YG PG P G G PG
Sbjct: 387 GPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPDGKRGPPGPPGLPGPPGPD 446
Query: 399 VGVGGIPGVAGVPGVGGVPGVGGVPG----VGISPEAQAAAAAKAAKYGLVPGVGVAPGV 454
+ G+ G G G G+PG G G G + E + +A K GL PG+ PG
Sbjct: 447 GFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGDEAIK-GL-PGL---PGP 501
Query: 455 GVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRA 513
G+ PG G G+ PG+ PG IG G A + + K + R
Sbjct: 502 KGFAGINGEPGRKGDRGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGE-RG 560
Query: 514 AAGLGAGIPGLGVGVGVPGLGVGAGVPGL----GVG----AGVPGFGAVPGALAA-AKAA 564
G+ G+PG+ G PG G PGL G G G PG+ +PG +
Sbjct: 561 QPGV-PGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMG 619
Query: 565 KYGAAVPGVLGGLGALGGVGIPG--GVVG-AGPAAA-----------AAAAKAAAKAAQF 610
G +PG+ G G G G+PG G +G GPA A +A Q
Sbjct: 620 PPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQP 679
Query: 611 GLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAK-----YGVAARPGFGLSPIFPG 664
G +G GL GL G G G GL GIP A A G A R GF P F G
Sbjct: 680 GCIGGPKGLPGL-PGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIG 738
Score = 98.2 bits (243), Expect = 2e-20
Identities = 142/479 (29%), Positives = 174/479 (36%), Gaps = 90/479 (18%)
Query: 23 PSRPGGVPGA-----IPGGVPGGVFYPALG--PGGKPLKPVPGGLAGAGLGAGLGAFPAV 75
P RPG + G +PG +PG +P + PG G G G + +
Sbjct: 1026 PGRPGHIKGVKGDIGVPG-IPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEI 1084
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAV--VPQPG----AGVK-- 127
G G K G G+PG+ G G + PG GV+
Sbjct: 1085 GATGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGP 1144
Query: 128 PGKVPGVGLPGVY--PGGV-------LPGAR----FPGVGVLPGVPTGAGVKPK--APGV 172
PG G PG+ PG LPG + +PG LPG P G++ PG
Sbjct: 1145 PGLKGQTGFPGLTGPPGSQGELGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHGLPGT 1204
Query: 173 GGAFAGIPGVGPFGGPQ-PGVP--LGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGG--- 224
G F G PG G P PG P G P +A LPG G+P G P GP G
Sbjct: 1205 KG-FPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPGSPG 1263
Query: 225 ------------VAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGV--LPG 266
++GA G G P G+ GP +AA +K G G PG
Sbjct: 1264 LQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGTPG 1323
Query: 267 VGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 326
G P PG+ G+ G P GA P GP PG G
Sbjct: 1324 TKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMG--NTGPTGAVGDRGPKGPKGDPGFPGA 1381
Query: 327 PGAGVPGVGVPG-AGIP----VVPGA-------GIPGAAVPGVVSPEAAAKAAAKAAKYG 374
PG VG PG AGIP V PG G PGA PG + P+ + G
Sbjct: 1382 PGT----VGAPGIAGIPQKIAVQPGTVGPQGRRGPPGA--PGEMGPQGPP------GEPG 1429
Query: 375 ARPGVGVGGIPTYGVGAGGFPGFG-----VGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 428
R G G G G PGF +G G G G PG G PG+ G+PG +S
Sbjct: 1430 FRGAPGKAGPQGRG-GVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPGRSVS 1487
Score = 58.2 bits (139), Expect = 3e-08
Identities = 93/301 (30%), Positives = 108/301 (35%), Gaps = 73/301 (24%)
Query: 23 PSRPG--GVPG---AIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTF 77
P PG G PG +PG P GV PG K + PG G GL FP +T
Sbjct: 1222 PGPPGERGDPGEANTLPG--PVGV------PGQKGDQGAPGERGPPG-SPGLQGFPGIT- 1271
Query: 78 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 137
P + + G D G PG+ GL G P PG+ PG G P
Sbjct: 1272 PPSNISGAPGDK--------------GAPGIFGLKGYRGPPGP-PGSAALPGSKGDTGNP 1316
Query: 138 GV--------YPGGVLPGARFPGVGVLPGV--------------PTGA--GVKPKAPGVG 173
G + G P R PGV LPG PTGA PK P
Sbjct: 1317 GAPGTPGTKGWAGDSGPQGR-PGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPKGD 1375
Query: 174 GAFAGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKA 232
F G PG VG PG+ G P K PG G G P G G G G+
Sbjct: 1376 PGFPGAPGTVGA-----PGIA-GIPQKIAVQPGTVGPQGRRGP-PGAPGEMGPQGPPGEP 1428
Query: 233 GYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGV--------LPG-VGGAGVPGVPGAIPGI 282
G+ G GPQ +A + G G PG G G+PG+PG I
Sbjct: 1429 GFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPGRSVSI 1488
Query: 283 G 283
G
Sbjct: 1489 G 1489
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 157 bits (398), Expect = 2e-38
Identities = 244/775 (31%), Positives = 275/775 (35%), Gaps = 200/775 (25%)
Query: 36 GVPGGVFYPALGPGGKPLKPVPGGLAG-------------AGLGAGLGAFPAVTFP-GAL 81
G PG P GP G P P P GL G AG GA LG P G
Sbjct: 153 GEPGTPGNP--GPPGPPGPPGPPGLGGNFAAQMAGGFDEKAG-GAQLGVMQGPMGPMGPR 209
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVY- 140
P G A A + + G G PGV G G PG KPG G PG
Sbjct: 210 GPPGPAGAPGP-QGFQGNPGEPGEPGVSGPMGPRG----PPGPPGKPGDDGEAGKPGKAG 264
Query: 141 ---PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGA--FAGIPGV-------GPFGGP 188
P G FPG LPGV G PG+ GA AG PGV G G P
Sbjct: 265 ERGPPGPQGARGFPGTPGLPGVKGHRGY----PGLDGAKGEAGAPGVKGESGSPGENGSP 320
Query: 189 QPGVPLGYPIKAPKL--------------PGGYGLPYTTGKLPYGYGPG--GVAGAAGKA 232
P P G P + + PG G P G P G GPG G GA G+A
Sbjct: 321 GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG--PAG-GPGFPGAPGAKGEA 377
Query: 233 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGV--------LPGV-GGAGVPGVPGA----- 278
G PTG GP+ A + G AG +PG G AG PG+ GA
Sbjct: 378 G-PTGAR-GPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPG 435
Query: 279 ---------------------IPGIGGIAG----------VGTPAAAAAAAAAAKAAKYG 307
PGI G G G A A K G
Sbjct: 436 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARG 495
Query: 308 AAAGLVPGGPGFGPGVVGVPG-AGVPG-------VGVPGA-------------GIPVVPG 346
G+ P GP PG G PG G PG G PG G P PG
Sbjct: 496 EPGGVGPIGP---PGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPG 552
Query: 347 -AGIPGA----AVPGVVSPEAAAKAAAKAAKYGARPG----VGVGGIPTYGVGAGGFPGF 397
G+PGA PG P+ + + G RPG G G P G GFPG
Sbjct: 553 EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDG-RPGPPGPQGARGQP----GVMGFPG- 606
Query: 398 GVGVGGIPGVAGVPGVGGVPGVGGVPGV-----GISPEAQAAAAAKAAKYGLVPGVGVAP 452
G G PG AG G+ G PG+ G+PG P A A + + G AP
Sbjct: 607 PKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQG-------AP 659
Query: 453 GVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQL 511
G G+ PG PG G PG PG APG +GP G A+ L
Sbjct: 660 GPSGFQGLPGPPG---PPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQG-L 715
Query: 512 RAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA------- 564
+ GL G PG G G AG PG G PG +PG AA A
Sbjct: 716 QGPRGL-PGTPGTD---GPKGASGPAGPPG---AQGPPGLQGMPGERGAAGIAGPKGDRG 768
Query: 565 ----KYGAAVPGVLGGLGALGGVGIPG--------GVVG-AGPAAAAAAAKAAAKAAQFG 611
K PG GG G G +G PG G VG GPA +A A A + + G
Sbjct: 769 DVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETG 828
Query: 612 LVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G AG G G G PG G G +A + G A PG P P GA
Sbjct: 829 PPGPAGFAG-PPGADGQPGAKGEQG-------EAGQKGDAGAPG----PQGPSGA 871
Score = 155 bits (392), Expect = 1e-37
Identities = 213/679 (31%), Positives = 243/679 (35%), Gaps = 93/679 (13%)
Query: 28 GVPGAIPGGVPGGVFYP--ALGPGGKPLKPVPGGLAGAGLGAGLGAFP------------ 73
G PGA P G P A GP G+P P G AGA G P
Sbjct: 369 GAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIA 428
Query: 74 -AVTFPGALVPGGVADAAAAY--KAAKAGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKP 128
A FPG P G A K G+ G G G G PQ PG +
Sbjct: 429 GAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEE 488
Query: 129 GKVPGVGLP-GVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFG 186
GK G P GV P G PG R PG PG AG K APG G +G+ G
Sbjct: 489 GKRGARGEPGGVGPIGP-PGERGAPGNRGFPGQDGLAGPK-GAPGERGP-SGLAGPKGAN 545
Query: 187 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKL-PYG-YGPGGVAGAAGKAGYPTGTGVGPQA 244
G PG P P LPG GL G P G GP G G G+ G P GPQ
Sbjct: 546 G-DPGRP-----GEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPP-----GPQG 594
Query: 245 AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVGTPAAAAAAAAAAK 302
A GA G G G+PG PG +PG G G P A A +
Sbjct: 595 ARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGP--PGPAGPAGE 652
Query: 303 AAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPG-AAVPGVVS 359
+ GA PG GF PG G PG G G PG G+PG A PG+V
Sbjct: 653 RGEQGA-----PGPSGFQGLPGPPGPPGEG----GKPG-------DQGVPGEAGAPGLVG 696
Query: 360 PEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGV 419
P + GA+ G G+P G P G G PG G PG+ G+PG
Sbjct: 697 PRGERGFPGERGSPGAQGLQGPRGLP--GTPGTDGPKGASGPAGPPGAQGPPGLQGMPGE 754
Query: 420 GGVPGVG--------ISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPG 471
G G+ + + A K GL +G PG A G G PG
Sbjct: 755 RGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG-PPGPAGANGEKGEVG---PPG 810
Query: 472 VGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVG 529
+ G APG G GP G A + + AK + A G AG PG G
Sbjct: 811 PAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSG 870
Query: 530 VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGV 589
PG GV G G G PGA PG G +G G G PG
Sbjct: 871 APGPQGPTGVTG---PKGARGAQGPPGA----------TGFPGAAGRVGPPGSNGNPGPP 917
Query: 590 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG--VGGLGVPGVGGLGGI--PPAAAAKA 645
GP+ A + G G GL G G G PG G G PP A
Sbjct: 918 GPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLA 977
Query: 646 AKYGVAARPGFGLSPIFPG 664
+ G+ PG FPG
Sbjct: 978 GQRGIVGLPGQRGERGFPG 996
Score = 145 bits (367), Expect = 9e-35
Identities = 223/677 (32%), Positives = 251/677 (37%), Gaps = 108/677 (15%)
Query: 26 PGGV-PGAIPG--GVPGGVFYPA----LGPGGKPLKPVPGGLAGA-GLGAGLGAFPAVTF 77
PGGV P PG G PG +P GP G P + P GLAG G G
Sbjct: 497 PGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGL 556
Query: 78 PGAL-VPGGVADAAAAYKAAKAGA-GLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVG 135
PGA + G DA K +GA G G PG G + G QPG PG G
Sbjct: 557 PGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARG----QPGVMGFPGPKGANG 612
Query: 136 LPGVYPGGVLPGARFPGVGVLPGVP--TGAGVKPKAPGVGGAFA--GIPGVGPFGGPQPG 191
PG LPGA PG+ LPG TGA P G G G PG F G PG
Sbjct: 613 EPGKAGEKGLPGA--PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQG-LPG 669
Query: 192 VPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAA 250
P G P + K PG G+P G P GP G G G+ G P G+ GP+
Sbjct: 670 PP-GPPGEGGK-PGDQGVPGEAGA-PGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPG 726
Query: 251 KAAAKFGAGAAGVLPGVGGA----GVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAK 305
K +G AG PG G G+PG GA GI G G G A K
Sbjct: 727 TDGPKGASGPAGP-PGAQGPPGLQGMPGERGA-AGIAGPKGDRGDVGEKGPEGAPGKDGG 784
Query: 306 YGAAAGLVPGGPGFG---------PGVVGVPGA-GVPG----VGVPG-AGIPVVPGA-GI 349
G + P GP PG G GA G PG G PG AG PGA G
Sbjct: 785 RGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQ 844
Query: 350 PG-------------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 396
PG A PG P A G + G G P GA GFPG
Sbjct: 845 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP----GATGFPG 900
Query: 397 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL-----VPGVGVA 451
G G PG G PG G PG G G + +A + GL PG
Sbjct: 901 -AAGRVGPPGSNGNPGPPGPPGPSGKDGPK-GARGDSGPPGRAGEPGLQGPAGPPGEKGE 958
Query: 452 PGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 510
PG G PG GLA G+ G+ G PG+ PG K A A+ +
Sbjct: 959 PGDDGPSGAEGPPGPQGLAGQRGIV-GLPGQRGERGFPGL-PGPSGEPGKQGAPGASGDR 1016
Query: 511 LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 570
G PG VG PGL AG PG G PG PG A A V
Sbjct: 1017 ---------GPPG---PVGPPGLTGPAGEPG---REGSPGADGPPGRDGA-------AGV 1054
Query: 571 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG-LGGLGV------ 623
G G GA+G G PG GPA +A G +G +G G G+
Sbjct: 1055 KGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1114
Query: 624 ----GGLGVPGVGGLGG 636
G G PG GL G
Sbjct: 1115 RGDKGEAGEPGERGLKG 1131
Score = 142 bits (357), Expect = 1e-33
Identities = 221/705 (31%), Positives = 256/705 (36%), Gaps = 120/705 (17%)
Query: 23 PSRPG--GVPGAI-----PGGV-PGGVFYPALGPG--GKPLKPVPGGLAGAGLGAGLGAF 72
P RPG G+PGA PG P G P+ PG G+P P P G G G+ F
Sbjct: 548 PGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQ---PGVMGF 604
Query: 73 PAVT-------------FPGAL----VPGGVADAAAAYKAAKAGA----GLGGVPGVGGL 111
P PGA +PG + AA AG G G PG G
Sbjct: 605 PGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGF 664
Query: 112 GVSAGAVVPQPGAGVKPGK--VPG-VGLPGV--------YPGGV-LPGAR-FPGVGVLPG 158
G P PG G KPG VPG G PG+ +PG PGA+ G LPG
Sbjct: 665 QGLPGPPGP-PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPG 723
Query: 159 VPTGAGVKPKA-----PGVGG--AFAGIPG-------VGPFGGPQPGVPLGYPIKAPKLP 204
P G K + PG G G+PG GP G + V P AP
Sbjct: 724 TPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP-KGDRGDVGEKGPEGAPGKD 782
Query: 205 GGYGLPYTTGKL-PYG-------YGPGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAK 255
GG GL G P G GP G AG+AG G P G GP A A A
Sbjct: 783 GGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGAD 842
Query: 256 FGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAA 310
GA G G G G PG PG G GV P A A A + AA
Sbjct: 843 GQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA 902
Query: 311 GLV-PGGPGFGPGVVGVPGA----GVPGV----GVPG-AGIPVVPG-AGIPGA-AVPGVV 358
G V P G PG G PG G G G PG AG P + G AG PG PG
Sbjct: 903 GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDD 962
Query: 359 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG 418
P A G R G+ G+P G GFPG +PG +G PG G PG
Sbjct: 963 GPSGAEGPPGPQGLAGQR---GIVGLPGQR-GERGFPG-------LPGPSGEPGKQGAPG 1011
Query: 419 VGGVPGVG--ISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAP 476
G G + P A + + G +PG PG A GV G A
Sbjct: 1012 ASGDRGPPGPVGPPGLTGPAGEPGREG-------SPGADGPPGRDGAAGVKGDRGETGAV 1064
Query: 477 GVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGV 535
G APG +PG P G + A+ + + GA GI G G G
Sbjct: 1065 GAPGAPGPPGSPG--PAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG 1122
Query: 536 GAGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGA-AVPGVLGGLGALGGVGIPG 587
G GL G G +PG A+ A G PG +G G G GIPG
Sbjct: 1123 EPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPG 1182
Query: 588 GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
+ GP + A G G G G G+ G+G
Sbjct: 1183 PIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLG 1227
Score = 128 bits (321), Expect = 2e-29
Identities = 185/577 (32%), Positives = 207/577 (35%), Gaps = 58/577 (10%)
Query: 94 KAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGV 153
K A G G PG G PG PG GL G + + G
Sbjct: 143 KGAPGPRGRDGEPGTPG----------NPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAG 192
Query: 154 GVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGP-----QPGV--PLGYPIKAPKLPGG 206
G GV G + P P AG PG F G +PGV P+G P P PG
Sbjct: 193 GAQLGVMQGP-MGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG-PRGPPGPPGK 250
Query: 207 YGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLP 265
G GK P G G G G G+P G+ G + AK AGA GV
Sbjct: 251 PGDDGEAGK-PGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG 309
Query: 266 GVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVV 324
G G G PG + G G+ G G A AA A + G A P GP GPG
Sbjct: 310 ESGSPGENGSPGPM-GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFP 368
Query: 325 GVPG----AGVPGV-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV 379
G PG AG G G GA P G PG PG P A+ GA+
Sbjct: 369 GAPGAKGEAGPTGARGPEGAQGP----RGEPG--TPGSPGPAGASGNPGTDGIPGAKGSA 422
Query: 380 GVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAA 437
G GI GA GFPG G G G G G G PG+ G G P+ + A
Sbjct: 423 GAPGI----AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQ-GPKGEPGPAG 477
Query: 438 KAAKYGLVPGVGVAPGVGVAPGVGV--APGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGG 494
G G G GVG PG APG PG G APG GP G
Sbjct: 478 PQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSG 537
Query: 495 VAA--AAKSAAKVAAKAQLRAAAGL-----GAGIPGLGVGVGVPGLGVGAGVPGLGVGAG 547
+A A + L A GL AG G G PG G PG G
Sbjct: 538 LAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARG 597
Query: 548 VPGFGAVPGALAA----AKAAKYG-AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAK 602
PG PG A KA + G PG+ G G G G G AGPA
Sbjct: 598 QPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQG 657
Query: 603 AAAKAAQFGLVGAAGLGGLG--VGGLGVPGVGGLGGI 637
A + GL G G G G G GVPG G G+
Sbjct: 658 APGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGL 694
Score = 122 bits (306), Expect = 1e-27
Identities = 159/504 (31%), Positives = 180/504 (35%), Gaps = 49/504 (9%)
Query: 200 APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGY------PTGTGVGPQAAAAAAAKAA 253
+P++P G P L G G G G+ G P G GPQ A
Sbjct: 77 SPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKGPP-GPQGPAGEQGPRG 135
Query: 254 AKFGAGAAGVLPGVGGA----GVPGVPG--AIPGIGGIAGVGTPAAAAAAAA---AAKAA 304
+ G G PG G G PG PG PG G G+G AA A A A
Sbjct: 136 DRGDKGEKGA-PGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGA 194
Query: 305 KYGAAAG-LVPGGPGFGPGVVGVPG----AGVPG-VGVPGAGIPVVPGAGIPGAAVPGVV 358
+ G G + P GP PG G PG G PG G PG P+ P G PG PG
Sbjct: 195 QLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGP-RGPPGP--PGKP 251
Query: 359 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG 418
+ A KA + G G G P G G PG G G PG+ G G G PG
Sbjct: 252 GDDGEAGKPGKAGERGPPGPQGARGFP----GTPGLPGV-KGHRGYPGLDGAKGEAGAPG 306
Query: 419 V---GGVPGVGISPEAQAAAAAKAAKYGLVP-GVGVAPGVGVAPGVGVAPG-VGLAPGVG 473
V G PG SP + P G A G PG PG VG A G G
Sbjct: 307 VKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPG 366
Query: 474 VAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPG 532
G G GP G + A+ G GIPG G PG
Sbjct: 367 FPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG 426
Query: 533 LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVV 590
+ AG PG G PG G L K PG+ G G G G PG G
Sbjct: 427 I---AGAPGFPGPRGPPGPQGATGPL----GPKGQTGEPGIAGFKGEQGPKGEPGPAGPQ 479
Query: 591 GA-GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYG 649
GA GPA A + G +G G G G G PG GL G P A + G
Sbjct: 480 GAPGPAGEEGKRGARGEPGGVGPIGPPGERG-APGNRGFPGQDGLAG-PKGAPGERGPSG 537
Query: 650 VAARPGFGLSPIFPGGACLGKACG 673
+A G P PG L A G
Sbjct: 538 LAGPKGANGDPGRPGEPGLPGARG 561
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 157 bits (398), Expect = 2e-38
Identities = 244/775 (31%), Positives = 275/775 (35%), Gaps = 200/775 (25%)
Query: 36 GVPGGVFYPALGPGGKPLKPVPGGLAG-------------AGLGAGLGAFPAVTFP-GAL 81
G PG P GP G P P P GL G AG GA LG P G
Sbjct: 84 GEPGTPGNP--GPPGPPGPPGPPGLGGNFAAQMAGGFDEKAG-GAQLGVMQGPMGPMGPR 140
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVY- 140
P G A A + + G G PGV G G PG KPG G PG
Sbjct: 141 GPPGPAGAPGP-QGFQGNPGEPGEPGVSGPMGPRG----PPGPPGKPGDDGEAGKPGKAG 195
Query: 141 ---PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGA--FAGIPGV-------GPFGGP 188
P G FPG LPGV G PG+ GA AG PGV G G P
Sbjct: 196 ERGPPGPQGARGFPGTPGLPGVKGHRGY----PGLDGAKGEAGAPGVKGESGSPGENGSP 251
Query: 189 QPGVPLGYPIKAPKL--------------PGGYGLPYTTGKLPYGYGPG--GVAGAAGKA 232
P P G P + + PG G P G P G GPG G GA G+A
Sbjct: 252 GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG--PAG-GPGFPGAPGAKGEA 308
Query: 233 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGV--------LPGV-GGAGVPGVPGA----- 278
G PTG GP+ A + G AG +PG G AG PG+ GA
Sbjct: 309 G-PTGAR-GPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPG 366
Query: 279 ---------------------IPGIGGIAG----------VGTPAAAAAAAAAAKAAKYG 307
PGI G G G A A K G
Sbjct: 367 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARG 426
Query: 308 AAAGLVPGGPGFGPGVVGVPG-AGVPG-------VGVPGA-------------GIPVVPG 346
G+ P GP PG G PG G PG G PG G P PG
Sbjct: 427 EPGGVGPIGP---PGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPG 483
Query: 347 -AGIPGA----AVPGVVSPEAAAKAAAKAAKYGARPG----VGVGGIPTYGVGAGGFPGF 397
G+PGA PG P+ + + G RPG G G P G GFPG
Sbjct: 484 EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDG-RPGPPGPQGARGQP----GVMGFPG- 537
Query: 398 GVGVGGIPGVAGVPGVGGVPGVGGVPGV-----GISPEAQAAAAAKAAKYGLVPGVGVAP 452
G G PG AG G+ G PG+ G+PG P A A + + G AP
Sbjct: 538 PKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQG-------AP 590
Query: 453 GVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQL 511
G G+ PG PG G PG PG APG +GP G A+ L
Sbjct: 591 GPSGFQGLPGPPG---PPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQG-L 646
Query: 512 RAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA------- 564
+ GL G PG G G AG PG G PG +PG AA A
Sbjct: 647 QGPRGL-PGTPGTD---GPKGASGPAGPPG---AQGPPGLQGMPGERGAAGIAGPKGDRG 699
Query: 565 ----KYGAAVPGVLGGLGALGGVGIPG--------GVVG-AGPAAAAAAAKAAAKAAQFG 611
K PG GG G G +G PG G VG GPA +A A A + + G
Sbjct: 700 DVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETG 759
Query: 612 LVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G AG G G G PG G G +A + G A PG P P GA
Sbjct: 760 PPGPAGFAG-PPGADGQPGAKGEQG-------EAGQKGDAGAPG----PQGPSGA 802
Score = 155 bits (392), Expect = 1e-37
Identities = 213/679 (31%), Positives = 243/679 (35%), Gaps = 93/679 (13%)
Query: 28 GVPGAIPGGVPGGVFYP--ALGPGGKPLKPVPGGLAGAGLGAGLGAFP------------ 73
G PGA P G P A GP G+P P G AGA G P
Sbjct: 300 GAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIA 359
Query: 74 -AVTFPGALVPGGVADAAAAY--KAAKAGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKP 128
A FPG P G A K G+ G G G G PQ PG +
Sbjct: 360 GAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEE 419
Query: 129 GKVPGVGLP-GVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFG 186
GK G P GV P G PG R PG PG AG K APG G +G+ G
Sbjct: 420 GKRGARGEPGGVGPIGP-PGERGAPGNRGFPGQDGLAGPK-GAPGERGP-SGLAGPKGAN 476
Query: 187 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKL-PYG-YGPGGVAGAAGKAGYPTGTGVGPQA 244
G PG P P LPG GL G P G GP G G G+ G P GPQ
Sbjct: 477 G-DPGRP-----GEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPP-----GPQG 525
Query: 245 AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVGTPAAAAAAAAAAK 302
A GA G G G+PG PG +PG G G P A A +
Sbjct: 526 ARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGP--PGPAGPAGE 583
Query: 303 AAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPG-AAVPGVVS 359
+ GA PG GF PG G PG G G PG G+PG A PG+V
Sbjct: 584 RGEQGA-----PGPSGFQGLPGPPGPPGEG----GKPG-------DQGVPGEAGAPGLVG 627
Query: 360 PEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGV 419
P + GA+ G G+P G P G G PG G PG+ G+PG
Sbjct: 628 PRGERGFPGERGSPGAQGLQGPRGLP--GTPGTDGPKGASGPAGPPGAQGPPGLQGMPGE 685
Query: 420 GGVPGVG--------ISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPG 471
G G+ + + A K GL +G PG A G G PG
Sbjct: 686 RGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG-PPGPAGANGEKGEVG---PPG 741
Query: 472 VGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVG 529
+ G APG G GP G A + + AK + A G AG PG G
Sbjct: 742 PAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSG 801
Query: 530 VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGV 589
PG GV G G G PGA PG G +G G G PG
Sbjct: 802 APGPQGPTGVTG---PKGARGAQGPPGA----------TGFPGAAGRVGPPGSNGNPGPP 848
Query: 590 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG--VGGLGVPGVGGLGGI--PPAAAAKA 645
GP+ A + G G GL G G G PG G G PP A
Sbjct: 849 GPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLA 908
Query: 646 AKYGVAARPGFGLSPIFPG 664
+ G+ PG FPG
Sbjct: 909 GQRGIVGLPGQRGERGFPG 927
Score = 145 bits (367), Expect = 9e-35
Identities = 223/677 (32%), Positives = 251/677 (37%), Gaps = 108/677 (15%)
Query: 26 PGGV-PGAIPG--GVPGGVFYPA----LGPGGKPLKPVPGGLAGA-GLGAGLGAFPAVTF 77
PGGV P PG G PG +P GP G P + P GLAG G G
Sbjct: 428 PGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGL 487
Query: 78 PGAL-VPGGVADAAAAYKAAKAGA-GLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVG 135
PGA + G DA K +GA G G PG G + G QPG PG G
Sbjct: 488 PGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARG----QPGVMGFPGPKGANG 543
Query: 136 LPGVYPGGVLPGARFPGVGVLPGVP--TGAGVKPKAPGVGGAFA--GIPGVGPFGGPQPG 191
PG LPGA PG+ LPG TGA P G G G PG F G PG
Sbjct: 544 EPGKAGEKGLPGA--PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQG-LPG 600
Query: 192 VPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAA 250
P G P + K PG G+P G P GP G G G+ G P G+ GP+
Sbjct: 601 PP-GPPGEGGK-PGDQGVPGEAGA-PGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPG 657
Query: 251 KAAAKFGAGAAGVLPGVGGA----GVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAK 305
K +G AG PG G G+PG GA GI G G G A K
Sbjct: 658 TDGPKGASGPAGP-PGAQGPPGLQGMPGERGA-AGIAGPKGDRGDVGEKGPEGAPGKDGG 715
Query: 306 YGAAAGLVPGGPGFG---------PGVVGVPGA-GVPG----VGVPG-AGIPVVPGA-GI 349
G + P GP PG G GA G PG G PG AG PGA G
Sbjct: 716 RGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQ 775
Query: 350 PG-------------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 396
PG A PG P A G + G G P GA GFPG
Sbjct: 776 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP----GATGFPG 831
Query: 397 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL-----VPGVGVA 451
G G PG G PG G PG G G + +A + GL PG
Sbjct: 832 -AAGRVGPPGSNGNPGPPGPPGPSGKDGPK-GARGDSGPPGRAGEPGLQGPAGPPGEKGE 889
Query: 452 PGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 510
PG G PG GLA G+ G+ G PG+ PG K A A+ +
Sbjct: 890 PGDDGPSGAEGPPGPQGLAGQRGIV-GLPGQRGERGFPGL-PGPSGEPGKQGAPGASGDR 947
Query: 511 LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 570
G PG VG PGL AG PG G PG PG A A V
Sbjct: 948 ---------GPPG---PVGPPGLTGPAGEPG---REGSPGADGPPGRDGA-------AGV 985
Query: 571 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG-LGGLGV------ 623
G G GA+G G PG GPA +A G +G +G G G+
Sbjct: 986 KGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1045
Query: 624 ----GGLGVPGVGGLGG 636
G G PG GL G
Sbjct: 1046 RGDKGEAGEPGERGLKG 1062
Score = 142 bits (357), Expect = 1e-33
Identities = 221/705 (31%), Positives = 256/705 (36%), Gaps = 120/705 (17%)
Query: 23 PSRPG--GVPGAI-----PGGV-PGGVFYPALGPG--GKPLKPVPGGLAGAGLGAGLGAF 72
P RPG G+PGA PG P G P+ PG G+P P P G G G+ F
Sbjct: 479 PGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQ---PGVMGF 535
Query: 73 PAVT-------------FPGAL----VPGGVADAAAAYKAAKAGA----GLGGVPGVGGL 111
P PGA +PG + AA AG G G PG G
Sbjct: 536 PGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGF 595
Query: 112 GVSAGAVVPQPGAGVKPGK--VPG-VGLPGV--------YPGGV-LPGAR-FPGVGVLPG 158
G P PG G KPG VPG G PG+ +PG PGA+ G LPG
Sbjct: 596 QGLPGPPGP-PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPG 654
Query: 159 VPTGAGVKPKA-----PGVGG--AFAGIPG-------VGPFGGPQPGVPLGYPIKAPKLP 204
P G K + PG G G+PG GP G + V P AP
Sbjct: 655 TPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP-KGDRGDVGEKGPEGAPGKD 713
Query: 205 GGYGLPYTTGKL-PYG-------YGPGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAK 255
GG GL G P G GP G AG+AG G P G GP A A A
Sbjct: 714 GGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGAD 773
Query: 256 FGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAA 310
GA G G G G PG PG G GV P A A A + AA
Sbjct: 774 GQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA 833
Query: 311 GLV-PGGPGFGPGVVGVPGA----GVPGV----GVPG-AGIPVVPG-AGIPGA-AVPGVV 358
G V P G PG G PG G G G PG AG P + G AG PG PG
Sbjct: 834 GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDD 893
Query: 359 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG 418
P A G R G+ G+P G GFPG +PG +G PG G PG
Sbjct: 894 GPSGAEGPPGPQGLAGQR---GIVGLPGQR-GERGFPG-------LPGPSGEPGKQGAPG 942
Query: 419 VGGVPGVG--ISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAP 476
G G + P A + + G +PG PG A GV G A
Sbjct: 943 ASGDRGPPGPVGPPGLTGPAGEPGREG-------SPGADGPPGRDGAAGVKGDRGETGAV 995
Query: 477 GVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGV 535
G APG +PG P G + A+ + + GA GI G G G
Sbjct: 996 GAPGAPGPPGSPG--PAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG 1053
Query: 536 GAGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGA-AVPGVLGGLGALGGVGIPG 587
G GL G G +PG A+ A G PG +G G G GIPG
Sbjct: 1054 EPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPG 1113
Query: 588 GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
+ GP + A G G G G G+ G+G
Sbjct: 1114 PIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLG 1158
Score = 128 bits (321), Expect = 2e-29
Identities = 185/577 (32%), Positives = 207/577 (35%), Gaps = 58/577 (10%)
Query: 94 KAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGV 153
K A G G PG G PG PG GL G + + G
Sbjct: 74 KGAPGPRGRDGEPGTPG----------NPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAG 123
Query: 154 GVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGP-----QPGV--PLGYPIKAPKLPGG 206
G GV G + P P AG PG F G +PGV P+G P P PG
Sbjct: 124 GAQLGVMQGP-MGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG-PRGPPGPPGK 181
Query: 207 YGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLP 265
G GK P G G G G G+P G+ G + AK AGA GV
Sbjct: 182 PGDDGEAGK-PGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG 240
Query: 266 GVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVV 324
G G G PG + G G+ G G A AA A + G A P GP GPG
Sbjct: 241 ESGSPGENGSPGPM-GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFP 299
Query: 325 GVPG----AGVPGV-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV 379
G PG AG G G GA P G PG PG P A+ GA+
Sbjct: 300 GAPGAKGEAGPTGARGPEGAQGP----RGEPG--TPGSPGPAGASGNPGTDGIPGAKGSA 353
Query: 380 GVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAA 437
G GI GA GFPG G G G G G G PG+ G G P+ + A
Sbjct: 354 GAPGI----AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQ-GPKGEPGPAG 408
Query: 438 KAAKYGLVPGVGVAPGVGVAPGVGV--APGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGG 494
G G G GVG PG APG PG G APG GP G
Sbjct: 409 PQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSG 468
Query: 495 VAA--AAKSAAKVAAKAQLRAAAGL-----GAGIPGLGVGVGVPGLGVGAGVPGLGVGAG 547
+A A + L A GL AG G G PG G PG G
Sbjct: 469 LAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARG 528
Query: 548 VPGFGAVPGALAA----AKAAKYG-AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAK 602
PG PG A KA + G PG+ G G G G G AGPA
Sbjct: 529 QPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQG 588
Query: 603 AAAKAAQFGLVGAAGLGGLG--VGGLGVPGVGGLGGI 637
A + GL G G G G G GVPG G G+
Sbjct: 589 APGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGL 625
Score = 120 bits (302), Expect = 3e-27
Identities = 152/476 (31%), Positives = 170/476 (35%), Gaps = 47/476 (9%)
Query: 222 PGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA----GVPGVPG 277
PG + G G P GPQ A + G G PG G G PG PG
Sbjct: 40 PGDIKDIVGPKGPP-----GPQGPAGEQGPRGDRGDKGEKGA-PGPRGRDGEPGTPGNPG 93
