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Search of human proteins with 126352446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|126352446 elastin isoform d precursor [Homo sapiens]
(711 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|126352446 elastin isoform d precursor [Homo sapiens] 1420 0.0
gi|126352440 elastin isoform a precursor [Homo sapiens] 1393 0.0
gi|126352322 elastin isoform c precursor [Homo sapiens] 1375 0.0
gi|126352608 elastin isoform e precursor [Homo sapiens] 1347 0.0
gi|126352700 elastin isoform b precursor [Homo sapiens] 1330 0.0
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 180 4e-45
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 176 7e-44
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 176 9e-44
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 169 8e-42
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 169 8e-42
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 169 8e-42
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ... 167 2e-41
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s... 167 2e-41
gi|48762934 alpha 2 type I collagen [Homo sapiens] 166 5e-41
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 162 1e-39
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 162 1e-39
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 160 4e-39
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 153 5e-37
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 150 5e-36
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 145 1e-34
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 145 1e-34
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 144 4e-34
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens] 143 5e-34
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 141 2e-33
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 141 2e-33
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 141 2e-33
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 141 2e-33
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 140 4e-33
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 139 9e-33
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 139 1e-32
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 1420 bits (3677), Expect = 0.0
Identities = 711/711 (100%), Positives = 711/711 (100%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP
Sbjct: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
Query: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
Query: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
Query: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
Query: 661 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 711
GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 661 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 711
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 1393 bits (3606), Expect = 0.0
Identities = 706/729 (96%), Positives = 706/729 (96%), Gaps = 23/729 (3%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 175
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 176 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 235
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 236 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 295
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 296 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 355
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 356 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 415
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP
Sbjct: 416 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 475
Query: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 476 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 535
Query: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 536 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 595
Query: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 596 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 655
Query: 661 GVPGVGGLGGIPPAAAAKAAKY------------------GVAARPGFGLSPIFPGGACL 702
GVPGVGGLGGIPPAAAAKAAKY GVAARPGFGLSPIFPGGACL
Sbjct: 656 GVPGVGGLGGIPPAAAAKAAKYGAAGLGGVLGGAGQFPLGGVAARPGFGLSPIFPGGACL 715
Query: 703 GKACGRKRK 711
GKACGRKRK
Sbjct: 716 GKACGRKRK 724
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 1375 bits (3558), Expect = 0.0
Identities = 692/711 (97%), Positives = 692/711 (97%), Gaps = 19/711 (2%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY GLVP
Sbjct: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-------------------GLVP 461
Query: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 462 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 521
Query: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 522 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 581
Query: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 582 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 641
Query: 661 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 711
GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 642 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 692
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 1347 bits (3487), Expect = 0.0
Identities = 687/729 (94%), Positives = 687/729 (94%), Gaps = 42/729 (5%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 175
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 176 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 235
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 236 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 295
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 296 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 355
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 356 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 415
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY GLVP
Sbjct: 416 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-------------------GLVP 456
Query: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 457 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 516
Query: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 517 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 576
Query: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 577 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 636
Query: 661 GVPGVGGLGGIPPAAAAKAAKY------------------GVAARPGFGLSPIFPGGACL 702
GVPGVGGLGGIPPAAAAKAAKY GVAARPGFGLSPIFPGGACL
Sbjct: 637 GVPGVGGLGGIPPAAAAKAAKYGAAGLGGVLGGAGQFPLGGVAARPGFGLSPIFPGGACL 696
Query: 703 GKACGRKRK 711
GKACGRKRK
Sbjct: 697 GKACGRKRK 705
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 1330 bits (3443), Expect = 0.0
Identities = 677/711 (95%), Positives = 677/711 (95%), Gaps = 34/711 (4%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP ALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP----------ALGPGG 50
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 51 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 110
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 111 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 165
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 166 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 225
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 226 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 285
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 286 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 345
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 346 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 405
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY GLVP
Sbjct: 406 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-------------------GLVP 446
Query: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 447 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 506
Query: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 507 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 566
Query: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 567 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 626
Query: 661 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 711
GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 627 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 677
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 180 bits (457), Expect = 4e-45
Identities = 241/739 (32%), Positives = 271/739 (36%), Gaps = 116/739 (15%)
Query: 23 PSRPG--GVPGAI-PGGVPGGVFYPGAG--LGALGG-GALGPGGKPLKPVPGGLAGAGLG 76
P PG G PG + P G+PG PGA GA G GA G G P P G G
Sbjct: 289 PGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPG---- 344
Query: 77 AGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQ 136
FPGA+ G A + ++ G+ G PG G +A P+
Sbjct: 345 ----------FPGAVGAKGEAGPQGP-RGSEGPQGVRGEPGPPGPAGAAGPA------GN 387
Query: 137 PGAGVKPGKVPGVGLPGVYPGGVLPGARFP----GVGVLPGVPTGAGVKPKAPGVGGAFA 192
PGA +PG G PG+ PGAR P G G PG P G +P APG G
Sbjct: 388 PGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPG-PKGNSGEPGAPGSKGDTG 446
Query: 193 GIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTG 252
GP G P P G K G G P TG LP GP G G G G+P
Sbjct: 447 AKGEPGPVGVQGPPGPAGEEGKR----GARGEPGPTG-LP---GPPGERGGPGSRGFPGA 498
Query: 253 TGV----GPQAAAAAAAKAAAKFGAGAAGV-----LPGVGG-AGVPGVPG---------- 292
GV GP + A K G AG LPG G G PG PG
Sbjct: 499 DGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP 558
Query: 293 ----------AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPG-FGP-GVV 339
PG G AGV G P AA KA + G VPG PG GP G
Sbjct: 559 AGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERG-----VPGPPGAVGPAGKD 613
Query: 340 GVPGA-GVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGG 398
G GA G PG P AG PG G+ P A K + G +G G
Sbjct: 614 GEAGAQGPPGPAGPAGERGEQGPAGSPG--FQGLPGPAGPPGEAGKPGEQGVPGDLGAPG 671
Query: 399 IPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG 458
P+ G GFPG GV G PG AG G G PG G G +P A + A +
Sbjct: 672 -PSGARGERGFPGER-GVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGM 729
Query: 459 VGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGV----GLAPGVGVAPGVGV 514
G AA +PG G G +PG GL +G PG
Sbjct: 730 PGERGAAG------------LPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIG-PPGPAG 776
Query: 515 APG----VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGV 569
APG G + GP G A + A GA G PG G G
Sbjct: 777 APGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKG 836
Query: 570 GAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPA 629
AG PG AG PG GA AK A+ A PG G GA G VG PG AGP
Sbjct: 837 DAGPPGPAGPAGPPGPIGNVGA-PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPP 895
Query: 630 AAAAAAKAAAKAAQFGLVGAAGL-GGLG-------VGGLGVPGVGGLGGIP--PAAAAKA 679
A G G AG G +G G G PG G G P P A
Sbjct: 896 GPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIA 955
Query: 680 AKYGVAARPGFGLSPIFPG 698
+ GV PG FPG
Sbjct: 956 GQRGVVGLPGQRGERGFPG 974
Score = 167 bits (423), Expect = 3e-41
Identities = 226/714 (31%), Positives = 253/714 (35%), Gaps = 85/714 (11%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
PS P G+PG P G PG + G GA GP G P P G G AG
Sbjct: 183 PSGPRGLPG--PPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR 240
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVK 142
P P A K G G+ G G A P+ P PG
Sbjct: 241 PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKG---DAGPAGPKGEPGSPGENGA 297
Query: 143 PGKVPGVGLPGVY--PGGVLP-GAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIP 195
PG++ GLPG PG P GAR G PG PTG P PG GA
Sbjct: 298 PGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPG-PTGPAGPPGFPGAVGAKGEAG 356
Query: 196 GVGPFGGPQPGVPLGYPIKAPKLPGGY----GLPYTTGKLPYGYGPGGVAGAAGKAGYPT 251
GP G P G P P P G G P G+ P G G G AG G+P
Sbjct: 357 PQGPRGSEGPQGVRGEP--GPPGPAGAAGPAGNPGADGQ-PGAKGANGAPGIAGAPGFPG 413
Query: 252 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 311
G P K +G G G G G PG + GV P A
Sbjct: 414 ARG--PSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPV-------GVQGPPGPAG 464
