Guide to the Human Genome
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Name: ELN Sequence: fasta or formatted (724aa) NCBI GI: 126352440
Description:

elastin isoform a precursor

Referenced in:

Extracellular Matrix
Additional Protein Modifications

Other entries for this name:
alt prot [692aa] elastin isoform c precursor
alt prot [711aa] elastin isoform d precursor
alt prot [705aa] elastin isoform e precursor
alt prot [677aa] elastin isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            22.2        161          10
 C cysteine            0.3          2           1
 D aspartate           0.1          1           1
 E glutamate           0.3          2           1
 F phenylalanine       2.2         16           1
 G glycine            29.1        211           3
 H histidine           0.1          1           1
 I isoleucine          2.3         17           1
 K lysine              4.8         35           1
 L leucine             6.5         47           5
 M methionine          0.1          1           1
 N asparagine          0.0          0           0
 P proline            12.4         90           2
 Q glutamine           1.1          8           1
 R arginine            1.1          8           1
 S serine              1.0          7           1
 T threonine           1.4         10           2
 V valine             12.7         92           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elastin isoform a precursor 
ELN                   0.968   elastin isoform e precursor 
ELN                   0.962   elastin isoform d precursor 
ELN                   0.930   elastin isoform c precursor 
ELN                   0.914   elastin isoform b precursor 
COL1A1                0.117   alpha 1 type I collagen preproprotein 
COL2A1                0.110   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.110   collagen, type II, alpha 1 isoform 2 precursor [Hom...
COL4A1                0.110   alpha 1 type IV collagen preproprotein 
COL3A1                0.110   collagen type III alpha 1 preproprotein 
COL4A6                0.101   type IV alpha 6 collagen isoform A precursor 
COL4A6                0.101   type IV alpha 6 collagen isoform B precursor 
COL1A2                0.100   alpha 2 type I collagen 
COL4A5                0.100   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.100   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.100   type IV collagen alpha 5 isoform 3 precursor 
COL4A2                0.095   alpha 2 type IV collagen preproprotein 
COL5A2                0.092   alpha 2 type V collagen preproprotein 
COL10A1               0.088   type X collagen alpha 1 precursor 
COL22A1               0.087   collagen, type XXII, alpha 1 
COL5A3                0.085   collagen, type V, alpha 3 preproprotein 
COL8A1                0.085   alpha 1 type VIII collagen precursor 
COL8A1                0.085   alpha 1 type VIII collagen precursor 
COL11A1               0.084   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.084   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.084   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL16A1               0.084   alpha 1 type XVI collagen precursor 
COL7A1                0.083   alpha 1 type VII collagen precursor 
COL8A2                0.082   collagen, type VIII, alpha 2 
COL5A1                0.082   alpha 1 type V collagen preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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