Query: 278 --AIPGIGGIAGVGTPAAAAAAAA---AAKAAKYGAAAG-LVPGGPGFGPGVVGVPG--- 328
PG G G+G AA A A A+ G G + P GP PG G PG
Sbjct: 94 PPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 153
Query: 329 -AGVPG-VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 386
G PG G PG P+ P G PG PG + A KA + G G G P
Sbjct: 154 FQGNPGEPGEPGVSGPMGP-RGPPGP--PGKPGDDGEAGKPGKAGERGPPGPQGARGFP- 209
Query: 387 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGV---GGVPGVGISPEAQAAAAAKAAKYG 443
G G PG G G PG+ G G G PGV G PG SP +
Sbjct: 210 ---GTPGLPGV-KGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGR 265
Query: 444 LVP-GVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKS 501
P G A G PG PG VG A G G G G GP G
Sbjct: 266 TGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGE 325
Query: 502 AAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA 560
+ A+ G GIPG G PG+ AG PG G PG G L
Sbjct: 326 PGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI---AGAPGFPGPRGPPGPQGATGPL-- 380
Query: 561 AKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA-GPAAAAAAAKAAAKAAQFGLVGAAG 617
K PG+ G G G G PG G GA GPA A + G +G G
Sbjct: 381 --GPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPG 438
Query: 618 LGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACG 673
G G G PG GL G P A + G+A G P PG L A G
Sbjct: 439 ERG-APGNRGFPGQDGLAG-PKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARG 492
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 152 bits (384), Expect = 1e-36
Identities = 224/723 (30%), Positives = 257/723 (35%), Gaps = 145/723 (20%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGV 86
G+PGAI G PG A GP G P P G AG G G+ P G+
Sbjct: 417 GLPGAIGTDGTPG-----AKGPTGSPGTSGPPGSAGPPGSPGP--------QGSTGPQGI 463
Query: 87 ADAAA--AYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVK-PGKVPG-VGLPGVYPG 142
K AG G PG G+ G + P G + P PG VG PG
Sbjct: 464 RGQPGDPGVPGFKGEAGPKGEPGPHGI---QGPIGPPGEEGKRGPRGDPGTVGPPGPVGE 520
Query: 143 GVLPGAR-FPGVGVLPGVPTGA----------GVK--------PKAPGVGGA--FAGIPG 181
PG R FPG LPG P GA G K P PG+ GA G PG
Sbjct: 521 RGAPGNRGFPGSDGLPG-PKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPG 579
Query: 182 V-------GPFGGP----QPGVPLGYPIKAPKLPGGYGLPYTTGKL--PYGYGPGGVAGA 228
V GP G P +PG P I+ PG GLP G P G G AG
Sbjct: 580 VQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQ--PGSMGLPGPKGSSGDPGKPGEAGNAGV 637
Query: 229 AGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVL-----------PGVGGA----GV 272
G+ G P G VGP A + G G PG GG GV
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697
Query: 273 PGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGV 331
PG PGA+ +G G P + G A G P GP PG G PG G
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757
Query: 332 PGV-GVPG-AGIPVVPG----------------AGIPGA-AVPGVVSPEAAAKAAAKAAK 372
PG+ G+PG GI PG AG GA +PG + P A + +
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGE 817
Query: 373 YGARPGVGVGGI-----------PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGG 421
G R VG G PT GA GF G G G PGV G PG G G G
Sbjct: 818 PGPRGLVGPPGSRGNPGSRGENGPT---GAVGFAG-PQGPDGQPGVKGEPGEPGQKGDAG 873
Query: 422 VPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGV 480
PG P+ A + G VPG+ G PG PG G G A G
Sbjct: 874 SPG----PQGLAGSPGPHGPNG-VPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGP 928
Query: 481 APGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-------------------AGI 521
A +G GP G+ S +V + G G AG
Sbjct: 929 AGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGT 988
Query: 522 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 581
G VG+PG G+PGL AG PG GA PG +G G+ G
Sbjct: 989 TGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATG-------DKGPPGPVGPPGSNG 1041
Query: 582 GVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAA 641
VG PG AG A + G G AGL G G PG G G P A
Sbjct: 1042 PVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGL----PGSQGAPGTPGPVGAPGDA 1097
Query: 642 AAK 644
+
Sbjct: 1098 GQR 1100
Score = 138 bits (347), Expect = 2e-32
Identities = 227/756 (30%), Positives = 272/756 (35%), Gaps = 165/756 (21%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGL--------AGAGLGAGLGAFPA 74
P P G+ G GVPG P GP G P P P GL AG +GLG+
Sbjct: 154 PRGPQGIDGE--PGVPGQPGAP--GPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVG 209
Query: 75 VTFPGALVPGGVADAAAAYKAAKAGAGLGGVPG-------VGGLGVSAGAVVP--QPGAG 125
+ PG++ P G + + GAG G PG +G +G S G P +PG
Sbjct: 210 L-MPGSVGPVGPR-GPQGLQGQQGGAGPTGPPGEPGDPGPMGPIG-SRGPEGPPGKPGED 266
Query: 126 VKPGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVK----PKAP-GVGGAFAGI 179
+PG+ G PG PGAR FPG LPG+ G K PK G G+
Sbjct: 267 GEPGRN---GNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEA 323
Query: 180 PGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTG 237
GP G P P G P + +L G G P G +P GP G G G +G+P
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRL-GPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGN 382
Query: 238 TGVGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGAGVP------GVPGA-----IPGIGGI 285
G+ +A A G PG VG G+P G PGA PG G
Sbjct: 383 PGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGP 442
Query: 286 AG-------------------------VGTPAAAAAAAAAAKAAKYGAAAGLVP------ 314
G G P A + +G + P
Sbjct: 443 PGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGK 502
Query: 315 GGPGFGPGVVGVPG----AGVPG-VGVPGA-GIPVVPGA--------------------- 347
GP PG VG PG G PG G PG+ G+P GA
Sbjct: 503 RGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR 562
Query: 348 ----GIPGA----AVPGVVSPEAAAKAAAKAAKYGARPG----VGVGGIPTYGVGAGGFP 395
G+PGA PGV PE + G RPG +G+ G P G+ G P
Sbjct: 563 PGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDG-RPGPPGSIGIRGQP----GSMGLP 617
Query: 396 GFGVGVGGIPGVAGVPGVGGVPGVGGVPG----VGIS-PEAQAAAAAKAAKYGL------ 444
G G G PG G G GVPG G PG VG S P A + + G
Sbjct: 618 G-PKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGF 676
Query: 445 --VPGVGVAPGVGVAPGVGVAPGVGLA------------PGVGVAPGVGVAPG-VGVAPG 489
+PG PG G PG PG A PG PG+ PG G+A G
Sbjct: 677 QGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGG 736
Query: 490 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL---GVGAGVPGLGVGA 546
GP G K + + GL G+PG G PG G G G A
Sbjct: 737 HGPDG----PKGSPGPSGTPGDTGPPGL-QGMPGERGIAGTPGPKGDRGGIGEKGAEGTA 791
Query: 547 GVPGFGAVPGALA----AAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAK 602
G G +PG L A + G PG G +G G G PG GP A A
Sbjct: 792 GNDGARGLPGPLGPPGPAGPTGEKGE--PGPRGLVGPPGSRGNPGSRGENGPTGAVGFAG 849
Query: 603 AAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 638
Q G+ G G G G G PG GL G P
Sbjct: 850 PQGPDGQPGVKGEPGEPG-QKGDAGSPGPQGLAGSP 884
Score = 128 bits (321), Expect = 2e-29
Identities = 216/707 (30%), Positives = 252/707 (35%), Gaps = 137/707 (19%)
Query: 23 PSRPG--GVPGA--IPG--GVPG--GVFYPALGPG--GKPLKPVPGGLAGAGLGAGLGAF 72
P RPG G+PGA + G GV G G P PG G+P P G+ G GL
Sbjct: 560 PGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGL--- 616
Query: 73 PAVTFPGALVPGGVADAAAAYKAAKAGA-GLGGVPGVGGLGVSAGAVVPQPGAGVKPGKV 131
PG G D +A AG G G PG G +G V P PG + G+
Sbjct: 617 -----PGP--KGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP-PGLAGERGEQ 668
Query: 132 PGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGPQP 190
G PG P G F G+ PG P G G KP GV G PG VGP G P
Sbjct: 669 ---GPPG--PTG------FQGLPGPPG-PPGEGGKPGDQGVPGD----PGAVGPLG---P 709
Query: 191 GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-------GPQ 243
G P + + PG GLP G + G+GP G G+ G +G P TG G +
Sbjct: 710 RGERGNPGERGE-PGITGLPGEKG-MAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGER 767
Query: 244 AAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAG----------VGTP 291
A + G G G G G G+PG + PG G G VG P
Sbjct: 768 GIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPP 827
Query: 292 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----------------AGVPGV- 334
+ + + GA P GP PGV G PG AG PG
Sbjct: 828 GSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPH 887
Query: 335 ---GVPGA----GIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 386
GVPG G PGA G PG+A G V P A A A G G G P
Sbjct: 888 GPNGVPGLKGGRGTQGPPGATGFPGSA--GRVGPPGPAGAPGPAGPLGEP---GKEGPP- 941
Query: 387 YGVGAGGFPGFGVGVG--GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 444
G G PG VG G G G PG G PG G PG P+ A + G+
Sbjct: 942 ---GLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPG----PDGPPGPAGTTGQRGI 994
Query: 445 V--PGVGVAPGVGVAPGVGVAPG----VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAA 498
V PG G+ PG PG G G VG G GP G A
Sbjct: 995 VGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGN 1054
Query: 499 AKSAAKVAAKAQLR-----AAAGL--GAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 551
+ + A + AGL G PG VG PG G PG G PG
Sbjct: 1055 DGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGR 1114
Query: 552 GA---VPGALAA-AKAAKYG----------------AAVPGVLGGLGALGGVGIPGGVVG 591
+PG +G +PG G G G GIPG
Sbjct: 1115 AGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGP 1174
Query: 592 AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 638
GP + G +G G+ G VG G G G G P
Sbjct: 1175 RGPPGPVGPSGKEGNPGPLGPIGPPGVRG-SVGEAGPEGPPGEPGPP 1220
Score = 122 bits (306), Expect = 1e-27
Identities = 196/610 (32%), Positives = 225/610 (36%), Gaps = 57/610 (9%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
PS P G PG G G P GP G P P G G G G P PGA+
Sbjct: 652 PSGPVGPPGL--AGERGEQGPP--GPTGFQGLPGPPGPPGEGGKPGDQGVPGD--PGAVG 705
Query: 83 PGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKPGKVPGVGLPGVY 140
P G + G+ G+PG G+ G P+ PG PG GL G
Sbjct: 706 PLGPR-GERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQG-- 762
Query: 141 PGGVLPGARFPGVGVLPGVPTG--AGVKPK-APGVGG--AFAGIPGVGPFGGPQPGVPLG 195
+PG R G+ PG P G G+ K A G G G+PG P G P P P G
Sbjct: 763 ----MPGER--GIAGTPG-PKGDRGGIGEKGAEGTAGNDGARGLPG--PLGPPGPAGPTG 813
Query: 196 YPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAK 255
+ P G G P + G P G G GA G AG P G G + K
Sbjct: 814 EKGE-PGPRGLVGPPGSRGN-PGSRGENGPTGAVGFAG-PQGPD-GQPGVKGEPGEPGQK 869
Query: 256 FGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVP 314
AG+ G G+ G+ P P +PG+ G G G P A +A + G A P
Sbjct: 870 GDAGSPGP-QGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGP 928
Query: 315 GGPGFGPGVVGVPGA-GVPG----VGVPG-AGIPVVPG-AGIPGA-AVPGVVSPEAAAKA 366
GP PG G PG G PG VG G AG P PG G PG PG P A
Sbjct: 929 AGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGT 988
Query: 367 AAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVG 426
+ G G G+P G G PG VG G G G PG G PG G G
Sbjct: 989 TGQRGIVGMPGQRGERGMPGLP-GPAGTPG-KVGPTGATGDKGPPGPVGPPGSNGPVGEP 1046
Query: 427 ISPEAQAAAAAKAAKYGLVPGVGVA--PGVGVAPGVGVAPGVGLAPGVGVAPG-VGVAPG 483
PE A + G V G PG PG APG PG APG G
Sbjct: 1047 -GPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGT---PGPVGAPGDAGQRGD 1102
Query: 484 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGVGAGVPGL 542
G IGP G A + G G G G+ GL G G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGE 1162
Query: 543 GVGAGVPG-FG--AVPGALA-AAKAAKYGA----AVPGVLGGLGALGGVGIPGGVVGAGP 594
AG+PG FG PG + + K G PGV G +G G G PG GP
Sbjct: 1163 QGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGP 1222
Query: 595 AAAAAAAKAA 604
AA
Sbjct: 1223 PGPPGHLTAA 1232
Score = 93.6 bits (231), Expect = 5e-19
Identities = 144/494 (29%), Positives = 176/494 (35%), Gaps = 44/494 (8%)
Query: 204 PGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGV 263
PGG + G+ PG V G G P G P + + K G G
Sbjct: 100 PGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAG--PPGSQGPRGERGPKGRPGPRGP 157
Query: 264 LPGVGGAGVPGVPGA-----IPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPG 318
G GVPG PGA P G G+ P +A A K+ G+ GL+PG G
Sbjct: 158 QGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSG-LGSQVGLMPGSVG 216
Query: 319 -FGP-GVVGVPG--AGVPGVGVPGAGIPVVPGAGIPGAAVP-GVVSPEAAAKAAAKAAKY 373
GP G G+ G G G PG G PG P G PE + +
Sbjct: 217 PVGPRGPQGLQGQQGGAGPTGPPGE-------PGDPGPMGPIGSRGPEGPPGKPGEDGEP 269
Query: 374 G--ARPG-VGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV--GIS 428
G PG VG G P GA GFPG G+ G+ G G G+ G G G PG
Sbjct: 270 GRNGNPGEVGFAGSP----GARGFPG-APGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAG 324
Query: 429 PEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAP 488
P A G+ PG G APG A G+ PG G+ + G P
Sbjct: 325 PTGPMGAMGPLGPRGM-PGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNP 383
Query: 489 GI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVGA 546
G+ G G A + + +G+ G+PG G PG G PG +
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGT---S 440
Query: 547 GVPGFGAVPGA-----LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAA 601
G PG PG+ + + PGV G G G G PG GP
Sbjct: 441 GPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEE 500
Query: 602 KAAAKAAQFGLVGAAG-LGGLGV-GGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLS 659
G VG G +G G G G PG GL G P A + G + G
Sbjct: 501 GKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPG-PKGAQGERGPVGSSGPKGSQGD 559
Query: 660 PIFPGGACLGKACG 673
P PG L A G
Sbjct: 560 PGRPGEPGLPGARG 573
Score = 73.9 bits (180), Expect = 4e-13
Identities = 124/402 (30%), Positives = 139/402 (34%), Gaps = 64/402 (15%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPA----LGPGGKPLKPVPGGLAGA-------GLGA 67
P P GVPG G G PG +P +GP G P P G G GL
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945
Query: 68 GLGAFPAVTFPG-ALVPGGVADAAAAYKAAKAG-------AGLGGVPGVGGLGVSAG--A 117
G+ V G A PGG D + + G AG G G+ G+ G
Sbjct: 946 DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005
Query: 118 VVPQPGAGVKPGKVPGVGLPGVY--PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGA 175
+ PG PGKV G G PG V P VG PG P G PG GA
Sbjct: 1006 MPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGE-PG-PEGPAGNDGTPGRDGA 1063
Query: 176 FAGIPGVGPFGGPQPGVPLGYPIK--APKLPGGYGLPYTTGKL--PYGYGPGGVAGAAGK 231
VG G P G P AP PG G P G+ P GP G G AGK
Sbjct: 1064 ------VGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117
Query: 232 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG-VGT 290
G P GPQ + G G G G+ G+PG PG G G G
Sbjct: 1118 RGLP-----GPQGPRGDKGDHGDRGDRGQKGHR---GFTGLQGLPGP-PGPNGEQGSAGI 1168
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP 350
P G P GP PGV G G P G PG P P G P
Sbjct: 1169 PGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGP-EGPPGEPGPPGP-PGPP 1226
Query: 351 G---AAVPGVVS----------PEAAAKAAAKAAKYGARPGV 379
G AA+ ++ PE AA K PGV
Sbjct: 1227 GHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGV 1268
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 152 bits (383), Expect = 1e-36
Identities = 205/667 (30%), Positives = 239/667 (35%), Gaps = 89/667 (13%)
Query: 26 PGGVPGAIPGGVPGGVFYPALGPG-----GKPLKPVPGGLAGAGLGAGLGAFPAVTFPGA 80
P G PG P G PA PG G P KP G G G FP PG
Sbjct: 116 PAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGT--PG- 172
Query: 81 LVPGGVADAAAAYKAAKAGAGLGGV---PGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 137
+PG +K + GL G+ PG G+ GA PG PG+ GLP
Sbjct: 173 -LPG--------FKGIRGHNGLDGLKGQPGAPGVKGEPGA----PGENGTPGQTGARGLP 219
Query: 138 GV-----YPGGVLPGARFPGVG-VLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPG 191
G PG VG V P P G+ P PG G I VG G P
Sbjct: 220 GERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPA 279
Query: 192 VPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAA 248
P G + P L G G P G L G G+ G AG G P G+ GP AA A
Sbjct: 280 GPRG-EVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGA 338
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGV--PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKY 306
G AG G G PG P PG G G P A +A
Sbjct: 339 TGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGP------ 392
Query: 307 GAAAGLVPGGPGF--GPGVVGVPGA-GVPGV-GVPG-------AGIPVVPG-AGIPGAAV 354
PG PG PG G+PGA G GV G PG AG+ G AG PG
Sbjct: 393 -------PGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGE-- 443
Query: 355 PGVVSPEAAAKAAAKAAKYGARPGVGVGGI-----PTYGVGAGGFPGFGVGVGGIPGVAG 409
PG++ P + G VG+ GI P GA G PG +G G G G
Sbjct: 444 PGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPG-NIGFPGPKGPTG 502
Query: 410 VPGVGGVPGVGGVPGV--GISPEAQAAAAAKAAKYGLVPGVGV-----APGVGVAPG-VG 461
PG G G G+ G P+ A G+ G G PG PG G
Sbjct: 503 DPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSG 562
Query: 462 VAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AG 520
A VG G+ G+ G GP G + AA + ++ G G
Sbjct: 563 PAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKG 622
Query: 521 IPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGAL 580
PG+ VG G +G+PG AG+PG K K + G +G G
Sbjct: 623 EPGVVGAVGTAGPSGPSGLPGERGAAGIPG----------GKGEKGEPGLRGEIGNPGRD 672
Query: 581 GGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPA 640
G G PG V GPA A A A G G G G G +G G G G A
Sbjct: 673 GARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPG-ERGEVGPAGPNGFAGPAGA 731
Query: 641 AAAKAAK 647
A AK
Sbjct: 732 AGQPGAK 738
Score = 151 bits (382), Expect = 2e-36
Identities = 214/666 (32%), Positives = 250/666 (37%), Gaps = 86/666 (12%)
Query: 26 PGGVPGAIPGGV-PGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPG 84
P G+PG+ PG + P G P +G G +P P G AGA G FP P PG
Sbjct: 449 PRGLPGS-PGNIGPAGKEGP-VGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTG-DPG 505
Query: 85 GVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGV 144
D K AGL G G G + GA P GV+ GK G PG
Sbjct: 506 KNGD--------KGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQ-GPPGPPGFQG 556
Query: 145 LPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGPQPGVPLGYPIKAPKL 203
LPG P P G KP G+ G F G+PG GP G P
Sbjct: 557 LPG---------PSGPAGEVGKPGERGLHGEF-GLPGPAGPRGERGP------------- 593
Query: 204 PGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGV 263
PG G TG + GP G G G G P VG A + + GAAG+
Sbjct: 594 PGESGAAGPTGPIG-SRGPSGPPGPDGNKGEPGV--VGAVGTAGPSGPSGLPGERGAAGI 650
Query: 264 LPGVGGAGVPGVPGAI--PGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG 320
G G G PG+ G I PG G G G A A A + GAA P GP
Sbjct: 651 PGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 710
Query: 321 PGVVGVPGAGVPGVGVPGAGIPVVPGA-GIPGAAVP----GVVSPEAAAKAAAKAAKYGA 375
PG G G P AG PGA G GA P GVV P AA A G
Sbjct: 711 PGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGP 770
Query: 376 RPGV----GVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEA 431
PG G GG P G GFPG G G PG +G+ G G PG G G+ P
Sbjct: 771 -PGPAGSRGDGGPP----GMTGFPG-AAGRTGPPGPSGISGPPGPPGPAGKEGLR-GPRG 823
Query: 432 QAAAAAKAAKYGLV--PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG------ 483
+ + G V PG G G PG G+ APG+ PG
Sbjct: 824 DQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERG 883
Query: 484 -VGVAPGIG-PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPG 541
GVA +G PG + A A+ A + G+ G PG G PG G PG
Sbjct: 884 LPGVAGAVGEPGPLGIAGPPGARGPPGAV--GSPGVN-GAPGEAGRDGNPG---NDGPPG 937
Query: 542 LGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAA 601
G G PG + A A PG G +G G G G +GP A A
Sbjct: 938 RDGQPGHKGERGYPGNIGPVGA----AGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAV 993
Query: 602 KAAAKAAQFGLVGAAG-LGGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLS 659
+ G+ G G G G GL G+ G GL G+P A +G PG +
Sbjct: 994 GPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLP----GIAGHHGDQGAPG-SVG 1048
Query: 660 PIFPGG 665
P P G
Sbjct: 1049 PAGPRG 1054
Score = 148 bits (374), Expect = 1e-35
Identities = 210/663 (31%), Positives = 247/663 (37%), Gaps = 103/663 (15%)
Query: 34 PGGVPG--GVFYPALGPGGKPLKPVPGGLAGA------GLGAGLGAFPAVTFPGALVPGG 85
P G PG G P GP G P P P GL G G G GLG P G + P G
Sbjct: 46 PPGPPGRDGEDGPT-GPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPM----GLMGPRG 100
Query: 86 VADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVL 145
AA A + G G PG G AGA P AG PGK G PG PG
Sbjct: 101 PPGAAGA-PGPQGFQGPAGEPGEPGQTGPAGARGP---AG-PPGKAGEDGHPGK-PGR-- 152
Query: 146 PGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGG--PQPGVPLGYPIKA-PK 202
PG R GV+ P GA P PG+ G F GI G G QPG P +K P
Sbjct: 153 PGER----GVVG--PQGARGFPGTPGLPG-FKGIRGHNGLDGLKGQPGAP---GVKGEPG 202
Query: 203 LPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAG 262
PG G P TG G+ G G+ G P GP A + G G
Sbjct: 203 APGENGTPGQTGAR-------GLPGERGRVGAP-----GPAGARGSDGSV------GPVG 244
Query: 263 VLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPG 322
+G AG PG PGA G I VG A A + G + P GP PG
Sbjct: 245 PAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSG---PVGPPGNPG 301
Query: 323 VVGVPG----AGVPGVGVPGAGIPVVPG-AGIPG-------AAVPGVVSPEAAAKAAAKA 370
G+ G AG+PGV AG P +PG GIPG G+V A + ++
Sbjct: 302 ANGLTGAKGAAGLPGV----AGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGES 357
Query: 371 AKYGARPGVGVGGIPTYG-----VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV 425
G G G P G G G G G PG+ G PG G+PG G GV
Sbjct: 358 GNKGEPGSAGPQGPPGPSGEEGKRGPNGEAG-SAGPPGPPGLRGSPGSRGLPGADGRAGV 416
Query: 426 GISPEAQAAA-----------AAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGV 474
P ++ A+ A + + GL+ G+ G G VGL PG+
Sbjct: 417 MGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGL-PGIDG 475
Query: 475 APG-VGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPG 532
PG +G A G IG G K K A GA G G G PG
Sbjct: 476 RPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPG 535
Query: 533 LGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGA-------AVPGVLGGLGALGGVG 584
G G G PGF +PG A + K G +PG G G G G
Sbjct: 536 PQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPG 595
Query: 585 IPGGVVGAGPAAAAAAAKAA---AKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAA 641
G GP + + + G+VGA G G G G+PG G GIP
Sbjct: 596 ESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPS-GPSGLPGERGAAGIPGGK 654
Query: 642 AAK 644
K
Sbjct: 655 GEK 657
Score = 79.0 bits (193), Expect = 1e-14
Identities = 90/289 (31%), Positives = 106/289 (36%), Gaps = 26/289 (8%)
Query: 400 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 459
G G G G PG G G G PG P AA+Y GVG+ PG G
Sbjct: 39 GPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYD-GKGVGLGPGPMGLMG 97
Query: 460 VGVAPGVGLAPGVGVAPGVGVAPG----VGVAPGIGPGGVAAAAKS---AAKVAAKAQLR 512
PG APG G PG G A GP G A K +
Sbjct: 98 PRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERG 157
Query: 513 AAAGLGA----GIPGLG--VGV----GVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA-- 560
GA G PGL G+ G+ GL G PG+ G PG PG A
Sbjct: 158 VVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARG 217
Query: 561 --AKAAKYGAAVP-GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 617
+ + GA P G G G++G VG G + AGP A + G G AG
Sbjct: 218 LPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAG 277
Query: 618 LGGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 664
G G +G+PG+ G G P P A G A PG +P PG
Sbjct: 278 PAG-PRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPG 325
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 150 bits (380), Expect = 3e-36
Identities = 208/676 (30%), Positives = 245/676 (36%), Gaps = 158/676 (23%)
Query: 4 LTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGA 63
L P +LLLLL ++ P G GG G + P K ++P+ G G
Sbjct: 2 LGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAG--YAPV-----KYIQPMQKGPVGP 54
Query: 64 GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPG 123
G G + + P L+P + K G G PG G PG
Sbjct: 55 PFREGKGQYLEMPLP--LLPMDL----------KGEPGPPGKPGPRG----------PPG 92
Query: 124 AGVKPGKVPGVGLPGVY----PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGI 179
PGK PG+G PG++ P G PG G PG+P G P PG+ G GI
Sbjct: 93 PPGFPGK-PGMGKPGLHGQPGPAGP-PGFSRMGKAGPPGLPGKVG-PPGQPGLRGE-PGI 148
Query: 180 PGVGPFGGPQ--PGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTG 237
G GP PG+P I P PG G+P GP G G G G P
Sbjct: 149 RGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVP----------GPPGFQGEPGPQGEP-- 196
Query: 238 TGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAA 297
GP G G G LPG G G G PG PG+ G AG+G P
Sbjct: 197 ---GPPGDRGLKGDN----GVGQPG-LPGAPGQG--GAPGP-PGLPGPAGLGKPGLDGLP 245
Query: 298 AAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGAGIPGAAVPG 356
A + G VPG G PG VG G GV GVGVPGA AG+PG P
Sbjct: 246 GAPGDKGESGPPG--VPGPRG-EPGAVGPKGPPGVDGVGVPGA-------AGLPGPQGPS 295
Query: 357 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGV 416
GA+ G G P +G G+ G+ G+PG G G GV
Sbjct: 296 -----------------GAKGEPGTRGPPGL-IGPTGY-----GMPGLPGPKGDRGPAGV 332
Query: 417 PGV---GGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVG 473
PG+ G PG P Q G+G PG+ PG PG PG
Sbjct: 333 PGLLGDRGEPGEDGEPGEQGPQ-----------GLGGPPGL---PGSAGLPGRRGPPGPK 378
Query: 474 VAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG 532
G G PGV G+ GP G+A G PG+ G+PG
Sbjct: 379 GEAGPGGPPGVPGIRGDQGPSGLA-----------------------GKPGVPGERGLPG 415
Query: 533 LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGA 592
G PG G PGF PG PGV G LG G +G+PG
Sbjct: 416 ---AHGPPGPTGPKGEPGFTGRPGG-------------PGVAGALGQKGDLGLPGQPGLR 459
Query: 593 GPAAAAAAAKAAAKAAQFGLVGAAGLGGL----GVGGLGVPGVGGLGGIPPAAAAKAAKY 648
GP+ A GL G G GL G G G PG G G PP
Sbjct: 460 GPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTG-PPGVPGSPGIT 518
Query: 649 GVAARPGFGLSPIFPG 664
G PG P PG
Sbjct: 519 GPPGPPGPPGPPGAPG 534
Score = 61.2 bits (147), Expect = 3e-09
Identities = 85/260 (32%), Positives = 104/260 (40%), Gaps = 38/260 (14%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPA----LGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 76
P GG PG +PG G+PG P GPGG P P G+ G +GL P V
Sbjct: 353 PQGLGGPPG-LPGSAGLPGRRGPPGPKGEAGPGGPPGVP---GIRGDQGPSGLAGKPGVP 408
Query: 77 ----FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGV--KPGK 130
PGA P G K G G PG G+ AGA+ + G+ +PG
Sbjct: 409 GERGLPGAHGPPGPT-------GPKGEPGFTGRPGGPGV---AGALGQKGDLGLPGQPGL 458
Query: 131 VPGVGLPGVY-PGGVLPGARFPGVGVLPGVPTGAGV-KPKAPGVGGAFA--GIPGVGPFG 186
G+PG+ P G + PG+ PG+P G + PG G G+PG
Sbjct: 459 RGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGIT 518
Query: 187 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAA-GKAGYPTGTGVGPQAA 245
GP PG P P PG G TG GGV GA GK G P G+G +A
Sbjct: 519 GP-PGPP-----GPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQ-FGLGELSA 571
Query: 246 AAAAAKAAAKFGAGAAGVLP 265
A A A A +P
Sbjct: 572 HATPAFTAVLTSPFPASGMP 591
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 149 bits (375), Expect = 1e-35
Identities = 165/503 (32%), Positives = 199/503 (39%), Gaps = 79/503 (15%)
Query: 121 QPGAGVKPGK--VPGVGLPGVY----PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 174
+PG PG +PG G+PG+ P G PG PG+ +PG P G+ PG G
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGY-PGVGKPGMPGMPGKPGAMGM----PGAKG 179
Query: 175 AFAGIPGVGPFGGPQPGVPLGYPIKAPKL--PGGYGLPYTTGKLPYG-YGPGGVAGAAGK 231
+GP G P P P G P P + PGG GLP G P G GP G+ G G
Sbjct: 180 EIGQKGEIGPMGIPGPQGPPG-PHGLPGIGKPGGPGLPGQPG--PKGDRGPKGLPGPQGL 236
Query: 232 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTP 291
G G G A PGV G PG+ G PG G+ GVG P
Sbjct: 237 RGPKGDKGFGMPGA-------------------PGVKGP--PGMHGP-PGPVGLPGVGKP 274
Query: 292 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA-GIPVVPG--AG 348
K GA P GP PGV G P G+PG+G PG GIP PG G
Sbjct: 275 GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP--GIPGIGKPGQDGIPGQPGFPGG 332
Query: 349 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPG 406
+PG+ P PG+G G P G GG PG +G G G
Sbjct: 333 KGEQGLPGLPGPPGL-------------PGIGKPGFPGPKGDRGMGGVPG-ALGPRGEKG 378
Query: 407 VAGVPGVGGVPGVGGVPGV--GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAP 464
G PG+GG PG G+PG+ + P + G+V G PG PG+ P
Sbjct: 379 PIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQG-PPGPKGEPGLQGFP 437
Query: 465 GVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG----A 519
G G PG+ PG +G G GV + K + G
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPP 497
Query: 520 GIPGLG---VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGG 576
GIPG+G +G PG+ G PGL G PG G PG A +G PG G
Sbjct: 498 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK-PGV-----AGLHGP--PGKPGA 549
Query: 577 LGALGGVGIPGGVVGAGPAAAAA 599
LG G G+PG GP A
Sbjct: 550 LGPQGQPGLPGPPGPPGPPGPPA 572
Score = 142 bits (358), Expect = 1e-33
Identities = 177/543 (32%), Positives = 215/543 (39%), Gaps = 96/543 (17%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLG 66
A P+ G + L S+ P G PG P G PG P G G KP P G G G
Sbjct: 103 AVPKKGKEIPLASLRGEQGPRGEPG--PRGPPGPPGLPGHGIPGIKGKPGPQGYPGVG-K 159
Query: 67 AGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAG 125
G+ P PGA+ +PG + K G G+PG G PG
Sbjct: 160 PGMPGMPGK--PGAMGMPGAKGEI-----GQKGEIGPMGIPGPQG----------PPG-- 200
Query: 126 VKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV-G 183
P +PG+G PG G LPG P G G+P G++ G G PGV G
Sbjct: 201 --PHGLPGIGKPG---GPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKG 255
Query: 184 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQ 243
P G P P+G P G G P TG P GP G GA G+ G P G P
Sbjct: 256 PPGMHGPPGPVGLP--------GVGKPGVTG-FPGPQGPLGKPGAPGEPG-PQGPIGVPG 305
Query: 244 AAAAAAAKAAAKFGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAK 302
K G PG GG G G+PG +PG G+ G+G P
Sbjct: 306 VQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPG-LPGPPGLPGIGKP--------GFP 356
Query: 303 AAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIPGAAVPGVV 358
K G VPG GP G +G PG G G PG G+P +PG G PGA G
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIG----GPPGEPGLPGIPGPMGPPGAI--GFP 410
Query: 359 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG-VG--- 414
P+ G + G+ G P G PGF +G G PG+ G+PG +G
Sbjct: 411 GPKGEGGIVGPQGPPGPKGEPGLQGFP-------GKPGF-LGEVGPPGMRGLPGPIGPKG 462
Query: 415 -----GVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLA 469
GVPG+ GVPG+ + P+ + G PG+ PG+G G PG+
Sbjct: 463 EAGQKGVPGLPGVPGL-LGPKGEPGIPGDQGLQG-PPGI---PGIGGPSGPIGPPGI--- 514
Query: 470 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 529
PG PG+ PG PGIG GVA K A G PGL G
Sbjct: 515 PGPKGEPGLPGPPGF---PGIGKPGVAGLHGPPGKPGALGP--------QGQPGLPGPPG 563
Query: 530 VPG 532
PG
Sbjct: 564 PPG 566
Score = 133 bits (335), Expect = 5e-31
Identities = 173/485 (35%), Positives = 208/485 (42%), Gaps = 80/485 (16%)
Query: 23 PSRPGGVPG-AIPG--GVPGGVFYPALG-PG--GKPLKPVPGGLAGAGLGAGL-GAFPAV 75