Query: 312 AAAAAKAAKYGAAAGLVPGGPGF--GPGVVGVPGA-GVPGV-------GVPG-AGIPVVP 360
A GL PG PG GPG G PGA GV G G PG AG P
Sbjct: 465 EEGKRGARGEPGPTGL-PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSP 523
Query: 361 G-------AGIPGA----AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGF 409
G AG+PGA PG P+ A + G RPG P GA G
Sbjct: 524 GEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDG-RPG------PPGPPGARGQ 576
Query: 410 PGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA-AAAK 468
G +G G G AG PG G GV G PG + P + A G PA +
Sbjct: 577 AGV-MGFPGPKGAAGEPGKAGERGVPGPPG-AVGPAGKDGEAGAQGPPGPAGPAGERGEQ 634
Query: 469 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPG 527
A + F +PG PG PG PG APG A G PG GV GP
Sbjct: 635 GPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPA 694
Query: 528 GVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA 587
G A + AK AG PG G PGL G+PG AG+PG
Sbjct: 695 GPRGANGAPGNDGAKGD--------AGAPGAPGSQGAPGL---QGMPGERGAAGLPGPKG 743
Query: 588 VPGALA--AAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
G A + V G+ G +G G G PG +GP+ A A G
Sbjct: 744 DRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRG 803
Query: 646 LVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGG 699
G G G G G G G G P A AK G A PG P P G
Sbjct: 804 EPGPPGPAGF-AGPPGADGQPGAKGEPGDAGAK----GDAGPPG----PAGPAG 848
Score = 165 bits (418), Expect = 1e-40
Identities = 224/678 (33%), Positives = 249/678 (36%), Gaps = 88/678 (12%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAG-----AGLGA 77
P P G PG G+PG PG P G P P P GL G G
Sbjct: 122 PRGPAGPPGR--DGIPGQPGLPG------------PPGPPGPPGPPGLGGNFAPQLSYGY 167
Query: 78 GLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQP 137
+ ++ PG + P G A G G PG G ++ P P P
Sbjct: 168 DEKSTGGISVPGPMGPSGPRGLPGP-PGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPP 226
Query: 138 GAGVKPGKVPGVGLPGVY-PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG 196
G G+ G PG P G PG LPG+ G G+ GA
Sbjct: 227 GKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFS----GLDGAKGDAGP 282
Query: 197 VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVA---GAAGKAGYPTGT 253
GP G +PG P AP G GLP G+ P GP G GA G AG P T
Sbjct: 283 AGPKG--EPGSP--GENGAPGQMGPRGLPGERGR-PGAPGPAGARGNDGATGAAGPPGPT 337
Query: 254 GVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAA 313
GP AK AG G G GV G PG PG G AG PA A
Sbjct: 338 --GPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGP-PGPAGAAG---PAGNPGAD 391
Query: 314 AAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG----AGIPVVPGA-GIPGA- 367
A A G + G PGF PG G G PG G PG +G P PG+ G GA
Sbjct: 392 GQPGAKGANGAPG-IAGAPGF-PGARGPSGPQGPG-GPPGPKGNSGEPGAPGSKGDTGAK 448
Query: 368 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP-----TYGVGAGGFPGFGVGVGGIPGV 422
PG V + A + K GAR G G+P G G+ GFPG GV G G
Sbjct: 449 GEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG-ADGVAGPKGP 507
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 482
AG G G G G PG P AK G+P A PG
Sbjct: 508 AGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGP 567
Query: 483 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGV--AAAAKSAAKV 539
PG GV PG G PG GV PG +GP G A A+
Sbjct: 568 PGPPGARGQAGVMGFPG---PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGP 624
Query: 540 AAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 599
A A R G AG PG G+PG AG PG AG PG VPG L
Sbjct: 625 AGPAGERGEQG-PAGSPGF---QGLPG---PAGPPG---EAGKPGEQGVPGDL------- 667
Query: 600 YGAAVPGVLGGLGALGGVGIPG--GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGL-GGL 655
G G GA G G PG GV G GPA A A G GA G G
Sbjct: 668 ------GAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQ 721
Query: 656 GVGGL-GVPGVGGLGGIP 672
G GL G+PG G G+P
Sbjct: 722 GAPGLQGMPGERGAAGLP 739
Score = 159 bits (402), Expect = 8e-39
Identities = 232/765 (30%), Positives = 264/765 (34%), Gaps = 146/765 (19%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA--GLGALGG-------GALGPGGKPLK------PVP 67
P PGG PG P G G PG+ GA G G GP G+ K P P
Sbjct: 420 PQGPGGPPG--PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGP 477
Query: 68 GGLAGAGL---GAGLGAFPAVTFPGALVPGGVADAAAAYKAA--KAGAGLGGVPGVGGL- 121
GL G G G FP G P G A + A K G G PG GL
Sbjct: 478 TGLPGPPGERGGPGSRGFPGAD--GVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535
Query: 122 GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGAR-------FPGVGVLPGV 174
G PG+ P G PG G PG PG PGAR FPG G
Sbjct: 536 GAKGLTGSPGSPGPDGKTG-PPGPAGQDGRPGP-PGP--PGARGQAGVMGFPGPKGAAGE 591
Query: 175 PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPLGY-----PIKAPK---LPGGYGL 224
P AG + P PG G G G P P P G P +P LPG G
Sbjct: 592 PGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 651
Query: 225 PYTTGK-----LPYGYGPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKFG 272
P GK +P G G +GA G+ G+P GV GP+ A A AK
Sbjct: 652 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGD 711
Query: 273 AGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL 327
AGA G G G+ G+PG +PG G G P A + K G +
Sbjct: 712 AGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPG--KDGVRGLTGPI 769
Query: 328 VPGGPGFGPGVVGVPGA----------GVPG----VGVPG-AGIPVVPGA-------GIP 365
P GP PG G G G PG G PG AG PGA G P
Sbjct: 770 GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 366 G-------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGG 418
G A PG P GA+ G G P GA GFPG G G
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP----GATGFPG-AAGRVG 884
Query: 419 IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGL 478
PG +G G G PG G G G P + A + + G P A + + A
Sbjct: 885 PPGPSGNAGPPGPPGPAGKEG-GKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGAD--- 940
Query: 479 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAA 537
G APG G+ GV PG G PG PG GP G +
Sbjct: 941 --GPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGER---- 994
Query: 538 KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKA 597
G PG +G PGL AG PG G PG PG +
Sbjct: 995 ----------------GPPG---PMGPPGL---AGPPGESGREGAPGAEGSPGR-DGSPG 1031
Query: 598 AKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-- 655
AK G G GA G G PG V AG + A A G VGA G G
Sbjct: 1032 AKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQG 1091
Query: 656 ---------GVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPG 689
G G+ G G G+ PP + G + G
Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASG 1136
Score = 145 bits (367), Expect = 1e-34
Identities = 216/716 (30%), Positives = 242/716 (33%), Gaps = 141/716 (19%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--------GALGPGGKPLKPVPGGLAGA 73
P+ P G PG G PG PGA GL G G GP G+ +P P G GA
Sbjct: 516 PAGPKGSPGE--AGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGA 573
Query: 74 GLGAGLGAFP----AVTFPGAL----VPGGVADAAAAYKAAKAGAGLGGVPGVGG----- 120
AG+ FP A PG VPG A K +AGA G PG G
Sbjct: 574 RGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQ--GPPGPAGPAGER 631
Query: 121 --LGVSAAPSVPGAVVPQ--PGAGVKPGK--VPG-VGLPGVYPGGVLPGARFPGVGVLPG 173
G + +P G P PG KPG+ VPG +G PG P G FPG + G
Sbjct: 632 GEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG--PSGARGERGFPGERGVQG 689
Query: 174 VPTGAGVK-----------------PKAPGVGGA-----------FAGIPG--------- 196
P AG + P APG GA AG+PG
Sbjct: 690 PPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG 749
Query: 197 ----------------VGPFGGPQP-GVPLGYPIKAPKLPGG----YGLPYTTGKLPYGY 235
GP G P P G P P P G G P G+ P
Sbjct: 750 PKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGE-PGPP 808
Query: 236 GPGGVAGAAGKAGYPTGTG----------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA 285
GP G AG G G P G GP A A GA G G A
Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSA 868
Query: 286 GVPGVPGAIPGIGGIAGVGTPAA-AAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA 344
G PG G PG G G P+ A A K G GP PG VG PG
Sbjct: 869 GPPGATG-FPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGP 927
Query: 345 GVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
P AG PGA P A PG P+ A G R G G+P
Sbjct: 928 PGP------AGEKGSPGADGP-AGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLP---- 976
Query: 405 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA 464
G G PG G G G G PG G PG+ G PG + A A+ + G+P A
Sbjct: 977 GPSGEPG-KQGPSGASGERGPPGPMGPPGLAGPPG---ESGREGAPGAEGSPGRDGSPGA 1032
Query: 465 AAAKAAAKAAQFGLVPGVGVAPG-VGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
+ A PG APG VG A G G A G A VG G A
Sbjct: 1033 KGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPA---GPAGPVGPVGARGPAGP 1089
Query: 524 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-----GIPGLGVGVGVPGLGVGAGVPGLGV 578
GP G K R +GL G PG G G G PG
Sbjct: 1090 QGPRGDKGETGEQGDRGIKGH-RGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAG 1148
Query: 579 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAA 634
G G +PG + PG G G G VG PG GP +A
Sbjct: 1149 APGKDGLNGLPGPIGP----------PGPRGRTGDAGPVGPPGPPGPPGPPGPPSA 1194
Score = 110 bits (274), Expect = 6e-24
Identities = 167/552 (30%), Positives = 193/552 (34%), Gaps = 84/552 (15%)
Query: 161 PGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPG 220
PGA P P P G+ P G GP G P P G +PG
Sbjct: 82 PGAEVPEGECCPVCPDGSE-SPTDQETTGVEGPKGDTGPRGPRGPAGPPG----RDGIPG 136
Query: 221 GYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLP 280
GLP GP G G G G G PQ + K+
Sbjct: 137 QPGLP----------GPPGPPGPPGPPGL--GGNFAPQLSYGYDEKST------------ 172
Query: 281 GVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVV 339
GG VPG P G G+ G G P + + GA+ + P GP PG
Sbjct: 173 --GGISVPG-PMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKN 229
Query: 340 GVPG-AGVPG----VGVPG-AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARP 392
G G AG PG G PG G +PG AG+PG S AK A A P
Sbjct: 230 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEP 289
Query: 393 G-VGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAA 451
G G G P +G G PG G G PG AG G G G G PG
Sbjct: 290 GSPGENGAPGQ-MGPRGLPG-ERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPG 347
Query: 452 AKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG 511
A AK G ++ PG A G PG PG A G APG
Sbjct: 348 AVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPG---AKGANGAPG 404
Query: 512 VGVAPGVGVAPG----IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPG 566
+ APG A G GPGG ++ + A + GA G PG VGV G
Sbjct: 405 IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPG---SKGDTGAKGEPG---PVGVQG 458
Query: 567 LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG-----GVGIPG 621
AG G G PG +PG PG GG G+ G GV P
Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGP-------------PGERGGPGSRGFPGADGVAGPK 505
Query: 622 GVVG----AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAA 677
G G GPA + A + + GL GA GL G G PG G G PP A
Sbjct: 506 GPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL----TGSPGSPGPDGKTG-PPGPAG 560
Query: 678 KAAKYGVAARPG 689
+ + G PG
Sbjct: 561 QDGRPGPPGPPG 572
Score = 109 bits (273), Expect = 8e-24
Identities = 158/456 (34%), Positives = 172/456 (37%), Gaps = 68/456 (14%)
Query: 26 PGGVPGAIPGGVPG--GVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P G PG P G PG G P G G GA G G+P P P G AG G
Sbjct: 768 PIGPPG--PAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ--- 822
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAG-AGLGGVPG-VGGLGVSAAPSVPGAVVPQPGAG 140
PGA G DA A A G AG G PG +G +G A G+ P PGA
Sbjct: 823 -----PGA--KGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGP-PGAT 874
Query: 141 VKPGKVPGVGLPGVYPGGVLPG-------------------ARFPGVGVLPGVPTGAGVK 181
PG VG PG PG A PG PG P AG K
Sbjct: 875 GFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEK 934
Query: 182 PKAPGVGGAFAGIPGV-GPFG-GPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLPYG 234
+PG G AG PG GP G Q GV +G P + P LPG G P G P G
Sbjct: 935 G-SPGADGP-AGAPGTPGPQGIAGQRGV-VGLPGQRGERGFPGLPGPSGEPGKQG--PSG 989
Query: 235 Y----GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGV 290
GP G G G AG P +G + A A GA G G AG PG
