Guide to the Human Genome
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Name: ELN Sequence: fasta or formatted (705aa) NCBI GI: 126352608
Description:

elastin isoform e precursor

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [692aa] elastin isoform c precursor
alt prot [724aa] elastin isoform a precursor
alt prot [711aa] elastin isoform d precursor
alt prot [677aa] elastin isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            21.4        151          10
 C cysteine            0.3          2           1
 D aspartate           0.1          1           1
 E glutamate           0.3          2           1
 F phenylalanine       2.1         15           1
 G glycine            29.6        209           3
 H histidine           0.1          1           1
 I isoleucine          2.4         17           1
 K lysine              4.7         33           1
 L leucine             6.7         47           5
 M methionine          0.1          1           1
 N asparagine          0.0          0           0
 P proline            12.6         89           2
 Q glutamine           1.0          7           1
 R arginine            1.1          8           1
 S serine              1.0          7           1
 T threonine           1.3          9           2
 V valine             12.9         91           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elastin isoform e precursor 
ELN                   0.992   elastin isoform a precursor 
ELN                   0.962   elastin isoform c precursor 
ELN                   0.953   elastin isoform d precursor 
ELN                   0.946   elastin isoform b precursor 
COL1A1                0.118   alpha 1 type I collagen preproprotein 
COL3A1                0.112   collagen type III alpha 1 preproprotein 
COL4A1                0.109   alpha 1 type IV collagen preproprotein 
COL1A2                0.107   alpha 2 type I collagen 
COL4A5                0.107   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.106   type IV collagen alpha 5 isoform 3 precursor 
COL2A1                0.106   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.106   collagen, type II, alpha 1 isoform 2 precursor [Hom...
COL4A5                0.106   type IV collagen alpha 5 isoform 2 precursor 
COL4A2                0.105   alpha 2 type IV collagen preproprotein 
COL5A2                0.096   alpha 2 type V collagen preproprotein 
COL4A6                0.095   type IV alpha 6 collagen isoform A precursor 
COL4A6                0.095   type IV alpha 6 collagen isoform B precursor 
COL8A2                0.093   collagen, type VIII, alpha 2 
COL8A1                0.091   alpha 1 type VIII collagen precursor 
COL8A1                0.091   alpha 1 type VIII collagen precursor 
COL22A1               0.087   collagen, type XXII, alpha 1 
COL16A1               0.087   alpha 1 type XVI collagen precursor 
COL7A1                0.086   alpha 1 type VII collagen precursor 
COL24A1               0.086   collagen, type XXIV, alpha 1 
COL10A1               0.085   type X collagen alpha 1 precursor 
COL5A3                0.084   collagen, type V, alpha 3 preproprotein 
COL4A4                0.084   alpha 4 type IV collagen precursor 
COL11A1               0.083   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.083   alpha 1 type XI collagen isoform C preproprotein [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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