P P G+PG IPG G PG YP +G PG G P KP G+ GA G G +
Sbjct: 131 PPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPM 190
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGK----- 130
PG P G K G GL G PG G G PQ G K K
Sbjct: 191 GIPGPQGPPGPHGLPGIGKPG--GPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMP 248
Query: 131 -VPGV-GLPGVY--PGGV-LPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFA--GIPGVG 183
PGV G PG++ PG V LPG PGV PG P G KP APG G G+PGV
Sbjct: 249 GAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPG-PQGPLGKPGAPGEPGPQGPIGVPGVQ 307
Query: 184 PFGGPQPGVP-LGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV 240
GP PG+P +G P + +PG G P G+ LP GP G+ G GK G+P
Sbjct: 308 ---GP-PGIPGIGKPGQ-DGIPGQPGFPGGKGEQGLPGLPGPPGLPGI-GKPGFP----- 356
Query: 241 GPQAAAAAAAKAAAKFGAGAAGVL--PGVGGA-GVPGVPGAIPGIGGIAG-VGTPAAAAA 296
GP+ A G G + PG+GG G PG+PG IPG G G +G P
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPG-IPGPMGPPGAIGFPGPKGE 415
Query: 297 AAAAAKAAKYGAAA--GL--VPGGPGFGPGVVGVPGA-GVPG-VGVPG-AGIPVVPGAGI 349
G GL PG PGF G VG PG G+PG +G G AG VPG +
Sbjct: 416 GGIVGPQGPPGPKGEPGLQGFPGKPGF-LGEVGPPGMRGLPGPIGPKGEAGQKGVPG--L 472
Query: 350 PGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGIPTYGVGAGGFPGFGVGVGGIPGVA 408
PG VPG++ P+ G PG+ G+GG P+ +G G PG G G+PG
Sbjct: 473 PG--VPGLLGPKGEPGIPGDQGLQGP-PGIPGIGG-PSGPIGPPGIPG-PKGEPGLPGPP 527
Query: 409 GVPGVG-----------------------GVPGVGGVPGVGISPEAQAAAAAKAAKYGLV 445
G PG+G G+PG G PG P +Y
Sbjct: 528 GFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPD 587
Query: 446 PGVGV 450
G+G+
Sbjct: 588 MGLGI 592
Score = 133 bits (334), Expect = 6e-31
Identities = 174/523 (33%), Positives = 202/523 (38%), Gaps = 100/523 (19%)
Query: 142 GGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKA 200
G +P A G G P G P PG+ G GIPG+ GPQ GYP +
Sbjct: 108 GKEIPLASLRGEQGPRGEPGPRG-PPGPPGLPGH--GIPGIKGKPGPQ-----GYPGVGK 159
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGA 260
P +PG G P G +P G G G G G P GPQ G
Sbjct: 160 PGMPGMPGKPGAMG-MPGAKGEIGQKGEIGPMGIP-----GPQ-------------GPPG 200
Query: 261 AGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 319
LPG+G G PG+PG PG G G G P A V G PG
Sbjct: 201 PHGLPGIGKPGGPGLPGQ-PGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGM 259
Query: 320 G--PGVVGVPGAGVPGV-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGAR 376
PG VG+PG G PGV G PG P+ G PGA PG P+ G
Sbjct: 260 HGPPGPVGLPGVGKPGVTGFPGPQGPL----GKPGA--PGEPGPQGPIGVPGVQGPPGI- 312
Query: 377 PGVGV---GGIPTYGVGAGGFPGFG--VGVGGIPGVAGVPGVG--GVPGVGGVPGVGISP 429
PG+G GIP G GFPG G+ G+PG G+PG+G G PG G G+G P
Sbjct: 313 PGIGKPGQDGIP----GQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVP 368
Query: 430 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
A K +G APG+G PG PG+ PG PG PG G
Sbjct: 369 GALGPRGEKGP-------IG-APGIGGPPGEPGLPGI---PGPMGPPGAIGFPGPKGEGG 417
Query: 490 I-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGA 546
I GP G + GL G PG VG PG+ G+PG +G
Sbjct: 418 IVGPQGPPGP-------------KGEPGLQGFPGKPGFLGEVGPPGM---RGLPG-PIGP 460
Query: 547 -------GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA 599
GVPG VPG L PG+ G G G GIPG +GP
Sbjct: 461 KGEAGQKGVPGLPGVPGLLGPK-------GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPG 513
Query: 600 AAKAAAKAAQFGLVGAAGLGGLGVGGL----GVPGVGGLGGIP 638
+ G G G+G GV GL G PG G G P
Sbjct: 514 IPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQP 556
Score = 124 bits (310), Expect = 4e-28
Identities = 163/540 (30%), Positives = 198/540 (36%), Gaps = 109/540 (20%)
Query: 164 GVKPKAPGVGGAFAG-IPGVGPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLP 217
G+KP P + IP P G P +PL A P L G P+ LP
Sbjct: 32 GIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPH----LP 87
Query: 218 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 277
A GK P P A+ + G PG+ G G+PG+ G
Sbjct: 88 QYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKG 147
Query: 278 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG 333
PG G GVG P +PG PG PG +G+PGA G G
Sbjct: 148 K-PGPQGYPGVGKPG--------------------MPGMPG-KPGAMGMPGAKGEIGQKG 185
Query: 334 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 389
+G+PG P P G+PG PG P + K G R G+ G P
Sbjct: 186 EIGPMGIPGPQGPPGPH-GLPGIGKPG--GPGLPGQPGPK----GDRGPKGLPG-PQGLR 237
Query: 390 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 449
G G GFG+ G PGV G PG+ G PG G+PGVG PGV
Sbjct: 238 GPKGDKGFGMP--GAPGVKGPPGMHGPPGPVGLPGVG------------------KPGVT 277
Query: 450 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 509
PG G APG G PGV PG+ PGIG G K
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGI---PGIGKPGQDGIPGQPGFPGGKG 334
Query: 510 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGA 568
+ G+PGL G+PG+ G PG G G G VPGAL + GA
Sbjct: 335 E--------QGLPGLPGPPGLPGI----GKPGFPGPKGDRGMGGVPGALGPRGEKGPIGA 382
Query: 569 ----------AVPGVLGGLGALGGVGIP-----GGVVG----AGPAAAAAAAKAAAKAAQ 609
+PG+ G +G G +G P GG+VG GP K
Sbjct: 383 PGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF 442
Query: 610 FGLVGAAGLGGL-----GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G VG G+ GL G G GV GL G+P K + G+ G P PG
Sbjct: 443 LGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPK-GEPGIPGDQGLQGPPGIPG 501
Score = 103 bits (258), Expect = 4e-22
Identities = 130/397 (32%), Positives = 154/397 (38%), Gaps = 69/397 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPA----LGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFP 78
P P G+PG G PG +P LG G P +P P G G G P + P
Sbjct: 262 PPGPVGLPGV---GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKP 318
Query: 79 GAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 137
G +PG + K GL G+PG GL P P G VPG P
Sbjct: 319 GQDGIPG-----QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGP 373
Query: 138 GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-------VGPFGGPQP 190
G + GA PG+G PG P G+ P G GA G PG VGP G P P
Sbjct: 374 RGEKGPI--GA--PGIGGPPGEPGLPGI-PGPMGPPGAI-GFPGPKGEGGIVGPQGPPGP 427
Query: 191 -GVP--LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAA 246
G P G+P K P G G P G LP GP G AG G G P G+ GP+
Sbjct: 428 KGEPGLQGFPGK-PGFLGEVGPPGMRG-LPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEP 485
Query: 247 AAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAA 301
+ G G+ G G PG+PG +PG G G+G P A
Sbjct: 486 GIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPG 545
Query: 302 KAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPGAGIPVVP---GAGIP--GAAV 354
K PG GP PG+ G PG PG P A +P P G +P G +
Sbjct: 546 K-----------PGALGPQGQPGLPGPPGP--PGPPGPPAVMPPTPPPQGEYLPDMGLGI 592
Query: 355 PGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 391
GV P A YGA+ G G P Y + A
Sbjct: 593 DGVKPPHA----------YGAKKGKNGG--PAYEMPA 617
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 149 bits (375), Expect = 1e-35
Identities = 165/503 (32%), Positives = 199/503 (39%), Gaps = 79/503 (15%)
Query: 121 QPGAGVKPGK--VPGVGLPGVY----PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 174
+PG PG +PG G+PG+ P G PG PG+ +PG P G+ PG G
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGY-PGVGKPGMPGMPGKPGAMGM----PGAKG 179
Query: 175 AFAGIPGVGPFGGPQPGVPLGYPIKAPKL--PGGYGLPYTTGKLPYG-YGPGGVAGAAGK 231
+GP G P P P G P P + PGG GLP G P G GP G+ G G
Sbjct: 180 EIGQKGEIGPMGIPGPQGPPG-PHGLPGIGKPGGPGLPGQPG--PKGDRGPKGLPGPQGL 236
Query: 232 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTP 291
G G G A PGV G PG+ G PG G+ GVG P
Sbjct: 237 RGPKGDKGFGMPGA-------------------PGVKGP--PGMHGP-PGPVGLPGVGKP 274
Query: 292 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA-GIPVVPG--AG 348
K GA P GP PGV G P G+PG+G PG GIP PG G
Sbjct: 275 GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP--GIPGIGKPGQDGIPGQPGFPGG 332
Query: 349 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPG 406
+PG+ P PG+G G P G GG PG +G G G
Sbjct: 333 KGEQGLPGLPGPPGL-------------PGIGKPGFPGPKGDRGMGGVPG-ALGPRGEKG 378
Query: 407 VAGVPGVGGVPGVGGVPGV--GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAP 464
G PG+GG PG G+PG+ + P + G+V G PG PG+ P
Sbjct: 379 PIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQG-PPGPKGEPGLQGFP 437
Query: 465 GVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG----A 519
G G PG+ PG +G G GV + K + G
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPP 497
Query: 520 GIPGLG---VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGG 576
GIPG+G +G PG+ G PGL G PG G PG A +G PG G
Sbjct: 498 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK-PGV-----AGLHGP--PGKPGA 549
Query: 577 LGALGGVGIPGGVVGAGPAAAAA 599
LG G G+PG GP A
Sbjct: 550 LGPQGQPGLPGPPGPPGPPGPPA 572
Score = 142 bits (358), Expect = 1e-33
Identities = 177/543 (32%), Positives = 215/543 (39%), Gaps = 96/543 (17%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLG 66
A P+ G + L S+ P G PG P G PG P G G KP P G G G
Sbjct: 103 AVPKKGKEIPLASLRGEQGPRGEPG--PRGPPGPPGLPGHGIPGIKGKPGPQGYPGVG-K 159
Query: 67 AGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAG 125
G+ P PGA+ +PG + K G G+PG G PG
Sbjct: 160 PGMPGMPGK--PGAMGMPGAKGEI-----GQKGEIGPMGIPGPQG----------PPG-- 200
Query: 126 VKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV-G 183
P +PG+G PG G LPG P G G+P G++ G G PGV G
Sbjct: 201 --PHGLPGIGKPG---GPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKG 255
Query: 184 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQ 243
P G P P+G P G G P TG P GP G GA G+ G P G P
Sbjct: 256 PPGMHGPPGPVGLP--------GVGKPGVTG-FPGPQGPLGKPGAPGEPG-PQGPIGVPG 305
Query: 244 AAAAAAAKAAAKFGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAK 302
K G PG GG G G+PG +PG G+ G+G P
Sbjct: 306 VQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPG-LPGPPGLPGIGKP--------GFP 356
Query: 303 AAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIPGAAVPGVV 358
K G VPG GP G +G PG G G PG G+P +PG G PGA G
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIG----GPPGEPGLPGIPGPMGPPGAI--GFP 410
Query: 359 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG-VG--- 414
P+ G + G+ G P G PGF +G G PG+ G+PG +G
Sbjct: 411 GPKGEGGIVGPQGPPGPKGEPGLQGFP-------GKPGF-LGEVGPPGMRGLPGPIGPKG 462
Query: 415 -----GVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLA 469
GVPG+ GVPG+ + P+ + G PG+ PG+G G PG+
Sbjct: 463 EAGQKGVPGLPGVPGL-LGPKGEPGIPGDQGLQG-PPGI---PGIGGPSGPIGPPGI--- 514
Query: 470 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 529
PG PG+ PG PGIG GVA K A G PGL G
Sbjct: 515 PGPKGEPGLPGPPGF---PGIGKPGVAGLHGPPGKPGALGP--------QGQPGLPGPPG 563
Query: 530 VPG 532
PG
Sbjct: 564 PPG 566
Score = 133 bits (335), Expect = 5e-31
Identities = 173/485 (35%), Positives = 208/485 (42%), Gaps = 80/485 (16%)
Query: 23 PSRPGGVPG-AIPG--GVPGGVFYPALG-PG--GKPLKPVPGGLAGAGLGAGL-GAFPAV 75
P P G+PG IPG G PG YP +G PG G P KP G+ GA G G +
Sbjct: 131 PPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPM 190
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGK----- 130
PG P G K G GL G PG G G PQ G K K
Sbjct: 191 GIPGPQGPPGPHGLPGIGKPG--GPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMP 248
Query: 131 -VPGV-GLPGVY--PGGV-LPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFA--GIPGVG 183
PGV G PG++ PG V LPG PGV PG P G KP APG G G+PGV
Sbjct: 249 GAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPG-PQGPLGKPGAPGEPGPQGPIGVPGVQ 307
Query: 184 PFGGPQPGVP-LGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV 240
GP PG+P +G P + +PG G P G+ LP GP G+ G GK G+P
Sbjct: 308 ---GP-PGIPGIGKPGQ-DGIPGQPGFPGGKGEQGLPGLPGPPGLPGI-GKPGFP----- 356
Query: 241 GPQAAAAAAAKAAAKFGAGAAGVL--PGVGGA-GVPGVPGAIPGIGGIAG-VGTPAAAAA 296
GP+ A G G + PG+GG G PG+PG IPG G G +G P
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPG-IPGPMGPPGAIGFPGPKGE 415
Query: 297 AAAAAKAAKYGAAA--GL--VPGGPGFGPGVVGVPGA-GVPG-VGVPG-AGIPVVPGAGI 349
G GL PG PGF G VG PG G+PG +G G AG VPG +
Sbjct: 416 GGIVGPQGPPGPKGEPGLQGFPGKPGF-LGEVGPPGMRGLPGPIGPKGEAGQKGVPG--L 472
Query: 350 PGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGIPTYGVGAGGFPGFGVGVGGIPGVA 408
PG VPG++ P+ G PG+ G+GG P+ +G G PG G G+PG
Sbjct: 473 PG--VPGLLGPKGEPGIPGDQGLQGP-PGIPGIGG-PSGPIGPPGIPG-PKGEPGLPGPP 527
Query: 409 GVPGVG-----------------------GVPGVGGVPGVGISPEAQAAAAAKAAKYGLV 445
G PG+G G+PG G PG P +Y
Sbjct: 528 GFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPD 587
Query: 446 PGVGV 450
G+G+
Sbjct: 588 MGLGI 592
Score = 133 bits (334), Expect = 6e-31
Identities = 174/523 (33%), Positives = 202/523 (38%), Gaps = 100/523 (19%)
Query: 142 GGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKA 200
G +P A G G P G P PG+ G GIPG+ GPQ GYP +
Sbjct: 108 GKEIPLASLRGEQGPRGEPGPRG-PPGPPGLPGH--GIPGIKGKPGPQ-----GYPGVGK 159
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGA 260
P +PG G P G +P G G G G G P GPQ G
Sbjct: 160 PGMPGMPGKPGAMG-MPGAKGEIGQKGEIGPMGIP-----GPQ-------------GPPG 200
Query: 261 AGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 319
LPG+G G PG+PG PG G G G P A V G PG
Sbjct: 201 PHGLPGIGKPGGPGLPGQ-PGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGM 259
Query: 320 G--PGVVGVPGAGVPGV-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGAR 376
PG VG+PG G PGV G PG P+ G PGA PG P+ G
Sbjct: 260 HGPPGPVGLPGVGKPGVTGFPGPQGPL----GKPGA--PGEPGPQGPIGVPGVQGPPGI- 312
Query: 377 PGVGV---GGIPTYGVGAGGFPGFG--VGVGGIPGVAGVPGVG--GVPGVGGVPGVGISP 429
PG+G GIP G GFPG G+ G+PG G+PG+G G PG G G+G P
Sbjct: 313 PGIGKPGQDGIP----GQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVP 368
Query: 430 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
A K +G APG+G PG PG+ PG PG PG G
Sbjct: 369 GALGPRGEKGP-------IG-APGIGGPPGEPGLPGI---PGPMGPPGAIGFPGPKGEGG 417
Query: 490 I-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGA 546
I GP G + GL G PG VG PG+ G+PG +G
Sbjct: 418 IVGPQGPPGP-------------KGEPGLQGFPGKPGFLGEVGPPGM---RGLPG-PIGP 460
Query: 547 -------GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA 599
GVPG VPG L PG+ G G G GIPG +GP
Sbjct: 461 KGEAGQKGVPGLPGVPGLLGPK-------GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPG 513
Query: 600 AAKAAAKAAQFGLVGAAGLGGLGVGGL----GVPGVGGLGGIP 638
+ G G G+G GV GL G PG G G P
Sbjct: 514 IPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQP 556
Score = 124 bits (310), Expect = 4e-28
Identities = 163/540 (30%), Positives = 198/540 (36%), Gaps = 109/540 (20%)
Query: 164 GVKPKAPGVGGAFAG-IPGVGPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLP 217
G+KP P + IP P G P +PL A P L G P+ LP
Sbjct: 32 GIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPH----LP 87
Query: 218 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 277
A GK P P A+ + G PG+ G G+PG+ G
Sbjct: 88 QYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKG 147
Query: 278 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG 333
PG G GVG P +PG PG PG +G+PGA G G
Sbjct: 148 K-PGPQGYPGVGKPG--------------------MPGMPG-KPGAMGMPGAKGEIGQKG 185
Query: 334 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 389
+G+PG P P G+PG PG P + K G R G+ G P
Sbjct: 186 EIGPMGIPGPQGPPGPH-GLPGIGKPG--GPGLPGQPGPK----GDRGPKGLPG-PQGLR 237
Query: 390 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 449
G G GFG+ G PGV G PG+ G PG G+PGVG PGV
Sbjct: 238 GPKGDKGFGMP--GAPGVKGPPGMHGPPGPVGLPGVG------------------KPGVT 277
Query: 450 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 509
PG G APG G PGV PG+ PGIG G K
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGI---PGIGKPGQDGIPGQPGFPGGKG 334
Query: 510 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGA 568
+ G+PGL G+PG+ G PG G G G VPGAL + GA
Sbjct: 335 E--------QGLPGLPGPPGLPGI----GKPGFPGPKGDRGMGGVPGALGPRGEKGPIGA 382
Query: 569 ----------AVPGVLGGLGALGGVGIP-----GGVVG----AGPAAAAAAAKAAAKAAQ 609
+PG+ G +G G +G P GG+VG GP K
Sbjct: 383 PGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF 442
Query: 610 FGLVGAAGLGGL-----GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G VG G+ GL G G GV GL G+P K + G+ G P PG
Sbjct: 443 LGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPK-GEPGIPGDQGLQGPPGIPG 501
Score = 103 bits (258), Expect = 4e-22
Identities = 130/397 (32%), Positives = 154/397 (38%), Gaps = 69/397 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPA----LGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFP 78
P P G+PG G PG +P LG G P +P P G G G P + P
Sbjct: 262 PPGPVGLPGV---GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKP 318
Query: 79 GAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 137
G +PG + K GL G+PG GL P P G VPG P
Sbjct: 319 GQDGIPG-----QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGP 373
Query: 138 GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-------VGPFGGPQP 190
G + GA PG+G PG P G+ P G GA G PG VGP G P P
Sbjct: 374 RGEKGPI--GA--PGIGGPPGEPGLPGI-PGPMGPPGAI-GFPGPKGEGGIVGPQGPPGP 427
Query: 191 -GVP--LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAA 246
G P G+P K P G G P G LP GP G AG G G P G+ GP+
Sbjct: 428 KGEPGLQGFPGK-PGFLGEVGPPGMRG-LPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEP 485
Query: 247 AAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAA 301
+ G G+ G G PG+PG +PG G G+G P A
Sbjct: 486 GIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPG 545
Query: 302 KAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPGAGIPVVP---GAGIP--GAAV 354
K PG GP PG+ G PG PG P A +P P G +P G +
Sbjct: 546 K-----------PGALGPQGQPGLPGPPGP--PGPPGPPAVMPPTPPPQGEYLPDMGLGI 592
Query: 355 PGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 391
GV P A YGA+ G G P Y + A
Sbjct: 593 DGVKPPHA----------YGAKKGKNGG--PAYEMPA 617
>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
sapiens]
Length = 1691
Score = 147 bits (372), Expect = 2e-35
Identities = 203/693 (29%), Positives = 258/693 (37%), Gaps = 91/693 (13%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGA-GLGAGLGAFPAVTFPG 79
P PG G PG P G+PG GP G P GL G GL G PG
Sbjct: 604 PGLPGEKGHPG--PPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPG 661
Query: 80 ALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGV 139
+ P G + K GL G PG G S G +PG+ PG V LPG
Sbjct: 662 SYGPSGFP-GTPGFPGPKGSRGLPGTPGQPGSSGSKG----EPGS---PGLVHLPELPG- 712
Query: 140 YPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIK 199
PG R G LPG P G K PG+ G+ G+PG G G G
Sbjct: 713 -----FPGPR--GEKGLPGFP-GLPGKDGLPGMIGS-PGLPGSKGATGDIFGAENG---- 759
Query: 200 APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGA 258
PG GL TG + G G+ G G G P G G + + +
Sbjct: 760 ---APGEQGLQGLTGHKGF-LGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTP 815
Query: 259 GAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGP 317
G++G G +G+PG PG PGI G G GT + K G +PG P
Sbjct: 816 GSSGPYGIKGKSGLPGAPG-FPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKG--LPGNP 872
Query: 318 GF--------GPGVVGVPGAGVPG--------VGVPGA-GIPVVPGA-GIPGAAVPGVVS 359
G PGV G+P P VG PG G+P +PG G+ G +PG
Sbjct: 873 GLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKG--IPGSTG 930
Query: 360 PEAAAKAAAKAAKYGARPGVGVGGIPTY-----------------GVGAGGFPGFGVGVG 402
+ A + G R G GIP+ G+ GFPG
Sbjct: 931 KMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPG----PR 986
Query: 403 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 462
G G AG PG G+PG G+PG+ + GL PG+ + G+ PG+
Sbjct: 987 GDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL-PGLKGSSGITGFPGM-- 1043
Query: 463 APGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GI 521
PG + G+ +PG+ PG PG+ G + + K Q + G G
Sbjct: 1044 -PGESGSQGIRGSPGL---PGASGLPGL-KGDNGQTVEISGSPGPKGQPGESGFKGTKGR 1098
Query: 522 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 581
GL +G PG G G+ G+PG PG A + G +PG G GA+G
Sbjct: 1099 DGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV--AGMRGEPG--LPGSSGHQGAIG 1154
Query: 582 GVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-LGVPGVGGLGGIPPA 640
+G PG + G G G G GV G G+PG G G P
Sbjct: 1155 PLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGI 1214
Query: 641 AAAKAAKYGVAARPGFGLSPIFPGGACLGKACG 673
K G+ + G P G A L A G
Sbjct: 1215 GIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPG 1247
Score = 139 bits (351), Expect = 7e-33
Identities = 201/694 (28%), Positives = 266/694 (38%), Gaps = 114/694 (16%)
Query: 28 GVPGAIPGGVPG--GVFYPALGPGGKPLKPVPG-----GLAGAGLGAGL-GAFPAVTFPG 79
G+PG P G G GV P G K PG G+ G GL G + G
Sbjct: 297 GLPG--PRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDG 354
Query: 80 ALVPGGVADAAAAYKAAKAG-------AGLGGVPGVGGLGVSAGAVVPQPGAGVK----- 127
A++ G D G G GVPG+ L GA+ PQ G+K
Sbjct: 355 AVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGN 414
Query: 128 PGK-------VPGV-GLPGVY--PGGVLPG----------ARFPGVGVLPGVPTGAGVK- 166
PG+ +PG GLPG PG P + FPG+ G G+K
Sbjct: 415 PGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKG 474
Query: 167 -PKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK-----LPYGY 220
G G+P GP G P P P G I P L G G + G P
Sbjct: 475 IKGDSGFCACDGGVPNTGPPGEPGPPGPWGL-IGLPGLKGARGDRGSGGAQGPAGAPGLV 533
Query: 221 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 280
GP G +G GK G P + + Q + ++ G GV+ G GVPG+PG +P
Sbjct: 534 GPLGPSGPKGKKGEPILSTI--QGMPGDRGDSGSQ---GFRGVIGEPGKDGVPGLPG-LP 587
Query: 281 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG----PGVVGVPGA----GVP 332
G+ G G G P + G PG PG G PG G+PG G+P
Sbjct: 588 GLPGDGGQGFPGEKGLPGLPGEKGHPGP-----PGLPGNGLPGLPGPRGLPGDKGKDGLP 642
Query: 333 GV-GVPGA-GIP---VVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGG 383
G G+PG+ GI ++PG+ G PG PG P+ + + G+ G G
Sbjct: 643 GQQGLPGSKGITLPCIIPGSYGPSGFPGT--PGFPGPKGSRGLPGTPGQPGSSGSKGEPG 700
Query: 384 IP--TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAK 441
P + GFPG G G+PG G+PG G+PG+ G PG+ P ++ A
Sbjct: 701 SPGLVHLPELPGFPG-PRGEKGLPGFPGLPGKDGLPGMIGSPGL---PGSKGATGDIFGA 756
Query: 442 YGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKS 501
PG G+ G G+ GV PG+ G +PG PG V
Sbjct: 757 ENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGSPGT-PGQVGQPGTP 815
Query: 502 AAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAA 561
+ + ++ G PG+ G G G PG V G+PG +PG
Sbjct: 816 GSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGN---- 871
Query: 562 KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL 621
PG++G G+ G G+ G +GP + G VG G+ GL
Sbjct: 872 ---------PGLVGLKGSPGSPGVAGLPALSGP---------KGEKGSVGFVGFPGIPGL 913
Query: 622 GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 655
G+PG GL GI P + K G A PG
Sbjct: 914 P----GIPGTRGLKGI-PGSTGKMGPSGRAGTPG 942
Score = 132 bits (332), Expect = 1e-30
Identities = 209/738 (28%), Positives = 269/738 (36%), Gaps = 140/738 (18%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGL 60
+ GL +PG +L P G PG PG V P G P P G+
Sbjct: 781 LPGLKGVHGKPG-------LLGPKGERGSPGT-----PGQVGQP-----GTPGSSGPYGI 823
Query: 61 AGAGLGAGLGAFPAVT-FPGALVPGGVADAAAAY--KAAKAGAGLGGVPGVGGLGVSAGA 117
G G FP ++ PG G + K GL G PG+ GL S G+
Sbjct: 824 KGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGS 883
Query: 118 --VVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGA 175
V P G+ VG G FPG+ LPG+P G+K PG G
Sbjct: 884 PGVAGLPALSGPKGEKGSVGFVG-----------FPGIPGLPGIPGTRGLKG-IPGSTGK 931
Query: 176 F-----AGIPGV-------GPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYGYGP 222
AG PG GP G P P P+ +K K G G + G P G
Sbjct: 932 MGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDK--GSQGSAGSNG-FPGPRGD 988
Query: 223 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGV-GGAGVPGVPGAIPG 281
G AG G G P G+ P + K G G LPG+ G +G+ G PG +PG
Sbjct: 989 KGEAGRPGPPGLPGAPGL-PGIIKGVSGKPGPPGFMGIRG-LPGLKGSSGITGFPG-MPG 1045
Query: 282 IGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLV--------PGGPGFGP--------GVV 324
G G+ G+P A+ G + PG GF G +
Sbjct: 1046 ESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIGNI 1105
Query: 325 GVPG-------AGVPG-VGVPGA-GIPVVPGA----GIPGAA----------VPGVVSPE 361
G PG GV G VG+PGA G P V G G+PG++ PG++ P+
Sbjct: 1106 GFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSPGLIGPK 1165
Query: 362 AAAKAAAKAAKYG--------ARPGVGVGGIPTYG-----VGAGGFPGFGVGVGGIPGV- 407
G PG + G+P G G+PG G+G G PG+
Sbjct: 1166 GFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLR 1225
Query: 408 -----AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 462
G PG+ G G+ G PG+ + P A + GL G PG PG
Sbjct: 1226 GQKGDRGFPGLQGPAGLPGAPGISL-PSLIAGQPGDPGRPGL-DGERGRPGPAGPPG--- 1280
Query: 463 APGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGI 521
PG G PG PG+ G G G+ + ++ K +R G G
Sbjct: 1281 PPGPSSNQGDTGDPGF---PGIPGPKGPKGDQGIPGFSGLPGELGLKG-MRGEPGF-MGT 1335
Query: 522 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 581
PG VG PG G PG+ AG G + G A+ PG LG G G
Sbjct: 1336 PG---KVGPPG---DPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQVPPGPLGLPGIDG 1389
Query: 582 GVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGIP- 638
G+ G GP + G+ G G GL G LG PG+ GL G P
Sbjct: 1390 IPGLTGDPGAQGPVGLQGSKGLP------GIPGKDGPSGLPGPPGALGDPGLPGLQGPPG 1443
Query: 639 -PAAAAKAAKYGVAARPG 655
A + +G+ PG
Sbjct: 1444 FEGAPGQQGPFGMPGMPG 1461
Score = 130 bits (328), Expect = 3e-30
Identities = 207/697 (29%), Positives = 254/697 (36%), Gaps = 93/697 (13%)
Query: 20 ILHPSRPGGVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFP 78
I P G PGA+ P G PG GP G P P G G G G V P
Sbjct: 182 ITGPQGAPGFPGAVGPAGPPG-----LQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLP 236
Query: 79 GALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAGAVVPQPGAGVKPGKVPGVGLP 137
G P K G G PG G G+S P G + G+ G+P
Sbjct: 237 GPAGPPPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGEKGIP 296
Query: 138 GVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKA--PGVGGAFAGIPGV-GPFGGPQPGVP 193
G LPG R P G + G P G K PG+ G F GI G G G P P V
Sbjct: 297 G------LPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNG-FQGIEGQKGDIGLPGPDVF 349
Query: 194 L---GYPIKA-PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV----GPQAA 245
+ G I P PG GLP G G G+ G +G G P +GV GPQ
Sbjct: 350 IDIDGAVISGNPGDPGVPGLPGLKGD----EGIQGLRGPSGVPGLPALSGVPGALGPQGF 405
Query: 246 AAAAAKAA--AKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAK 302
+ GAAG LPG G G PG PG + + +
Sbjct: 406 PGLKGDQGNPGRTTIGAAG-LPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQ 464
Query: 303 AAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV-GVPGA----GIPVVPGA-------GIP 350
K + G GF GVP G PG G PG G+P + GA G
Sbjct: 465 GPKGNLGLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQ 524
Query: 351 G-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAG 409
G A PG+V P + K + G+ G G G GF GV G PG G
Sbjct: 525 GPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPG----DRGDSGSQGFR-GVIGEPGKDG 579
Query: 410 VPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA--PGVGVAPGVG 467
VPG+ G+PG+ G G G E + PG+ PG G+ PG PG
Sbjct: 580 VPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGL---PGNGLPGLPGPRGLPGDK 636
Query: 468 LAPGVGVAPGVGVAPGVG---VAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 523
G+ G+ + G+ + PG GP G + R G G PG
Sbjct: 637 GKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGS----RGLPGT-PGQPG 691
Query: 524 LGVGVGVPG------LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL 577
G PG L G PG G+PGF +PG +PG++G
Sbjct: 692 SSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGK----------DGLPGMIGSP 741
Query: 578 GALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGG----LGVPGVG 632
G G G G + GA A + G +G +GL GL GV G LG G
Sbjct: 742 GLPGSKGATGDIFGAENGAPGEQGLQGLTGHK-GFLGDSGLPGLKGVHGKPGLLGPKGER 800
Query: 633 GLGGIP-----PAAAAKAAKYGVAARPGFGLSPIFPG 664
G G P P + YG+ + G +P FPG
Sbjct: 801 GSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPG 837
Score = 123 bits (309), Expect = 5e-28
Identities = 203/715 (28%), Positives = 257/715 (35%), Gaps = 138/715 (19%)
Query: 43 YPALGPGGKPLKPV----PGGLAGAGLGAGLGAFPAVT-FPGALVPGGVADAAAAYKAAK 97
+P G G+P P+ P G G GL FPG L P G K K
Sbjct: 43 FPEKGARGRP-GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGP-------KGDK 94
Query: 98 AGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGV 155
G+ G G+ G+ G P+ PG G VG PG P G +PG+
Sbjct: 95 GPMGVPGFLGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPG--PDG------YPGLLG 146
Query: 156 LPGVPTGAGVKPKAPGVGGAF------AGIPGVGPFGGPQ--PGVPLGY-PIKAPKLPGG 206
PG+P G K G+F G+PG+ GPQ PG P P P L G
Sbjct: 147 PPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGP 206
Query: 207 YGLP---YTTGKLPYGY----GPGGVAGAAGKAGYPTGTG----VG-PQAAAAAAAKAAA 254
G P G + G+ G G G G AG P TG +G P+ + +
Sbjct: 207 PGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGP 266
Query: 255 KFGAGAAGV--LPGVGGAGVPGVPG--AIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAA 309
K G +G PG+G G G G IPG+ G G +G+ K G
Sbjct: 267 KGFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLG-- 324
Query: 310 AGLVPGGPGFGPGVVGVPG-AGVPG----VGVPGAGIPVVPG-AGIPGAAVPGVVSPEAA 363
PG GF G+ G G G+PG + + GA I PG G+PG +PG+ E
Sbjct: 325 ---FPGLNGF-QGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPG--LPGLKGDEGI 378
Query: 364 AKAAAKAAKYGARPGVGVGGIPTY-----GVGAGGFPGF----------GVGVGGIPGVA 408
G R GV G+P +G GFPG +G G+PG
Sbjct: 379 ---------QGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRD 429
Query: 409 GVPGVGGVPG--------------VGGVPGVGISPEAQAAAAAKAAK--------YGLVP 446
G+PG G PG G PG+ + K K G VP
Sbjct: 430 GLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVP 489
Query: 447 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGP-GGVAAAAKSAAK 504
G PG PG G+ G G G A G APG +GP G K
Sbjct: 490 NTG-PPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEP 548
Query: 505 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 564
+ + Q G+PG G G G PG G+PG +PG
Sbjct: 549 ILSTIQ---------GMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPG 599
Query: 565 KYGAAVPGVLGGLGALGGVGIPG-GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGL---- 618
+ G +PG+ G G G G+PG G+ G GP Q GL G+ G+
Sbjct: 600 EKG--LPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPC 657
Query: 619 ---GGLGVGGL----GVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 664
G G G G PG G G+P P + G PG P PG
Sbjct: 658 IIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPG 712
Score = 92.8 bits (229), Expect = 9e-19
Identities = 155/530 (29%), Positives = 195/530 (36%), Gaps = 89/530 (16%)
Query: 183 GPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYG----YGPGGVAGAAGKAGYPT 236