Sbjct: 990 ASGERGPPGPMGPPGLAGPPGESG--REGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGA 1047
Query: 291 PGA--IPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGV 346
PGA PG G AG G A A GA P GP G G G G+
Sbjct: 1048 PGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGI 1107
Query: 347 PGV-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVG 405
G G G P P G PG P S A + +A GA G+ G+P G
Sbjct: 1108 KGHRGFSGLQGPPGP-PGSPGEQGPSGASGPAGPRGPPGSA--GAPGKDGLNGLP----G 1160
Query: 406 AGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVG 441
G PG G G G G PG G PG G P G
Sbjct: 1161 PIGPPG-PRGRTGDAGPVGPPGPPGPPGPPGPPSAG 1195
Score = 84.0 bits (206), Expect = 5e-16
Identities = 122/376 (32%), Positives = 139/376 (36%), Gaps = 44/376 (11%)
Query: 23 PSRPGGVPGAI-----PG--------GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGG 69
P+ P G PG I PG G PG +PGA G +G GP G P P G
Sbjct: 843 PAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAA-GRVGPP--GPSGNAGPPGPPG 899
Query: 70 LAGAGLGAG-LGAFPAVTFPGALVPGGVADAAA--AYKAAKAGAGLGGVPGVGGL-GVSA 125
AG G G G PG + P G A A AG G PG G+ G
Sbjct: 900 PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG 959
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVY-PGGVLPGARFPGVGVLPGV--PTGAGVKP 182
+PG Q G PG G PG P G PG PG+ P G +
Sbjct: 960 VVGLPG----QRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 1015
Query: 183 KAPGVGGAFA--GIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGG 239
APG G+ G PG G G P P G P AP PG G +G G G
Sbjct: 1016 GAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAP-GAPGAPGPVGPAGKSGDR----GETG 1070
Query: 240 VAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIG 298
AG AG G G GPQ + + G G G G PG PG+ PG
Sbjct: 1071 PAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGS-PGEQ 1129
Query: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG----A 354
G +G PA +A A GL GP PG G G P VG PG
Sbjct: 1130 GPSGASGPAGPRGPPGSAGAPGKDGLNGL--PGPIGPPGPRGRTGDAGP-VGPPGPPGPP 1186
Query: 355 GIPVVPGAGIPGAAVP 370
G P P AG + +P
Sbjct: 1187 GPPGPPSAGFDFSFLP 1202
Score = 74.7 bits (182), Expect = 3e-13
Identities = 105/355 (29%), Positives = 121/355 (34%), Gaps = 39/355 (10%)
Query: 360 PGAGIP-GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGG 418
PGA +P G P V P+ + + P G P G G PG G
Sbjct: 82 PGAEVPEGECCP--VCPDGSESPTDQETTGVEGPKGDTG--PRGPRGPAGPPGRD----G 133
Query: 419 IPGVAGVPGVGGVPGVGGVPGVG--ISP-------EAQAAAAAKAAKYGVGTPAAAAAKA 469
IPG G+PG G PG G PG+G +P E + G P
Sbjct: 134 IPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPP 193
Query: 470 AAKAAQ-FGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG-VGVAPGIGPG 527
A Q F PG PG G PG PG G PG G GP
Sbjct: 194 GAPGPQGFQGPPGEPGEPGASGPMGPRGPPG---PPGKNGDDGEAGKPGRPGERGPPGPQ 250
Query: 528 GVAAAAKSAAKVAAKAQLRAAAGL--GAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 585
G +A K R +GL G G G PG G PG G+PG
Sbjct: 251 GARGLPGTAGLPGMKGH-RGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGE 309
Query: 586 GAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
PGA A G G GA G G PG AGP A A +A G
Sbjct: 310 RGRPGAPGPA----------GARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQG 359
Query: 646 LVGAAGLGGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 698
G+ G G+ G G PG G G P A + G PG +P FPG
Sbjct: 360 PRGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPG 413
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 176 bits (446), Expect = 7e-44
Identities = 222/706 (31%), Positives = 257/706 (36%), Gaps = 100/706 (14%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
P G PG P G PG +PG+ G GP G+P + P G G
Sbjct: 175 PAGPPG--PPGPPGTSGHPGSPGSP---GYQGPPGEPGQAGPSGPPGP------------ 217
Query: 86 TFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVPQPGAGVK 142
PGA+ P G A D + GL G PG+ G G+ P + G G +
Sbjct: 218 --PGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKG----HRGFDGR 271
Query: 143 PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFG 201
G+ G PG+ LPG PG G P G +P PG GA G G
Sbjct: 272 NGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERG-RPGLPGAAGARGNDGARGSDG 330
Query: 202 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAA 260
P P P PG G P + G G G AG+ G G P G GPQ
Sbjct: 331 QPGPPGP----------PGTAGFPGSPG----AKGEVGPAGSPGSNGAPGQRGEPGPQGH 376
Query: 261 AAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAK 320
A A G+ G +G AG+PG PG + G G A A + K
Sbjct: 377 AGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGK 436
Query: 321 YGAAAGLVPGGPGFGPGVVGVPGA----------GVPGV-GVPGA----GIPVVPGA--- 362
GA P G G+ GVPGA G PG G+PGA G P G
Sbjct: 437 NGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGP 496
Query: 363 -GIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPG--FG 413
GIPG P G P AA + + G G G+ G+P G G+ G PG
Sbjct: 497 NGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGS 556
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKA 473
G G PG G G G PGV G PG + A + G G P K
Sbjct: 557 QGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPG-PQGPPGKNGETG 615
Query: 474 AQFGLVP-GVGVAPGVGVAP---GVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGV 529
Q P G G G P G+ PG G PG PG G APG PGG
Sbjct: 616 PQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPG-APGGK 674
Query: 530 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVG---AGVPGLGVGAGVPGFG 586
A R GL AG PGL G G PG G AG PG AG PG
Sbjct: 675 GDAGAPGE--------RGPPGL-AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQ 725
Query: 587 AVPGALAAAKAAKYGAAVPGVLGGLGALGGV---GIPGGVVGAGPAAAAAAAKAAAKAAQ 643
+PG + G PG G G GG G+PG GP A +
Sbjct: 726 GMPG-------ERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGD 778
Query: 644 FGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
G GA GL G+ G G PG G G PP A G PG
Sbjct: 779 KGEGGAPGLPGI-AGPRGSPGERGETG-PPGPAGFPGAPGQNGEPG 822
Score = 164 bits (414), Expect = 3e-40
Identities = 237/740 (32%), Positives = 265/740 (35%), Gaps = 123/740 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
PS P G PGAI P AG G PG + L P P G+ G AG+ F
Sbjct: 211 PSGPPGPPGAIGPSGP-------AGKDGESGRPGRPGERGL-PGPPGIKGP---AGIPGF 259
Query: 83 PAVT----FPGALVPGGVADAAAAYKAAKAGAGLGGVPGV----GGLGVSAAPSVPGAVV 134
P + F G G A K G G PG G G P +PGA
Sbjct: 260 PGMKGHRGFDGRNGEKG-ETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAG 318
Query: 135 P-----------QPGAGVKPGKVPGVGLPG----VYPGGVLPGARFPGVGVLPGVPTGAG 179
QPG PG G PG V P G PG PG AG
Sbjct: 319 ARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAG 378
Query: 180 VK--PKAPGVGGA--------FAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTT 228
+ P PG+ G+ AGIPG G G P P G AP L GG G P
Sbjct: 379 AQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAG-ANGAPGLRGGAGEPGKN 437
Query: 229 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 288
G G G G G+AG P G A K + GA G+ G G P
Sbjct: 438 G----AKGEPGPRGERGEAGIP-----GVPGAKGEDGKDGSPGEPGANGLPGAAGERGAP 488
Query: 289 GV-----PGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVG 340
G P IPG G AG G P A AA + + G VPGGPG PG G
Sbjct: 489 GFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDG-----VPGGPGMRGMPGSPG 543
Query: 341 VPGA-GVPGVGVPG----AGIPVVPGAGIPGA--AVPGVVSPEAAAKAAAKAAKYGARPG 393
PG+ G P G PG +G P PG P V G P+ A K + G G
Sbjct: 544 GPGSDGKP--GPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG 601
Query: 394 VGVGGIPTYG--VGAGGFPGFGVGVGGIPGVAGVP---GVGGVPGVGGVPGVGISPEAQA 448
G G P G G PG G GG G G P G+ G+PG GG PG P
Sbjct: 602 PGPQGPPGKNGETGPQGPPG-PTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKP---- 656
Query: 449 AAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGV-GVAPGVGVAPGVGLA---- 503
K G P A K A A PG+ APG+ G A G G G A
Sbjct: 657 --GEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPG 714
Query: 504 -PGVGVAPGVGVAPGV-GVAPGIGPGGVAA--AAKSAAKVAAKAQLRAAAG-LG----AG 554
PG PG+ PG G GP G A V K R G +G AG
Sbjct: 715 PPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAG 774
Query: 555 IP---GLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL 611
P G G G+PG+ G PG G PG PGA PG G
Sbjct: 775 QPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGA-------------PGQNGEP 821
Query: 612 GALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLG 669
G G G PG GP A + A G G G G G G G PG GL
Sbjct: 822 GGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLP 881
Query: 670 GIPPAAAAKAAKYGVAARPG 689
G PP + G + PG
Sbjct: 882 G-PPGSNGNPGPPGPSGSPG 900
Score = 159 bits (402), Expect = 8e-39
Identities = 240/815 (29%), Positives = 272/815 (33%), Gaps = 153/815 (18%)
Query: 17 LLSILHPSRPGGVPGAIPGGVPGGVFYPG----------------AGLGALGG--GALGP 58
L+ P P G GA G+ GG PG AG+ + G G G
Sbjct: 409 LMGARGPPGPAGANGA--PGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGK 466
Query: 59 GGKPLKPVPGGLAGAGLGAGLGAFPAVT----FPGALVPGGV--ADAAAAYKAAKAGAGL 112
G P +P GL GA G F PG P G A A + A G
Sbjct: 467 DGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGR 526
Query: 113 GGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGV----GLPGVYPGGVLPGARFPGV 168
GVPG G G+ P PG PG+ KPG PG G PG PG P + PGV
Sbjct: 527 DGVPG--GPGMRGMPGSPGG----PGSDGKPGP-PGSQGESGRPGP-PGPSGPRGQ-PGV 577
Query: 169 GVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFG--------GPQ-PGVPLGY-------- 211
PG G APG G G G GP G GPQ P P G
Sbjct: 578 MGFPGPKGNDG----APGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTG 633
Query: 212 ---PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKA 267
P LPG G P GK P GP G AGA G G G G + A
Sbjct: 634 PPGPQGLQGLPGTGGPPGENGK-PGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAP 692
Query: 268 AAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-------------GTPAAAAAA 312
+ GAG G G G AG PG PGA PG+ G+ G G P A
Sbjct: 693 GLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGAD 752
Query: 313 AAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGV-------------GVPG-AGIP 357
K G + P GP PG G GA G+PG+ G PG AG P
Sbjct: 753 GVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFP 812
Query: 358 VVPGA----------GIPG----AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG 403
PG G PG PGV P + A G + G G G
Sbjct: 813 GAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPG----G 868
Query: 404 VGAGGFPGF--------------------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
GA GFPG G G PG AG G G PGV G G
Sbjct: 869 PGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQ 928
Query: 444 PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLA 503
P + + A+ G A A A +PG +PG G PG
Sbjct: 929 PGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGL 988
Query: 504 PGVGVAPGVGVAPGVGVAPG-------IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GI 555
G PG PG+ G G G+ S + + + GA G
Sbjct: 989 SGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGH 1048
Query: 556 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--AAKAAKYGAAVPGVLGGLGA 613
PG VG G G G AG PG GA + K G G G
Sbjct: 1049 PGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGH 1108
Query: 614 LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPP 673
G G PG GPA A + A G VG +G G G G PG G PP
Sbjct: 1109 RGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKD-GTSGHPGPIG----PP 1163
Query: 674 AAAAKAAKYGVAARPGFGLSPIFPG-----GACLG 703
+ G PG P PG G C G
Sbjct: 1164 GPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCG 1198
Score = 159 bits (401), Expect = 1e-38
Identities = 209/689 (30%), Positives = 242/689 (35%), Gaps = 118/689 (17%)
Query: 26 PGGVPGAI-PGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLGA 81
P G PG PGG G PG GL L G G G GKP +P P G AGA
Sbjct: 616 PQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGA-------- 667
Query: 82 FPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGV----------GGLGVSAAPSVPG 131
PGA PGG DA A + GL G PG+ GG G + P PG
Sbjct: 668 ------PGA--PGGKGDAGAP--GERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPG 717
Query: 132 AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGV-----PTGAGVKPKAPG 186
A PG PG+ G+G PG PG PG +PG PTG + P P
Sbjct: 718 AA-GTPGLQGMPGERGGLGSPGPKGDKGEPGG--PGADGVPGKDGPRGPTGP-IGPPGP- 772
Query: 187 VGGAFAGIPGVGPFGGPQPGVP-LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 245
AG PG GG PG+P + P +P G G P GP G GA G
Sbjct: 773 -----AGQPGDKGEGGA-PGLPGIAGPRGSPGERGETGPP----------GPAGFPGAPG 816
Query: 246 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT 305
+ G P G G K G GV GG+G G PG G G
Sbjct: 817 QNGEPGGKG--------ERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGG 868
Query: 306 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIP 365
P AA A G+ P GP PG G PG G PG+
Sbjct: 869 PGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPA-GNTGAPGS----------- 916
Query: 366 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
PGV P+ A + GA+ G G P G G G G G+ G G+
Sbjct: 917 ----PGVSGPKGDAGQPGEKGSPGAQ---GPPGAP----GPLGIAGI-TGARGLAGPPGM 964
Query: 426 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVA 485
PG G PG GV G P A + + G P A PG
Sbjct: 965 PGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGE---------PGRDGN 1015
Query: 486 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQ 544
PG PG +PG G +PG APG PG +GP G + + + A A
Sbjct: 1016 PGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAG-KSGDRGESGPAGPAG 1074
Query: 545 LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 604
AG G PG G G G G+ G PG PG+
Sbjct: 1075 APGPAG-SRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGS------------- 1120
Query: 605 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGV 662
PG G GA+G G G GP+ + G G G G G G
Sbjct: 1121 PGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGH 1180
Query: 663 PGVGGLGGIPPAAAAKAAKYGVAARPGFG 691
PG G G P A G AA G G
Sbjct: 1181 PGQPGPPGPPGAPGPCCGGVGAAAIAGIG 1209
Score = 125 bits (315), Expect = 1e-28
Identities = 160/531 (30%), Positives = 187/531 (35%), Gaps = 95/531 (17%)
Query: 203 PQPGVPLG-------YPIKAPKLP-------GGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
P P +P G P AP P G G P G +P G G+ G G G
Sbjct: 75 PNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPG-IPGRNGDPGIPGQPGSPG 133
Query: 249 YPTGTGV------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 302
P G+ GPQ + K G G+ G AG PG PG PG G
Sbjct: 134 SPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP-PGTSG--- 189
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGA 362
PG PG PG G PG PG P +
Sbjct: 190 -------------------------HPGSPG-SPGYQGPPGE--PGQAGP---------S 212
Query: 363 GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGIPTYGVGAG--GFPGF--GVGVG 417
G PG PG + P A ++ + G RPG G+ G P AG GFPG G
Sbjct: 213 GPPGP--PGAIGPSGPAGKDGESGRPG-RPGERGLPGPPGIKGPAGIPGFPGMKGHRGFD 269
Query: 418 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFG 477
G G G G G+ G G+PG +P A + G P AA A+ A
Sbjct: 270 GRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSD 329
Query: 478 LVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAA 537
PG PG PG +PG G +PG APG P GP G A A
Sbjct: 330 GQPGPPGPPGTAGFPG---SPGAKGEVGPAGSPGSNGAPGQRGEP--GPQGHAGAQGPPG 384
Query: 538 KVAAKAQLRAAAGLG----AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA 593
+G G PGL G PG G PGL GAG PG G
Sbjct: 385 PPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGE-P 443
Query: 594 AAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLG 653
+ + A +PGV G G G G P G GA AA + A G G AG
Sbjct: 444 GPRGERGEAGIPGVPGAKGEDGKDGSP-GEPGANGLPGAAGERGAP-----GFRGPAGPN 497
Query: 654 GL-----GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGG 699
G+ G G PG G P AA + + GV PG P PGG
Sbjct: 498 GIPGEKGPAGERGAPGPAG----PRGAAGEPGRDGVPGGPGMRGMPGSPGG 544
Score = 104 bits (259), Expect = 3e-22
Identities = 153/474 (32%), Positives = 167/474 (35%), Gaps = 70/474 (14%)
Query: 23 PSRPGGVPGAI-PGGVPG--GVFYPGAGLGALGG-GALGPGGKPLKP----VPGGLA--G 72
P P G PG GG PG G+ P G G G GP G P P PGG G
Sbjct: 769 PPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERG 828
Query: 73 AGLGAGLGAFPAVTFPGALVPGGVADAAA-------AYKAAKAGAGLGGVPGVGGL---- 121
A G G P V P PGG A + + G G G PG GL
Sbjct: 829 APGEKGEGGPPGVAGP----PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPP 884
Query: 122 GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPG--GVLPGARFPGVGVLPGV--PTG 177
G + P PG PG PG G PG PG G A PG PG P G
Sbjct: 885 GSNGNPGPPGPS-GSPGKDGPPGPAGNTGAPGS-PGVSGPKGDAGQPGEKGSPGAQGPPG 942
Query: 178 AGVKPKAPGVGGA--FAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG 234
A G+ GA AG PG+ GP G P P G K PG GL G
Sbjct: 943 APGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGK----PGANGLSGERGPP--- 995
Query: 235 YGPGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGA 293
GP G+ G AG AG P G G K G G G G PG PG
Sbjct: 996 -GPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGP 1054
Query: 294 IPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGV-GV 351
+ G G A A A A GA P GP G G GA G+ G G
Sbjct: 1055 VGPAGKSGDRGESGPAGPAGAPGPAGSRGAPG---PQGPRGDKGETGERGAAGIKGHRGF 1111
Query: 352 PG-AGIPVVPG-AGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP-------- 400
PG G P PG AG GA PG P + K G G G P
Sbjct: 1112 PGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGE 1171
Query: 401 TYGVGAGGFPGF----------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G+ G PG G GG+ G A + G+GG G P G P
Sbjct: 1172 RGSEGSPGHPGQPGPPGPPGAPGPCCGGV-GAAAIAGIGGEKAGGFAPYYGDEP 1224
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 176 bits (445), Expect = 9e-44
Identities = 240/810 (29%), Positives = 304/810 (37%), Gaps = 174/810 (21%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPG--GVPGAI----PGGVPGGVFYPGA---------- 46
G+T A PG HP PG G PG++ G PGGV +PG+
Sbjct: 553 GMTGRAGSPG------RDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPP 606
Query: 47 GLGALGG----------------GALGPGGKPLK--PVPGGLAGAGLGAGLGAFPAVT-- 86
G G G G GP G+P K P+PG GL G FP
Sbjct: 607 GYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPG-FPGPQGD 665
Query: 87 --FPGALVPGGVADAAAAYKAAKAGAGLGGVPGV-------GGLGVSAAPSVPG--AVVP 135
FPG PG + G G G PG G +G P PG +
Sbjct: 666 RGFPGT--PGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPG 723
Query: 136 QPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFA--G 193
PG + G+ PGVGLPG+ LPG PG+ PG GV P PG GA G
Sbjct: 724 NPGVQGQKGE-PGVGLPGLKG---LPG--LPGIPGTPGEKGSIGV-PGVPGEHGAIGPPG 776
Query: 194 IPGV----GPFGGP----QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 245
+ G+ GP G P PGVP P A PGG G P +G P G+ G G
Sbjct: 777 LQGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSG-------PPGIKGEKG 829
Query: 246 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGGIAGVG 304
G+P GP+ A +G G LPG GA G+PG PG+ +G + G
Sbjct: 830 FPGFPGLDMPGPKGDKGAQGLPGITGQSGLPG-LPGQQGAPGIPGFPGSKGEMGVMGTPG 888
Query: 305 TPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGVGVPGAGIPVVPGA- 362
P + A + G GP PG+ G G G+P G PG+ V G+
Sbjct: 889 QPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLP--GKPGSMDKVDMGSM 946
Query: 363 ----------------------GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP 400
G PG PGV + A + + G + G+ G P
Sbjct: 947 KGQKGDQGEKGQIGPIGEKGSRGDPG--TPGVPGKDG---QAGQPGQPGPKGDPGISGTP 1001
Query: 401 TYGVGAGGFPG-----FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAA 455
GA G PG G+G+ G PG GVPG+ G G G+PG + +A
Sbjct: 1002 ----GAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPG----DKGAKGEKGQAG 1053
Query: 456 KYGVGTPAAAAAKAAAKAAQFGLVPG-------VGVAPGVGVAPGVGVAPG-VGL--APG 505
G+G P K A F PG +G+ PG+ +PG+ +PG VG +PG
Sbjct: 1054 PPGIGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGI-PGMPGSPGLKGSPGSVGYPGSPG 1112
Query: 506 VGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGV 564
+ G PG+ PG+ G G+ K G PG G+
Sbjct: 1113 LPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQK-----------GEPG---SDGI 1158
Query: 565 PGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVV 624
PG G PGL G G PGF PGA K +K PG+ G G G G G +
Sbjct: 1159 PGSAGEKGEPGL-PGRGFPGF---PGA-KGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMG 1213
Query: 625 GAGPAAAAAAAKAAAKAAQ-----FGLVGAAGLGGLGVGGLGVPGVGGLGGI-------- 671
GP + A + G G GL GL G +G PG+ G+ G+
Sbjct: 1214 PPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGL-PGPMGPPGLPGIDGVKGDKGNPG 1272
Query: 672 ---PPAAAAKAAKYGVAARPGFGLSPIFPG 698
P G PG G SP G
Sbjct: 1273 WPGAPGVPGPKGDPGFQGMPGIGGSPGITG 1302
Score = 172 bits (437), Expect = 7e-43
Identities = 228/733 (31%), Positives = 290/733 (39%), Gaps = 102/733 (13%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLG 80
P RPG G+PG GV G PG GL PG K L +PG G +G
Sbjct: 713 PGRPGFNGLPGN--PGVQGQKGEPGVGL---------PGLKGLPGLPGIPGTPGEKGSIG 761
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAG 140
GA+ P G+ G G PGV G+G A PG P PG
Sbjct: 762 VPGVPGEHGAIGPPGL-QGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGP-PGLS 819
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPG--- 196
PG G PG +PG +PG + G LPG+ TG P PG GA GIPG
Sbjct: 820 GPPGIKGEKGFPG-FPGLDMPGPKGDKGAQGLPGI-TGQSGLPGLPGQQGA-PGIPGFPG 876
Query: 197 ----VGPFGGP-QPGVPLGYPIKAPKLPG---GYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
+G G P QPG P P+ AP LPG +G P ++G G G+ G G G
Sbjct: 877 SKGEMGVMGTPGQPGSP--GPVGAPGLPGEKGDHGFPGSSGPR----GDPGLKGDKGDVG 930
Query: 249 YPTGTGVGPQAAAAAAAKAAAKFGA-GAAGVLPGVGGAGVPGVPGAIPGIGGIAGV---- 303
P G + + G G G + G G PG PG +PG G AG
Sbjct: 931 LPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPG-VPGKDGQAGQPGQP 989
Query: 304 ---GTPAAAAAAAAAAKAAKYGAAAGL-VPGGPGFGPGVVGVPGA-GVPGV-GVPGA--- 354
G P + A G+ G+ +PG PG GV G+PG G PG+ G GA
Sbjct: 990 GPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG-EKGVPGIPGPQGSPGLPGDKGAKGE 1048
Query: 355 -GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTY-----GVGAGG 408
G PG GIPG + G + A + G + +G+ G+P G+ G
Sbjct: 1049 KGQAGPPGIGIPG--LRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVG 1106
Query: 409 FPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAK 468
+PG G+ G G G+PG+ G+PGV G G+ +P A K G P +A K
Sbjct: 1107 YPG-SPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEK 1165
Query: 469 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG----VGVAPGVGVAPGI 524
G PG A G + G PG+ +PG+ + G +G PG PG+
Sbjct: 1166 GEPGLPGRGF-PGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMG-PPGPQGQPGL 1223
Query: 525 --GPGGVAAAAKSAAKVAAKAQLRAAAG-LGA-GIPGLGVGVGVPGLGVGAGVPGLGVGA 580
PG K + L G +G G+PG+ G G G PG+
Sbjct: 1224 PGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPK 1283
Query: 581 GVPGFGAVPG-----ALAAAKAAKYGAAVPGVLG--GLGALGGV-------GIPGGVVGA 626
G PGF +PG + +K VPG G GL L G+ G+PG
Sbjct: 1284 GDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGLP 1343
Query: 627 GPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL----GVPGVGGLGGIPPAAAAKAAK 681
GP + GL G G GL G+ GL G GV GL GIP
Sbjct: 1344 GPPGPPGPYDII--KGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVGIP--------- 1392
Query: 682 YGVAARPGFGLSP 694
G PGF +P
Sbjct: 1393 -GPPGIPGFDGAP 1404
Score = 155 bits (393), Expect = 9e-38
Identities = 215/696 (30%), Positives = 260/696 (37%), Gaps = 143/696 (20%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTF 87
G PG P G+PG V PG G G G G P P GL+G G FP F
Sbjct: 782 GEPG--PPGLPGSVGSPGVP----GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPG--F 833
Query: 88 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPG--------AVVPQPG 138
PG +PG D K A+ G+ G G+ GL G AP +PG V+ PG
Sbjct: 834 PGLDMPGPKGD-----KGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPG 888
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVG----GAFAG 193
PG V GLPG PG+ P G L G G+ K + G+ G
Sbjct: 889 QPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKG 948
Query: 194 IPG-------VGPFGGP----QPGVPLGYPIK-----APKLPGGYGLPYTTGK--LPYGY 235
G +GP G PG P G P K P PG G P +G P
Sbjct: 949 QKGDQGEKGQIGPIGEKGSRGDPGTP-GVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLP 1007
Query: 236 GPGGVAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVP 291
GP G G G G P GV GPQ + AK G AG PG+G +PG+
Sbjct: 1008 GPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGP-PGIG---IPGLR 1063
Query: 292 GAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF--GPGVVGVPGA-GVP 347