GP G P P G+ L G G P G PYG GP GV G G G P
Sbjct: 53 GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLG--PYGPKGDKGPMGVPGFLGINGIPG 110
Query: 237 GTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GTPA 292
G GP+ G G VG G G PG + PG+ G G G P
Sbjct: 111 HPGQPGPRGPPGLD---------GCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
Query: 293 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGA--GI 349
A + K G PG PG+ G+ G G PG PGA P P G
Sbjct: 162 LAPGSFKGMK------------GDPGL-PGLDGITGPQGAPGF--PGAVGPAGPPGLQGP 206
Query: 350 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGV 407
PG PG + P+ + K G + VG+ G P G F GF G G G
Sbjct: 207 PGP--PGPLGPDGNMGLGFQGEK-GVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGE 263
Query: 408 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 467
G G G+ G G PG+G + E + + G +PG+ G + GV PG
Sbjct: 264 PGPKGFPGISGPPGFPGLGTTGEK-----GEKGEKG-IPGLPGPRGPMGSEGVQGPPGQQ 317
Query: 468 LAPGVGVAPGVGVAPGV-GVAPGIG-PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 525
G PG+ G+ G IG PG A ++ GL PGL
Sbjct: 318 GKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGL----PGLK 373
Query: 526 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 585
G+ GL +GVPGL +GVPG P K + G +G G G G+
Sbjct: 374 GDEGIQGLRGPSGVPGLPALSGVPG-ALGPQGFPGLKGDQ-GNPGRTTIGAAGLPGRDGL 431
Query: 586 PGGVVGAGPAAAAAAAKAA-AKAAQF-GLVGAAG-LGGLGVGGL---------------- 626
PG GP + + K + F GL G G G LG+ G+
Sbjct: 432 PGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNT 491
Query: 627 ------GVPGVGGLGGIPPAAAAKAAK-----YGVAARPGFGLSPIFPGG 665
G PG GL G+P A+ + G A PG + P+ P G
Sbjct: 492 GPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGL-VGPLGPSG 540
>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
sapiens]
Length = 1690
Score = 147 bits (372), Expect = 2e-35
Identities = 203/693 (29%), Positives = 258/693 (37%), Gaps = 91/693 (13%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGA-GLGAGLGAFPAVTFPG 79
P PG G PG P G+PG GP G P GL G GL G PG
Sbjct: 603 PGLPGEKGHPG--PPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPG 660
Query: 80 ALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGV 139
+ P G + K GL G PG G S G +PG+ PG V LPG
Sbjct: 661 SYGPSGFP-GTPGFPGPKGSRGLPGTPGQPGSSGSKG----EPGS---PGLVHLPELPG- 711
Query: 140 YPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIK 199
PG R G LPG P G K PG+ G+ G+PG G G G
Sbjct: 712 -----FPGPR--GEKGLPGFP-GLPGKDGLPGMIGS-PGLPGSKGATGDIFGAENG---- 758
Query: 200 APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGA 258
PG GL TG + G G+ G G G P G G + + +
Sbjct: 759 ---APGEQGLQGLTGHKGF-LGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTP 814
Query: 259 GAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGP 317
G++G G +G+PG PG PGI G G GT + K G +PG P
Sbjct: 815 GSSGPYGIKGKSGLPGAPG-FPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKG--LPGNP 871
Query: 318 GF--------GPGVVGVPGAGVPG--------VGVPGA-GIPVVPGA-GIPGAAVPGVVS 359
G PGV G+P P VG PG G+P +PG G+ G +PG
Sbjct: 872 GLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKG--IPGSTG 929
Query: 360 PEAAAKAAAKAAKYGARPGVGVGGIPTY-----------------GVGAGGFPGFGVGVG 402
+ A + G R G GIP+ G+ GFPG
Sbjct: 930 KMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPG----PR 985
Query: 403 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 462
G G AG PG G+PG G+PG+ + GL PG+ + G+ PG+
Sbjct: 986 GDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL-PGLKGSSGITGFPGM-- 1042
Query: 463 APGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GI 521
PG + G+ +PG+ PG PG+ G + + K Q + G G
Sbjct: 1043 -PGESGSQGIRGSPGL---PGASGLPGL-KGDNGQTVEISGSPGPKGQPGESGFKGTKGR 1097
Query: 522 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 581
GL +G PG G G+ G+PG PG A + G +PG G GA+G
Sbjct: 1098 DGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV--AGMRGEPG--LPGSSGHQGAIG 1153
Query: 582 GVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-LGVPGVGGLGGIPPA 640
+G PG + G G G G GV G G+PG G G P
Sbjct: 1154 PLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGI 1213
Query: 641 AAAKAAKYGVAARPGFGLSPIFPGGACLGKACG 673
K G+ + G P G A L A G
Sbjct: 1214 GIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPG 1246
Score = 139 bits (351), Expect = 7e-33
Identities = 201/694 (28%), Positives = 266/694 (38%), Gaps = 114/694 (16%)
Query: 28 GVPGAIPGGVPG--GVFYPALGPGGKPLKPVPG-----GLAGAGLGAGL-GAFPAVTFPG 79
G+PG P G G GV P G K PG G+ G GL G + G
Sbjct: 296 GLPG--PRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDG 353
Query: 80 ALVPGGVADAAAAYKAAKAG-------AGLGGVPGVGGLGVSAGAVVPQPGAGVK----- 127
A++ G D G G GVPG+ L GA+ PQ G+K
Sbjct: 354 AVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGN 413
Query: 128 PGK-------VPGV-GLPGVY--PGGVLPG----------ARFPGVGVLPGVPTGAGVK- 166
PG+ +PG GLPG PG P + FPG+ G G+K
Sbjct: 414 PGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKG 473
Query: 167 -PKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK-----LPYGY 220
G G+P GP G P P P G I P L G G + G P
Sbjct: 474 IKGDSGFCACDGGVPNTGPPGEPGPPGPWGL-IGLPGLKGARGDRGSGGAQGPAGAPGLV 532
Query: 221 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 280
GP G +G GK G P + + Q + ++ G GV+ G GVPG+PG +P
Sbjct: 533 GPLGPSGPKGKKGEPILSTI--QGMPGDRGDSGSQ---GFRGVIGEPGKDGVPGLPG-LP 586
Query: 281 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG----PGVVGVPGA----GVP 332
G+ G G G P + G PG PG G PG G+PG G+P
Sbjct: 587 GLPGDGGQGFPGEKGLPGLPGEKGHPGP-----PGLPGNGLPGLPGPRGLPGDKGKDGLP 641
Query: 333 GV-GVPGA-GIP---VVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGG 383
G G+PG+ GI ++PG+ G PG PG P+ + + G+ G G
Sbjct: 642 GQQGLPGSKGITLPCIIPGSYGPSGFPGT--PGFPGPKGSRGLPGTPGQPGSSGSKGEPG 699
Query: 384 IP--TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAK 441
P + GFPG G G+PG G+PG G+PG+ G PG+ P ++ A
Sbjct: 700 SPGLVHLPELPGFPG-PRGEKGLPGFPGLPGKDGLPGMIGSPGL---PGSKGATGDIFGA 755
Query: 442 YGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKS 501
PG G+ G G+ GV PG+ G +PG PG V
Sbjct: 756 ENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGSPGT-PGQVGQPGTP 814
Query: 502 AAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAA 561
+ + ++ G PG+ G G G PG V G+PG +PG
Sbjct: 815 GSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGN---- 870
Query: 562 KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL 621
PG++G G+ G G+ G +GP + G VG G+ GL
Sbjct: 871 ---------PGLVGLKGSPGSPGVAGLPALSGP---------KGEKGSVGFVGFPGIPGL 912
Query: 622 GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 655
G+PG GL GI P + K G A PG
Sbjct: 913 P----GIPGTRGLKGI-PGSTGKMGPSGRAGTPG 941
Score = 132 bits (332), Expect = 1e-30
Identities = 209/738 (28%), Positives = 269/738 (36%), Gaps = 140/738 (18%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGL 60
+ GL +PG +L P G PG PG V P G P P G+
Sbjct: 780 LPGLKGVHGKPG-------LLGPKGERGSPGT-----PGQVGQP-----GTPGSSGPYGI 822
Query: 61 AGAGLGAGLGAFPAVT-FPGALVPGGVADAAAAY--KAAKAGAGLGGVPGVGGLGVSAGA 117
G G FP ++ PG G + K GL G PG+ GL S G+
Sbjct: 823 KGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGS 882
Query: 118 --VVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGA 175
V P G+ VG G FPG+ LPG+P G+K PG G
Sbjct: 883 PGVAGLPALSGPKGEKGSVGFVG-----------FPGIPGLPGIPGTRGLKG-IPGSTGK 930
Query: 176 F-----AGIPGV-------GPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYGYGP 222
AG PG GP G P P P+ +K K G G + G P G
Sbjct: 931 MGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDK--GSQGSAGSNG-FPGPRGD 987
Query: 223 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGV-GGAGVPGVPGAIPG 281
G AG G G P G+ P + K G G LPG+ G +G+ G PG +PG
Sbjct: 988 KGEAGRPGPPGLPGAPGL-PGIIKGVSGKPGPPGFMGIRG-LPGLKGSSGITGFPG-MPG 1044
Query: 282 IGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLV--------PGGPGFGP--------GVV 324
G G+ G+P A+ G + PG GF G +
Sbjct: 1045 ESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIGNI 1104
Query: 325 GVPG-------AGVPG-VGVPGA-GIPVVPGA----GIPGAA----------VPGVVSPE 361
G PG GV G VG+PGA G P V G G+PG++ PG++ P+
Sbjct: 1105 GFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSPGLIGPK 1164
Query: 362 AAAKAAAKAAKYG--------ARPGVGVGGIPTYG-----VGAGGFPGFGVGVGGIPGV- 407
G PG + G+P G G+PG G+G G PG+
Sbjct: 1165 GFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLR 1224
Query: 408 -----AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 462
G PG+ G G+ G PG+ + P A + GL G PG PG
Sbjct: 1225 GQKGDRGFPGLQGPAGLPGAPGISL-PSLIAGQPGDPGRPGL-DGERGRPGPAGPPG--- 1279
Query: 463 APGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGI 521
PG G PG PG+ G G G+ + ++ K +R G G
Sbjct: 1280 PPGPSSNQGDTGDPGF---PGIPGPKGPKGDQGIPGFSGLPGELGLKG-MRGEPGF-MGT 1334
Query: 522 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 581
PG VG PG G PG+ AG G + G A+ PG LG G G
Sbjct: 1335 PG---KVGPPG---DPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQVPPGPLGLPGIDG 1388
Query: 582 GVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGIP- 638
G+ G GP + G+ G G GL G LG PG+ GL G P
Sbjct: 1389 IPGLTGDPGAQGPVGLQGSKGLP------GIPGKDGPSGLPGPPGALGDPGLPGLQGPPG 1442
Query: 639 -PAAAAKAAKYGVAARPG 655
A + +G+ PG
Sbjct: 1443 FEGAPGQQGPFGMPGMPG 1460
Score = 130 bits (328), Expect = 3e-30
Identities = 207/697 (29%), Positives = 254/697 (36%), Gaps = 93/697 (13%)
Query: 20 ILHPSRPGGVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFP 78
I P G PGA+ P G PG GP G P P G G G G V P
Sbjct: 181 ITGPQGAPGFPGAVGPAGPPG-----LQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLP 235
Query: 79 GALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAGAVVPQPGAGVKPGKVPGVGLP 137
G P K G G PG G G+S P G + G+ G+P
Sbjct: 236 GPAGPPPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGEKGIP 295
Query: 138 GVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKA--PGVGGAFAGIPGV-GPFGGPQPGVP 193
G LPG R P G + G P G K PG+ G F GI G G G P P V
Sbjct: 296 G------LPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNG-FQGIEGQKGDIGLPGPDVF 348
Query: 194 L---GYPIKA-PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV----GPQAA 245
+ G I P PG GLP G G G+ G +G G P +GV GPQ
Sbjct: 349 IDIDGAVISGNPGDPGVPGLPGLKGD----EGIQGLRGPSGVPGLPALSGVPGALGPQGF 404
Query: 246 AAAAAKAA--AKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAK 302
+ GAAG LPG G G PG PG + + +
Sbjct: 405 PGLKGDQGNPGRTTIGAAG-LPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQ 463
Query: 303 AAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV-GVPGA----GIPVVPGA-------GIP 350
K + G GF GVP G PG G PG G+P + GA G
Sbjct: 464 GPKGNLGLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQ 523
Query: 351 G-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAG 409
G A PG+V P + K + G+ G G G GF GV G PG G
Sbjct: 524 GPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPG----DRGDSGSQGFR-GVIGEPGKDG 578
Query: 410 VPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA--PGVGVAPGVG 467
VPG+ G+PG+ G G G E + PG+ PG G+ PG PG
Sbjct: 579 VPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGL---PGNGLPGLPGPRGLPGDK 635
Query: 468 LAPGVGVAPGVGVAPGVG---VAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 523
G+ G+ + G+ + PG GP G + R G G PG
Sbjct: 636 GKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGS----RGLPGT-PGQPG 690
Query: 524 LGVGVGVPG------LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL 577
G PG L G PG G+PGF +PG +PG++G
Sbjct: 691 SSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGK----------DGLPGMIGSP 740
Query: 578 GALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGG----LGVPGVG 632
G G G G + GA A + G +G +GL GL GV G LG G
Sbjct: 741 GLPGSKGATGDIFGAENGAPGEQGLQGLTGHK-GFLGDSGLPGLKGVHGKPGLLGPKGER 799
Query: 633 GLGGIP-----PAAAAKAAKYGVAARPGFGLSPIFPG 664
G G P P + YG+ + G +P FPG
Sbjct: 800 GSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPG 836
Score = 123 bits (309), Expect = 5e-28
Identities = 203/715 (28%), Positives = 257/715 (35%), Gaps = 138/715 (19%)
Query: 43 YPALGPGGKPLKPV----PGGLAGAGLGAGLGAFPAVT-FPGALVPGGVADAAAAYKAAK 97
+P G G+P P+ P G G GL FPG L P G K K
Sbjct: 42 FPEKGARGRP-GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGP-------KGDK 93
Query: 98 AGAGLGGVPGVGGLGVSAGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGV 155
G+ G G+ G+ G P+ PG G VG PG P G +PG+
Sbjct: 94 GPMGVPGFLGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPG--PDG------YPGLLG 145
Query: 156 LPGVPTGAGVKPKAPGVGGAF------AGIPGVGPFGGPQ--PGVPLGY-PIKAPKLPGG 206
PG+P G K G+F G+PG+ GPQ PG P P P L G
Sbjct: 146 PPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGP 205
Query: 207 YGLP---YTTGKLPYGY----GPGGVAGAAGKAGYPTGTG----VG-PQAAAAAAAKAAA 254
G P G + G+ G G G G AG P TG +G P+ + +
Sbjct: 206 PGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGP 265
Query: 255 KFGAGAAGV--LPGVGGAGVPGVPG--AIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAA 309
K G +G PG+G G G G IPG+ G G +G+ K G
Sbjct: 266 KGFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLG-- 323
Query: 310 AGLVPGGPGFGPGVVGVPG-AGVPG----VGVPGAGIPVVPG-AGIPGAAVPGVVSPEAA 363
PG GF G+ G G G+PG + + GA I PG G+PG +PG+ E
Sbjct: 324 ---FPGLNGF-QGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPG--LPGLKGDEGI 377
Query: 364 AKAAAKAAKYGARPGVGVGGIPTY-----GVGAGGFPGF----------GVGVGGIPGVA 408
G R GV G+P +G GFPG +G G+PG
Sbjct: 378 ---------QGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRD 428
Query: 409 GVPGVGGVPG--------------VGGVPGVGISPEAQAAAAAKAAK--------YGLVP 446
G+PG G PG G PG+ + K K G VP
Sbjct: 429 GLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVP 488
Query: 447 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGP-GGVAAAAKSAAK 504
G PG PG G+ G G G A G APG +GP G K
Sbjct: 489 NTG-PPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEP 547
Query: 505 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 564
+ + Q G+PG G G G PG G+PG +PG
Sbjct: 548 ILSTIQ---------GMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPG 598
Query: 565 KYGAAVPGVLGGLGALGGVGIPG-GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGL---- 618
+ G +PG+ G G G G+PG G+ G GP Q GL G+ G+
Sbjct: 599 EKG--LPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPC 656
Query: 619 ---GGLGVGGL----GVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 664
G G G G PG G G+P P + G PG P PG
Sbjct: 657 IIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPG 711
Score = 92.8 bits (229), Expect = 9e-19
Identities = 155/530 (29%), Positives = 195/530 (36%), Gaps = 89/530 (16%)
Query: 183 GPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYG----YGPGGVAGAAGKAGYPT 236
GP G P P G+ L G G P G PYG GP GV G G G P
Sbjct: 52 GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLG--PYGPKGDKGPMGVPGFLGINGIPG 109
Query: 237 GTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GTPA 292
G GP+ G G VG G G PG + PG+ G G G P
Sbjct: 110 HPGQPGPRGPPGLD---------GCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
Query: 293 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGA--GI 349
A + K G PG PG+ G+ G G PG PGA P P G
Sbjct: 161 LAPGSFKGMK------------GDPGL-PGLDGITGPQGAPGF--PGAVGPAGPPGLQGP 205
Query: 350 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGV 407
PG PG + P+ + K G + VG+ G P G F GF G G G
Sbjct: 206 PGP--PGPLGPDGNMGLGFQGEK-GVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGE 262
Query: 408 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 467
G G G+ G G PG+G + E + + G +PG+ G + GV PG
Sbjct: 263 PGPKGFPGISGPPGFPGLGTTGEK-----GEKGEKG-IPGLPGPRGPMGSEGVQGPPGQQ 316
Query: 468 LAPGVGVAPGVGVAPGV-GVAPGIG-PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 525
G PG+ G+ G IG PG A ++ GL PGL
Sbjct: 317 GKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGL----PGLK 372
Query: 526 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 585
G+ GL +GVPGL +GVPG P K + G +G G G G+
Sbjct: 373 GDEGIQGLRGPSGVPGLPALSGVPG-ALGPQGFPGLKGDQ-GNPGRTTIGAAGLPGRDGL 430
Query: 586 PGGVVGAGPAAAAAAAKAA-AKAAQF-GLVGAAG-LGGLGVGGL---------------- 626
PG GP + + K + F GL G G G LG+ G+
Sbjct: 431 PGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNT 490
Query: 627 ------GVPGVGGLGGIPPAAAAKAAK-----YGVAARPGFGLSPIFPGG 665
G PG GL G+P A+ + G A PG + P+ P G
Sbjct: 491 GPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGL-VGPLGPSG 539
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 144 bits (362), Expect = 3e-34
Identities = 232/769 (30%), Positives = 277/769 (36%), Gaps = 157/769 (20%)
Query: 23 PSRPG-----GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGA-GLGA-------- 67
P R G G PG + G+PG V GP G P P P G GA GL
Sbjct: 541 PGRDGSKGMRGEPGELGEPGLPGEV--GMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTR 598
Query: 68 ------GLGAFPA----VTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGA 117
GL FP G P GVA + K G G PGV G V
Sbjct: 599 GEKGERGLDGFPGKPGDTGQQGRPGPSGVAGP----QGEKGDVGPAGPPGVPGSVVQQEG 654
Query: 118 VVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPK-----APG 171
+ + GA PG G PG PGAR P G G P G++ K PG
Sbjct: 655 LKGEQGA---PGPRGHQGAPGP------PGARGPIGPEGRDGPPGLQGLRGKKGDMGPPG 705
Query: 172 VGGAFA-----GIPGV-GPFG-GPQPGVP--LGYPIKAPKLPGGYGLPYTTGK--LPYGY 220
+ G G PGV GP G G PG+P +G+P K P PG G P G P
Sbjct: 706 IPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGK-PGPPGPTGPPGKDGPNGPPGPP 764
Query: 221 GPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGV--LPGV---------- 267
G G G G+ G P G+ G A + K AG G PGV
Sbjct: 765 GTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEK 824
Query: 268 GGAGVPGV-----------PGAIPGIGGIAGVGTPAAAAAAAAAAKAAK----------- 305
G G+PG+ P PG+ G + TP K K
Sbjct: 825 GELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGL 884
Query: 306 YGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPG-AGIPG-AAVPGVVSPEA 362
G L P GP PG G GA G PG AG P PG G PG + PG V
Sbjct: 885 QGRPGELGPQGPTGPPGAKGQEGAHGAPG----AAGNPGAPGHVGAPGPSGPPGSVGAPG 940
Query: 363 AAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVG--GVPGVG 420
K + G + G G P VG G P G PG+ G PG G G PG+
Sbjct: 941 LRGTPGKDGERGEKGAAGEEGSPG-PVGPRGDP-------GAPGLPGPPGKGKDGEPGLR 992
Query: 421 GVPGVGISPEAQAAAAAK-------AAKYGLVPGVGVAPGVGVAPGVGVAPGVGLA--PG 471
G PG+ P AA K A V G APG+ +PG PG+G+A PG
Sbjct: 993 GSPGLP-GPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPG 1051
Query: 472 VGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAK--VAAKAQLRAAAGLG------- 518
PG +PG PG GP G A + + K L + G
Sbjct: 1052 PSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAK 1111
Query: 519 -------------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 565
G+PG GVPG G G AG PG PG +A + ++
Sbjct: 1112 DVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPG-IAGPQGSQ 1170
Query: 566 YGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL----GGL 621
G +G G G G+PG + G A A A G+ G+ G G
Sbjct: 1171 GERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQ 1230
Query: 622 GVGGL-GVPGVGGLGGI-----PPAAAAKAAKYGVAARPGFGLSPIFPG 664
G GL G+PG G G PP KA + G+ G P F G
Sbjct: 1231 GPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKG 1279
Score = 120 bits (300), Expect = 5e-27
Identities = 203/705 (28%), Positives = 240/705 (34%), Gaps = 135/705 (19%)
Query: 22 HPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL 81
+P PG V P G PG V P L G P K G GA G PG +
Sbjct: 917 NPGAPGHVGAPGPSGPPGSVGAPGL--RGTPGKDGERGEKGAAGEEG--------SPGPV 966
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQP-GAGVKPGKVPGVGLPGVY 140
P G D A G G G PG+ G S G +P P G GKV G
Sbjct: 967 GPRG--DPGAPGLPGPPGKGKDGEPGLRG---SPG--LPGPLGTKAACGKVRG------S 1013
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKA 200
L G G PG+P G + G PG+G G P P P
Sbjct: 1014 ENCALGGQCVKGDRGAPGIPGSPGSR-----------GDPGIGVAGPPGPSGP------- 1055
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG----------VGPQAAAAAAA 250
PG G P + G LP GP G AG G G P G + P A
Sbjct: 1056 ---PGDKGSPGSRG-LPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAK 1111
Query: 251 KAAAKFGAGAAGV--LPGV-GGAGVPGVPG-----------AIPGIGGIAGVGTPAAAAA 296
G G+ LPG G GVPG PG PG+ G G+ P +
Sbjct: 1112 DVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQG 1171
Query: 297 AAAAAKAAKYGAAAGLVPGGPGF--GPGVVGVPGA-GVPGVGVPGAGIPVVPG-AGIPG- 351
A G PG PGF PG G PGA G+ G P GI PG G PG
Sbjct: 1172 ERGADGEVGQKGDQG-HPGVPGFMGPPGNPGPPGADGIAGAAGP-PGIQGSPGKEGPPGP 1229
Query: 352 ---AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF--GVGVGGIPG 406
+ +PG+ E K G G G+P GA G PGF G G PG
Sbjct: 1230 QGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPG-PEGARGPPGFKGHTGDSGAPG 1288
Query: 407 VAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGV 466
G G G+PG G+PG + + PG +PG PG PG
Sbjct: 1289 PRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRG--PPGKNGSPGSPGEPGPSGTPGQ 1346
Query: 467 GLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGV 526
+ G +PG+ G PG PG K V K G PG
Sbjct: 1347 KGSKGENGSPGLPGFLGPRGPPG-EPGEKGVPGKEG--VPGK----------PGEPGFKG 1393
Query: 527 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 586
G PG+ G PG G G PG +PG +PG G +G G G P
Sbjct: 1394 ERGDPGIKGDKGPPG---GKGQPGDPGIPGH-KGHTGLMGPQGLPGENGPVGPPGPPGQP 1449
Query: 587 G--GVVGAGPA------------------------AAAAAAKAAAKAAQFGLVGAAGLGG 620
G G+ G P+ A A + + G G G G
Sbjct: 1450 GFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDG 1509
Query: 621 L--GVGGLGVPGVGGLGGI-----PPAAAAKAAKYGVAARPGFGL 658
L G +G PG G GG+ P + G PG GL
Sbjct: 1510 LPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGL 1554
Score = 110 bits (274), Expect = 6e-24
Identities = 202/700 (28%), Positives = 233/700 (33%), Gaps = 111/700 (15%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGV 86
G PG + P G PG P GP GK PG GL LG A G + G
Sbjct: 961 GSPGPVGPRGDPGAPGLP--GPPGKGKDGEPGLRGSPGLPGPLGTKAAC---GKV--RGS 1013
Query: 87 ADAAAAYKAAKAGAGLGGVPGVGGLGVSAG-AVVPQPGAGVKPGKVPGVGLPGVYPGGVL 145
+ A + K G G+PG G G V PG PG G G L
Sbjct: 1014 ENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRG------L 1067
Query: 146 PGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQP----------GVPLG 195
PG FPG P P G P PG G G PG+ P P G
Sbjct: 1068 PG--FPG----PQGPAGRDGAPGNPGERGP-PGKPGLSSLLSPGDINLLAKDVCNDCPPG 1120
Query: 196 YPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAK 255
P P LPG G GK P G G G AG G P G+ + A +
Sbjct: 1121 PP-GLPGLPGFKGDKGVPGK-PGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGE 1178
Query: 256 FGAGAAGVLPGVGG-AGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL-- 312
G PGV G G PG PG PG GIAG P + +GL
Sbjct: 1179 VGQKGDQGHPGVPGFMGPPGNPGP-PGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPG 1237
Query: 313 VPG-----------GPGFGPGVVGVPGA-------GVPGV-------GVPG----AGIPV 343
+PG GP PG G PG G PG G PG +G
Sbjct: 1238 IPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMG 1297
Query: 344 VPGA-GIPG----AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG-----G 393
+PG G+PG G P+ K G+ G G P G G
Sbjct: 1298 LPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPG 1357
Query: 394 FPGF--GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL-VPGVGV 450
PGF G G PG GVPG GVPG G PG K G PG
Sbjct: 1358 LPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPG 1417
Query: 451 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 510
PG G+ G+ G PG PG G P ++ + +
Sbjct: 1418 IPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLE 1477
Query: 511 LRAAAGLG-------------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGA 557
R A L G PG G+PG G PG G+ G + P
Sbjct: 1478 TRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEG-PSGPIG 1536
Query: 558 LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 617
+ AK PGV G G +G GIPG G A+ GL G G
Sbjct: 1537 PKGERGAKGDPGAPGV-GLRGEMGPPGIPGQPGEPG-------------YAKDGLPGIPG 1582
Query: 618 LGGLGVGGLGVPGVGGLGGIPPAAAAKAAKY--GVAARPG 655
G G G PG+ G G P Y +AARPG
Sbjct: 1583 PQG-ETGPAGHPGLPGPPGPPGQCDPSQCAYFASLAARPG 1621
Score = 107 bits (268), Expect = 3e-23
Identities = 185/649 (28%), Positives = 224/649 (34%), Gaps = 116/649 (17%)
Query: 28 GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL--VPGG 85
G PG IPG PG P +G G P P G G+ GL FP P PG
Sbjct: 1028 GAPG-IPGS-PGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGN 1085
Query: 86 VADAAAAYKAAKAGA-------------------GLGGVPGVGGLGVSAGAVVPQPGAGV 126
+ K + G G+PG+ G G V +PG
Sbjct: 1086 PGERGPPGKPGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKG-VPGKPGREG 1144
Query: 127 KPGKVPGVGLPGVY--PGGVLP----GAR-------------FPGVGVLPGVPTGAGVKP 167
GK G PG+ PG P G R PGV G P G P
Sbjct: 1145 TEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPG-PP 1203
Query: 168 KAPGVGGAFAGIPGV----GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPG 223
A G+ GA AG PG+ G G P P P G P +PG G GK GP
Sbjct: 1204 GADGIAGA-AGPPGIQGSPGKEGPPGPQGPSGLP----GIPGEEGKEGRDGKP----GPP 1254
Query: 224 GVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIG 283
G G AG+ G P GP+ A +GA G G G+PG G +PG
Sbjct: 1255 GEPGKAGEPGLP-----GPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEG-LPGKD 1308
Query: 284 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----------GVPG 333
G G P K G+ PG PG PG G PG G+PG
Sbjct: 1309 GDTGPTGPQGPQGPRGPP--GKNGS-----PGSPG-EPGPSGTPGQKGSKGENGSPGLPG 1360
Query: 334 V----GVPGA-GIPVVPGA-GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 386
G PG G VPG G+PG PG G + G GIP
Sbjct: 1361 FLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIP- 1419
Query: 387 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEAQAAAAAKAAKYGLV 445
G G G +G G+PG G G G PG G PG+ G SP + + G
Sbjct: 1420 ---GHKGHTGL-MGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQ 1475
Query: 446 PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAK 504
+A + P + G PG PG PG G G G +
Sbjct: 1476 LETRLAYLLAQMPPAYMKSSQG-RPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGP 1534
Query: 505 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 564
+ K + A GA GL +G PG+ G PG G+PG
Sbjct: 1535 IGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKD-GLPG-------------- 1579
Query: 565 KYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLV 613
+PG G G G G+PG G + A A+ AA+ G V
Sbjct: 1580 -----IPGPQGETGPAGHPGLPGPPGPPGQCDPSQCAYFASLAARPGNV 1623
Score = 105 bits (261), Expect = 2e-22
Identities = 158/548 (28%), Positives = 182/548 (33%), Gaps = 102/548 (18%)
Query: 205 GGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGA-----G 259
G GLP G + G G GA G G G+GP K + G
Sbjct: 490 GPMGLPGPKGDI----GAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDG 545
Query: 260 AAGVLPGVGGAGVPGVPGAI--------PGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA 310
+ G+ G G PG+PG + PG+ G G VG P + G
Sbjct: 546 SKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGEKGER- 604
Query: 311 GL--VPGGPGFG-----PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAA 363
GL PG PG PG GV G V AG P VPG+ + + G
Sbjct: 605 GLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGP 664
Query: 364 AKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGG 421
GAR +G G P G G G +G GIPG+ G+ G G PGV G
Sbjct: 665 RGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKG-DMGPPGIPGLLGLQGPPGPPGVPG 723
Query: 422 VPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA 481
PG G SP PG PG PG G PG PG
Sbjct: 724 PPGPGGSPGLPGEIG--------FPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPGERGE 775
Query: 482 PGVGVAPG----IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA--------------GIPG 523
G+ PG IG G+A +A L A G G+PG
Sbjct: 776 DGLPGKPGLRGEIGEQGLAGRPGE----KGEAGLPGAPGFPGVRGEKGDQGEKGELGLPG 831
Query: 524 LGVGVGVPGLGVGAGVPGL-GVGA------------------------GVPGFGAVPGAL 558
L G G AG PGL G + G PG PG L
Sbjct: 832 LKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGEL 891
Query: 559 A--------AAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 610
AK + PG G GA G VG PG G A K +
Sbjct: 892 GPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGER 951
Query: 611 GLVGAAGLGGL--GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACL 668
G GAAG G VG G PG GL G PP G PG SP PG
Sbjct: 952 GEKGAAGEEGSPGPVGPRGDPGAPGLPG-PPGK-------GKDGEPGLRGSPGLPGPLGT 1003
Query: 669 GKACGRKR 676
ACG+ R
Sbjct: 1004 KAACGKVR 1011
Score = 84.0 bits (206), Expect = 4e-16
Identities = 137/462 (29%), Positives = 165/462 (35%), Gaps = 77/462 (16%)
Query: 261 AGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAA----AAAAAAKAAKYGAAAGL-VPG 315
AG +G AG G+PG IG I VG P + G L +PG
Sbjct: 480 AGEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPG 539
Query: 316 GPG--FGPGVVGVPG----AGVPG-VGVPG----AGIPVVPG-AGIPG------------ 351
PG G+ G PG G+PG VG+ G G+P PG G PG
Sbjct: 540 PPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRG 599
Query: 352 ----------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGV 401
PG + + A G + VG G P G PG V
Sbjct: 600 EKGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPP-------GVPGSVVQQ 652
Query: 402 GGIPGVAGVPGVGGVPGVGGVPGV--GISPEAQAAAAAKAAKYGL--------VPGVGVA 451
G+ G G PG G G G PG I PE + G +PG+
Sbjct: 653 EGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGL 712
Query: 452 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQ 510
G PGV PG G +PG+ PG PG PG GP G K +
Sbjct: 713 QGPPGPPGVPGPPGPGGSPGL---PGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGE 769
Query: 511 --LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--AAKAAKY 566
R GL G PGL +G GL AG PG AG+PG PG + K
Sbjct: 770 PGERGEDGL-PGKPGLRGEIGEQGL---AGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKG 825
Query: 567 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGG 625
+PG+ G G G G P G G P + + G G G GL G G
Sbjct: 826 ELGLPGLKGDRGEKGEAG-PAGPPGL-PGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPG 883
Query: 626 L-GVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIFPG 664
L G PG G G PP A + +G PG +P PG
Sbjct: 884 LQGRPGELGPQGPTGPPGAKGQEGAHGA---PGAAGNPGAPG 922
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 143 bits (361), Expect = 5e-34
Identities = 167/524 (31%), Positives = 200/524 (38%), Gaps = 38/524 (7%)
Query: 117 AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAF 176
AV + G PG G PG PG PG+ PG+P G P A G G
Sbjct: 54 AVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPG--PSAVGKPGV- 110
Query: 177 AGIPGV----GPFGGPQPGVPLGYPIKAPK-LPGGYGLPYTTG-KLPYGYGPGGVAGAAG 230
G+PG GP+G P G P P+ PG G+P G +P G G GA G
Sbjct: 111 PGLPGKPGERGPYGPKGDVGPAGLP--GPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPG 168
Query: 231 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT 290
G+P G P K +GA G+ G P P PG+G G
Sbjct: 169 PRGFPGEKG-APGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGV 227
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPG-VGVPGAGIPVVPGA-G 348
P + G + P GP PG G G G PG G PG P +PG G
Sbjct: 228 PGQPGIKGDRGFPGEMGP---IGPPGPQGPPGERGPEGIGKPGAAGAPGQ--PGIPGTKG 282
Query: 349 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVA 408
+PGA PG+ P K G + G G+P G GA G G G+ G PG+
Sbjct: 283 LPGA--PGIAGP-PGPPGFGKPGLPGLKGERGPAGLPG-GPGAKGEQG-PAGLPGKPGLT 337
Query: 409 GVPGVGGVPGVGGVPGV-GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 467
G PG G G G+PG G+ A A Y G +PG PG PG+
Sbjct: 338 GPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLD 397
Query: 468 LAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGV 526
G PG PGVG PG+ GP G A AK +A R A GIPG
Sbjct: 398 GPKGNPGLPGPKGDPGVGGPPGLPGPVG-PAGAKGMPGHNGEAGPRGA----PGIPGTRG 452
Query: 527 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPG-ALAAAKAAKYGAAVPGVLGGLGALGGVGI 585
+G P G+PG G PG PG A A K PG G G G G+
Sbjct: 453 PIGPP------GIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGL 506
Query: 586 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 629
PG GP A + KA Q + L G G+P
Sbjct: 507 PGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMP 550
Score = 123 bits (308), Expect = 6e-28
Identities = 161/530 (30%), Positives = 192/530 (36%), Gaps = 110/530 (20%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
P+ P G PG P G PG Y + G G+P P P G + G G+ P PG
Sbjct: 67 PAGPRGHPG--PSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGK-PGVPGLPGK--PGERG 121
Query: 83 PGGVAD--AAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVY 140
P G A + G G+PG G+ V PG KPG+ G PG
Sbjct: 122 PYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISV--------PG---KPGQQGPTGAPG-- 168
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVKPK----APGVGGAFAGIPG----VGPFGGP---- 188
P G FPG PGVP G K + APG G G+PG GP G P
Sbjct: 169 PRG------FPGEKGAPGVPGMNGQKGEMGYGAPGRPGE-RGLPGPQGPTGPSGPPGVGK 221
Query: 189 --------QPGVP--LGYPIKAPKL--PGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPT 236
QPG+ G+P + + PG G P G P G G G AGA G+ G P
Sbjct: 222 RGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERG--PEGIGKPGAAGAPGQPGIPG 279
Query: 237 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 296
G+ P A A PG G G+PG+ G G G G
Sbjct: 280 TKGL-PGAPGIAGPPGP-----------PGFGKPGLPGLKGERGPAGLPGGPGAKGEQGP 327
Query: 297 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----------AGVPGV----GVPGA--- 339
A K G + P GP PG G+PG AG PG G PG+
Sbjct: 328 AGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGK 387
Query: 340 -GIPVVPG-------AGIPG-------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI 384
G P PG G+PG PG+ P A A G G GI
Sbjct: 388 PGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGI 447
Query: 385 P-TYG-VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442
P T G +G G PGF PG G PG G PG G+ G++ +
Sbjct: 448 PGTRGPIGPPGIPGF-------PGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGH 500
Query: 443 GLVPGVGVAPGVGVAPGVGVAP----GVGLAPGVGVAPGVGVAPGVGVAP 488
PG+ PG PG V P G P + P V GV P
Sbjct: 501 SGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMP 550
Score = 111 bits (277), Expect = 2e-24
Identities = 148/482 (30%), Positives = 176/482 (36%), Gaps = 86/482 (17%)
Query: 183 GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGY----GPGGVAGAAGKAGYPTGT 238
G F + +P G P + +PYT G G G AG G+P
Sbjct: 18 GVFYAERYQMPTGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHP--- 74
Query: 239 GVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAA 298
GP +G G PG G G+ G PG +PG G + VG P
Sbjct: 75 --GP---------------SGPPGK-PGYGSPGLQGEPG-LPGPPGPSAVGKPGVPGLPG 115
Query: 299 AAAKAAKYGAAAGLVPGG---PGFGPGVVGVPG-AGVPGVGVPGAGIPV-VPGA-GIPGA 352
+ YG + P G P PG G+PG AG+ G PG P PG G PG
Sbjct: 116 KPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGE 175
Query: 353 -AVPGVVSPEAAAKAAAKAAKYGA--RPGV-GVGGIPTYGVGAGGFPGFGV-GVGGIPGV 407
PGV YGA RPG G+ G P G G PG G G G+PG
Sbjct: 176 KGAPGVPGMNGQKGEMG----YGAPGRPGERGLPG-PQGPTGPSGPPGVGKRGENGVPGQ 230
Query: 408 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 467
G+ G G PG G G P Q + + G+G PG APG PG
Sbjct: 231 PGIKGDRGFPGEMGPIG---PPGPQGPPGERGPE-----GIG-KPGAAGAPGQPGIPGTK 281
Query: 468 LAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVG 527
PG APG+ PG PG G G+ L+ G AG+PG G
Sbjct: 282 GLPG---APGIAGPPG---PPGFGKPGLPG-------------LKGERG-PAGLPG---G 318
Query: 528 VGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--AAKAAKYGAAVPGVLGGLGALGGVGI 585
G G AG+PG PG PG + K +PG G G G G
Sbjct: 319 PGAKGEQGPAGLPGK------PGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGY 372
Query: 586 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 645
PG G + K GL G G GL G G PGVGG G+P
Sbjct: 373 PGAKGERGSPGSDGKPGYPGKP---GLDGPKGNPGLP-GPKGDPGVGGPPGLPGPVGPAG 428
Query: 646 AK 647
AK
Sbjct: 429 AK 430
Score = 70.1 bits (170), Expect = 6e-12
Identities = 93/301 (30%), Positives = 110/301 (36%), Gaps = 67/301 (22%)
Query: 400 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 459
G G PG G G G PG G PG YG PG+ PG+ PG
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPG--------------KPGYG-SPGLQGEPGLPGPPG 101
Query: 460 VGVA--PGVGLAPG-------------VGVA--PGVGVAPGVGVAPGI-GPGGVAAAAKS 501
PGV PG VG A PG PG PGI GP G++ K
Sbjct: 102 PSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPG---PPGIPGPAGISVPGKP 158
Query: 502 AAK--VAAKAQLRAAAGLGA-GIPGLG-----VGVGVPGLGVGAGVPGL--------GVG 545
+ A GA G+PG+ +G G PG G+PG G
Sbjct: 159 GQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPG 218
Query: 546 AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGAGPAAAAAAAKA 603
G G VPG K PG +G +G G G PG G G G AA A
Sbjct: 219 VGKRGENGVPG----QPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQ 274
Query: 604 AAKAAQFGLVGAAGLGG-LGVGGLGVPGVGGL------GGIP--PAAAAKAAKYGVAARP 654
GL GA G+ G G G G PG+ GL G+P P A + G+ +P
Sbjct: 275 PGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKP 334
Query: 655 G 655
G
Sbjct: 335 G 335
Score = 48.5 bits (114), Expect = 2e-05
Identities = 66/226 (29%), Positives = 77/226 (34%), Gaps = 45/226 (19%)
Query: 445 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAA 503
V G PG G PG PG PG G +PG+ PG+ GP G +A K
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPG---KPGYG-SPGLQGEPGLPGPPGPSAVGKPGV 110
Query: 504 KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKA 563
G+PG G G G GL G PG +PG +
Sbjct: 111 P---------------GLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVP 155
Query: 564 AKYGAAVPGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 618
K PG G GA G G PG GV G A + + GL G G
Sbjct: 156 GK-----PGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQG- 209
Query: 619 GGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G G PGVG K + GV +PG FPG
Sbjct: 210 ---PTGPSGPPGVG-----------KRGENGVPGQPGIKGDRGFPG 241
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 139 bits (351), Expect = 7e-33
Identities = 213/673 (31%), Positives = 249/673 (36%), Gaps = 106/673 (15%)
Query: 26 PGGVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPG 84
P G PG P G PG V G G P P G AG +GL P T P PG
Sbjct: 2163 PEGKPGLQGPRGPPGPV--GGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGP----PG 2216
Query: 85 -GVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPG- 142
G+ A GL G PG GL V PQ G+ PG+V G PG PG
Sbjct: 2217 RGLTGPTGA-------VGLPGPPGPSGL------VGPQGSPGL-PGQVGETGKPGA-PGR 2261
Query: 143 ----GVLPGARFPGVGVLPGVPTGAGVK--PKAPGVGG-AFAGIPGVGPFGGPQPGVPLG 195
G PGV PG+P G K P G G A G+PG G PG G
Sbjct: 2262 DGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGA-PGGLAG 2320
Query: 196 YPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAK 255
+ P G GLP GP G G AG+AG P G Q A
Sbjct: 2321 DLVGEPGAKGDRGLP----------GPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGD 2370
Query: 256 FGAGAAGVL-----PGV-GGAGVPGVPGAIPGIGGIAG-------VGTPAAAAAAAAAAK 302
G G G PGV G G+PG+PGA PG+ G G +G P + A
Sbjct: 2371 PGVGVPGSPGPPGPPGVKGDLGLPGLPGA-PGVVGFPGQTGPRGEMGQPGPSGERGLAGP 2429
Query: 303 AAKYGAAAGLVPGGPGFGPGVVGVPGA-------GVPGVGVPGA----GIPVVPGA-GIP 350
+ G L P GP PG VG PGA G PGVG+PG G P + G G P
Sbjct: 2430 PGREGIPGPLGPPGP---PGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRP 2486
Query: 351 GAAVP-GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAG 409
G P G+ P + + G+ G G +G G P G G G G
Sbjct: 2487 GQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPG-PRGAKGDMGERGPRG 2545
Query: 410 VPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLA 469
+ G G G G PG + GL PG+ G PG PG +
Sbjct: 2546 LDGDKGPRGDNGDPG----DKGSKGEPGDKGSAGL-PGLRGLLGPQGQPGAAGIPGDPGS 2600
Query: 470 PGVGVAPGV-GVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA--GIPGLGV 526
PG PG+ G VG +GP G+ + ++ A GL G G
Sbjct: 2601 PGKDGVPGIRGEKGDVGF---MGPRGLKG----------ERGVKGACGLDGEKGDKGEAG 2647
Query: 527 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPG--ALAAAKAAKYGAAVPGVLGGLGALGGVG 584
G PGL AG G GVPG PG L K + PG G G G G
Sbjct: 2648 PPGRPGL---AGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERG 2704
Query: 585 IPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPG--VGGLGGIPPAAA 642
PG GP+ +A G G GL G G G PG V G G+P A
Sbjct: 2705 TPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQG-QKGERGPPGERVVGAPGVPGAPG 2763
Query: 643 AKAAKYGVAARPG 655
+ G RPG
Sbjct: 2764 ER----GEQGRPG 2772
Score = 134 bits (336), Expect = 4e-31
Identities = 214/684 (31%), Positives = 252/684 (36%), Gaps = 134/684 (19%)
Query: 28 GVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVA 87
G PG P G PG ALG G P P GLAG G+ P GGV
Sbjct: 2009 GDPG--PQGPPG----LALGERGPP---GPSGLAGEPGKPGIPGLPGRA-------GGVG 2052
Query: 88 DAAAAYKAAKAGA-------GLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVY 140
+A + + G G G PG+ G PG PG V PG
Sbjct: 2053 EAGRPGERGERGEKGERGEQGRDGPPGLPGT----------PGPPGPPGPKVSVDEPG-- 2100
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFA--GIPGV-GPFGGPQPGVPLGYP 197
PG L G + P PG+ GA +P + G G G+PG+ G G P P G P
Sbjct: 2101 PG--LSGEQGP-----PGLK-GAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNP 2152
Query: 198 IKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV----GPQAAAAAAAK 251
LPG G+ GK L GP G G G G P G+ GPQ + +
Sbjct: 2153 ----GLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGE 2208
Query: 252 AAAKFGAGAAGVLPGVGGAGVPGVPG--------AIPGIGGIAG-VGTPAAAAAAAAAAK 302
+ G G+ G G+PG PG PG+ G G G P A A+ K
Sbjct: 2209 PG-ETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGK 2267
Query: 303 AAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG---VGVPGA-GIPVVPG------AG 348
G+ VPG PG PG VG G G PG VG+PGA G PG G
Sbjct: 2268 DGDRGSPG--VPGSPGL-PGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVG 2324
Query: 349 IPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF-GVGVGGIPG 406
PGA G+ P A +A + G G G P G GF G GVGV G PG
Sbjct: 2325 EPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAP----GPKGFKGDPGVGVPGSPG 2380
Query: 407 VAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGV 466
G PGV G G+ G+PG PGV PG G PG
Sbjct: 2381 PPGPPGVKGDLGLPGLPG--------------------APGVVGFPGQTGPRGEMGQPGP 2420
Query: 467 GLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGV 526
G+ PG PG PG PG V S K G G+PG
Sbjct: 2421 SGERGLAGPPGREGIPGPLGPPG-PPGSVGPPGASGLK-------GDKGDPGVGLPGPRG 2472
Query: 527 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPG--------ALAAAKAAKYGAAV----PGVL 574
G PG+ G PG G+ G G A K K +AV PG
Sbjct: 2473 ERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPR 2532
Query: 575 GGLGALGGVGIPGGVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGG 633
G G +G G P G+ G GP + G G+AGL GL G LG G G
Sbjct: 2533 GAKGDMGERG-PRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLR-GLLGPQGQPG 2590
Query: 634 LGGIP--PAAAAKAAKYGVAARPG 655
GIP P + K G+ G
Sbjct: 2591 AAGIPGDPGSPGKDGVPGIRGEKG 2614
Score = 130 bits (326), Expect = 5e-30
Identities = 215/720 (29%), Positives = 255/720 (35%), Gaps = 141/720 (19%)
Query: 23 PSRPGGVPG--AIPG--GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFP 78
PS G PG IPG G GGV G G+P + G G G P + P
Sbjct: 2029 PSGLAGEPGKPGIPGLPGRAGGV-----GEAGRPGERGERGEKGERGEQGRDGPPGL--P 2081
Query: 79 GALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPG 138
G PG + G GL G G GL + G +PG+ G G+PG
Sbjct: 2082 GT--PGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKG----EPGSNGDQGPKGDRGVPG 2135
Query: 139 VYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGP-QPGVPLG 195
+ PG R G LPG AG + K PG+ G G PG VG G P PG P
Sbjct: 2136 IKGDRGEPGPRGQDGNPGLPGERGMAGPEGK-PGLQGP-RGPPGPVGGHGDPGPPGAPGL 2193
Query: 196 YPIKAPKLPGGY-GLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAA------AA 247
P+ P G G P TG P G G G GA G G P +G VGPQ +
Sbjct: 2194 AGPAGPQGPSGLKGEPGETG--PPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVG 2251
Query: 248 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG----VGTPAAAAAAAAAAKA 303
K A GA+G G GVPG PG +PG G G G P A AK
Sbjct: 2252 ETGKPGAPGRDGASGKDGDRGSPGVPGSPG-LPGPVGPKGEPGPTGAPGQAVVGLPGAKG 2310
Query: 304 AKYGAAAGLV------------------------------PGGPGFGPGVVGVPGA---- 329
K GA GL PG PG G G PG
Sbjct: 2311 EK-GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG-EDGQKGAPGPKGFK 2368
Query: 330 GVPGVGVPGA-GIPVVPGA-------GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV 381
G PGVGVPG+ G P PG G+PGA PGVV + + G G+
Sbjct: 2369 GDPGVGVPGSPGPPGPPGVKGDLGLPGLPGA--PGVVGFPGQTGPRGEMGQPGPSGERGL 2426
Query: 382 GGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGI-SPEAQAAAAAKAA 440
G P G G PG +G G PG G PG G+ G G PGVG+ P +
Sbjct: 2427 AGPP----GREGIPG-PLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRG 2481
Query: 441 KYGLVPGVGVAPGVGVAPGV-------GVAPGVGLAPGVGVAPGVGVAPGVGVAPGI--- 490
+ G PG G+ PG G GL G + + PG A G
Sbjct: 2482 EDGR-PGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGE 2540
Query: 491 -GPGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIPGLGVGVGVPGLGVGAGVPGLGVG 545
GP G+ + G AG+PGL +G G AG+PG
Sbjct: 2541 RGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPG---D 2597
Query: 546 AGVPGFGAVPG--------------ALAAAKAAKYGAAV---------------PGVLGG 576
G PG VPG L + K + PG+ G
Sbjct: 2598 PGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGH 2657
Query: 577 LGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGG 636
G +G G+PG G Q G G G G G PG+GG G
Sbjct: 2658 KGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQG----EKGERGTPGIGGFPG 2713
Score = 122 bits (306), Expect = 1e-27
Identities = 207/734 (28%), Positives = 255/734 (34%), Gaps = 138/734 (18%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPA-LGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTF---- 77
P+ P G G P G+ P GP G P P GL G G P
Sbjct: 1561 PAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGR 1620
Query: 78 ---PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGV 134
PG + P G D K + G G+PG G GA PG G+
Sbjct: 1621 PGPPGPVGPRG-RDGEVGEKGDEGPPGDPGLPGKAGERGLRGA----PGVRGPVGEKGDQ 1675
Query: 135 GLPGVYPGGVLPGARFP----GVGVLPGVP-----TGAGVKPKA---------------- 169
G PG PG+ P G PG P TG G + K
Sbjct: 1676 GDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGD 1735
Query: 170 PGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPK-------LPGGYGLPYTTGKLPYGYG 221
PG+ GA G G+ F GP PG P G P ++ P PG G GK P G
Sbjct: 1736 PGLPGA-PGERGIEGFRGP-PG-PQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK-PGAAG 1791
Query: 222 PGGVAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVP 276
P G GAAGKAG P G+ G Q + G G PG+ G G PG P
Sbjct: 1792 PSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK-PGLNGKNGEPGDP 1850
Query: 277 GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV-- 334
G G G A+ + GA L P GP PG VG PG G PGV
Sbjct: 1851 GED---GRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPG 1907
Query: 335 -----------------GVPG-AGIPVVPG-----------AGIPGAAVPGVVS------ 359
G+PG G+ PG AGI +A+ +V
Sbjct: 1908 GTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESS 1967
Query: 360 ------PEAAAKAAAKAAKYGARPGVGVGGIP--------TYGVGAGGFPGFGVGVGGIP 405
PE + + G G G P G G PG +G G P
Sbjct: 1968 GSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPP 2027
Query: 406 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 465
G +G+ G G PG+ G+PG +A +A + G G G G PG
Sbjct: 2028 GPSGLAGEPGKPGIPGLPG-------RAGGVGEAGRPG-ERGERGEKGERGEQGRDGPPG 2079
Query: 466 VGLAPGVGVAPGVGVA---PGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIP 522
+ PG PG V+ PG G++ GP G+ A + G+P
Sbjct: 2080 LPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKG-----DRGVP 2134
Query: 523 GLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 582
G+ G PG G PGL G+ G PG PG +GG G G
Sbjct: 2135 GIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGP-------RGPPGPVGGHGDPGP 2187
Query: 583 VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL-GVPGVGGLGGIPPAA 641
G PG AGPA + + + G G G G GL G PG GL G P +
Sbjct: 2188 PGAPG---LAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVG-PQGS 2243
Query: 642 AAKAAKYGVAARPG 655
+ G +PG
Sbjct: 2244 PGLPGQVGETGKPG 2257
Score = 121 bits (303), Expect = 2e-27
Identities = 205/663 (30%), Positives = 237/663 (35%), Gaps = 113/663 (17%)
Query: 44 PALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLG 103
P P G+ +P GL G G P T GA P G +A A K + G
Sbjct: 1248 PVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRT--GAPGPQGPPGSATA-KGERGFPGAD 1304
Query: 104 GVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGA 163
G PG G + G PGA PG GLPG P G PG R P G
Sbjct: 1305 GRPGSPGRAGNPGT----PGA---PGLKGSPGLPG--PRGD-PGERGP---------RGP 1345
Query: 164 GVKPKAPG--VGGAFAGIPG----VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL- 216
+P APG +GG G+PG GP G P P PLG P P+ P G LP T K
Sbjct: 1346 KGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDP--GPRGPPG--LPGTAMKGD 1401
Query: 217 --------PYGYGPGGVA-GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGA--GAAGVLP 265
P G G GG+A G G G P G PQ K K + GA G LP
Sbjct: 1402 KGDRGERGPPGPGEGGIAPGEPGLPGLPGSPG--PQGPVGPPGKKGEKGDSEDGAPG-LP 1458
Query: 266 G----------------VGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAA 309
G +G G G PG + G G P A + A + GA
Sbjct: 1459 GQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAK 1518
Query: 310 AGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPG-AAVPGVVSPEAAAKAAA 368
P GP G G PG G P V G + G G V P A
Sbjct: 1519 GPEGPPGPTGRQGEKGEPGR---------PGDPAVVGPAVAGPKGEKGDVGPAGPRGATG 1569
Query: 369 KAAKYGARPGVGVGGIPTYGVGAGGFPG----FGV-GVGGIPGVAGVPGVGGVPGVGGVP 423
+ G PG+ + G P G G PG G+ G G PG +G PG G PG G P
Sbjct: 1570 VQGERGP-PGLVLPGDP----GPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPP 1624
Query: 424 GVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG 483
G + P + + G PG PG G+ APGV G G G
Sbjct: 1625 G-PVGPRGRDGEVGEKGDEG-PPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDG 1682
Query: 484 VGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA---GIPGLGVGVGVPGLGVGAGV 539
+PG GP G G GA G PG G G G+
Sbjct: 1683 RNGSPGSSGPKGDRGEPGPPGPPGRLVD----TGPGAREKGEPGDRGQEGPRGPKGDPGL 1738
Query: 540 PGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG-----GVVGAGP 594
PG G+ GF PG PGV G G G G PG G+ G
Sbjct: 1739 PGAPGERGIEGFRGPPGP----------QGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPG 1788
Query: 595 AAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAA 652
AA + AA A G G GL GL G G+PG G G+P P K G
Sbjct: 1789 AAGPSGPNGAAGKA--GDPGRDGLPGLR-GEQGLPGPSGPPGLPGKPGEDGKPGLNGKNG 1845
Query: 653 RPG 655
PG
Sbjct: 1846 EPG 1848
Score = 112 bits (281), Expect = 9e-25
Identities = 217/742 (29%), Positives = 255/742 (34%), Gaps = 133/742 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
P P G PGA PG V GG GPG K PG G LG PG
Sbjct: 1342 PRGPKGEPGA-PGQVIGGE-----GPGLPGRKGDPGPSGPPGPRGPLGD------PGPRG 1389
Query: 83 PGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVY-- 140
P G+ A K K G G PG G G++ G PG PG VG PG
Sbjct: 1390 PPGLP--GTAMKGDKGDRGERGPPGPGEGGIAPGEP-GLPGLPGSPGPQGPVGPPGKKGE 1446
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVK--PKAPGVGGAFAGIPG-VGPFGGPQPGVPLGYP 197
G GA PG+ PG P G + P A G G G PG +G G P G P
Sbjct: 1447 KGDSEDGA--PGLPGQPGSPGEQGPRGPPGAIGPKGD-RGFPGPLGEAGEKGERGPPG-P 1502
Query: 198 IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFG 257
+ LPG G P G GP G G G+ G P G A A K
Sbjct: 1503 AGSRGLPGVAGRPGAKGP----EGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGD 1558
Query: 258 AGAAGVLPGVGGAGVPGVPGAI----PGIGGIAG----VGTPAAAAAAAAAAKAAKYGAA 309
G AG G G G PG + PG G G +G A + + G
Sbjct: 1559 VGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDP 1618
Query: 310 AGLVPGGPGFGP----------GVVGVPG-AGVPGV-------GVPGAGIPVV------- 344
P GP GP G G PG G+PG G PG PV
Sbjct: 1619 GRPGPPGP-VGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGD 1677
Query: 345 PGA----GIPGAA-------VPGVVSPEAAAKAAAKAAKYGARPG----------VGVGG 383
PG G PG++ PG P A+ PG G G
Sbjct: 1678 PGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPG 1737
Query: 384 IPTYGVGAGGFPGF----------GV-GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQ 432
+P G G GF GV G G G G PG+ G G+ G PG P
Sbjct: 1738 LPG-APGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAA-GPSGP 1795
Query: 433 AAAAAKAAKYGL--VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI 490
AA KA G +PG+ G+ PG PG+ PG PG+ G PG
Sbjct: 1796 NGAAGKAGDPGRDGLPGLRGEQGL---PGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGE 1852
Query: 491 ----GPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVG 545
G G + A+ + K + A LG G PGL VG PG G GVPG G G
Sbjct: 1853 DGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGF-PGVPG-GTG 1910
Query: 546 A-------------GVPGF-------GAVPGALAAAKAAKYGA-AVPGVLGGLGALGGVG 584
G+PG G+VP + A A A+ ++ G
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSF 1970
Query: 585 IPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAK 644
+P GP + K G G GL G G PG G G+
Sbjct: 1971 LPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKG----DRGDPGPQGPPGLALGERGP 2026
Query: 645 AAKYGVAARPGFGLSPIFPGGA 666
G+A PG P PG A
Sbjct: 2027 PGPSGLAGEPGKPGIPGLPGRA 2048
Score = 103 bits (256), Expect = 7e-22
Identities = 179/574 (31%), Positives = 207/574 (36%), Gaps = 146/574 (25%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGL-GAFPAVTFPG 79
P P G+ G PG G PG G G P P P GL G GL G PG
Sbjct: 2199 PQGPSGLKGE-PGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPG 2257
Query: 80 ALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----------LGVSAGAVVPQPGA-GVK- 127
A PG D A+ + G+ G PG+ G G AVV PGA G K
Sbjct: 2258 A--PG--RDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKG 2313
Query: 128 -PGKVPG--VGLPGVYPGGVLPGARFP----GVGVLPGVPTGAGVKPKAPGVGGAFAGIP 180
PG + G VG PG LPG R G PG P G K APG G F G P
Sbjct: 2314 APGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKG-APGPKG-FKGDP 2371
Query: 181 GVGPFGGPQPGVP------LGYPIKAPKLPGGYGLPYTTGKL-----PYGYGPGGVAGAA 229
GVG G P P P LG P P PG G P TG P G G+AG
Sbjct: 2372 GVGVPGSPGPPGPPGVKGDLGLP-GLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPP 2430
Query: 230 GKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGV-LPGVGGA-GVPGVPG--AIPGIGG 284
G+ G P G GP + + K G GV LPG G G PG+ G PG G
Sbjct: 2431 GREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEG 2490
Query: 285 IAGVGTPAAAAA--------AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-------- 328
G+ P + +A K K +A L P GP G +G G
Sbjct: 2491 PRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDK 2550
Query: 329 -----------------------AGVPGV-------GVPGA-GIPVVPGA----GIPGAA 353
AG+PG+ G PGA GIP PG+ G+PG
Sbjct: 2551 GPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIR 2610
Query: 354 VP----GVVSP-----EAAAKAAA-----KAAKYGA----RPGV-------GVGGIPTYG 388
G + P E K A K K A RPG+ G G+P
Sbjct: 2611 GEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQS 2670
Query: 389 --------VGAGGFPGFG-----------VGVGGIPGVAGVPGVGGVPGVGGVPGV--GI 427
+G G GF G G PG+ G PG G G G PG +
Sbjct: 2671 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSV 2730
Query: 428 SPEAQAAAAAKAAKYGLVPGVGV--APGVGVAPG 459
P + + G PG V APGV APG
Sbjct: 2731 GPRGPEGLQGQKGERG-PPGERVVGAPGVPGAPG 2763
Score = 89.4 bits (220), Expect = 1e-17
Identities = 153/535 (28%), Positives = 180/535 (33%), Gaps = 163/535 (30%)
Query: 23 PSRPG--GVPGAI-PGGVPGGVFYPALG----PGGKPLKPVPGGLAGAGLGAGLGAFPAV 75
P PG G+PG + P G PG P PG K K PGGLAG +G
Sbjct: 2274 PGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGE-------- 2325
Query: 76 TFPGAL----VPGGVADAAAAYKAAKAGA----GLGGVPGVGGLGVSAGAVVP-QPGAGV 126
PGA +PG + A +A + G G G PG G G VP PG
Sbjct: 2326 --PGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPG 2383
Query: 127 KPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG--AFAGIPG--- 181
PG +GLPG LPGA PGV PG TG + PG G AG PG
Sbjct: 2384 PPGVKGDLGLPG------LPGA--PGVVGFPG-QTGPRGEMGQPGPSGERGLAGPPGREG 2434
Query: 182 -VGPFGGPQPGVPLGYP----IKAPKLPGGYGLPYTTGKL-----------PYGYGPGGV 225
GP G P P +G P +K K G GLP G+ P GP G+
Sbjct: 2435 IPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGL 2494
Query: 226 AGAAGKAGYPTGTG-----------------VGPQAAAAAAAKAAAKFGAGAAGVLPGVG 268
G G G G +GP A + G G G
Sbjct: 2495 TGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRG 2554
Query: 269 GAGVPGVPGA-----------IPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPG- 315
G PG G+ +PG+ G+ G G P AA K G VPG
Sbjct: 2555 DNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDG-----VPGI 2609
Query: 316 ----------GPGFGPGVVGVPGA-GVPG-------VGVPGA----------GIPVVPG- 346
GP G GV GA G+ G G PG G P VPG
Sbjct: 2610 RGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQ 2669
Query: 347 AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG-------- 398
+G PG G++ P+ + G + G G P G GGFPG
Sbjct: 2670 SGAPGKE--GLIGPKGDRGFDGQPGPKGDQGEKGERGTP----GIGGFPGPSGNDGSAGP 2723
Query: 399 -----------------------------VGVGGIPGVAGVPGVGGVPGVGGVPG 424
VG G+PG G G G PG G G
Sbjct: 2724 PGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRG 2778
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 139 bits (351), Expect = 7e-33
Identities = 222/765 (29%), Positives = 268/765 (35%), Gaps = 156/765 (20%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPAL----GPGGKPLKPVPG--GLAGAGLGAGLGAF 72
PS P GVPG+ PG G+ G +P L G G+P K G G G GL
Sbjct: 373 PSGPPGVPGS-PGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGS 431
Query: 73 PA-------VTF----------PGAL-------VPGGVADAAAAYKAAKAGAGLGGVPGV 108
P + F PG L V G + G G+PG+
Sbjct: 432 PGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGL 491
Query: 109 GGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVYPGGVLPGARFPGVGVLPGV------- 159
GL G Q AG+K PG GLPG +PG FPG PG+
Sbjct: 492 PGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPG-FPG-------FPGAQGDPGLKGEKGET 543
Query: 160 --PTGAGVKPKAPGVGG--------AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGL 209
P G P PG+ G G PGV GP+ + L PG G
Sbjct: 544 LQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGS 603
Query: 210 PYTTGKL----PYGYGPGGVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFG---- 257
P + G P GYGP G G G G P G GP+ + + G
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 258 ------AGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAA 309
G G+ +G G PG+PG PGI GI G P G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCP 723
Query: 310 AGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA-GIPVVPG----------AGIPG-AAVPG 356
+ G PG PG G+PGA G P V +PG G P PG G+PG +PG
Sbjct: 724 GKM--GEPGL-PGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG 780
Query: 357 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV-GAGGFPGFG--------VGVGGIPGV 407
E + G G G G GA G PG G G G
Sbjct: 781 TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGD 840
Query: 408 AGVPGV--GGVPGVGGVPGVGISPEAQAAAAAKAAK-YGLVPGVGVAPGVGVAPGVGVAP 464
G+PG+ G PG G PG+ P Q + Y PG+ PG G+ P
Sbjct: 841 PGIPGLDRSGFPGETGSPGI---PGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFP 897
Query: 465 GVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLRAAAGLG-A 519
G PG PG PG +PGI G G A + +G
Sbjct: 898 GAIGPPG---PPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDK 954
Query: 520 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGA 579
G PGL G PG GVPG+ G+ G +PG A PG G LG+
Sbjct: 955 GEPGLKGFAGNPGEKGNRGVPGM---PGLKGLKGLPGP----------AGPPGPRGDLGS 1001
Query: 580 LGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL---------- 626
G G PG G+ G+ +K K G G AG GL G+ GL
Sbjct: 1002 TGNPGEPGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYS 1059
Query: 627 -----GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G PG G G+ P K + G PG L P P GA
Sbjct: 1060 EGTRPGPPGPTGDPGL-PGDMGKKGEMGQPGPPGH-LGPAGPEGA 1102
Score = 137 bits (346), Expect = 2e-32
Identities = 208/704 (29%), Positives = 250/704 (35%), Gaps = 104/704 (14%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
P+ P G PG P G PG G G P P P G AG G + P PG
Sbjct: 609 PAGPAGPPGYGPQGEPG-----LQGTQGVPGAPGPPGEAGP-RGELSVSTPVPGPPGPPG 662
Query: 83 PGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYP 141
P G G G PG+ G LG +P P +PG +PG+G PG P
Sbjct: 663 PPG-------------HPGPQGPPGIPGSLGKCGDPGLPGPDG--EPG-IPGIGFPG--P 704
Query: 142 GGVLPGARFPGVGVLPGVPTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-- 197
G FPG G P G P PG+ GA G P V GG PG P G+P
Sbjct: 705 PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGA-KGEPAVAMPGG--PGTP-GFPGE 760
Query: 198 ---------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAA 248
I P LPG G P G L G G G G+ G P GP+ A
Sbjct: 761 RGNSGEHGEIGLPGLPGLPGTPGNEG-LDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
K G G G G+PG+ PG G G+ P + G
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGI--PGHQGEMGPLGQRGYPG 877
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIPGAAVPGVVSPEAAAK 365
L P G G++G PGA +G PG G P PG G PG +PGV
Sbjct: 878 NPGILGPPGEDGVIGMMGFPGA----IGPPGPPGNPGTPGQRGSPG--IPGVKGQRGTPG 931
Query: 366 AAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG-----GIPGVAGVPGVGGVPGVG 420