G G GIAG G+P K K +PG PG PG VG PG+ G+P
Sbjct: 1064 GE-KGDQGIAGFPGSPGE--------KGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLP 1114
Query: 348 GV----GVPGA-GIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
G G+PG GIP V G AG+PG PG P G+ G G+P
Sbjct: 1115 GEKGDKGLPGLDGIPGVKGEAGLPGT--PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLP- 1171
Query: 402 YGVGAGGFPGF-----GVGVGGIPGVAGVPGVGGV------------------------- 431
G G GFPG G G PG+AG PG+ G
Sbjct: 1172 -GRGFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHA 1230
Query: 432 -------------PGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGL 478
PG+ G+PG P K K G P A F
Sbjct: 1231 TEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQG 1290
Query: 479 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGV----------GVAPGVGVAPGIGPGG 528
+PG+G +PG+ + G PGV G PG+ GV G+ GP G
Sbjct: 1291 MPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPG 1350
Query: 529 VAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAV 588
K + GL G+PG GV GL G+PG G+PGF
Sbjct: 1351 PYDIIKGEPGLPGPEGPPGLKGL-QGLPGPKGQQGVTGL---VGIPG---PPGIPGFDGA 1403
Query: 589 PGALAAAKAAKYGAAVP-GVLGGLGALGGVGIPGGV 623
PG + + G A P G G G G G+PG +
Sbjct: 1404 PG-----QKGEMGPAGPTGPRGFPGPPGPDGLPGSM 1434
Score = 142 bits (358), Expect = 1e-33
Identities = 220/723 (30%), Positives = 260/723 (35%), Gaps = 111/723 (15%)
Query: 22 HPSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPL---KPVPGGLAGAGLG 76
+P PG +PG IPG G PG PG G LGP G P P P GL G
Sbjct: 101 YPGNPG-LPG-IPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGD 158
Query: 77 AG--LGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV 134
G LG P + G + G+ G PG GL P P
Sbjct: 159 PGEILGHVPGMLLKGE----------------RGFPGIPGTPGPPGLPGLQGPVGPPGFT 202
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP-------GV 187
PG PG G G+ G GV PGVP A V+ K G
Sbjct: 203 GPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQ 262
Query: 188 GG--AFAGIPGVGPFGGPQPGVPLGYPIK--------APKLPGGYGLPYTTGKLPYGYGP 237
G F G+PGVG G P P G P K +P PG G P G+ GP
Sbjct: 263 KGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR----QGP 318
Query: 238 GGVAGAAGKAGYP-TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPG 296
G G AG G P G GP + + G G G G PG+PG PG
Sbjct: 319 QGEKGEAGPPGPPGIVIGTGP------LGEKGERGYPGTPGPRGEPGPKGFPGLPGQ-PG 371
Query: 297 IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGA-GVPGV---- 349
G+ G A + G +PG G PG G PG G PG
Sbjct: 372 PPGLPVPGQAGAPGFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPGPPGQPGYTNGI 431
Query: 350 -----GVPG-AGIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPG-------VG 395
G PG G P +PG PG G + + Y PG +G
Sbjct: 432 VECQPGPPGDQGPPGIPGQ--PGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIG 489
Query: 396 VGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAA 455
G P G G PG GV G+PG G PG+ G PG G PG E K
Sbjct: 490 FPGQPG-AKGDRGLPGRD-GVAGVPGPQGTPGLIGQPGAKGEPG-----EFYFDLRLKGD 542
Query: 456 KYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPG-VGVAPGVGLAPGVGVAPGVGV 514
K G P A + PG+ PG +PG VG+ G GVG PG
Sbjct: 543 KGDPGFPGQPGMTGRAGSPGRDGHPGL---PGPKGSPGSVGLKGERGPPGGVGF-PGSRG 598
Query: 515 APGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVP 574
G PG GP G + K Q A G G PGL G PG V +P
Sbjct: 599 DTGPPGPPGYGPAG---------PIGDKGQ--AGFPGGPGSPGLPGPKGEPGKIV--PLP 645
Query: 575 GLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG--GVGIPG--GVVGA-GPA 629
G G+PG PG + PG+ G GA+G G+G PG G G G
Sbjct: 646 GPPGAEGLPGSPGFPGP-QGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLP 704
Query: 630 AAAAAAKAAAKAAQFGLVGAAGL-GGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAA 686
+ GL G G+ G G G+G+PG+ GL G+P P + GV
Sbjct: 705 GDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPG 764
Query: 687 RPG 689
PG
Sbjct: 765 VPG 767
Score = 115 bits (289), Expect = 1e-25
Identities = 151/487 (31%), Positives = 185/487 (37%), Gaps = 104/487 (21%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALG--PGGKPLKPVPGGLAGAGLGAG 78
P +PG P PG G PG PG G++GG L PG K + +PG GL
Sbjct: 986 PGQPG--PKGDPGISGTPGAPGLPGPK-GSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGD 1042
Query: 79 LGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVV 134
GA G P G+ + K G+ G PG G G P +PG+
Sbjct: 1043 KGAKGE---KGQAGPPGIG--IPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS-- 1095
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGA 190
PG PG V G PG LPG + PG+ +PGV AG+ P PG G
Sbjct: 1096 --PGLKGSPGSVGYPGSPG------LPGEKGDKGLPGLDGIPGVKGEAGL-PGTPGPTGP 1146
Query: 191 FA--------GIPGVGPFGGPQPGVP-LGYP--------------IKAPKLPGGYGLPYT 227
GIPG G +PG+P G+P + P L G G+P +
Sbjct: 1147 AGQKGEPGSDGIPGSAGEKG-EPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGS 1205
Query: 228 TGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGV--LPGVGGA 285
G+ + GP G G G G P GP+ + G G LPG+ G
Sbjct: 1206 KGEQGF-MGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGV 1264
Query: 286 ----GVPGVPGAIPGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPG 337
G PG PGA PG+ G G G P + G PG PGF G
Sbjct: 1265 KGDKGNPGWPGA-PGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGP-----PGVPGF-QG 1317
Query: 338 VVGVPGA-GVPG----VGVPGA-GIPVVPGA--------GIPGAAVPGVVSPEAAAKAAA 383
G+PG G+ G GVPGA G+P PG G PG +PG P
Sbjct: 1318 PKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPG--LPGPEGPPGLKGLQG 1375
Query: 384 KAAKYGARPGVGVGGIPTYGVGAGGFPGFG-----------VGVGGIPGVAGVPGVGGVP 432
G + G+ GIP G G PGF G G G G PG G+P
Sbjct: 1376 LPGPKGQQGVTGLVGIP----GPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLP 1431
Query: 433 GVGGVPG 439
G G PG
Sbjct: 1432 GSMGPPG 1438
Score = 73.6 bits (179), Expect = 6e-13
Identities = 88/300 (29%), Positives = 109/300 (36%), Gaps = 25/300 (8%)
Query: 407 GGFPGFGVG---VGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPA 463
GG G G G G+ G G G+ G+ GV G PG+ Q K G P
Sbjct: 29 GGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPG 88
Query: 464 AAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAP 522
+ A+ + PG+ PG PG PG+ G G PG+ G A
Sbjct: 89 TKGTRGPPGASGYPGNPGLPGIPGQDGPPG---PPGIPGCNGTKGERGPLGPPGLPGFAG 145
Query: 523 GIGPGGVAAAAKSAAKVAAKAQ---LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVG 579
GP G+ ++ L+ G GIPG G+PGL G PG
Sbjct: 146 NPGPPGLPGMKGDPGEILGHVPGMLLKGERGF-PGIPGTPGPPGLPGLQGPVGPPGFTGP 204
Query: 580 AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAA 639
G PG PG + + G + G G G G G PG G A A
Sbjct: 205 PGPPGPPGPPG-----EKGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFAT 256
Query: 640 KAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
K + G G G G+ GVG G PG G G P K G PGF P +PG
Sbjct: 257 KGEK-GQKGEPGFQGMPGVGEKGEPGKPGPRGKP----GKDGDKGEKGSPGFPGEPGYPG 311
Score = 33.1 bits (74), Expect = 0.92
Identities = 41/135 (30%), Positives = 49/135 (36%), Gaps = 29/135 (21%)
Query: 28 GVPGAIPGGVPGGVFYPGA-----GLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
GVPGA G+PG PG G L G PG K L+ +PG G+ +G
Sbjct: 1335 GVPGA--KGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVG-- 1390
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVK 142
PG P G+ G G PG G A P+ P PG
Sbjct: 1391 ----IPG---PPGIP-------------GFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGL 1430
Query: 143 PGKVPGVGLPGVYPG 157
PG + G P V G
Sbjct: 1431 PGSMGPPGTPSVDHG 1445
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 169 bits (428), Expect = 8e-42
Identities = 219/741 (29%), Positives = 271/741 (36%), Gaps = 139/741 (18%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G PG P G+ G PG G G G G GKP K G G
Sbjct: 267 GPPG--PPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG-------------- 310
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVVPQPGAGVK 142
+PG D G G PG G G + P PG V+P+PG G+
Sbjct: 311 -----IPGLPGDP-----------GYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGIT 354
Query: 143 PGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
G+ +GLPG LPG + FPG+ PG+P G P F G G
Sbjct: 355 IGEKGNIGLPG------LPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQK 408
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG-----------YGPGGVAGAAGKA 247
GP PG+ + P PG GLP G P G GP G G+ G
Sbjct: 409 GDEGP-PGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIPPSDEICEPGPPGPPGSPGDK 465
Query: 248 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G GV K F G+ G G+PG+PG +G G
Sbjct: 466 GLQGEQGV-------KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKG 518
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-----AGVPG----VGVPGA-GIP 357
A A GA PG PGF PG G PG G+ G +G PGA G+P
Sbjct: 519 QAGATGPKGLPGIPGA-----PGAPGF-PGSKGEPGDILTFPGMKGDKGELGSPGAPGLP 572
Query: 358 VVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--- 413
+PG PG +PG+ P+ + G G+ G+P +G G PGFG
Sbjct: 573 GLPGT--PGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFGPPG 629
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG-------------V 459
VG GI GVAG PG G+PG G PG I+ + + G
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQP 689
Query: 460 GTPAAAAAKAAAKAAQFGL--VPGVGVAPGVGVAPGVGVAPG-VGL--APGVGVAPGVGV 514
G P +K GL PG PG+ PG PG +GL PG PG
Sbjct: 690 GLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG 749
Query: 515 APGVGVAPGIGPGGV-----AAAAKSAAKVAAKAQLRAAAGLGA-----------GIPGL 558
PG + GP G+ A K GL G PG
Sbjct: 750 EPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGP 809
Query: 559 GVGVGVPGLGVGA--GVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 616
G+PG+GV G PG+ G PG +PG G VPG G G+ G
Sbjct: 810 MGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPG--EKGDPGPPGLDVPGPPGERGSPGI 867
Query: 617 VGIPGGVVGAG----PAAAAAAAKAAAKAAQFGLVGAAG-LGGLGV-GGLGVPGVGGLGG 670
G PG + G P A A+ K + G++G G G LG+ G GVPG+ G G
Sbjct: 868 PGAPGPIGPPGSPGLPGKAGASGFPGTK-GEMGMMGPPGPPGPLGIPGRSGVPGLKGDDG 926
Query: 671 I--PPAAAAKAAKYGVAARPG 689
+ P + G PG
Sbjct: 927 LQGQPGLPGPTGEKGSKGEPG 947
Score = 162 bits (411), Expect = 8e-40
Identities = 216/695 (31%), Positives = 251/695 (36%), Gaps = 112/695 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLG 80
P P G PG P G PG G L G GALGP G P P G G GL
Sbjct: 738 PPGPPGFPG--PKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGR---TGLD 792
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP--QPG 138
P G + P G G G PG+ G+GV P PG P QPG
Sbjct: 793 GLPGPK--GDVGPNGQP-------------GPMGPPGLPGIGVQGPPGPPGIPGPIGQPG 837
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG- 196
PG+ G PG+ G PG R PG+ PG P G P PG GA +G PG
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGP-PGERGSPGIPGAPG-PIGPPGSPGLPGKAGA-SGFPGT 894
Query: 197 ---VGPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPT 251
+G G P P PLG P ++ P L G GL G LP GP G G+ G+ G P
Sbjct: 895 KGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPG-LP---GPTGEKGSKGEPGLP- 949
Query: 252 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAA 310
GP G +L G G PG+PG IPG+ G G G P
Sbjct: 950 ----GPP-------------GPMDPNLLGSKGEKGEPGLPG-IPGVSGPKGYQGLPGDPG 991
Query: 311 AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVP 370
+ + G P GP PG+ G PG +G PG + G PG
Sbjct: 992 QPGLSGQPGLPG------PPGPKGNPGLPGQPGL----IGPPGLK-GTIGDMGFPGPQ-- 1038
Query: 371 GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGG 430
GV P + + G G G P G+ + G PG G G PG+ G PG G
Sbjct: 1039 GVEGPPGPSGVPGQPGSPGLPGQKGDKGDP--GISSIGLPGLP-GPKGEPGLPGYPGNPG 1095
Query: 431 VPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGV 490
+ G G PG+ P A GTP K + +PG G G
Sbjct: 1096 IKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGG 1155
Query: 491 APGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAG 550
PG PG PG PG G PG G G
Sbjct: 1156 HPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG---------------------- 1193
Query: 551 LGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGAAVPGVLG 609
G+PGL G GL G PGL G PGF PG G A+ G G
Sbjct: 1194 -PPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKG 1252
Query: 610 GLGALGGVGIPG-----GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 663