A + G PG G G GF G G+PG+ G+ G+ G+PG
Sbjct: 932 AKGEQGDKG-NPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPA 990
Query: 421 GVPGVGISPEAQAAAAAKAAKYGL-----------VPGVGVAPGVGVAPGVGVAPGVGLA 469
G PG P + + GL +PG G PG PG+
Sbjct: 991 GPPG----PRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGL--- 1043
Query: 470 PGVGVAPGVGVAPGV--GVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIP 522
PG+ G PG G PG GP G K Q LG G P
Sbjct: 1044 PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAP 1103
Query: 523 GLGVGVGVPG-------LGVGA-----GVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 570
G G+PG LG G PG+ G+PGF PG + + + +
Sbjct: 1104 GSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPM-GIRGDQGRDGI 1162
Query: 571 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAA----AKAAQFGLVGAAGLGGLGVGGL 626
PG G G G + P G G A A + A + G +G AG G G
Sbjct: 1163 PGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRG-PTGIE 1221
Query: 627 GVPGVGGL-GGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLG 669
G PG GL G I P G PG P PG +G
Sbjct: 1222 GFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIG 1265
Score = 133 bits (335), Expect = 5e-31
Identities = 205/666 (30%), Positives = 246/666 (36%), Gaps = 112/666 (16%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGG- 85
G+PGA P G+PG +P GP G P P G G FPGA+ P G
Sbjct: 174 GLPGAPGPQGLPGPPGFP--GPVGPPGPP---GFFG--------------FPGAMGPRGP 214
Query: 86 ---VADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVY 140
+ + +K + GL G PG G V P +K G +G PG
Sbjct: 215 KGHMGERVIGHKGERGVKGLTGPPGPPGT-VIVTLTGPDNRTDLKGEKGDKGAMGEPGPP 273
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKA 200
LPG + PG P G KP GV G F G GV G PG+ IK
Sbjct: 274 GPSGLPGESYGSEKGAPGDP-GLQGKPGKDGVPG-FPGSEGVKGNRG-FPGLMGEDGIKG 330
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAG 259
K G G P G Y Y G G G P G GPQ + G
Sbjct: 331 QK--GDIGPPGFRGPTEY-YDTYQEKGDEGTPGPPGPRGARGPQGPS------------G 375
Query: 260 AAGVLPGVGGAGVPGVPGAI--PGIGGIAG---------VGTPAAAAAAAAAAKAAKYGA 308
GV PG G+ PG+ GA PG+ G G +GTP + A + G
Sbjct: 376 PPGV-PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 309 AAGLVPGGPGF------GPGVVGVPG----AGVPGV----GVPG---AGIPVVPGA-GIP 350
PG PG PG G+PG G+PGV G PG P +PG G+P
Sbjct: 435 -----PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLP 489
Query: 351 GA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG----------- 398
G + GV AA G+ G+ G P + GA G PG
Sbjct: 490 GLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP-GAQGDPGLKGEKGETLQPEG 548
Query: 399 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 457
VGV G PG+ G PG G+ G+ G PGV P + A K P PG +
Sbjct: 549 QVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGP-----PGDPGS 603
Query: 458 PGVGVAPGVGLAPGVGV--APGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515
PG G PG G PG+ GV APG PG A + V+
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPG-PPG--EAGPRGELSVSTPVPGPPGP 660
Query: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG-ALAAAKAAKYGAAVPGVL 574
G PG G+PG G PGL G PG +PG K PG
Sbjct: 661 PGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPG---IPGIGFPGPPGPKGDQGFPGTK 717
Query: 575 GGLGALGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
G LG G +G PG G G A A G G G G G +G+PG+
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSG-EHGEIGLPGLP 776
Query: 633 GLGGIP 638
GL G P
Sbjct: 777 GLPGTP 782
Score = 131 bits (330), Expect = 2e-30
Identities = 218/776 (28%), Positives = 272/776 (35%), Gaps = 168/776 (21%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAI----PGGVPGGVFYPALGPGGKPLKPVPGGLAG 62
A PR G L + + P P G PG P G+PG +LG G P P P G G
Sbjct: 642 AGPR-GELSVSTPVPGPPGPPGPPGHPGPQGPPGIPG-----SLGKCGDPGLPGPDGEPG 695
Query: 63 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGGL-GVSAGA 117
P + FPG PG D G G G+PG GL G
Sbjct: 696 ---------IPGIGFPGP--PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 118 VVPQPGAGVKPGKVPG----------VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 167
V PG PG PG +GLPG+ PG LPG PG L G P G +P
Sbjct: 745 AVAMPGGPGTPG-FPGERGNSGEHGEIGLPGL-PG--LPGT--PGNEGLDG-PRGDPGQP 797
Query: 168 KAPGVGG----------AFAGIPGVGPFGGPQ-----------PGVP----LGYPIK--A 200
PG G G+PG+ G Q PG+P G+P + +
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGS 857
Query: 201 PKLPGGYGLPYTTGKLPYGYGPG--------------GVAGAAGKAGYPTGTGV------ 240
P +PG G G+ Y PG G GA G G P G
Sbjct: 858 PGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGS 917
Query: 241 -------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GT 290
G + A + K G + + +G G PG+ G PG G GV G
Sbjct: 918 PGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGM 977
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG-------VGVPG- 338
P A G L G PG+ G+PG+ G+PG +G PG
Sbjct: 978 PGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGR 1037
Query: 339 AGIPVVPGA-------GIPGAAV---PGVVSPEAAAKAAAKAAKYG--ARPG----VGVG 382
AG P +PG G PG + PG P K G +PG +G
Sbjct: 1038 AGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPA 1097
Query: 383 GIPTYGVGAGGFPGF--------GVGVGGIPGVAGVPGVGGVPGVGGVPG----VGI-SP 429
G P G+ G PG +G GI G+ G PG+ G PG+ G PG +GI
Sbjct: 1098 G-PEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 430 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
+ + A + G + PG PG A G APG PG A +G A
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGA--MGDAGP 1214
Query: 490 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVP 549
GP G+ G PGL G +PG G PG G P
Sbjct: 1215 RGPTGIEGF--------------------PGPPGL-PGAIIPGQTGNRGPPGSRGSPGAP 1253
Query: 550 GFGAVPGA-LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 608
G PG+ + K K PG G G G +G PG + G
Sbjct: 1254 GPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG 1313
Query: 609 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G+ G G G +G +G PG G G PP + + PG P PG
Sbjct: 1314 FPGVKGEKGNPGF-LGSIGPPGPIGPKG-PPGVRGDPGTLKIISLPGSPGPPGTPG 1367
Score = 108 bits (269), Expect = 2e-23
Identities = 181/619 (29%), Positives = 216/619 (34%), Gaps = 130/619 (21%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYP-ALGPGGKPLKP----------VPGGLAGAGLGAG 68
+P PG G PG GV G + +P A+GP G P P +PG G
Sbjct: 875 YPGNPGILGPPGE--DGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGA 932
Query: 69 LGAFPAVTFPG----ALVPGGVADAA----AAYKAAKAGAGLGGVPGVGGL-GVSAGAVV 119
G PG + V G + A K G+ G+PG+ GL G+ A
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGP 992
Query: 120 PQP----GAGVKPGKVPGV-GLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 174
P P G+ PG+ PG+ G+PG +PG++ G G P AG +P PG+ G
Sbjct: 993 PGPRGDLGSTGNPGE-PGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAG-RPGLPGIHG 1048
Query: 175 AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL--PYGYGPGGVAGAAGKA 232
G G +PG P P P LPG G G+ P GP G GA G
Sbjct: 1049 LQGDKGEPGYSEGTRPGPP--GPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSP 1106
Query: 233 GYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GT 290
G P G GP G G+L G G PG+PG PG G G+ G
Sbjct: 1107 GSPGLPGKPGPHGDLGFK---------GIKGLLGPPGIRGPPGLPG-FPGSPGPMGIRGD 1156
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG---------- 338
A + + G P GP PG G G G PG G+PG
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRA--PPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGP 1214
Query: 339 ---AGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGF 394
GI PG G+PGA +PG G+R G G P G
Sbjct: 1215 RGPTGIEGFPGPPGLPGAIIPGQTGNRGPP---------GSRGSPGAPGPP-------GP 1258
Query: 395 PGFGV-GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPG 453
PG V G+ G G G PG G PG G G PG APG
Sbjct: 1259 PGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGP--------------------PGRLGAPG 1298
Query: 454 VGVAPGVGVAPGVGLAPGV-GVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLR 512
PG PG PGV G G +G IGP G
Sbjct: 1299 TPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVR------------- 1345
Query: 513 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA----AAKAAKYG- 567
G PG + +PG G PG G PG PG L K K G
Sbjct: 1346 -------GDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGK 1398
Query: 568 AAVPGVLGGLGALGGVGIP 586
PG G G G G P
Sbjct: 1399 PGTPGPAGEKGNKGSKGEP 1417
Score = 107 bits (268), Expect = 3e-23
Identities = 177/598 (29%), Positives = 218/598 (36%), Gaps = 105/598 (17%)
Query: 135 GLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGA--FAGIPGVGPFGGPQPG 191
G PG PG PG + F G LPG P G P PG+ G+ GI G+ F G PG
Sbjct: 52 GFPGP-PGS--PGQKGFTGPEGLPG-PQGPKGFPGLPGLTGSKGVRGISGLPGFSG-SPG 106
Query: 192 VPLGYPIKAPKLPGGYGLPYTTG----KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAA 247
+P P G YGL G K G+ G+ G G G P G+ Q A
Sbjct: 107 LP-----GTPGNTGPYGLVGVPGCSGSKGEQGFP--GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 248 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
A + G G+ G G+PG PG PG VG P +G
Sbjct: 160 AKEEDIELDAKGDPGLPGAPGPQGLPGPPG-FPG-----PVGPPGPPGF---------FG 204
Query: 308 AAAGLVPGGP--GFGPGVVGVPG-AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAA 364
+ P GP G V+G G GV G+ P G PG + + P+
Sbjct: 205 FPGAMGPRGPKGHMGERVIGHKGERGVKGLTGP---------PGPPGTVIVTLTGPDNRT 255
Query: 365 KAAAKAAKYGA--RPG-VGVGGIP--TYG--VGAGGFPGF-----GVGVGGIPGVAGVPG 412
+ GA PG G G+P +YG GA G PG GV G PG GV G
Sbjct: 256 DLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKG 315
Query: 413 VGGVPGVGGVPGV-----GISPEAQAAAAAKAAKYGL-----VPGVGVAPGVGVAPGVGV 462
G PG+ G G+ I P Y PG G G
Sbjct: 316 NRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSG 375
Query: 463 APGVGLAPGVGVAPGVGVAPG-VGVAPGIG----PGGVAAAAKSAAKVAAKAQLRAAAGL 517
PGV +PG PG+ APG G+ G PG A + A L + G
Sbjct: 376 PPGVPGSPG-SSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 518 GA---------------GIPGLGVGVGVPGLGVGAGVPGL-----GVGAGVPGFGAVPGA 557
G+PG G+PG+ G PGL G PG +PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLPG- 493
Query: 558 LAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA--GPAAAAAAAKAAAKAAQFGLV 613
L K G+ G G+ G G+PG G GA P + Q G+
Sbjct: 494 LHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVP 553
Query: 614 GAAGL----GGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G GL G G+ G+ G PGV GL G P A + + G PG SP PG A
Sbjct: 554 GDPGLRGQPGRKGLDGIPGTPGVKGLPG-PKGELALSGEKGDQGPPGDPGSPGSPGPA 610
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 139 bits (351), Expect = 7e-33
Identities = 222/765 (29%), Positives = 268/765 (35%), Gaps = 156/765 (20%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPAL----GPGGKPLKPVPG--GLAGAGLGAGLGAF 72
PS P GVPG+ PG G+ G +P L G G+P K G G G GL
Sbjct: 373 PSGPPGVPGS-PGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGS 431
Query: 73 PA-------VTF----------PGAL-------VPGGVADAAAAYKAAKAGAGLGGVPGV 108
P + F PG L V G + G G+PG+
Sbjct: 432 PGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGL 491
Query: 109 GGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVYPGGVLPGARFPGVGVLPGV------- 159
GL G Q AG+K PG GLPG +PG FPG PG+
Sbjct: 492 PGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPG-FPG-------FPGAQGDPGLKGEKGET 543
Query: 160 --PTGAGVKPKAPGVGG--------AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGL 209
P G P PG+ G G PGV GP+ + L PG G
Sbjct: 544 LQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGS 603
Query: 210 PYTTGKL----PYGYGPGGVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFG---- 257
P + G P GYGP G G G G P G GP+ + + G
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 258 ------AGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAA 309
G G+ +G G PG+PG PGI GI G P G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCP 723
Query: 310 AGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA-GIPVVPG----------AGIPG-AAVPG 356
+ G PG PG G+PGA G P V +PG G P PG G+PG +PG
Sbjct: 724 GKM--GEPGL-PGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG 780
Query: 357 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV-GAGGFPGFG--------VGVGGIPGV 407
E + G G G G GA G PG G G G
Sbjct: 781 TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGD 840
Query: 408 AGVPGV--GGVPGVGGVPGVGISPEAQAAAAAKAAK-YGLVPGVGVAPGVGVAPGVGVAP 464
G+PG+ G PG G PG+ P Q + Y PG+ PG G+ P
Sbjct: 841 PGIPGLDRSGFPGETGSPGI---PGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFP 897
Query: 465 GVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLRAAAGLG-A 519
G PG PG PG +PGI G G A + +G
Sbjct: 898 GAIGPPG---PPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDK 954
Query: 520 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGA 579
G PGL G PG GVPG+ G+ G +PG A PG G LG+
Sbjct: 955 GEPGLKGFAGNPGEKGNRGVPGM---PGLKGLKGLPGP----------AGPPGPRGDLGS 1001
Query: 580 LGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL---------- 626
G G PG G+ G+ +K K G G AG GL G+ GL
Sbjct: 1002 TGNPGEPGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYS 1059
Query: 627 -----GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G PG G G+ P K + G PG L P P GA
Sbjct: 1060 EGTRPGPPGPTGDPGL-PGDMGKKGEMGQPGPPGH-LGPAGPEGA 1102
Score = 137 bits (346), Expect = 2e-32
Identities = 208/704 (29%), Positives = 250/704 (35%), Gaps = 104/704 (14%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
P+ P G PG P G PG G G P P P G AG G + P PG
Sbjct: 609 PAGPAGPPGYGPQGEPG-----LQGTQGVPGAPGPPGEAGP-RGELSVSTPVPGPPGPPG 662
Query: 83 PGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYP 141
P G G G PG+ G LG +P P +PG +PG+G PG P
Sbjct: 663 PPG-------------HPGPQGPPGIPGSLGKCGDPGLPGPDG--EPG-IPGIGFPG--P 704
Query: 142 GGVLPGARFPGVGVLPGVPTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-- 197
G FPG G P G P PG+ GA G P V GG PG P G+P
Sbjct: 705 PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGA-KGEPAVAMPGG--PGTP-GFPGE 760
Query: 198 ---------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAA 248
I P LPG G P G L G G G G+ G P GP+ A
Sbjct: 761 RGNSGEHGEIGLPGLPGLPGTPGNEG-LDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
K G G G G+PG+ PG G G+ P + G
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGI--PGHQGEMGPLGQRGYPG 877
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIPGAAVPGVVSPEAAAK 365
L P G G++G PGA +G PG G P PG G PG +PGV
Sbjct: 878 NPGILGPPGEDGVIGMMGFPGA----IGPPGPPGNPGTPGQRGSPG--IPGVKGQRGTPG 931
Query: 366 AAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG-----GIPGVAGVPGVGGVPGVG 420
A + G PG G G GF G G+PG+ G+ G+ G+PG
Sbjct: 932 AKGEQGDKG-NPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPA 990
Query: 421 GVPGVGISPEAQAAAAAKAAKYGL-----------VPGVGVAPGVGVAPGVGVAPGVGLA 469
G PG P + + GL +PG G PG PG+
Sbjct: 991 GPPG----PRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGL--- 1043
Query: 470 PGVGVAPGVGVAPGV--GVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIP 522
PG+ G PG G PG GP G K Q LG G P
Sbjct: 1044 PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAP 1103
Query: 523 GLGVGVGVPG-------LGVGA-----GVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 570
G G+PG LG G PG+ G+PGF PG + + + +
Sbjct: 1104 GSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPM-GIRGDQGRDGI 1162
Query: 571 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAA----AKAAQFGLVGAAGLGGLGVGGL 626
PG G G G + P G G A A + A + G +G AG G G
Sbjct: 1163 PGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRG-PTGIE 1221
Query: 627 GVPGVGGL-GGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLG 669
G PG GL G I P G PG P PG +G
Sbjct: 1222 GFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIG 1265
Score = 133 bits (335), Expect = 5e-31
Identities = 205/666 (30%), Positives = 246/666 (36%), Gaps = 112/666 (16%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGG- 85
G+PGA P G+PG +P GP G P P G G FPGA+ P G
Sbjct: 174 GLPGAPGPQGLPGPPGFP--GPVGPPGPP---GFFG--------------FPGAMGPRGP 214
Query: 86 ---VADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVY 140
+ + +K + GL G PG G V P +K G +G PG
Sbjct: 215 KGHMGERVIGHKGERGVKGLTGPPGPPGT-VIVTLTGPDNRTDLKGEKGDKGAMGEPGPP 273
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKA 200
LPG + PG P G KP GV G F G GV G PG+ IK
Sbjct: 274 GPSGLPGESYGSEKGAPGDP-GLQGKPGKDGVPG-FPGSEGVKGNRG-FPGLMGEDGIKG 330
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAG 259
K G G P G Y Y G G G P G GPQ + G
Sbjct: 331 QK--GDIGPPGFRGPTEY-YDTYQEKGDEGTPGPPGPRGARGPQGPS------------G 375
Query: 260 AAGVLPGVGGAGVPGVPGAI--PGIGGIAG---------VGTPAAAAAAAAAAKAAKYGA 308
GV PG G+ PG+ GA PG+ G G +GTP + A + G
Sbjct: 376 PPGV-PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 309 AAGLVPGGPGF------GPGVVGVPG----AGVPGV----GVPG---AGIPVVPGA-GIP 350
PG PG PG G+PG G+PGV G PG P +PG G+P
Sbjct: 435 -----PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLP 489
Query: 351 GA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG----------- 398
G + GV AA G+ G+ G P + GA G PG
Sbjct: 490 GLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP-GAQGDPGLKGEKGETLQPEG 548
Query: 399 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 457
VGV G PG+ G PG G+ G+ G PGV P + A K P PG +
Sbjct: 549 QVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGP-----PGDPGS 603
Query: 458 PGVGVAPGVGLAPGVGV--APGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515
PG G PG G PG+ GV APG PG A + V+
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPG-PPG--EAGPRGELSVSTPVPGPPGP 660
Query: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG-ALAAAKAAKYGAAVPGVL 574
G PG G+PG G PGL G PG +PG K PG
Sbjct: 661 PGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPG---IPGIGFPGPPGPKGDQGFPGTK 717
Query: 575 GGLGALGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
G LG G +G PG G G A A G G G G G +G+PG+
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSG-EHGEIGLPGLP 776
Query: 633 GLGGIP 638
GL G P
Sbjct: 777 GLPGTP 782
Score = 131 bits (330), Expect = 2e-30
Identities = 218/776 (28%), Positives = 272/776 (35%), Gaps = 168/776 (21%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAI----PGGVPGGVFYPALGPGGKPLKPVPGGLAG 62
A PR G L + + P P G PG P G+PG +LG G P P P G G
Sbjct: 642 AGPR-GELSVSTPVPGPPGPPGPPGHPGPQGPPGIPG-----SLGKCGDPGLPGPDGEPG 695
Query: 63 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGGL-GVSAGA 117
P + FPG PG D G G G+PG GL G
Sbjct: 696 ---------IPGIGFPGP--PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 118 VVPQPGAGVKPGKVPG----------VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 167
V PG PG PG +GLPG+ PG LPG PG L G P G +P
Sbjct: 745 AVAMPGGPGTPG-FPGERGNSGEHGEIGLPGL-PG--LPGT--PGNEGLDG-PRGDPGQP 797
Query: 168 KAPGVGG----------AFAGIPGVGPFGGPQ-----------PGVP----LGYPIK--A 200
PG G G+PG+ G Q PG+P G+P + +
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGS 857
Query: 201 PKLPGGYGLPYTTGKLPYGYGPG--------------GVAGAAGKAGYPTGTGV------ 240
P +PG G G+ Y PG G GA G G P G
Sbjct: 858 PGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGS 917
Query: 241 -------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GT 290
G + A + K G + + +G G PG+ G PG G GV G
Sbjct: 918 PGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGM 977
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG-------VGVPG- 338
P A G L G PG+ G+PG+ G+PG +G PG
Sbjct: 978 PGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGR 1037
Query: 339 AGIPVVPGA-------GIPGAAV---PGVVSPEAAAKAAAKAAKYG--ARPG----VGVG 382
AG P +PG G PG + PG P K G +PG +G
Sbjct: 1038 AGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPA 1097
Query: 383 GIPTYGVGAGGFPGF--------GVGVGGIPGVAGVPGVGGVPGVGGVPG----VGI-SP 429
G P G+ G PG +G GI G+ G PG+ G PG+ G PG +GI
Sbjct: 1098 G-PEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 430 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
+ + A + G + PG PG A G APG PG A +G A
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGA--MGDAGP 1214
Query: 490 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVP 549
GP G+ G PGL G +PG G PG G P
Sbjct: 1215 RGPTGIEGF--------------------PGPPGL-PGAIIPGQTGNRGPPGSRGSPGAP 1253
Query: 550 GFGAVPGA-LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 608
G PG+ + K K PG G G G +G PG + G
Sbjct: 1254 GPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG 1313
Query: 609 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G+ G G G +G +G PG G G PP + + PG P PG
Sbjct: 1314 FPGVKGEKGNPGF-LGSIGPPGPIGPKG-PPGVRGDPGTLKIISLPGSPGPPGTPG 1367
Score = 110 bits (276), Expect = 3e-24
Identities = 191/666 (28%), Positives = 228/666 (34%), Gaps = 163/666 (24%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYP-ALGPGGKPLKP----------VPGGLAGAGLGAG 68
+P PG G PG GV G + +P A+GP G P P +PG G
Sbjct: 875 YPGNPGILGPPGE--DGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGA 932
Query: 69 LGAFPAVTFPG----ALVPGGVADAA----AAYKAAKAGAGLGGVPGVGGL-GVSAGAVV 119
G PG + V G + A K G+ G+PG+ GL G+ A
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGP 992
Query: 120 PQP----GAGVKPGKVPGV-GLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 174
P P G+ PG+ PG+ G+PG +PG++ G G P AG +P PG+ G
Sbjct: 993 PGPRGDLGSTGNPGE-PGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAG-RPGLPGIHG 1048
Query: 175 AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL--PYGYGPGGVAGAAGKA 232
G G +PG P P P LPG G G+ P GP G GA G
Sbjct: 1049 LQGDKGEPGYSEGTRPGPP--GPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSP 1106
Query: 233 GYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GT 290
G P G GP G G+L G G PG+PG PG G G+ G
Sbjct: 1107 GSPGLPGKPGPHGDLGFK---------GIKGLLGPPGIRGPPGLPG-FPGSPGPMGIRGD 1156
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG---------- 338
A + + G P GP PG G G G PG G+PG
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRA--PPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGP 1214
Query: 339 ---AGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGF 394
GI PG G+PGA +PG G+R G G P G
Sbjct: 1215 RGPTGIEGFPGPPGLPGAIIPGQTGNRGPP---------GSRGSPGAPGPP-------GP 1258
Query: 395 PGFGV-GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPG 453
PG V G+ G G G PG G PG G G PG APG
Sbjct: 1259 PGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGP--------------------PGRLGAPG 1298
Query: 454 VGVAPGVGVAPGVGLAPGV-GVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLR 512
PG PG PGV G G +G IGP G
Sbjct: 1299 TPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVR------------- 1345
Query: 513 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPG 572
G PG + +PG G PG PG PG PG
Sbjct: 1346 -------GDPGTLKIISLPGSPGPPGTPG------EPGMQGEPGP-------------PG 1379
Query: 573 VLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
G LG G G PG K + G G AG G G G PG
Sbjct: 1380 PPGNLGPCGPRGKPG------------------KDGKPGTPGPAGEKG-NKGSKGEPGPA 1420
Query: 633 GLGGIP 638
G G+P
Sbjct: 1421 GSDGLP 1426
Score = 107 bits (268), Expect = 3e-23
Identities = 177/598 (29%), Positives = 218/598 (36%), Gaps = 105/598 (17%)
Query: 135 GLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGA--FAGIPGVGPFGGPQPG 191
G PG PG PG + F G LPG P G P PG+ G+ GI G+ F G PG
Sbjct: 52 GFPGP-PGS--PGQKGFTGPEGLPG-PQGPKGFPGLPGLTGSKGVRGISGLPGFSG-SPG 106
Query: 192 VPLGYPIKAPKLPGGYGLPYTTG----KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAA 247
+P P G YGL G K G+ G+ G G G P G+ Q A
Sbjct: 107 LP-----GTPGNTGPYGLVGVPGCSGSKGEQGFP--GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 248 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
A + G G+ G G+PG PG PG VG P +G
Sbjct: 160 AKEEDIELDAKGDPGLPGAPGPQGLPGPPG-FPG-----PVGPPGPPGF---------FG 204
Query: 308 AAAGLVPGGP--GFGPGVVGVPG-AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAA 364
+ P GP G V+G G GV G+ P G PG + + P+
Sbjct: 205 FPGAMGPRGPKGHMGERVIGHKGERGVKGLTGP---------PGPPGTVIVTLTGPDNRT 255
Query: 365 KAAAKAAKYGA--RPG-VGVGGIP--TYG--VGAGGFPGF-----GVGVGGIPGVAGVPG 412
+ GA PG G G+P +YG GA G PG GV G PG GV G
Sbjct: 256 DLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKG 315
Query: 413 VGGVPGVGGVPGV-----GISPEAQAAAAAKAAKYGL-----VPGVGVAPGVGVAPGVGV 462
G PG+ G G+ I P Y PG G G
Sbjct: 316 NRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSG 375
Query: 463 APGVGLAPGVGVAPGVGVAPG-VGVAPGIG----PGGVAAAAKSAAKVAAKAQLRAAAGL 517
PGV +PG PG+ APG G+ G PG A + A L + G
Sbjct: 376 PPGVPGSPG-SSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 518 GA---------------GIPGLGVGVGVPGLGVGAGVPGL-----GVGAGVPGFGAVPGA 557
G+PG G+PG+ G PGL G PG +PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLPG- 493
Query: 558 LAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA--GPAAAAAAAKAAAKAAQFGLV 613
L K G+ G G+ G G+PG G GA P + Q G+
Sbjct: 494 LHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVP 553
Query: 614 GAAGL----GGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G GL G G+ G+ G PGV GL G P A + + G PG SP PG A
Sbjct: 554 GDPGLRGQPGRKGLDGIPGTPGVKGLPG-PKGELALSGEKGDQGPPGDPGSPGSPGPA 610
Score = 102 bits (253), Expect = 2e-21
Identities = 147/512 (28%), Positives = 183/512 (35%), Gaps = 86/512 (16%)
Query: 23 PSRPG-----GVPGAIPGGVPG--GVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 75
P PG G+PG P G PG G PG L+ +PG + G+ G +
Sbjct: 975 PGMPGLKGLKGLPG--PAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTL 1032
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVG 135
FPG AG G+PG+ GL G P G +PG G
Sbjct: 1033 GFPGR-------------------AGRPGLPGIHGLQGDKGE--PGYSEGTRPGPPGPTG 1071
Query: 136 LPGVYPGGVLP----GARFPGVGVLPGVPTGAGVKPKAPGVGG--------AFAGIPGV- 182
PG+ PG + G P + P P GA P +PG+ G F GI G+
Sbjct: 1072 DPGL-PGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLL 1130
Query: 183 GPFG--GPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGT 238
GP G GP PG+P G+P PG G+ G+ +P GP G G G P G
Sbjct: 1131 GPPGIRGP-PGLP-GFPGS----PGPMGIRGDQGRDGIP---GPAGEKGETGLLRAPPGP 1181
Query: 239 GVGPQAAAAAAAKAAAKFGA--GAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 296
P A A + A F G G + G G G+ G PG G+ G P
Sbjct: 1182 RGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEG-FPGPPGLPGAIIPGQTGN 1240
Query: 297 AAAAAKAAKYGAAAGLVPGGPGF-GPGVVGVPG----AGVPGV-GVPGAGIPVVPGAGIP 350
GA PG PG G V+G+ G G PG G PG + P +
Sbjct: 1241 RGPPGSRGSPGA-----PGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLG 1295
Query: 351 GAAVPGVVSPEAAAKAAAKAAKYGARPGVG-VGGI-PTYGVGAGGFPGFGVGVG------ 402
PG+ P G + G +G I P +G G PG G
Sbjct: 1296 APGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIIS 1355
Query: 403 -----GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 457
G PG G PG+ G PG G PG + P K K G G G
Sbjct: 1356 LPGSPGPPGTPGEPGMQGEPGPPGPPG-NLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSK 1414
Query: 458 PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
G A GL PG+ G +P G
Sbjct: 1415 GEPGPAGSDGL-PGLKGKRGDSGSPATWTTRG 1445
Score = 93.6 bits (231), Expect = 5e-19
Identities = 150/505 (29%), Positives = 189/505 (37%), Gaps = 80/505 (15%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPG--GVPGAIPG-GVPGGVFYPA-LGPGGKPLKPV 56
+ GL A PG L S +P PG G+PG++ G+PG LG G+ +P
Sbjct: 983 LKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPG 1042
Query: 57 PGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA-GLGGVPG-VGGLGVS 114
G+ G G + T PG PG D K G G G PG +G G
Sbjct: 1043 LPGIHGLQGDKGEPGYSEGTRPGP--PGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPE 1100
Query: 115 AGAVVP-QPGAGVKPGKVPGVGLPGVY----PGGV-----LPGARFPG----VGVL---- 156
P PG KPG +G G+ P G+ LPG FPG +G+
Sbjct: 1101 GAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPG--FPGSPGPMGIRGDQG 1158
Query: 157 -PGVPTGAGVKPKA------------PGVGGA--------FAGIPG-VGPFGGPQPGVPL 194
G+P AG K + PG GA F G+PG G G P P
Sbjct: 1159 RDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPT 1218
Query: 195 G---YPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG---VGPQAAAAA 248
G +P P LPG +P TG GP G G+ G G P G +G + +
Sbjct: 1219 GIEGFP-GPPGLPGAI-IPGQTGNR----GPPGSRGSPGAPGPPGPPGSHVIGIKGDKGS 1272
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYG 307
K G AG + G G PG PG +PG G G G P G
Sbjct: 1273 MGHPGPKGPPGTAGDMGPPGRLGAPGTPG-LPGPRGDPGFQGFPGVKGEKGNPGFLGSIG 1331
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA----GIPVVPGA-GIPGA-AVPGVVSPE 361
+ P GP PGV G PG + + +PG+ G P PG G PG PG + P
Sbjct: 1332 PPGPIGPKGP---PGVRGDPGT-LKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPC 1387
Query: 362 AAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGG 421
K K G G G G+ G PG G G+PG+ G G G P
Sbjct: 1388 GPRGKPGKDGKPGTPGPAGEKG----NKGSKGEPG-PAGSDGLPGLKGKRGDSGSPATWT 1442
Query: 422 VPGVGISPEAQAAAAAKAAKYGLVP 446
G + +Q A + G VP
Sbjct: 1443 TRGFVFTRHSQTTAIPSCPE-GTVP 1466
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 139 bits (351), Expect = 7e-33
Identities = 222/765 (29%), Positives = 268/765 (35%), Gaps = 156/765 (20%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPAL----GPGGKPLKPVPG--GLAGAGLGAGLGAF 72
PS P GVPG+ PG G+ G +P L G G+P K G G G GL
Sbjct: 373 PSGPPGVPGS-PGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGS 431
Query: 73 PA-------VTF----------PGAL-------VPGGVADAAAAYKAAKAGAGLGGVPGV 108
P + F PG L V G + G G+PG+
Sbjct: 432 PGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGL 491
Query: 109 GGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVYPGGVLPGARFPGVGVLPGV------- 159
GL G Q AG+K PG GLPG +PG FPG PG+
Sbjct: 492 PGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPG-FPG-------FPGAQGDPGLKGEKGET 543
Query: 160 --PTGAGVKPKAPGVGG--------AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGL 209
P G P PG+ G G PGV GP+ + L PG G
Sbjct: 544 LQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGS 603
Query: 210 PYTTGKL----PYGYGPGGVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFG---- 257
P + G P GYGP G G G G P G GP+ + + G
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 258 ------AGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAA 309
G G+ +G G PG+PG PGI GI G P G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCP 723
Query: 310 AGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA-GIPVVPG----------AGIPG-AAVPG 356
+ G PG PG G+PGA G P V +PG G P PG G+PG +PG
Sbjct: 724 GKM--GEPGL-PGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG 780
Query: 357 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV-GAGGFPGFG--------VGVGGIPGV 407
E + G G G G GA G PG G G G
Sbjct: 781 TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGD 840
Query: 408 AGVPGV--GGVPGVGGVPGVGISPEAQAAAAAKAAK-YGLVPGVGVAPGVGVAPGVGVAP 464