G G G PG G+ G GP + G G GL GL G G P
Sbjct: 1253 NPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGL-KGDQGPP 1311
Query: 664 GVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
G+ G G P G+ PG P FPG
Sbjct: 1312 GLQGNPGRP-------GLNGMKGDPGLPGVPGFPG 1339
Score = 162 bits (411), Expect = 8e-40
Identities = 213/689 (30%), Positives = 261/689 (37%), Gaps = 89/689 (12%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA----GLGALGG--GALGPGGKPLKPVPGGLAGAGLG 76
P P G+PG G PG PG GL + G G GP G + PG G+
Sbjct: 809 PMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIP 868
Query: 77 AGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPG---- 131
G PG +PG A+ + K G+ G PG G LG+ VPG
Sbjct: 869 GAPGPIGPPGSPG--LPGKAG--ASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGD 924
Query: 132 -AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG- 189
+ QPG G+ G PG+ PG PG P + G G+ P PGV G
Sbjct: 925 DGLQGQPGLPGPTGEKGSKGEPGL-PGP--PGPMDPNLLGSKGEKGEPGL-PGIPGVSGP 980
Query: 190 -AFAGIPGVG--PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK 246
+ G+PG P QPG+P G P PK G GLP G + GP G+ G G
Sbjct: 981 KGYQGLPGDPGQPGLSGQPGLP-GPP--GPK--GNPGLPGQPGLI----GPPGLKGTIGD 1031
Query: 247 AGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVL--PGVGGAGVPGVPG--------AIP 295
G+P GV GP + + + G G PG+ G+PG+PG P
Sbjct: 1032 MGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYP 1091
Query: 296 GIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG-V 349
G GI G VG P + PG PGF PG G PG +G PG
Sbjct: 1092 GNPGIKGSVGDPGLPGLPGTPGAKGQ--------PGLPGF-PGTPGPPGPKGISGPPGNP 1142
Query: 350 GVPGAGIPVVPGAGIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVG 405
G+PG PV G G PG P G + A + + G +PG G G P G
Sbjct: 1143 GLPGEPGPV-GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG-QPGFGNPGPPGLP-G 1199
Query: 406 AGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAA 465
G G G G+ GIPG G+PG G PG G PGV P + A + G P
Sbjct: 1200 LSGQKGDG-GLPGIPGNPGLPGPKGEPGFHGFPGVQ-GPPGPPGSPGPALEGPKGNPGPQ 1257
Query: 466 AAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIG 525
F +PG PG+ PG G G PG PG+ G PG+
Sbjct: 1258 GPPGRPGPTGFQGLPGPEGPPGL---PGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGL- 1313
Query: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 585
G + K G PGL G PG+ +GVPG G PG
Sbjct: 1314 QGNPGRPGLNGMK---------------GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGL 1358
Query: 586 GAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
PG + + G G G G G+ G GP + G
Sbjct: 1359 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNG 1418
Query: 646 LVGAAGLGG-LGVGGL-GVPGVGGLGGIP 672
L G G GG G GL G PG GL G P
Sbjct: 1419 LPGFDGAGGRKGDPGLPGQPGTRGLDGPP 1447
Score = 138 bits (348), Expect = 2e-32
Identities = 208/729 (28%), Positives = 263/729 (36%), Gaps = 120/729 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPG--GLAGAGLGA 77
P P G+ G P G+PG +PG GL + G GA GP G +PG G G
Sbjct: 85 PPGPKGIRG--PPGLPG---FPGTPGLPGMPGHDGAPGPQG-----IPGCNGTKGERGFP 134
Query: 78 GLGAFPAVTFPGAL--VPGGVADAAAAYKAAKAGA----------GLGGVPGVGGLGVSA 125
G FP + P +PG + + ++ G G+ G+PG G+
Sbjct: 135 GSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPI 194
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 185
P P ++ PG PG +GL P G G P P G + K P
Sbjct: 195 GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG----PPGPPGQISEQKRP 250
Query: 186 GVGGAF----AGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPG 238
+ F G+PG GP G P P G P G G P GK G
Sbjct: 251 -IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQP 309
Query: 239 GVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGAGVPGVPG- 292
G+ G G GYP G G + G+ G G G+PG+PG
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 293 ----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVP 347
PGI G G+ P AA PG PGF PG G G G P
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGP--------------PGPPGF-PGERGQKGDEGPP 414
Query: 348 GVGVPGA----GIPVVPG-AGIPGAAVPGVVSPEAAAKAA-----AKAAKYGARPGVGVG 397
G+ +PG G P PG G PG A P + + + G + GV
Sbjct: 415 GISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVK 474
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G G F G G+ G PG G+PG+ G PG G PG + A A K
Sbjct: 475 G----DKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG---QKGEKGQAGATGPKG 527
Query: 458 GVGTPAAAAAKAAAKAAQFGLVPGVGVAPG-VGVAPGVGVAPGVGLAPGVGVAPGVGVAP 516
G P A A PG PG + PG+ G +PG PG+ P
Sbjct: 528 LPGIPGAPGAPG---------FPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTP 578
Query: 517 GVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGV--GAG 572
G PG+ GP G + K + G G+PG +G PG G G
Sbjct: 579 GQDGLPGLPGPKG------EPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVG 632
Query: 573 VPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA 632
G+ AG PG +PG PG+ G G G VG+PG G
Sbjct: 633 EKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLP 692
Query: 633 AAAKAAAKAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPG 689
G+ G+ G G+ G+G G PG G GI PP A + G+ PG
Sbjct: 693 ------------GIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPG 740
Query: 690 FGLSPIFPG 698
P FPG
Sbjct: 741 ---PPGFPG 746
Score = 138 bits (348), Expect = 2e-32
Identities = 202/652 (30%), Positives = 239/652 (36%), Gaps = 118/652 (18%)
Query: 23 PSRPG-----GVPGAI-PGGVPGGVFYPG-AGLGALGG-----GALGPGGKP-------L 63
P PG G+PGA P G PG PG AG G G +GP G P
Sbjct: 856 PGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGR 915
Query: 64 KPVPG-----GLAGA-GLGAGLGAFPAVTFPGALVPGGVADA-AAAYKAAKAGAGLGGVP 116
VPG GL G GL G + PG P G D K K GL G+P
Sbjct: 916 SGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIP 975
Query: 117 GVGG-LGVSAAPSVPG--AVVPQPGAGVKPGKVPGVGLPGVYPG--------GVLPGARF 165
GV G G P PG + QPG PG GLPG PG G + F
Sbjct: 976 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPG-QPGLIGPPGLKGTIGDMGF 1034
Query: 166 PGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPGVGPFGGPQPGVPLGYPIKAPKLPGG 221
PG + G P +GV +P +PG+ G G PG+ G P P G P P PG
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEP-GLPGYPGN 1093
Query: 222 YGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGV 278
G+ + G LP G G G G G+P G GP+ + G G
Sbjct: 1094 PGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNP------GLPGE 1147
Query: 279 LPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG-P 336
VGG G PG PG PG G G G P A PG PGFG P
Sbjct: 1148 PGPVGGGGHPGQPGP-PGEKGKPGQDGIPGPAGQKGE--------------PGQPGFGNP 1192
Query: 337 GVVGVPG-------AGVPGV----GVPGA-------GIPVVPGA-GIPGAAVPGVVSPEA 377
G G+PG G+PG+ G+PG G P V G G PG+ P + P+
Sbjct: 1193 GPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKG 1252
Query: 378 AAKAAAKAAKYGARPG-VGVGGIPTYGVGAGGFPGFG--VGVGGIPGVAGVPGVGGVPGV 434
RPG G G+P G G PG G G G PG G+PG+ G+ G
Sbjct: 1253 NPGPQGPPG----RPGPTGFQGLPG-PEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGD 1307
Query: 435 GGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVA---PGVGVA 491
G PG+ +P K G P K + VPG PG+
Sbjct: 1308 QGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSG------VPGSAGPEGEPGLIGP 1361
Query: 492 PGVGVAPGVG----LAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLR 546
PG PG + G PG+ PG+ PG GP G+
Sbjct: 1362 PGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRN---- 1417
Query: 547 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 598
GL G G G G PGL G GL G G PG + A
Sbjct: 1418 ---GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVA 1465
Score = 90.1 bits (222), Expect = 6e-18
Identities = 154/561 (27%), Positives = 193/561 (34%), Gaps = 101/561 (18%)
Query: 205 PGVPLGYPIKAPKLPGGYGLPYTTGK-----LPYGYGPGGVAGAAGKAGYPTGTGVGPQA 259
PG+ G+P P PG G P G+ +P GP G+ G G G+P G
Sbjct: 53 PGLE-GHP-GLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFP-----GTPG 105
Query: 260 AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKA 318
A G G G G PG PG PG+ G G G P + +
Sbjct: 106 LPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG-FPGLQGPPGPPGIPGMKGEPGSIIMS 164
Query: 319 AKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG-VGVPGAGIPVVPG-AGIPGAAVPGVVSP 375
+ G PG PG PG+ G+PG G+PG +G PG PG G PG PG+ P
Sbjct: 165 SLPGPKGN--PGYPG-PPGIQGLPGPTGIPGPIGPPGP-----PGLMGPPGP--PGLPGP 214
Query: 376 EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG------------FGVGVGGIPGVA 423
+ + K G + G+ G P G PG F G G+PG
Sbjct: 215 KGNMGLNFQGPK-GEKGEQGLQGPP-------GPPGQISEQKRPIDVEFQKGDQGLPGDR 266
Query: 424 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG-------------------VGTPAA 464
G PG G+ G G PG + + K K G G P
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 465 AAAKAAAKAAQFGLVPGVGV-APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
K PG+ + PG G+ +G +GL PG+ G PG+ PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGTGIT--IGEKGNIGL-PGLPGEKGERGFPGIQGPPG 383
Query: 524 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAG-- 581
+ PG AA R G G PG+ + G PGL G PGL G
Sbjct: 384 L-PGPPGAAVMGPPGPPGFPGERGQKG-DEGPPGISI-PGPPGLDGQPGAPGLPGPPGPA 440
Query: 582 -----------VPGFGAVPGALAAAKAAKYGAAVPGVLG-------GLGALGGVGIPGGV 623
PG PG+ K + V G G G G G G PG
Sbjct: 441 GPHIPPSDEICEPGPPGPPGS-PGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLP 499
Query: 624 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP------PAAAA 677
GP + + Q G G GL G+ G G PG G G P P
Sbjct: 500 GLPGPPGSLGFPGQKGEKGQAGATGPKGLPGI-PGAPGAPGFPGSKGEPGDILTFPGMKG 558
Query: 678 KAAKYGVAARPGFGLSPIFPG 698
+ G PG P PG
Sbjct: 559 DKGELGSPGAPGLPGLPGTPG 579
Score = 65.1 bits (157), Expect = 2e-10
Identities = 115/432 (26%), Positives = 142/432 (32%), Gaps = 66/432 (15%)
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA 354
G+ AG+ A + A AA YG + PG G+ G G G PG+
Sbjct: 5 GVSLAAGLFLLALSLWGQPAEAAACYGCS----PGSKCDCSGIKGEKGERGFPGL----- 55
Query: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
G PG +PG PE G R G GIP G PG
Sbjct: 56 -------EGHPG--LPGFPGPEGPP---------GPRGQKGDDGIP-------GPPG--- 87
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAA 474
GI G G+PG G PG+ G+PG +P Q K G P +
Sbjct: 88 -PKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPP 146
Query: 475 QFGLVPGVGVAPG---VGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPG 527
+PG+ PG + PG PG PG+ PG PG PG +GP
Sbjct: 147 GPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPP 206
Query: 528 GVAAAAKSAAKVAAKAQ----------LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 577
G + Q L+ G I + V G+PG
Sbjct: 207 GPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDR 266
Query: 578 VGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKA 637
G PG PG K K PG G G G G PG G
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 638 AAKAAQFGLVGAAGLGGL-----GVG-GLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFG 691
+ Q G G G GL G G +G G GL G+P + G+ PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFP-GIQGPPGL- 384
Query: 692 LSPIFPGGACLG 703
P PG A +G
Sbjct: 385 --PGPPGAAVMG 394
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 169 bits (428), Expect = 8e-42
Identities = 219/741 (29%), Positives = 271/741 (36%), Gaps = 139/741 (18%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G PG P G+ G PG G G G G GKP K G G
Sbjct: 267 GPPG--PPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG-------------- 310
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVVPQPGAGVK 142
+PG D G G PG G G + P PG V+P+PG G+
Sbjct: 311 -----IPGLPGDP-----------GYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGIT 354
Query: 143 PGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
G+ +GLPG LPG + FPG+ PG+P G P F G G
Sbjct: 355 IGEKGNIGLPG------LPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQK 408
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG-----------YGPGGVAGAAGKA 247
GP PG+ + P PG GLP G P G GP G G+ G
Sbjct: 409 GDEGP-PGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIPPSDEICEPGPPGPPGSPGDK 465
Query: 248 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G GV K F G+ G G+PG+PG +G G
Sbjct: 466 GLQGEQGV-------KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKG 518
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-----AGVPG----VGVPGA-GIP 357
A A GA PG PGF PG G PG G+ G +G PGA G+P
Sbjct: 519 QAGATGPKGLPGIPGA-----PGAPGF-PGSKGEPGDILTFPGMKGDKGELGSPGAPGLP 572
Query: 358 VVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--- 413
+PG PG +PG+ P+ + G G+ G+P +G G PGFG
Sbjct: 573 GLPGT--PGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFGPPG 629
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG-------------V 459
VG GI GVAG PG G+PG G PG I+ + + G
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQP 689
Query: 460 GTPAAAAAKAAAKAAQFGL--VPGVGVAPGVGVAPGVGVAPG-VGL--APGVGVAPGVGV 514
G P +K GL PG PG+ PG PG +GL PG PG
Sbjct: 690 GLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG 749
Query: 515 APGVGVAPGIGPGGV-----AAAAKSAAKVAAKAQLRAAAGLGA-----------GIPGL 558
PG + GP G+ A K GL G PG
Sbjct: 750 EPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGP 809
Query: 559 GVGVGVPGLGVGA--GVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 616
G+PG+GV G PG+ G PG +PG G VPG G G+ G
Sbjct: 810 MGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPG--EKGDPGPPGLDVPGPPGERGSPGI 867
Query: 617 VGIPGGVVGAG----PAAAAAAAKAAAKAAQFGLVGAAG-LGGLGV-GGLGVPGVGGLGG 670
G PG + G P A A+ K + G++G G G LG+ G GVPG+ G G
Sbjct: 868 PGAPGPIGPPGSPGLPGKAGASGFPGTK-GEMGMMGPPGPPGPLGIPGRSGVPGLKGDDG 926
Query: 671 I--PPAAAAKAAKYGVAARPG 689
+ P + G PG
Sbjct: 927 LQGQPGLPGPTGEKGSKGEPG 947
Score = 165 bits (417), Expect = 2e-40
Identities = 214/689 (31%), Positives = 248/689 (35%), Gaps = 106/689 (15%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLG 80
P P G PG P G PG G L G GALGP G P P G G GL
Sbjct: 738 PPGPPGFPG--PKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGR---TGLD 792
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP--QPG 138
P G + P G G G PG+ G+GV P PG P QPG
Sbjct: 793 GLPGPK--GDVGPNGQP-------------GPMGPPGLPGIGVQGPPGPPGIPGPIGQPG 837
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG- 196
PG+ G PG+ G PG R PG+ PG P G P PG GA +G PG
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGP-PGERGSPGIPGAPG-PIGPPGSPGLPGKAGA-SGFPGT 894
Query: 197 ---VGPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPT 251
+G G P P PLG P ++ P L G GL G LP GP G G+ G+ G P
Sbjct: 895 KGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPG-LP---GPTGEKGSKGEPGLP- 949
Query: 252 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAA 310
GP G +L G G PG+PG IPG+ G G G P
Sbjct: 950 ----GPP-------------GPMDPNLLGSKGEKGEPGLPG-IPGVSGPKGYQGLPGDPG 991
Query: 311 AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVP 370
+ + G P GP PG+ G PG +G PG + G PG
Sbjct: 992 QPGLSGQPGLPG------PPGPKGNPGLPGQPGL----IGPPGLK-GTIGDMGFPGPQ-- 1038
Query: 371 GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGG 430
GV P + + G G G P G+ + G PG G G PG+ G PG G
Sbjct: 1039 GVEGPPGPSGVPGQPGSPGLPGQKGDKGDP--GISSIGLPGLP-GPKGEPGLPGYPGNPG 1095
Query: 431 VPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGV 490
+ G G PG+ P A GTP K + +PG G G
Sbjct: 1096 IKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGG 1155
Query: 491 APGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAG 550
PG PG PG PG G PG G G
Sbjct: 1156 HPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG---------------------- 1193
Query: 551 LGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGAAVPGVLG 609
G+PGL G GL G PGL G PGF PG G A+ G G
Sbjct: 1194 -PPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKG 1252
Query: 610 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLG 669
G G G PG GP + G G GL GL G G PG+ G
Sbjct: 1253 NPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGL-KGDQGPPGLQGNP 1311
Query: 670 GIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
G P G+ PG P FPG
Sbjct: 1312 GRP-------GLNGMKGDPGLPGVPGFPG 1333
Score = 138 bits (348), Expect = 2e-32
Identities = 208/729 (28%), Positives = 263/729 (36%), Gaps = 120/729 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPG--GLAGAGLGA 77
P P G+ G P G+PG +PG GL + G GA GP G +PG G G
Sbjct: 85 PPGPKGIRG--PPGLPG---FPGTPGLPGMPGHDGAPGPQG-----IPGCNGTKGERGFP 134
Query: 78 GLGAFPAVTFPGAL--VPGGVADAAAAYKAAKAGA----------GLGGVPGVGGLGVSA 125
G FP + P +PG + + ++ G G+ G+PG G+
Sbjct: 135 GSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPI 194
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 185
P P ++ PG PG +GL P G G P P G + K P
Sbjct: 195 GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG----PPGPPGQISEQKRP 250
Query: 186 GVGGAF----AGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPG 238
+ F G+PG GP G P P G P G G P GK G
Sbjct: 251 -IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQP 309
Query: 239 GVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGAGVPGVPG- 292
G+ G G GYP G G + G+ G G G+PG+PG
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 293 ----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVP 347
PGI G G+ P AA PG PGF PG G G G P
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGP--------------PGPPGF-PGERGQKGDEGPP 414
Query: 348 GVGVPGA----GIPVVPG-AGIPGAAVPGVVSPEAAAKAA-----AKAAKYGARPGVGVG 397
G+ +PG G P PG G PG A P + + + G + GV
Sbjct: 415 GISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVK 474
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G G F G G+ G PG G+PG+ G PG G PG + A A K
Sbjct: 475 G----DKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG---QKGEKGQAGATGPKG 527
Query: 458 GVGTPAAAAAKAAAKAAQFGLVPGVGVAPG-VGVAPGVGVAPGVGLAPGVGVAPGVGVAP 516
G P A A PG PG + PG+ G +PG PG+ P
Sbjct: 528 LPGIPGAPGAPG---------FPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTP 578
Query: 517 GVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGV--GAG 572
G PG+ GP G + K + G G+PG +G PG G G
Sbjct: 579 GQDGLPGLPGPKG------EPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVG 632
Query: 573 VPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA 632
G+ AG PG +PG PG+ G G G VG+PG G
Sbjct: 633 EKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLP 692
Query: 633 AAAKAAAKAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPG 689
G+ G+ G G+ G+G G PG G GI PP A + G+ PG
Sbjct: 693 ------------GIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPG 740
Query: 690 FGLSPIFPG 698
P FPG
Sbjct: 741 ---PPGFPG 746
Score = 137 bits (346), Expect = 3e-32
Identities = 196/650 (30%), Positives = 235/650 (36%), Gaps = 120/650 (18%)
Query: 23 PSRPG-----GVPGAI-PGGVPGGVFYPG-AGLGALGG-----GALGPGGKP-------L 63
P PG G+PGA P G PG PG AG G G +GP G P
Sbjct: 856 PGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGR 915
Query: 64 KPVPG-----GLAGA-GLGAGLGAFPAVTFPGALVPGGVADA-AAAYKAAKAGAGLGGVP 116
VPG GL G GL G + PG P G D K K GL G+P
Sbjct: 916 SGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIP 975
Query: 117 GVGG-LGVSAAPSVPG--AVVPQPGAGVKPGKVPGVGLPGVYPG--------GVLPGARF 165
GV G G P PG + QPG PG GLPG PG G + F
Sbjct: 976 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPG-QPGLIGPPGLKGTIGDMGF 1034
Query: 166 PGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPGVGPFGGPQPGVPLGYPIKAPKLPGG 221
PG + G P +GV +P +PG+ G G PG+ G P P G P P PG
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEP-GLPGYPGN 1093
Query: 222 YGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGV 278
G+ + G LP G G G G G+P G GP+ + G G
Sbjct: 1094 PGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNP------GLPGE 1147
Query: 279 LPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG-P 336
VGG G PG PG PG G G G P A PG PGFG P
Sbjct: 1148 PGPVGGGGHPGQPGP-PGEKGKPGQDGIPGPAGQKGE--------------PGQPGFGNP 1192
Query: 337 GVVGVPG-------AGVPGV----GVPGA-------GIPVVPGA-GIPGAAVPGVVSPEA 377
G G+PG G+PG+ G+PG G P V G G PG+ P + P+
Sbjct: 1193 GPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKG 1252
Query: 378 AAKAAAKAAKYGARPGVGVGGIPTYG-----VGAGGFPGFGVGVGGIPGVAGVPGVGGVP 432
+ G G G+P G G G PG G+ G+ G G PG+ G P
Sbjct: 1253 NPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLP-GLPGLKGDQGPPGLQGNP 1311
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAP 492
G G+ G+ P K G P +A + PG+ PG P
Sbjct: 1312 GRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGE---------PGLIGPPGPPGLP 1362
Query: 493 GVG----VAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAA 548
G + G PG+ PG+ PG G+ PG
Sbjct: 1363 GPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGL-PGPTGPPGDPGRN---------- 1411
Query: 549 AGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 598
GL G G G G PGL G GL G G PG + A
Sbjct: 1412 -GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVA 1459
Score = 90.1 bits (222), Expect = 6e-18
Identities = 154/561 (27%), Positives = 193/561 (34%), Gaps = 101/561 (18%)
Query: 205 PGVPLGYPIKAPKLPGGYGLPYTTGK-----LPYGYGPGGVAGAAGKAGYPTGTGVGPQA 259
PG+ G+P P PG G P G+ +P GP G+ G G G+P G
Sbjct: 53 PGLE-GHP-GLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFP-----GTPG 105
Query: 260 AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKA 318
A G G G G PG PG PG+ G G G P + +
Sbjct: 106 LPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG-FPGLQGPPGPPGIPGMKGEPGSIIMS 164
Query: 319 AKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG-VGVPGAGIPVVPG-AGIPGAAVPGVVSP 375
+ G PG PG PG+ G+PG G+PG +G PG PG G PG PG+ P
Sbjct: 165 SLPGPKGN--PGYPG-PPGIQGLPGPTGIPGPIGPPGP-----PGLMGPPGP--PGLPGP 214
Query: 376 EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG------------FGVGVGGIPGVA 423
+ + K G + G+ G P G PG F G G+PG
Sbjct: 215 KGNMGLNFQGPK-GEKGEQGLQGPP-------GPPGQISEQKRPIDVEFQKGDQGLPGDR 266
Query: 424 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG-------------------VGTPAA 464
G PG G+ G G PG + + K K G G P
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 465 AAAKAAAKAAQFGLVPGVGV-APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
K PG+ + PG G+ +G +GL PG+ G PG+ PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGTGIT--IGEKGNIGL-PGLPGEKGERGFPGIQGPPG 383
Query: 524 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAG-- 581
+ PG AA R G G PG+ + G PGL G PGL G
Sbjct: 384 L-PGPPGAAVMGPPGPPGFPGERGQKG-DEGPPGISI-PGPPGLDGQPGAPGLPGPPGPA 440
Query: 582 -----------VPGFGAVPGALAAAKAAKYGAAVPGVLG-------GLGALGGVGIPGGV 623
PG PG+ K + V G G G G G G PG
Sbjct: 441 GPHIPPSDEICEPGPPGPPGS-PGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLP 499
Query: 624 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP------PAAAA 677
GP + + Q G G GL G+ G G PG G G P P
Sbjct: 500 GLPGPPGSLGFPGQKGEKGQAGATGPKGLPGI-PGAPGAPGFPGSKGEPGDILTFPGMKG 558
Query: 678 KAAKYGVAARPGFGLSPIFPG 698
+ G PG P PG
Sbjct: 559 DKGELGSPGAPGLPGLPGTPG 579
Score = 65.1 bits (157), Expect = 2e-10
Identities = 115/432 (26%), Positives = 142/432 (32%), Gaps = 66/432 (15%)
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA 354
G+ AG+ A + A AA YG + PG G+ G G G PG+
Sbjct: 5 GVSLAAGLFLLALSLWGQPAEAAACYGCS----PGSKCDCSGIKGEKGERGFPGL----- 55
Query: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
G PG +PG PE G R G GIP G PG
Sbjct: 56 -------EGHPG--LPGFPGPEGPP---------GPRGQKGDDGIP-------GPPG--- 87
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAA 474
GI G G+PG G PG+ G+PG +P Q K G P +
Sbjct: 88 -PKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPP 146
Query: 475 QFGLVPGVGVAPG---VGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPG 527
+PG+ PG + PG PG PG+ PG PG PG +GP
Sbjct: 147 GPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPP 206
Query: 528 GVAAAAKSAAKVAAKAQ----------LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 577
G + Q L+ G I + V G+PG
Sbjct: 207 GPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDR 266
Query: 578 VGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKA 637
G PG PG K K PG G G G G PG G
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 638 AAKAAQFGLVGAAGLGGL-----GVG-GLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFG 691
+ Q G G G GL G G +G G GL G+P + G+ PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFP-GIQGPPGL- 384
Query: 692 LSPIFPGGACLG 703
P PG A +G
Sbjct: 385 --PGPPGAAVMG 394