G+PG+ G PG G PG+ P Q + Y PG+ PG G+ P
Sbjct: 841 PGIPGLDRSGFPGETGSPGI---PGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFP 897
Query: 465 GVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLRAAAGLG-A 519
G PG PG PG +PGI G G A + +G
Sbjct: 898 GAIGPPG---PPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDK 954
Query: 520 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGA 579
G PGL G PG GVPG+ G+ G +PG A PG G LG+
Sbjct: 955 GEPGLKGFAGNPGEKGNRGVPGM---PGLKGLKGLPGP----------AGPPGPRGDLGS 1001
Query: 580 LGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL---------- 626
G G PG G+ G+ +K K G G AG GL G+ GL
Sbjct: 1002 TGNPGEPGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYS 1059
Query: 627 -----GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G PG G G+ P K + G PG L P P GA
Sbjct: 1060 EGTRPGPPGPTGDPGL-PGDMGKKGEMGQPGPPGH-LGPAGPEGA 1102
Score = 137 bits (346), Expect = 2e-32
Identities = 208/704 (29%), Positives = 250/704 (35%), Gaps = 104/704 (14%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
P+ P G PG P G PG G G P P P G AG G + P PG
Sbjct: 609 PAGPAGPPGYGPQGEPG-----LQGTQGVPGAPGPPGEAGP-RGELSVSTPVPGPPGPPG 662
Query: 83 PGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYP 141
P G G G PG+ G LG +P P +PG +PG+G PG P
Sbjct: 663 PPG-------------HPGPQGPPGIPGSLGKCGDPGLPGPDG--EPG-IPGIGFPG--P 704
Query: 142 GGVLPGARFPGVGVLPGVPTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-- 197
G FPG G P G P PG+ GA G P V GG PG P G+P
Sbjct: 705 PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGA-KGEPAVAMPGG--PGTP-GFPGE 760
Query: 198 ---------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAA 248
I P LPG G P G L G G G G+ G P GP+ A
Sbjct: 761 RGNSGEHGEIGLPGLPGLPGTPGNEG-LDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
K G G G G+PG+ PG G G+ P + G
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGI--PGHQGEMGPLGQRGYPG 877
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIPGAAVPGVVSPEAAAK 365
L P G G++G PGA +G PG G P PG G PG +PGV
Sbjct: 878 NPGILGPPGEDGVIGMMGFPGA----IGPPGPPGNPGTPGQRGSPG--IPGVKGQRGTPG 931
Query: 366 AAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG-----GIPGVAGVPGVGGVPGVG 420
A + G PG G G GF G G+PG+ G+ G+ G+PG
Sbjct: 932 AKGEQGDKG-NPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPA 990
Query: 421 GVPGVGISPEAQAAAAAKAAKYGL-----------VPGVGVAPGVGVAPGVGVAPGVGLA 469
G PG P + + GL +PG G PG PG+
Sbjct: 991 GPPG----PRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGL--- 1043
Query: 470 PGVGVAPGVGVAPGV--GVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIP 522
PG+ G PG G PG GP G K Q LG G P
Sbjct: 1044 PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAP 1103
Query: 523 GLGVGVGVPG-------LGVGA-----GVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 570
G G+PG LG G PG+ G+PGF PG + + + +
Sbjct: 1104 GSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPM-GIRGDQGRDGI 1162
Query: 571 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAA----AKAAQFGLVGAAGLGGLGVGGL 626
PG G G G + P G G A A + A + G +G AG G G
Sbjct: 1163 PGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRG-PTGIE 1221
Query: 627 GVPGVGGL-GGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLG 669
G PG GL G I P G PG P PG +G
Sbjct: 1222 GFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIG 1265
Score = 133 bits (335), Expect = 5e-31
Identities = 205/666 (30%), Positives = 246/666 (36%), Gaps = 112/666 (16%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGG- 85
G+PGA P G+PG +P GP G P P G G FPGA+ P G
Sbjct: 174 GLPGAPGPQGLPGPPGFP--GPVGPPGPP---GFFG--------------FPGAMGPRGP 214
Query: 86 ---VADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVY 140
+ + +K + GL G PG G V P +K G +G PG
Sbjct: 215 KGHMGERVIGHKGERGVKGLTGPPGPPGT-VIVTLTGPDNRTDLKGEKGDKGAMGEPGPP 273
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKA 200
LPG + PG P G KP GV G F G GV G PG+ IK
Sbjct: 274 GPSGLPGESYGSEKGAPGDP-GLQGKPGKDGVPG-FPGSEGVKGNRG-FPGLMGEDGIKG 330
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAG 259
K G G P G Y Y G G G P G GPQ + G
Sbjct: 331 QK--GDIGPPGFRGPTEY-YDTYQEKGDEGTPGPPGPRGARGPQGPS------------G 375
Query: 260 AAGVLPGVGGAGVPGVPGAI--PGIGGIAG---------VGTPAAAAAAAAAAKAAKYGA 308
GV PG G+ PG+ GA PG+ G G +GTP + A + G
Sbjct: 376 PPGV-PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 309 AAGLVPGGPGF------GPGVVGVPG----AGVPGV----GVPG---AGIPVVPGA-GIP 350
PG PG PG G+PG G+PGV G PG P +PG G+P
Sbjct: 435 -----PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLP 489
Query: 351 GA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG----------- 398
G + GV AA G+ G+ G P + GA G PG
Sbjct: 490 GLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP-GAQGDPGLKGEKGETLQPEG 548
Query: 399 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 457
VGV G PG+ G PG G+ G+ G PGV P + A K P PG +
Sbjct: 549 QVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGP-----PGDPGS 603
Query: 458 PGVGVAPGVGLAPGVGV--APGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515
PG G PG G PG+ GV APG PG A + V+
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPG-PPG--EAGPRGELSVSTPVPGPPGP 660
Query: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG-ALAAAKAAKYGAAVPGVL 574
G PG G+PG G PGL G PG +PG K PG
Sbjct: 661 PGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPG---IPGIGFPGPPGPKGDQGFPGTK 717
Query: 575 GGLGALGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
G LG G +G PG G G A A G G G G G +G+PG+
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSG-EHGEIGLPGLP 776
Query: 633 GLGGIP 638
GL G P
Sbjct: 777 GLPGTP 782
Score = 131 bits (330), Expect = 2e-30
Identities = 218/776 (28%), Positives = 272/776 (35%), Gaps = 168/776 (21%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAI----PGGVPGGVFYPALGPGGKPLKPVPGGLAG 62
A PR G L + + P P G PG P G+PG +LG G P P P G G
Sbjct: 642 AGPR-GELSVSTPVPGPPGPPGPPGHPGPQGPPGIPG-----SLGKCGDPGLPGPDGEPG 695
Query: 63 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGGL-GVSAGA 117
P + FPG PG D G G G+PG GL G
Sbjct: 696 ---------IPGIGFPGP--PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 118 VVPQPGAGVKPGKVPG----------VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 167
V PG PG PG +GLPG+ PG LPG PG L G P G +P
Sbjct: 745 AVAMPGGPGTPG-FPGERGNSGEHGEIGLPGL-PG--LPGT--PGNEGLDG-PRGDPGQP 797
Query: 168 KAPGVGG----------AFAGIPGVGPFGGPQ-----------PGVP----LGYPIK--A 200
PG G G+PG+ G Q PG+P G+P + +
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGS 857
Query: 201 PKLPGGYGLPYTTGKLPYGYGPG--------------GVAGAAGKAGYPTGTGV------ 240
P +PG G G+ Y PG G GA G G P G
Sbjct: 858 PGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGS 917
Query: 241 -------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GT 290
G + A + K G + + +G G PG+ G PG G GV G
Sbjct: 918 PGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGM 977
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG-------VGVPG- 338
P A G L G PG+ G+PG+ G+PG +G PG
Sbjct: 978 PGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGR 1037
Query: 339 AGIPVVPGA-------GIPGAAV---PGVVSPEAAAKAAAKAAKYG--ARPG----VGVG 382
AG P +PG G PG + PG P K G +PG +G
Sbjct: 1038 AGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPA 1097
Query: 383 GIPTYGVGAGGFPGF--------GVGVGGIPGVAGVPGVGGVPGVGGVPG----VGI-SP 429
G P G+ G PG +G GI G+ G PG+ G PG+ G PG +GI
Sbjct: 1098 G-PEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 430 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
+ + A + G + PG PG A G APG PG A +G A
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGA--MGDAGP 1214
Query: 490 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVP 549
GP G+ G PGL G +PG G PG G P
Sbjct: 1215 RGPTGIEGF--------------------PGPPGL-PGAIIPGQTGNRGPPGSRGSPGAP 1253
Query: 550 GFGAVPGA-LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 608
G PG+ + K K PG G G G +G PG + G
Sbjct: 1254 GPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG 1313
Query: 609 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G+ G G G +G +G PG G G PP + + PG P PG
Sbjct: 1314 FPGVKGEKGNPGF-LGSIGPPGPIGPKG-PPGVRGDPGTLKIISLPGSPGPPGTPG 1367
Score = 110 bits (276), Expect = 3e-24
Identities = 191/666 (28%), Positives = 228/666 (34%), Gaps = 163/666 (24%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYP-ALGPGGKPLKP----------VPGGLAGAGLGAG 68
+P PG G PG GV G + +P A+GP G P P +PG G
Sbjct: 875 YPGNPGILGPPGE--DGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGA 932
Query: 69 LGAFPAVTFPG----ALVPGGVADAA----AAYKAAKAGAGLGGVPGVGGL-GVSAGAVV 119
G PG + V G + A K G+ G+PG+ GL G+ A
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGP 992
Query: 120 PQP----GAGVKPGKVPGV-GLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 174
P P G+ PG+ PG+ G+PG +PG++ G G P AG +P PG+ G
Sbjct: 993 PGPRGDLGSTGNPGE-PGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAG-RPGLPGIHG 1048
Query: 175 AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL--PYGYGPGGVAGAAGKA 232
G G +PG P P P LPG G G+ P GP G GA G
Sbjct: 1049 LQGDKGEPGYSEGTRPGPP--GPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSP 1106
Query: 233 GYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GT 290
G P G GP G G+L G G PG+PG PG G G+ G
Sbjct: 1107 GSPGLPGKPGPHGDLGFK---------GIKGLLGPPGIRGPPGLPG-FPGSPGPMGIRGD 1156
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG---------- 338
A + + G P GP PG G G G PG G+PG
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRA--PPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGP 1214
Query: 339 ---AGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGF 394
GI PG G+PGA +PG G+R G G P G
Sbjct: 1215 RGPTGIEGFPGPPGLPGAIIPGQTGNRGPP---------GSRGSPGAPGPP-------GP 1258
Query: 395 PGFGV-GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPG 453
PG V G+ G G G PG G PG G G PG APG
Sbjct: 1259 PGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGP--------------------PGRLGAPG 1298
Query: 454 VGVAPGVGVAPGVGLAPGV-GVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLR 512
PG PG PGV G G +G IGP G
Sbjct: 1299 TPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVR------------- 1345
Query: 513 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPG 572
G PG + +PG G PG PG PG PG
Sbjct: 1346 -------GDPGTLKIISLPGSPGPPGTPG------EPGMQGEPGP-------------PG 1379
Query: 573 VLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
G LG G G PG K + G G AG G G G PG
Sbjct: 1380 PPGNLGPCGPRGKPG------------------KDGKPGTPGPAGEKG-NKGSKGEPGPA 1420
Query: 633 GLGGIP 638
G G+P
Sbjct: 1421 GSDGLP 1426
Score = 107 bits (268), Expect = 3e-23
Identities = 177/598 (29%), Positives = 218/598 (36%), Gaps = 105/598 (17%)
Query: 135 GLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGA--FAGIPGVGPFGGPQPG 191
G PG PG PG + F G LPG P G P PG+ G+ GI G+ F G PG
Sbjct: 52 GFPGP-PGS--PGQKGFTGPEGLPG-PQGPKGFPGLPGLTGSKGVRGISGLPGFSG-SPG 106
Query: 192 VPLGYPIKAPKLPGGYGLPYTTG----KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAA 247
+P P G YGL G K G+ G+ G G G P G+ Q A
Sbjct: 107 LP-----GTPGNTGPYGLVGVPGCSGSKGEQGFP--GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 248 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
A + G G+ G G+PG PG PG VG P +G
Sbjct: 160 AKEEDIELDAKGDPGLPGAPGPQGLPGPPG-FPG-----PVGPPGPPGF---------FG 204
Query: 308 AAAGLVPGGP--GFGPGVVGVPG-AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAA 364
+ P GP G V+G G GV G+ P G PG + + P+
Sbjct: 205 FPGAMGPRGPKGHMGERVIGHKGERGVKGLTGP---------PGPPGTVIVTLTGPDNRT 255
Query: 365 KAAAKAAKYGA--RPG-VGVGGIP--TYG--VGAGGFPGF-----GVGVGGIPGVAGVPG 412
+ GA PG G G+P +YG GA G PG GV G PG GV G
Sbjct: 256 DLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKG 315
Query: 413 VGGVPGVGGVPGV-----GISPEAQAAAAAKAAKYGL-----VPGVGVAPGVGVAPGVGV 462
G PG+ G G+ I P Y PG G G
Sbjct: 316 NRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSG 375
Query: 463 APGVGLAPGVGVAPGVGVAPG-VGVAPGIG----PGGVAAAAKSAAKVAAKAQLRAAAGL 517
PGV +PG PG+ APG G+ G PG A + A L + G
Sbjct: 376 PPGVPGSPG-SSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 518 GA---------------GIPGLGVGVGVPGLGVGAGVPGL-----GVGAGVPGFGAVPGA 557
G+PG G+PG+ G PGL G PG +PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLPG- 493
Query: 558 LAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA--GPAAAAAAAKAAAKAAQFGLV 613
L K G+ G G+ G G+PG G GA P + Q G+
Sbjct: 494 LHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVP 553
Query: 614 GAAGL----GGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G GL G G+ G+ G PGV GL G P A + + G PG SP PG A
Sbjct: 554 GDPGLRGQPGRKGLDGIPGTPGVKGLPG-PKGELALSGEKGDQGPPGDPGSPGSPGPA 610
Score = 102 bits (253), Expect = 2e-21
Identities = 147/512 (28%), Positives = 183/512 (35%), Gaps = 86/512 (16%)
Query: 23 PSRPG-----GVPGAIPGGVPG--GVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 75
P PG G+PG P G PG G PG L+ +PG + G+ G +
Sbjct: 975 PGMPGLKGLKGLPG--PAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTL 1032
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVG 135
FPG AG G+PG+ GL G P G +PG G
Sbjct: 1033 GFPGR-------------------AGRPGLPGIHGLQGDKGE--PGYSEGTRPGPPGPTG 1071
Query: 136 LPGVYPGGVLP----GARFPGVGVLPGVPTGAGVKPKAPGVGG--------AFAGIPGV- 182
PG+ PG + G P + P P GA P +PG+ G F GI G+
Sbjct: 1072 DPGL-PGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLL 1130
Query: 183 GPFG--GPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGT 238
GP G GP PG+P G+P PG G+ G+ +P GP G G G P G
Sbjct: 1131 GPPGIRGP-PGLP-GFPGS----PGPMGIRGDQGRDGIP---GPAGEKGETGLLRAPPGP 1181
Query: 239 GVGPQAAAAAAAKAAAKFGA--GAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 296
P A A + A F G G + G G G+ G PG G+ G P
Sbjct: 1182 RGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEG-FPGPPGLPGAIIPGQTGN 1240
Query: 297 AAAAAKAAKYGAAAGLVPGGPGF-GPGVVGVPG----AGVPGV-GVPGAGIPVVPGAGIP 350
GA PG PG G V+G+ G G PG G PG + P +
Sbjct: 1241 RGPPGSRGSPGA-----PGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLG 1295
Query: 351 GAAVPGVVSPEAAAKAAAKAAKYGARPGVG-VGGI-PTYGVGAGGFPGFGVGVG------ 402
PG+ P G + G +G I P +G G PG G
Sbjct: 1296 APGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIIS 1355
Query: 403 -----GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 457
G PG G PG+ G PG G PG + P K K G G G
Sbjct: 1356 LPGSPGPPGTPGEPGMQGEPGPPGPPG-NLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSK 1414
Query: 458 PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
G A GL PG+ G +P G
Sbjct: 1415 GEPGPAGSDGL-PGLKGKRGDSGSPATWTTRG 1445
Score = 93.6 bits (231), Expect = 5e-19
Identities = 150/505 (29%), Positives = 189/505 (37%), Gaps = 80/505 (15%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPG--GVPGAIPG-GVPGGVFYPA-LGPGGKPLKPV 56
+ GL A PG L S +P PG G+PG++ G+PG LG G+ +P
Sbjct: 983 LKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPG 1042
Query: 57 PGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA-GLGGVPG-VGGLGVS 114
G+ G G + T PG PG D K G G G PG +G G
Sbjct: 1043 LPGIHGLQGDKGEPGYSEGTRPGP--PGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPE 1100
Query: 115 AGAVVP-QPGAGVKPGKVPGVGLPGVY----PGGV-----LPGARFPG----VGVL---- 156
P PG KPG +G G+ P G+ LPG FPG +G+
Sbjct: 1101 GAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPG--FPGSPGPMGIRGDQG 1158
Query: 157 -PGVPTGAGVKPKA------------PGVGGA--------FAGIPG-VGPFGGPQPGVPL 194
G+P AG K + PG GA F G+PG G G P P
Sbjct: 1159 RDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPT 1218
Query: 195 G---YPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG---VGPQAAAAA 248
G +P P LPG +P TG GP G G+ G G P G +G + +
Sbjct: 1219 GIEGFP-GPPGLPGAI-IPGQTGNR----GPPGSRGSPGAPGPPGPPGSHVIGIKGDKGS 1272
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYG 307
K G AG + G G PG PG +PG G G G P G
Sbjct: 1273 MGHPGPKGPPGTAGDMGPPGRLGAPGTPG-LPGPRGDPGFQGFPGVKGEKGNPGFLGSIG 1331
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA----GIPVVPGA-GIPGA-AVPGVVSPE 361
+ P GP PGV G PG + + +PG+ G P PG G PG PG + P
Sbjct: 1332 PPGPIGPKGP---PGVRGDPGT-LKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPC 1387
Query: 362 AAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGG 421
K K G G G G+ G PG G G+PG+ G G G P
Sbjct: 1388 GPRGKPGKDGKPGTPGPAGEKG----NKGSKGEPG-PAGSDGLPGLKGKRGDSGSPATWT 1442
Query: 422 VPGVGISPEAQAAAAAKAAKYGLVP 446
G + +Q A + G VP
Sbjct: 1443 TRGFVFTRHSQTTAIPSCPE-GTVP 1466
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 139 bits (351), Expect = 7e-33
Identities = 222/765 (29%), Positives = 268/765 (35%), Gaps = 156/765 (20%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPAL----GPGGKPLKPVPG--GLAGAGLGAGLGAF 72
PS P GVPG+ PG G+ G +P L G G+P K G G G GL
Sbjct: 373 PSGPPGVPGS-PGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGS 431
Query: 73 PA-------VTF----------PGAL-------VPGGVADAAAAYKAAKAGAGLGGVPGV 108
P + F PG L V G + G G+PG+
Sbjct: 432 PGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGL 491
Query: 109 GGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVYPGGVLPGARFPGVGVLPGV------- 159
GL G Q AG+K PG GLPG +PG FPG PG+
Sbjct: 492 PGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPG-FPG-------FPGAQGDPGLKGEKGET 543
Query: 160 --PTGAGVKPKAPGVGG--------AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGL 209
P G P PG+ G G PGV GP+ + L PG G
Sbjct: 544 LQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGS 603
Query: 210 PYTTGKL----PYGYGPGGVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFG---- 257
P + G P GYGP G G G G P G GP+ + + G
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 258 ------AGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAA 309
G G+ +G G PG+PG PGI GI G P G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCP 723
Query: 310 AGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA-GIPVVPG----------AGIPG-AAVPG 356
+ G PG PG G+PGA G P V +PG G P PG G+PG +PG
Sbjct: 724 GKM--GEPGL-PGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG 780
Query: 357 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV-GAGGFPGFG--------VGVGGIPGV 407
E + G G G G GA G PG G G G
Sbjct: 781 TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGD 840
Query: 408 AGVPGV--GGVPGVGGVPGVGISPEAQAAAAAKAAK-YGLVPGVGVAPGVGVAPGVGVAP 464
G+PG+ G PG G PG+ P Q + Y PG+ PG G+ P
Sbjct: 841 PGIPGLDRSGFPGETGSPGI---PGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFP 897
Query: 465 GVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLRAAAGLG-A 519
G PG PG PG +PGI G G A + +G
Sbjct: 898 GAIGPPG---PPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDK 954
Query: 520 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGA 579
G PGL G PG GVPG+ G+ G +PG A PG G LG+
Sbjct: 955 GEPGLKGFAGNPGEKGNRGVPGM---PGLKGLKGLPGP----------AGPPGPRGDLGS 1001
Query: 580 LGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL---------- 626
G G PG G+ G+ +K K G G AG GL G+ GL
Sbjct: 1002 TGNPGEPGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYS 1059
Query: 627 -----GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G PG G G+ P K + G PG L P P GA
Sbjct: 1060 EGTRPGPPGPTGDPGL-PGDMGKKGEMGQPGPPGH-LGPAGPEGA 1102
Score = 137 bits (346), Expect = 2e-32
Identities = 208/704 (29%), Positives = 250/704 (35%), Gaps = 104/704 (14%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
P+ P G PG P G PG G G P P P G AG G + P PG
Sbjct: 609 PAGPAGPPGYGPQGEPG-----LQGTQGVPGAPGPPGEAGP-RGELSVSTPVPGPPGPPG 662
Query: 83 PGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYP 141
P G G G PG+ G LG +P P +PG +PG+G PG P
Sbjct: 663 PPG-------------HPGPQGPPGIPGSLGKCGDPGLPGPDG--EPG-IPGIGFPG--P 704
Query: 142 GGVLPGARFPGVGVLPGVPTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-- 197
G FPG G P G P PG+ GA G P V GG PG P G+P
Sbjct: 705 PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGA-KGEPAVAMPGG--PGTP-GFPGE 760
Query: 198 ---------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAA 248
I P LPG G P G L G G G G+ G P GP+ A
Sbjct: 761 RGNSGEHGEIGLPGLPGLPGTPGNEG-LDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGVP-GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
K G G G G+PG+ PG G G+ P + G
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGI--PGHQGEMGPLGQRGYPG 877
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIPGAAVPGVVSPEAAAK 365
L P G G++G PGA +G PG G P PG G PG +PGV
Sbjct: 878 NPGILGPPGEDGVIGMMGFPGA----IGPPGPPGNPGTPGQRGSPG--IPGVKGQRGTPG 931
Query: 366 AAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG-----GIPGVAGVPGVGGVPGVG 420
A + G PG G G GF G G+PG+ G+ G+ G+PG
Sbjct: 932 AKGEQGDKG-NPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPA 990
Query: 421 GVPGVGISPEAQAAAAAKAAKYGL-----------VPGVGVAPGVGVAPGVGVAPGVGLA 469
G PG P + + GL +PG G PG PG+
Sbjct: 991 GPPG----PRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGL--- 1043
Query: 470 PGVGVAPGVGVAPGV--GVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIP 522
PG+ G PG G PG GP G K Q LG G P
Sbjct: 1044 PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAP 1103
Query: 523 GLGVGVGVPG-------LGVGA-----GVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 570
G G+PG LG G PG+ G+PGF PG + + + +
Sbjct: 1104 GSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPM-GIRGDQGRDGI 1162
Query: 571 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAA----AKAAQFGLVGAAGLGGLGVGGL 626
PG G G G + P G G A A + A + G +G AG G G
Sbjct: 1163 PGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRG-PTGIE 1221
Query: 627 GVPGVGGL-GGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLG 669
G PG GL G I P G PG P PG +G
Sbjct: 1222 GFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIG 1265
Score = 133 bits (335), Expect = 5e-31
Identities = 205/666 (30%), Positives = 246/666 (36%), Gaps = 112/666 (16%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGG- 85
G+PGA P G+PG +P GP G P P G G FPGA+ P G
Sbjct: 174 GLPGAPGPQGLPGPPGFP--GPVGPPGPP---GFFG--------------FPGAMGPRGP 214
Query: 86 ---VADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVK--PGKVPGVGLPGVY 140
+ + +K + GL G PG G V P +K G +G PG
Sbjct: 215 KGHMGERVIGHKGERGVKGLTGPPGPPGT-VIVTLTGPDNRTDLKGEKGDKGAMGEPGPP 273
Query: 141 PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKA 200
LPG + PG P G KP GV G F G GV G PG+ IK
Sbjct: 274 GPSGLPGESYGSEKGAPGDP-GLQGKPGKDGVPG-FPGSEGVKGNRG-FPGLMGEDGIKG 330
Query: 201 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAG 259
K G G P G Y Y G G G P G GPQ + G
Sbjct: 331 QK--GDIGPPGFRGPTEY-YDTYQEKGDEGTPGPPGPRGARGPQGPS------------G 375
Query: 260 AAGVLPGVGGAGVPGVPGAI--PGIGGIAG---------VGTPAAAAAAAAAAKAAKYGA 308
GV PG G+ PG+ GA PG+ G G +GTP + A + G
Sbjct: 376 PPGV-PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 309 AAGLVPGGPGF------GPGVVGVPG----AGVPGV----GVPG---AGIPVVPGA-GIP 350
PG PG PG G+PG G+PGV G PG P +PG G+P
Sbjct: 435 -----PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLP 489
Query: 351 GA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG----------- 398
G + GV AA G+ G+ G P + GA G PG
Sbjct: 490 GLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP-GAQGDPGLKGEKGETLQPEG 548
Query: 399 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 457
VGV G PG+ G PG G+ G+ G PGV P + A K P PG +
Sbjct: 549 QVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGP-----PGDPGS 603
Query: 458 PGVGVAPGVGLAPGVGV--APGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515
PG G PG G PG+ GV APG PG A + V+
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPG-PPG--EAGPRGELSVSTPVPGPPGP 660
Query: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG-ALAAAKAAKYGAAVPGVL 574
G PG G+PG G PGL G PG +PG K PG
Sbjct: 661 PGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPG---IPGIGFPGPPGPKGDQGFPGTK 717
Query: 575 GGLGALGGVGIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
G LG G +G PG G G A A G G G G G +G+PG+
Sbjct: 718 GSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSG-EHGEIGLPGLP 776
Query: 633 GLGGIP 638
GL G P
Sbjct: 777 GLPGTP 782
Score = 131 bits (330), Expect = 2e-30
Identities = 218/776 (28%), Positives = 272/776 (35%), Gaps = 168/776 (21%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAI----PGGVPGGVFYPALGPGGKPLKPVPGGLAG 62
A PR G L + + P P G PG P G+PG +LG G P P P G G
Sbjct: 642 AGPR-GELSVSTPVPGPPGPPGPPGHPGPQGPPGIPG-----SLGKCGDPGLPGPDGEPG 695
Query: 63 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGGL-GVSAGA 117
P + FPG PG D G G G+PG GL G
Sbjct: 696 ---------IPGIGFPGP--PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 118 VVPQPGAGVKPGKVPG----------VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 167
V PG PG PG +GLPG+ PG LPG PG L G P G +P
Sbjct: 745 AVAMPGGPGTPG-FPGERGNSGEHGEIGLPGL-PG--LPGT--PGNEGLDG-PRGDPGQP 797
Query: 168 KAPGVGG----------AFAGIPGVGPFGGPQ-----------PGVP----LGYPIK--A 200
PG G G+PG+ G Q PG+P G+P + +
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGS 857
Query: 201 PKLPGGYGLPYTTGKLPYGYGPG--------------GVAGAAGKAGYPTGTGV------ 240
P +PG G G+ Y PG G GA G G P G
Sbjct: 858 PGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGS 917
Query: 241 -------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GT 290
G + A + K G + + +G G PG+ G PG G GV G
Sbjct: 918 PGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGM 977
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG-------VGVPG- 338
P A G L G PG+ G+PG+ G+PG +G PG
Sbjct: 978 PGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGR 1037
Query: 339 AGIPVVPGA-------GIPGAAV---PGVVSPEAAAKAAAKAAKYG--ARPG----VGVG 382
AG P +PG G PG + PG P K G +PG +G
Sbjct: 1038 AGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPA 1097
Query: 383 GIPTYGVGAGGFPGF--------GVGVGGIPGVAGVPGVGGVPGVGGVPG----VGI-SP 429
G P G+ G PG +G GI G+ G PG+ G PG+ G PG +GI
Sbjct: 1098 G-PEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 430 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
+ + A + G + PG PG A G APG PG A +G A
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGA--MGDAGP 1214
Query: 490 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVP 549
GP G+ G PGL G +PG G PG G P
Sbjct: 1215 RGPTGIEGF--------------------PGPPGL-PGAIIPGQTGNRGPPGSRGSPGAP 1253
Query: 550 GFGAVPGA-LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 608
G PG+ + K K PG G G G +G PG + G
Sbjct: 1254 GPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG 1313
Query: 609 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G+ G G G +G +G PG G G PP + + PG P PG
Sbjct: 1314 FPGVKGEKGNPGF-LGSIGPPGPIGPKG-PPGVRGDPGTLKIISLPGSPGPPGTPG 1367
Score = 110 bits (276), Expect = 3e-24
Identities = 191/666 (28%), Positives = 228/666 (34%), Gaps = 163/666 (24%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYP-ALGPGGKPLKP----------VPGGLAGAGLGAG 68
+P PG G PG GV G + +P A+GP G P P +PG G
Sbjct: 875 YPGNPGILGPPGE--DGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGA 932
Query: 69 LGAFPAVTFPG----ALVPGGVADAA----AAYKAAKAGAGLGGVPGVGGL-GVSAGAVV 119
G PG + V G + A K G+ G+PG+ GL G+ A
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGP 992
Query: 120 PQP----GAGVKPGKVPGV-GLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 174
P P G+ PG+ PG+ G+PG +PG++ G G P AG +P PG+ G
Sbjct: 993 PGPRGDLGSTGNPGE-PGLRGIPGSMGNMGMPGSK--GKRGTLGFPGRAG-RPGLPGIHG 1048
Query: 175 AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL--PYGYGPGGVAGAAGKA 232
G G +PG P P P LPG G G+ P GP G GA G
Sbjct: 1049 LQGDKGEPGYSEGTRPGPP--GPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSP 1106
Query: 233 GYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GT 290
G P G GP G G+L G G PG+PG PG G G+ G
Sbjct: 1107 GSPGLPGKPGPHGDLGFK---------GIKGLLGPPGIRGPPGLPG-FPGSPGPMGIRGD 1156
Query: 291 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG---------- 338
A + + G P GP PG G G G PG G+PG
Sbjct: 1157 QGRDGIPGPAGEKGETGLLRA--PPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGP 1214
Query: 339 ---AGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGF 394
GI PG G+PGA +PG G+R G G P G
Sbjct: 1215 RGPTGIEGFPGPPGLPGAIIPGQTGNRGPP---------GSRGSPGAPGPP-------GP 1258
Query: 395 PGFGV-GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPG 453
PG V G+ G G G PG G PG G G PG APG
Sbjct: 1259 PGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGP--------------------PGRLGAPG 1298
Query: 454 VGVAPGVGVAPGVGLAPGV-GVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLR 512
PG PG PGV G G +G IGP G
Sbjct: 1299 TPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVR------------- 1345
Query: 513 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPG 572
G PG + +PG G PG PG PG PG
Sbjct: 1346 -------GDPGTLKIISLPGSPGPPGTPG------EPGMQGEPGP-------------PG 1379
Query: 573 VLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 632
G LG G G PG K + G G AG G G G PG
Sbjct: 1380 PPGNLGPCGPRGKPG------------------KDGKPGTPGPAGEKG-NKGSKGEPGPA 1420
Query: 633 GLGGIP 638
G G+P
Sbjct: 1421 GSDGLP 1426
Score = 107 bits (268), Expect = 3e-23
Identities = 177/598 (29%), Positives = 218/598 (36%), Gaps = 105/598 (17%)
Query: 135 GLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGA--FAGIPGVGPFGGPQPG 191
G PG PG PG + F G LPG P G P PG+ G+ GI G+ F G PG
Sbjct: 52 GFPGP-PGS--PGQKGFTGPEGLPG-PQGPKGFPGLPGLTGSKGVRGISGLPGFSG-SPG 106
Query: 192 VPLGYPIKAPKLPGGYGLPYTTG----KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAA 247
+P P G YGL G K G+ G+ G G G P G+ Q A
Sbjct: 107 LP-----GTPGNTGPYGLVGVPGCSGSKGEQGFP--GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 248 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 307
A + G G+ G G+PG PG PG VG P +G
Sbjct: 160 AKEEDIELDAKGDPGLPGAPGPQGLPGPPG-FPG-----PVGPPGPPGF---------FG 204
Query: 308 AAAGLVPGGP--GFGPGVVGVPG-AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAA 364
+ P GP G V+G G GV G+ P G PG + + P+
Sbjct: 205 FPGAMGPRGPKGHMGERVIGHKGERGVKGLTGP---------PGPPGTVIVTLTGPDNRT 255
Query: 365 KAAAKAAKYGA--RPG-VGVGGIP--TYG--VGAGGFPGF-----GVGVGGIPGVAGVPG 412
+ GA PG G G+P +YG GA G PG GV G PG GV G
Sbjct: 256 DLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKG 315
Query: 413 VGGVPGVGGVPGV-----GISPEAQAAAAAKAAKYGL-----VPGVGVAPGVGVAPGVGV 462
G PG+ G G+ I P Y PG G G
Sbjct: 316 NRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSG 375
Query: 463 APGVGLAPGVGVAPGVGVAPG-VGVAPGIG----PGGVAAAAKSAAKVAAKAQLRAAAGL 517
PGV +PG PG+ APG G+ G PG A + A L + G
Sbjct: 376 PPGVPGSPG-SSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGP 434
Query: 518 GA---------------GIPGLGVGVGVPGLGVGAGVPGL-----GVGAGVPGFGAVPGA 557
G+PG G+PG+ G PGL G PG +PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLPG- 493
Query: 558 LAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA--GPAAAAAAAKAAAKAAQFGLV 613
L K G+ G G+ G G+PG G GA P + Q G+
Sbjct: 494 LHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVP 553
Query: 614 GAAGL----GGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGA 666
G GL G G+ G+ G PGV GL G P A + + G PG SP PG A
Sbjct: 554 GDPGLRGQPGRKGLDGIPGTPGVKGLPG-PKGELALSGEKGDQGPPGDPGSPGSPGPA 610
Score = 102 bits (253), Expect = 2e-21
Identities = 147/512 (28%), Positives = 183/512 (35%), Gaps = 86/512 (16%)
Query: 23 PSRPG-----GVPGAIPGGVPG--GVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 75
P PG G+PG P G PG G PG L+ +PG + G+ G +
Sbjct: 975 PGMPGLKGLKGLPG--PAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTL 1032
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVG 135
FPG AG G+PG+ GL G P G +PG G
Sbjct: 1033 GFPGR-------------------AGRPGLPGIHGLQGDKGE--PGYSEGTRPGPPGPTG 1071
Query: 136 LPGVYPGGVLP----GARFPGVGVLPGVPTGAGVKPKAPGVGG--------AFAGIPGV- 182
PG+ PG + G P + P P GA P +PG+ G F GI G+
Sbjct: 1072 DPGL-PGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLL 1130
Query: 183 GPFG--GPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGT 238
GP G GP PG+P G+P PG G+ G+ +P GP G G G P G
Sbjct: 1131 GPPGIRGP-PGLP-GFPGS----PGPMGIRGDQGRDGIP---GPAGEKGETGLLRAPPGP 1181
Query: 239 GVGPQAAAAAAAKAAAKFGA--GAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 296
P A A + A F G G + G G G+ G PG G+ G P
Sbjct: 1182 RGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEG-FPGPPGLPGAIIPGQTGN 1240
Query: 297 AAAAAKAAKYGAAAGLVPGGPGF-GPGVVGVPG----AGVPGV-GVPGAGIPVVPGAGIP 350
GA PG PG G V+G+ G G PG G PG + P +
Sbjct: 1241 RGPPGSRGSPGA-----PGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLG 1295
Query: 351 GAAVPGVVSPEAAAKAAAKAAKYGARPGVG-VGGI-PTYGVGAGGFPGFGVGVG------ 402
PG+ P G + G +G I P +G G PG G
Sbjct: 1296 APGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIIS 1355
Query: 403 -----GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 457
G PG G PG+ G PG G PG + P K K G G G
Sbjct: 1356 LPGSPGPPGTPGEPGMQGEPGPPGPPG-NLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSK 1414
Query: 458 PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
G A GL PG+ G +P G
Sbjct: 1415 GEPGPAGSDGL-PGLKGKRGDSGSPATWTTRG 1445
Score = 93.6 bits (231), Expect = 5e-19
Identities = 150/505 (29%), Positives = 189/505 (37%), Gaps = 80/505 (15%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPG--GVPGAIPG-GVPGGVFYPA-LGPGGKPLKPV 56
+ GL A PG L S +P PG G+PG++ G+PG LG G+ +P
Sbjct: 983 LKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPG 1042
Query: 57 PGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA-GLGGVPG-VGGLGVS 114
G+ G G + T PG PG D K G G G PG +G G
Sbjct: 1043 LPGIHGLQGDKGEPGYSEGTRPGP--PGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPE 1100
Query: 115 AGAVVP-QPGAGVKPGKVPGVGLPGVY----PGGV-----LPGARFPG----VGVL---- 156
P PG KPG +G G+ P G+ LPG FPG +G+
Sbjct: 1101 GAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPG--FPGSPGPMGIRGDQG 1158
Query: 157 -PGVPTGAGVKPKA------------PGVGGA--------FAGIPG-VGPFGGPQPGVPL 194
G+P AG K + PG GA F G+PG G G P P
Sbjct: 1159 RDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPT 1218
Query: 195 G---YPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG---VGPQAAAAA 248
G +P P LPG +P TG GP G G+ G G P G +G + +
Sbjct: 1219 GIEGFP-GPPGLPGAI-IPGQTGNR----GPPGSRGSPGAPGPPGPPGSHVIGIKGDKGS 1272
Query: 249 AAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYG 307
K G AG + G G PG PG +PG G G G P G
Sbjct: 1273 MGHPGPKGPPGTAGDMGPPGRLGAPGTPG-LPGPRGDPGFQGFPGVKGEKGNPGFLGSIG 1331
Query: 308 AAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA----GIPVVPGA-GIPGA-AVPGVVSPE 361
+ P GP PGV G PG + + +PG+ G P PG G PG PG + P
Sbjct: 1332 PPGPIGPKGP---PGVRGDPGT-LKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPC 1387
Query: 362 AAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGG 421
K K G G G G+ G PG G G+PG+ G G G P
Sbjct: 1388 GPRGKPGKDGKPGTPGPAGEKG----NKGSKGEPG-PAGSDGLPGLKGKRGDSGSPATWT 1442
Query: 422 VPGVGISPEAQAAAAAKAAKYGLVP 446
G + +Q A + G VP
Sbjct: 1443 TRGFVFTRHSQTTAIPSCPE-GTVP 1466
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 139 bits (350), Expect = 9e-33
Identities = 219/714 (30%), Positives = 257/714 (35%), Gaps = 126/714 (17%)
Query: 23 PSRPGGVPGAI-PGGVPGGVFYPALGPGGKPLKPVPG--GLAGA-GLGAGLGAFPAVTFP 78
P P G+PG P GVPG L+ VPG GL G GL A LG+ P
Sbjct: 905 PQGPPGIPGPPGPPGVPG-------------LQGVPGNNGLPGQPGLTAELGSLPIEQHL 951
Query: 79 GALVPGGVADAAAA---YKAAKAGAGLGGVPGVGGLGVSAGAVVP--QPGAGVK------ 127
+ G A Y K G G+PGV GL A + +P A
Sbjct: 952 LKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSE 1011
Query: 128 --PGKVPGVGLPGVYPGGVLPGARF----PGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG 181
PG V GLPG PG LPG R PG+ PG P G PG GA G PG
Sbjct: 1012 GDPGCVGSPGLPGP-PG--LPGQRGEEGPPGMRGSPGPPGPIG----PPGFPGA-VGSPG 1063
Query: 182 VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTG 239
+ G + L P PG G P TG LP G G G+AG+ G P G
Sbjct: 1064 LPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPG 1123
Query: 240 V----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAA 295
GP A + + +G G G G PG PG PG G VG+P
Sbjct: 1124 SEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGP-PGFPG--KVGSPGPPG 1180
Query: 296 AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV----GVPGAGIPVVPGAGIP 350
A G + +PG PG PG G+ G AG+ G+ G PG G P
Sbjct: 1181 PQAEKGSEGIRGPSG--LPGSPG-PPGPPGIQGPAGLDGLDGKDGKPGL-------RGDP 1230
Query: 351 G-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPGF--GVGVGGIP 405
G A PG++ P G + G G P T GA G PG G G P
Sbjct: 1231 GPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPP 1290
Query: 406 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 465
G G PG G PG G+ VG+ + A G+ PG PG PG
Sbjct: 1291 GHVGPPGPPGQPGPAGISAVGLKGDRGATGER---------GLAGLPGQPGPPGHPGPPG 1341
Query: 466 VGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGL 524
PG A G PG G GP G AA + K RA G G G
Sbjct: 1342 ---EPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKG--RAGMPGGPGKSGS 1396
Query: 525 GVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--------------------AAKAA 564
VG PG G PG +G PG VPG++ + A
Sbjct: 1397 MGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMA 1456
Query: 565 KYG---------AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGA 615
Y AA PG G G G G PG P + + + Q GL G
Sbjct: 1457 YYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPG-----APGSPGLPGQIGREGRQ-GLPGV 1510
Query: 616 AGLGGL----GVGGLGVPGVGGLGGIP-PAAAAKAAKYGVAARPGFGLSPIFPG 664
GL G G G+G+ G GL G P P K G G P PG
Sbjct: 1511 RGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIPGIPG 1564
Score = 129 bits (324), Expect = 9e-30
Identities = 218/761 (28%), Positives = 257/761 (33%), Gaps = 141/761 (18%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPAL-GPGGKPLKPVPGGLAG------AGLGAGLGAFPAV 75
P PGG PG P G G P GPGGKP KP G G L G F V
Sbjct: 466 PGDPGGPPG--PKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNF--V 521
Query: 76 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLG----VSAGAVVPQPGAGVKPGKV 131
PG P G + G+ G G L V A +V GA G
Sbjct: 522 GLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGS- 580
Query: 132 PGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV--------- 182
PG GLPG+ +PG + P G+ P PG G AGI G
Sbjct: 581 PGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGS---PGPPGPVGP-AGIKGAKGEPCEPCP 636
Query: 183 ----------------GPFGGP-QPGVP-LGYPIKAPKL--------------PGGYGLP 210
GP G +PG P G P K K PG G P
Sbjct: 637 ALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTP 696
Query: 211 YTTGKLPYGYGPGGVAGAAGKAGYP-TGTGVGPQAAAAAAAKAAAKFGAGAAGVL--PGV 267
TTG+ P G GV G AG G G P A G G GV
Sbjct: 697 GTTGR-PGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGV 755
Query: 268 GGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVP 327
G G PG PG +PG+ G G+ G PG PG PG+ G+P
Sbjct: 756 GRPGKPGQPG-LPGVQGPPGLKGVQGEPGPPGRGVQGPQGE-----PGAPGL-PGIQGLP 808
Query: 328 GA-GVPG-VGVPGA-GIPVVPGA----GIPGAAV---PGVVSPEAAAKAAAKAAKYGARP 377
G G PG G GA G P V GA G PGA+V PG + + G R
Sbjct: 809 GPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRG 868
Query: 378 GVGVGG---IPTYG----VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP- 429
G G P+ G G G PG +G PG G PG+ G PG GVPG+ P
Sbjct: 869 EKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPG 928
Query: 430 -EAQAAAAAKAAKYGLVP---------------GVGVAPGVGVAPGVGVAPGVGLAPGVG 473
A+ G +P G PG V G G+ PG+
Sbjct: 929 NNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVPGLD 988
Query: 474 VA-----------------------PGVGVAPGVGVAPGI-------GPGGVAAAAKSAA 503
PG +PG+ PG+ GP G+ +
Sbjct: 989 NCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPG 1048
Query: 504 KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKA 563
+ A G G+PGL G+ GL G PG G PG PG L K
Sbjct: 1049 PIGPPG-FPGAVG-SPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPG-LPGIKG 1105
Query: 564 AKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGV 623
+ G G G G G+PG AGP + + G G G G
Sbjct: 1106 ERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPG-PP 1164
Query: 624 GGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 664
G G PG G G PP A+ G+ G SP PG
Sbjct: 1165 GPPGFPGKVGSPG-PPGPQAEKGSEGIRGPSGLPGSPGPPG 1204
Score = 115 bits (289), Expect = 1e-25
Identities = 195/686 (28%), Positives = 231/686 (33%), Gaps = 125/686 (18%)
Query: 30 PGAIPGGVPGGVFYPALGP-GGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVAD 88
P + G V GP GGK + +PG G G P A P A+
Sbjct: 317 PPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGNDCVRISPDA--PLQCAE 374
Query: 89 AAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGA 148
K G G+PG G G + G+K G+PG
Sbjct: 375 GPKGEKGESGALGPSGLPGSTG---EKGQKGEKGDGGIK-------GVPGK--------- 415
Query: 149 RFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYG 208
PG PG G PK F G G+ GP PG+P P G G
Sbjct: 416 --PGRDGRPGEICVIG--PKGQKGDPGFVGPEGLAGEPGP-PGLPG---------PPGIG 461
Query: 209 LPYTTGKLPYG-------YGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAA 261
LP T G P G G G+ G G G P GV + G
Sbjct: 462 LPGTPGD-PGGPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNF 520
Query: 262 GVLPG-VGGAGVPGVP---GAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGG 316
LPG G G PG P PGI GI G G P + ++ A+ A G
Sbjct: 521 VGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGS 580
Query: 317 PGFGPGVVGVPG-AGVPGV-------------GVPGAGIPVVPGAGIPGAAVPGVVSPEA 362
PGF G+ G+PG AGVPG+ G PG PV P AGI GA A
Sbjct: 581 PGF--GLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGP-AGIKGAKGEPCEPCPA 637
Query: 363 AAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV----------GVGGIPGVAGVPG 412
+ + A PG P+ G G PGFG+ G+ G G AG PG
Sbjct: 638 LSNLQDGDVRVVALPG------PSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPG 691
Query: 413 VGGVPGVGGVPGVGISPEAQAAAAAKAAK----------YGLVPGVGVAPGVGVAPGVGV 462
G PG G PG+ P Q A K K G V + PG G
Sbjct: 692 DPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQG 751
Query: 463 APGVGL--APGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA 519
GVG PG PGV PG+ GV GP G
Sbjct: 752 PEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGE---------------P 796
Query: 520 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGA 579
G PGL G+ GL G PG G G V G A GA+V G G G
Sbjct: 797 GAPGL---PGIQGLPGPRGPPGPTGEKGAQGSPGVKG--ATGPVGPPGASVSGPPGRDGQ 851
Query: 580 LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLV--GAAGLGGLGVGGLGVPGVGGLGGI 637
G G+ G GP + +Q L+ G G GL +G PG G GI
Sbjct: 852 QGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGI 911
Query: 638 P--------PAAAAKAAKYGVAARPG 655
P P G+ +PG
Sbjct: 912 PGPPGPPGVPGLQGVPGNNGLPGQPG 937
Score = 104 bits (260), Expect = 2e-22
Identities = 163/538 (30%), Positives = 198/538 (36%), Gaps = 91/538 (16%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPG--GLAGAGLGAGLGAFPAVTFPGALVPG 84
G PG I P G PG V P L PG + + + G G G G +P T P L PG
Sbjct: 1045 GPPGPIGPPGFPGAVGSPGL-PGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGL-PG 1102
Query: 85 GVADAAAAYKAAKAGA----GLGGVPGVGGLGVSAGAVVPQPGAGVK------------- 127
+ A + G G G+PG G G PQ +G K
Sbjct: 1103 IKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPG 1162
Query: 128 -------PGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFA-- 177
PGKV G PG G R P G+ PG P G++ A G+ G
Sbjct: 1163 PPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPA-GLDGLDGKD 1221
Query: 178 GIPGV----GPFGGPQPGVPLGYPIKA--------------PKLPGGYGLPYTTGKLPYG 219
G PG+ GP G P P G+ K P PG G P G+ P
Sbjct: 1222 GKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGE-PGA 1280
Query: 220 YGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKA--AAKFGAGAAGVLPGVGGAGVPGVP 276
GP G G G G P G GP +A K A G AG+ G G PG P
Sbjct: 1281 MGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPGHPGPP 1340
Query: 277 GAIPGIGGIAG----------VGTPAAAAAAAAAAKAAKYG--AAAGLVPGGPGFGP--G 322
G PG G AG G P AA + + G AG+ PGGPG G
Sbjct: 1341 GE-PGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGM-PGGPGKSGSMG 1398
Query: 323 VVGVPG-AGVPG-VGVPG-AGIPVVPGAGIPGAA--------VPGVVSPEAAAKAAAKAA 371
VG PG AG G G PG +G P +PG +PG+ + + E + A
Sbjct: 1399 PVGPPGPAGERGHPGAPGPSGSPGLPG--VPGSMGDMVNYDEIKRFIRQEIIKMFDERMA 1456
Query: 372 KYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEA 431
Y +R P A G PG G G PG G PG G+PG G G P
Sbjct: 1457 YYTSRMQ-----FPMEMAAAPGRPG-PPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGV 1510
Query: 432 QAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 489
+ K K + G+ G+ PG PG G G G+ PG+ PG
Sbjct: 1511 RGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGI-PGIPGPPG 1567
Score = 93.6 bits (231), Expect = 5e-19
Identities = 138/445 (31%), Positives = 173/445 (38%), Gaps = 77/445 (17%)
Query: 23 PSRPGGVPGAIPG-GVPG--------GVFYPALGPGGKPLKPVPGGLAG-AGLGA--GLG 70
P P G PG + G PG G+ P+ G G P P P G+ G AGL G
Sbjct: 1163 PPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPS-GLPGSPGPPGPPGIQGPAGLDGLDGKD 1221
Query: 71 AFPAVTF-PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPG 129
P + PG P G+ +K GL G G G G+ +PGA +PG
Sbjct: 1222 GKPGLRGDPGPAGPPGLM-GPPGFKGKTGHPGLPGPKGDCGKPGPPGST-GRPGAEGEPG 1279
Query: 130 KVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG--------AFAGIPG 181
+ G PG PG V P PG PG P AG+ A G+ G AG+PG
Sbjct: 1280 AMGPQGRPGP-PGHVGP----PGP---PGQPGPAGIS--AVGLKGDRGATGERGLAGLPG 1329
Query: 182 V-GPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYP 235
GP G P P G A P G YG P G P G G AG G+AG P
Sbjct: 1330 QPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGD-PGAAGQKGQAGEKGRAGMP 1388
Query: 236 TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGGIAGVGTPAAA 294
G G A + G A PG G+ G+PGVPG++ + +
Sbjct: 1389 GGPGKSGSMGPVGPPGPAGERGHPGA---PGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQ 1445
Query: 295 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA-GIPVVPGA----- 347
+ Y + P PG G PG G PG PGA G P +PG
Sbjct: 1446 EIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGR--PGAPGSPGLPGQIGREG 1503
Query: 348 --GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV----GAGGFPGFG-V 399
G+PG +PG G + +G+G G+ G G PG+G +
Sbjct: 1504 RQGLPGVRGLPGTK---------------GEKGDIGIGIAGENGLPGPPGPQGPPGYGKM 1548
Query: 400 GVGGIPGVAGVPGVGGVPGVGGVPG 424
G G G G+PG+ G PG G PG
Sbjct: 1549 GATGPMGQQGIPGIPGPPGPMGQPG 1573
Score = 44.7 bits (104), Expect = 3e-04
Identities = 61/200 (30%), Positives = 74/200 (37%), Gaps = 30/200 (15%)
Query: 466 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 525
V LAP G G G G+ PG G A +++ A L+ A G G G
Sbjct: 328 VTLAPS-GPKGGKGER-GLPGPPG-SKGEKGARGNDCVRISPDAPLQCAEG-PKGEKGES 383
Query: 526 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 585
+G GL G G G G VPG K + G PG + +G G G
Sbjct: 384 GALGPSGLPGSTGEKGQKGEKGDGGIKGVPG-----KPGRDGR--PGEICVIGPKGQKGD 436
Query: 586 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGIPPAAAAK 644
PG V GP GL G G GL G G+G+PG G G PP
Sbjct: 437 PGFV---GPE---------------GLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGD 478
Query: 645 AAKYGVAARPGFGLSPIFPG 664
G+ + G G P PG
Sbjct: 479 KGSSGIPGKEGPGGKPGKPG 498
>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
Length = 1714
Score = 138 bits (348), Expect = 1e-32
Identities = 201/702 (28%), Positives = 254/702 (36%), Gaps = 117/702 (16%)
Query: 23 PSRPGGVPG--------AIPG-----GVPG--GVFYPALGPGGKPLKPVPGGLAGAGLGA 67
P P G+PG IPG G+PG G P PG P +PVPG GL
Sbjct: 499 PPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSG 558
Query: 68 -----------GLGAFPAVT-FPGAL-VPGGVAD-AAAAYKAAKAGAGLGGVPGVGGLGV 113
GL P + PG +PG + + Y + AG G PG G
Sbjct: 559 LMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKG--- 615
Query: 114 SAGAVVPQPGAGVKPGKVPGVGLPGV-----------YPGGVLPGARFP-GVGVLPGVPT 161
A + PG + G G+PG+ +PG G R P G+ PG+
Sbjct: 616 -AQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDF--GDRGPAGLDGSPGLVG 672
Query: 162 GAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYG 221
G G P PG+ G+ + +GP G P P+G L G GLP G G
Sbjct: 673 GTG-PPGFPGLRGSVGPVGPIGPAGIPG---PMG-------LSGNKGLPGIKG----DKG 717
Query: 222 PGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--A 278
G AG G+ GYP G VG K+ G G+ G G G PG
Sbjct: 718 EQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIG 777
Query: 279 IPGIGGIAGV-------GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AG 330
IPG G G G P + GA L P G G G PG G
Sbjct: 778 IPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEG 837
Query: 331 VPG-VGVPG--AGIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 386
+ G VG G I G+PG + G + + + G + +G G P
Sbjct: 838 LKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPG 897
Query: 387 Y--GVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPG-VGI-SPEAQAAAAAKAAKY 442
+G G PG VG G PG G G G G G+ G GI + + K +
Sbjct: 898 VPGPIGPLGLPGH-VGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPH 956
Query: 443 GLVPGVG--VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPGGVA 496
GL+ G G PG+ PG G+ PG+ G PG GP G
Sbjct: 957 GLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTE 1016
Query: 497 AAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG 556
+ + AK + A +G G G PGL G PG G G VPG
Sbjct: 1017 GESGLQGEPGAKGDVGTAGSVG--------GTGEPGLRGEPGAPGEEGLQGKDGLKGVPG 1068
Query: 557 --ALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVG----------------AGPAA 596
L K +PG++G LG G G+PG G+VG GP
Sbjct: 1069 GRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTG 1128
Query: 597 AAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 638
+ K + G GA G G VG LG+ G G GIP
Sbjct: 1129 EVGSRGPPGKIGKSGPKGARGTRG-AVGHLGLMGPDGEPGIP 1169
Score = 108 bits (269), Expect = 2e-23
Identities = 218/801 (27%), Positives = 271/801 (33%), Gaps = 178/801 (22%)
Query: 22 HPSRPGGVPG--AIPG--GVPGGVFYPA----LGPGGKP-LKPVPGGLAGAGLGAGLGAF 72
HP PG +PG IPG G G YP GP G P K G + G LG
Sbjct: 574 HPGLPG-LPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPE 632
Query: 73 PAVTFPGAL----------VPGGVADAAAAYKAAKAG-AGLGGVPGVGGLGVSAGAVVPQ 121
PG PG D A G G G PG GL S G V P
Sbjct: 633 GERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPI 692
Query: 122 PGAGVKPGKVP---GVGLPGVY-------PGGVLPGARFPGVGVLPGVPTGAGVKPKAPG 171
AG+ PG + GLPG+ G L +PG G+P G++ K+
Sbjct: 693 GPAGI-PGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGP 751
Query: 172 VGGAFAGIPGV-GPFGGPQP-------GVPLGYPIKAPK-------LPGGYGLPYTTGKL 216
G G PG+ GP G P P G+P + PK PG GL T G+
Sbjct: 752 SGQT--GDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEE 809
Query: 217 -PYG----YGPGGVAGAAGKAGYPTGTG-------------------VGPQAAAAAAAKA 252
P G GP G G G AG P G VG
Sbjct: 810 GPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSI 869
Query: 253 AAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAG 311
K G+ G L G GV G PG PG+ G G +G P A G
Sbjct: 870 GEKGERGSPGPLGPQGEKGVMGYPGP-PGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGS 928
Query: 312 LVPGGPGFGPGVVGVPGA-------------------------GVPGV-GVPGA----GI 341
P G G+ G G G PG+ G+PG+ G+
Sbjct: 929 RGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGL 988
Query: 342 PVVPGA-GIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 396
P PG G+ G P G+ P + + GA+ VG G VG G PG
Sbjct: 989 PGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAG----SVGGTGEPG 1044
Query: 397 F----------GV----GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442
G+ G+ G+PG G+PG G G G+PG+ I P ++
Sbjct: 1045 LRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGI-IGPLGRSGQTGLPGPE 1103
Query: 443 GLV--PGVGVAPG-------VGVAPGVGVA--PG-VGLAPGVGVAPGVGVAPGVGVA--- 487
G+V PG PG +G VG PG +G + G G +G+
Sbjct: 1104 GIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPD 1163
Query: 488 --PGI----------------GPGGVAAAAKSAAKVAAKAQLRAAAG-LG-------AGI 521
PGI GP G + V R G +G G
Sbjct: 1164 GEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGA 1223
Query: 522 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAA-----KAAKYGAAVPGVLGG 576
G VGVPGL G G G G + G + K A + PG+ G
Sbjct: 1224 EGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGL 1283
Query: 577 LGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGG 636
G LG GI G G + K G+ G G GL G G PGV G G
Sbjct: 1284 QGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLA-GAPGPPGVKGSSG 1342
Query: 637 IP--PAAAAKAAKYGVAARPG 655
+P P + G+ +PG
Sbjct: 1343 LPGSPGIQGPKGEQGLPGQPG 1363
Score = 97.1 bits (240), Expect = 5e-20
Identities = 187/676 (27%), Positives = 234/676 (34%), Gaps = 140/676 (20%)
Query: 28 GVPGAI-PGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGV 86
G PG + P G G + YP GP G VPG + GL +GA PG+ P G
Sbjct: 876 GSPGPLGPQGEKGVMGYP--GPPG-----VPGPIGPLGLPGHVGARGP---PGSQGPKGQ 925
Query: 87 ADAAA--------AYKAAKAGAGLGGVPGVGGLGVSAG-----AVVPQPGAGVKPGKVPG 133
+ + AK G G G GL G +PG PG
Sbjct: 926 RGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGD 985
Query: 134 VGLPGVYPG--GVLPGARFPGVGVLPGVP-----TGAGVKPKAPGVGGAFAGIPGVGPFG 186
GLPG PG G+ PG + G P +G +P A G G + G G G
Sbjct: 986 RGLPGE-PGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPG 1044
Query: 187 -GPQPGVPLGYPIKAPK----LPGGYGLPYTTGKL----------PYGY-------GPGG 224
+PG P ++ +PGG GLP G+ P G GP G
Sbjct: 1045 LRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEG 1104
Query: 225 VAGAAGKAGYPTGTG----------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPG 274
+ G G+ G P G VG + K+ K G G + +G G G
Sbjct: 1105 IVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDG 1164
Query: 275 VPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPG 333
PG IPG G G P+ K + L P GP PG VG G G PG
Sbjct: 1165 EPG-IPGYRGHQGQPGPSGLPGPKGE-KGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPG 1222
Query: 334 V-GVPG-AGIPVVPGA----GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 386
G G G+P + GA G PG G + + K GA G GIP
Sbjct: 1223 AEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPG 1282
Query: 387 YG--VGAGGFPGF--GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442
+G G G+ G+ G PG G PG G+PG+ G PG
Sbjct: 1283 LQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPG------------------ 1324
Query: 443 GLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSA 502
G+ APG PGV + G+ +PG+ G PG PG
Sbjct: 1325 --------RTGLAGAPG---PPGVKGSSGLPGSPGIQGPKGEQGLPG-QPG--------- 1363
Query: 503 AKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAK 562
+ K R A G G PGL G PG G+ GF PG K
Sbjct: 1364 --IQGKRGHRGAQGDQG-------PCGDPGL---KGQPGEYGVQGLTGFQGFPG----PK 1407
Query: 563 AAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG 622
+ A + G+ G G +G G GP + G G G G
Sbjct: 1408 GPEGDAGIVGISGPKGPIGHRG------NTGPLGREGIIGPTGRTGPRGEKGFRGETG-P 1460
Query: 623 VGGLGVPGVGGLGGIP 638
G G PG G G P
Sbjct: 1461 QGPRGQPGPPGPPGAP 1476
Score = 76.6 bits (187), Expect = 7e-14
Identities = 123/477 (25%), Positives = 170/477 (35%), Gaps = 77/477 (16%)
Query: 215 KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPG 274
++ Y GP G G G G P G GP G G+ G G+PG
Sbjct: 483 EMEYLRGPKGDTGPPGPPG-PAGIP-GPSGKR------------GPRGIPGPHGNPGLPG 528
Query: 275 VPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG 333
+PG G P + + G + + P G G+ G PG G+PG
Sbjct: 529 LPGP------KGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPG 582
Query: 334 -VGVPG----AGIPVVPG-------------------AGIPGAA----------VPGVVS 359
G+PG G P PG G PG A +PG+
Sbjct: 583 EQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRG 642
Query: 360 PEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPGF--GVGVGGIPGVAGVPGVGG 415
+ +G R G+ G P G G GFPG VG G G AG+PG G
Sbjct: 643 KKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMG 702
Query: 416 VPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVA 475
+ G G+PG+ + + A + + G PG A G+ PG+ G G
Sbjct: 703 LSGNKGLPGIK-GDKGEQGTAGELGEPG-YPGDKGAVGLPGPPGMRGKSGPSGQTGDPGL 760
Query: 476 PGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGV 535
G PG P PG + ++ + K L G PGL G G
Sbjct: 761 QGPSGPPG----PEGFPGDIGIPGQNGPE-GPKGLLGNRG--PPGPPGLKGTQGEEGPIG 813
Query: 536 GAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA- 592
G G G G+ PG + K G +G +G G VG+PG G+ G+
Sbjct: 814 AFGELGPRGKPGQKGYAGEPG----PEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSI 869
Query: 593 GPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGIPPAAAAKAAK 647
G + + G++G G G+ +G LG+PG G G P + K +
Sbjct: 870 GEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQR 926
Score = 73.2 bits (178), Expect = 8e-13
Identities = 127/427 (29%), Positives = 158/427 (37%), Gaps = 53/427 (12%)
Query: 26 PGGVPGAIPG--GVPGGVFYPA-LGPGGKP-LKPVPGGLAGAGLGAGLGAFPAVTFPGAL 81
P G+ G IPG G PG +GP G+ + PG + +G G AV G +
Sbjct: 1102 PEGIVG-IPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLM 1160
Query: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAG---AVVPQPGAGVKPGKVPGVGLPG 138
P G Y+ + G G+PG G G V+ PG +PG V G G
Sbjct: 1161 GPDG-EPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERG 1219
Query: 139 VYPGGVLPGAR-FPGVGVLPGV--PTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLG 195
PGA + G +PG+ TG P PG G G+ G G +
Sbjct: 1220 E------PGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGE-QGLKGERGSEGNKGKKGAP 1272
Query: 196 YPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAK 255
P P +PG GL G Y +G G++G GK G P G Q
Sbjct: 1273 GPSGKPGIPGLQGLLGPKGIQGY-HGADGISGNPGKIGPP-----GKQGLPGIRGGPGRT 1326
Query: 256 FGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLV 313
AGA G PGV G +G+PG PG I G G G+ G P K G
Sbjct: 1327 GLAGAPGP-PGVKGSSGLPGSPG-IQGPKGEQGLPGQPGIQG---------KRGHRGAQG 1375
Query: 314 PGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGAGIP--GAAVPGVVSPEAAAKAAAKA 370
GP PG+ G PG GV G+ G PG P A + G+ P+
Sbjct: 1376 DQGPCGDPGLKGQPGEYGVQGL----TGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNT 1431
Query: 371 AKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPE 430
G +G PT G G GF G G G G G PG G PG +
Sbjct: 1432 GPLGREGIIG----PTGRTGPRGEKGFR----GETGPQGPRGQPGPPGPPGAPGPRKQMD 1483
Query: 431 AQAAAAA 437
AA A
Sbjct: 1484 INAAIQA 1490
Score = 67.0 bits (162), Expect = 5e-11
Identities = 81/278 (29%), Positives = 99/278 (35%), Gaps = 25/278 (8%)
Query: 395 PGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAK--YGLVPGVGV-- 450
P G G PG AG+PG G G G+PG +P K K G PG V
Sbjct: 490 PKGDTGPPGPPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPG 549
Query: 451 ------APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAK 504
G+ PG+ G+ PG+ PG P G A IG G A
Sbjct: 550 EKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIP--GFAGNIGSPGYPGRQGLAGP 607
Query: 505 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 564
A +G+ PG +G G G+PG+ G G PG A
Sbjct: 608 EGNPGPKGAQGFIGS--PGEAGQLGPEG---ERGIPGIRGKKGFKGRQGFPGDFGDRGPA 662
Query: 565 KYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG-LGGLGV 623
+ PG++GG G G G+ G V GP A + GL G G G G
Sbjct: 663 GLDGS-PGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGT 721
Query: 624 GG-LGVPGVGGLGGI-----PPAAAAKAAKYGVAARPG 655
G LG PG G G PP K+ G PG
Sbjct: 722 AGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPG 759
Score = 55.8 bits (133), Expect = 1e-07
Identities = 90/327 (27%), Positives = 112/327 (34%), Gaps = 59/327 (18%)
Query: 19 SILHPSRPGGVPGAIPG----GVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPA 74
++L P P G PG + G PG Y G G P GL GA G P
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEPGAEGYK--GHVGVP------GLRGATGQQGPPGEPG 1249
Query: 75 VTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVK--PGKV- 131
L ++ K A +G G+PG+ GL G G+ PGK+
Sbjct: 1250 DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIG 1309
Query: 132 -PGV-GLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGP- 188
PG GLPG+ G PG TG P PGV G+ +G+PG GP
Sbjct: 1310 PPGKQGLPGIRGG---PGR------------TGLAGAPGPPGVKGS-SGLPGSPGIQGPK 1353
Query: 189 -QPGVPLGYPIKAPKLPGGYGLPYTTGKLPY--GYGPGGVAGAAGKAGYPTGTGVGPQAA 245
+ G+P G P GK + G G G G G P GV Q
Sbjct: 1354 GEQGLP--------------GQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGV--QGL 1397
Query: 246 AAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAK 305
K G AG++ G+ G G I G +G +
Sbjct: 1398 TGFQGFPGPKGPEGDAGIV------GISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGE 1451
Query: 306 YGAAAGLVPGGPGFGPGVVGVPGAGVP 332
G P GP PG G PGA P
Sbjct: 1452 KGFRGETGPQGPRGQPGPPGPPGAPGP 1478
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.144 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,856,911
Number of Sequences: 37866
Number of extensions: 2919824
Number of successful extensions: 57450
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 971
Number of HSP's that attempted gapping in prelim test: 13416
Number of HSP's gapped (non-prelim): 12517
length of query: 677
length of database: 18,247,518
effective HSP length: 109
effective length of query: 568
effective length of database: 14,120,124
effective search space: 8020230432
effective search space used: 8020230432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.