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 169 bits (428), Expect = 8e-42
Identities = 219/741 (29%), Positives = 271/741 (36%), Gaps = 139/741 (18%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G PG P G+ G PG G G G G GKP K G G
Sbjct: 267 GPPG--PPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG-------------- 310
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVVPQPGAGVK 142
+PG D G G PG G G + P PG V+P+PG G+
Sbjct: 311 -----IPGLPGDP-----------GYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGIT 354
Query: 143 PGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
G+ +GLPG LPG + FPG+ PG+P G P F G G
Sbjct: 355 IGEKGNIGLPG------LPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQK 408
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG-----------YGPGGVAGAAGKA 247
GP PG+ + P PG GLP G P G GP G G+ G
Sbjct: 409 GDEGP-PGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIPPSDEICEPGPPGPPGSPGDK 465
Query: 248 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G GV K F G+ G G+PG+PG +G G
Sbjct: 466 GLQGEQGV-------KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKG 518
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-----AGVPG----VGVPGA-GIP 357
A A GA PG PGF PG G PG G+ G +G PGA G+P
Sbjct: 519 QAGATGPKGLPGIPGA-----PGAPGF-PGSKGEPGDILTFPGMKGDKGELGSPGAPGLP 572
Query: 358 VVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--- 413
+PG PG +PG+ P+ + G G+ G+P +G G PGFG
Sbjct: 573 GLPGT--PGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFGPPG 629
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG-------------V 459
VG GI GVAG PG G+PG G PG I+ + + G
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQP 689
Query: 460 GTPAAAAAKAAAKAAQFGL--VPGVGVAPGVGVAPGVGVAPG-VGL--APGVGVAPGVGV 514
G P +K GL PG PG+ PG PG +GL PG PG
Sbjct: 690 GLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG 749
Query: 515 APGVGVAPGIGPGGV-----AAAAKSAAKVAAKAQLRAAAGLGA-----------GIPGL 558
PG + GP G+ A K GL G PG
Sbjct: 750 EPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGP 809
Query: 559 GVGVGVPGLGVGA--GVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 616
G+PG+GV G PG+ G PG +PG G VPG G G+ G
Sbjct: 810 MGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPG--EKGDPGPPGLDVPGPPGERGSPGI 867
Query: 617 VGIPGGVVGAG----PAAAAAAAKAAAKAAQFGLVGAAG-LGGLGV-GGLGVPGVGGLGG 670
G PG + G P A A+ K + G++G G G LG+ G GVPG+ G G
Sbjct: 868 PGAPGPIGPPGSPGLPGKAGASGFPGTK-GEMGMMGPPGPPGPLGIPGRSGVPGLKGDDG 926
Query: 671 I--PPAAAAKAAKYGVAARPG 689
+ P + G PG
Sbjct: 927 LQGQPGLPGPTGEKGSKGEPG 947
Score = 164 bits (414), Expect = 3e-40
Identities = 216/692 (31%), Positives = 251/692 (36%), Gaps = 109/692 (15%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLG 80
P P G PG P G PG G L G GALGP G P P G G GL
Sbjct: 738 PPGPPGFPG--PKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGR---TGLD 792
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP--QPG 138
P G + P G G G PG+ G+GV P PG P QPG
Sbjct: 793 GLPGPK--GDVGPNGQP-------------GPMGPPGLPGIGVQGPPGPPGIPGPIGQPG 837
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG- 196
PG+ G PG+ G PG R PG+ PG P G P PG GA +G PG
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGP-PGERGSPGIPGAPG-PIGPPGSPGLPGKAGA-SGFPGT 894
Query: 197 ---VGPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPT 251
+G G P P PLG P ++ P L G GL G LP GP G G+ G+ G P
Sbjct: 895 KGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPG-LP---GPTGEKGSKGEPGLP- 949
Query: 252 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAA 310
GP G +L G G PG+PG IPG+ G G G P
Sbjct: 950 ----GPP-------------GPMDPNLLGSKGEKGEPGLPG-IPGVSGPKGYQGLPGDPG 991
Query: 311 AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVP 370
+ + G P GP PG+ G PG +G PG + G PG
Sbjct: 992 QPGLSGQPGLPG------PPGPKGNPGLPGQPGL----IGPPGLK-GTIGDMGFPGPQ-- 1038
Query: 371 GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGG 430
GV P + + G G G P G+ + G PG G G PG+ G PG G
Sbjct: 1039 GVEGPPGPSGVPGQPGSPGLPGQKGDKGDP--GISSIGLPGLP-GPKGEPGLPGYPGNPG 1095
Query: 431 VPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGV 490
+ G G PG+ P A GTP K + +PG G G
Sbjct: 1096 IKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGG 1155
Query: 491 APGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAG 550
PG PG PG PG G PG G G
Sbjct: 1156 HPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG---------------------- 1193
Query: 551 LGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGAAVPGVLG 609
G+PGL G GL G PGL G PGF PG G A+ G G
Sbjct: 1194 -PPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKG 1252
Query: 610 GLGALGGVGIPG--GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 666
G G G PG G+ G GP + G G GL GL G G PG+
Sbjct: 1253 NPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGL-KGDQGPPGLQ 1311
Query: 667 GLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
G G P G+ PG P FPG
Sbjct: 1312 GNPGRP-------GLNGMKGDPGLPGVPGFPG 1336
Score = 138 bits (348), Expect = 2e-32
Identities = 208/729 (28%), Positives = 263/729 (36%), Gaps = 120/729 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPG--GLAGAGLGA 77
P P G+ G P G+PG +PG GL + G GA GP G +PG G G
Sbjct: 85 PPGPKGIRG--PPGLPG---FPGTPGLPGMPGHDGAPGPQG-----IPGCNGTKGERGFP 134
Query: 78 GLGAFPAVTFPGAL--VPGGVADAAAAYKAAKAGA----------GLGGVPGVGGLGVSA 125
G FP + P +PG + + ++ G G+ G+PG G+
Sbjct: 135 GSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPI 194
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 185
P P ++ PG PG +GL P G G P P G + K P
Sbjct: 195 GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG----PPGPPGQISEQKRP 250
Query: 186 GVGGAF----AGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPG 238
+ F G+PG GP G P P G P G G P GK G
Sbjct: 251 -IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQP 309
Query: 239 GVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGAGVPGVPG- 292
G+ G G GYP G G + G+ G G G+PG+PG
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 293 ----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVP 347
PGI G G+ P AA PG PGF PG G G G P
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGP--------------PGPPGF-PGERGQKGDEGPP 414
Query: 348 GVGVPGA----GIPVVPG-AGIPGAAVPGVVSPEAAAKAA-----AKAAKYGARPGVGVG 397
G+ +PG G P PG G PG A P + + + G + GV
Sbjct: 415 GISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVK 474
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G G F G G+ G PG G+PG+ G PG G PG + A A K
Sbjct: 475 G----DKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG---QKGEKGQAGATGPKG 527
Query: 458 GVGTPAAAAAKAAAKAAQFGLVPGVGVAPG-VGVAPGVGVAPGVGLAPGVGVAPGVGVAP 516
G P A A PG PG + PG+ G +PG PG+ P
Sbjct: 528 LPGIPGAPGAPG---------FPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTP 578
Query: 517 GVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGV--GAG 572
G PG+ GP G + K + G G+PG +G PG G G
Sbjct: 579 GQDGLPGLPGPKG------EPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVG 632
Query: 573 VPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA 632
G+ AG PG +PG PG+ G G G VG+PG G
Sbjct: 633 EKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLP 692
Query: 633 AAAKAAAKAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPG 689
G+ G+ G G+ G+G G PG G GI PP A + G+ PG
Sbjct: 693 ------------GIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPG 740
Query: 690 FGLSPIFPG 698
P FPG
Sbjct: 741 ---PPGFPG 746
Score = 137 bits (344), Expect = 4e-32
Identities = 199/651 (30%), Positives = 237/651 (36%), Gaps = 119/651 (18%)
Query: 23 PSRPG-----GVPGAI-PGGVPGGVFYPG-AGLGALGG-----GALGPGGKP-------L 63
P PG G+PGA P G PG PG AG G G +GP G P
Sbjct: 856 PGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGR 915
Query: 64 KPVPG-----GLAGA-GLGAGLGAFPAVTFPGALVPGGVADA-AAAYKAAKAGAGLGGVP 116
VPG GL G GL G + PG P G D K K GL G+P
Sbjct: 916 SGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIP 975
Query: 117 GVGG-LGVSAAPSVPG--AVVPQPGAGVKPGKVPGVGLPGVYPG--------GVLPGARF 165
GV G G P PG + QPG PG GLPG PG G + F
Sbjct: 976 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPG-QPGLIGPPGLKGTIGDMGF 1034
Query: 166 PGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPGVGPFGGPQPGVPLGYPIKAPKLPGG 221
PG + G P +GV +P +PG+ G G PG+ G P P G P P PG
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEP-GLPGYPGN 1093
Query: 222 YGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGV 278
G+ + G LP G G G G G+P G GP+ + G G
Sbjct: 1094 PGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNP------GLPGE 1147
Query: 279 LPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG-P 336
VGG G PG PG PG G G G P A PG PGFG P
Sbjct: 1148 PGPVGGGGHPGQPGP-PGEKGKPGQDGIPGPAGQKGE--------------PGQPGFGNP 1192
Query: 337 GVVGVPG-------AGVPGV----GVPGA-------GIPVVPGA-GIPGAAVPGVVSPEA 377
G G+PG G+PG+ G+PG G P V G G PG+ P + P+
Sbjct: 1193 GPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKG 1252
Query: 378 AAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--VGVGGIPGVAGVPGVGGVPGVG 435
+ G + G G P G PG G G G PG G+PG+ G+ G
Sbjct: 1253 NPGPQGPPGRPGFQGLPGPEGPP-------GLPGNGGIKGEKGNPGQPGLPGLPGLKGDQ 1305
Query: 436 GVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVA---PGVGVAP 492
G PG+ +P K G P K + VPG PG+ P
Sbjct: 1306 GPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSG------VPGSAGPEGEPGLIGPP 1359
Query: 493 GVGVAPGVG----LAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRA 547
G PG + G PG+ PG+ PG GP G+
Sbjct: 1360 GPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRN----- 1414
Query: 548 AAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 598
GL G G G G PGL G GL G G PG + A
Sbjct: 1415 --GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVA 1462
Score = 90.1 bits (222), Expect = 6e-18
Identities = 154/561 (27%), Positives = 193/561 (34%), Gaps = 101/561 (18%)
Query: 205 PGVPLGYPIKAPKLPGGYGLPYTTGK-----LPYGYGPGGVAGAAGKAGYPTGTGVGPQA 259
PG+ G+P P PG G P G+ +P GP G+ G G G+P G
Sbjct: 53 PGLE-GHP-GLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFP-----GTPG 105
Query: 260 AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKA 318
A G G G G PG PG PG+ G G G P + +
Sbjct: 106 LPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG-FPGLQGPPGPPGIPGMKGEPGSIIMS 164
Query: 319 AKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG-VGVPGAGIPVVPG-AGIPGAAVPGVVSP 375
+ G PG PG PG+ G+PG G+PG +G PG PG G PG PG+ P
Sbjct: 165 SLPGPKGN--PGYPG-PPGIQGLPGPTGIPGPIGPPGP-----PGLMGPPGP--PGLPGP 214
Query: 376 EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG------------FGVGVGGIPGVA 423
+ + K G + G+ G P G PG F G G+PG
Sbjct: 215 KGNMGLNFQGPK-GEKGEQGLQGPP-------GPPGQISEQKRPIDVEFQKGDQGLPGDR 266
Query: 424 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG-------------------VGTPAA 464
G PG G+ G G PG + + K K G G P
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 465 AAAKAAAKAAQFGLVPGVGV-APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
K PG+ + PG G+ +G +GL PG+ G PG+ PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGTGIT--IGEKGNIGL-PGLPGEKGERGFPGIQGPPG 383
Query: 524 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAG-- 581
+ PG AA R G G PG+ + G PGL G PGL G
Sbjct: 384 L-PGPPGAAVMGPPGPPGFPGERGQKG-DEGPPGISI-PGPPGLDGQPGAPGLPGPPGPA 440
Query: 582 -----------VPGFGAVPGALAAAKAAKYGAAVPGVLG-------GLGALGGVGIPGGV 623
PG PG+ K + V G G G G G G PG
Sbjct: 441 GPHIPPSDEICEPGPPGPPGS-PGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLP 499
Query: 624 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP------PAAAA 677
GP + + Q G G GL G+ G G PG G G P P
Sbjct: 500 GLPGPPGSLGFPGQKGEKGQAGATGPKGLPGI-PGAPGAPGFPGSKGEPGDILTFPGMKG 558
Query: 678 KAAKYGVAARPGFGLSPIFPG 698
+ G PG P PG
Sbjct: 559 DKGELGSPGAPGLPGLPGTPG 579
Score = 65.1 bits (157), Expect = 2e-10
Identities = 115/432 (26%), Positives = 142/432 (32%), Gaps = 66/432 (15%)
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA 354
G+ AG+ A + A AA YG + PG G+ G G G PG+
Sbjct: 5 GVSLAAGLFLLALSLWGQPAEAAACYGCS----PGSKCDCSGIKGEKGERGFPGL----- 55
Query: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
G PG +PG PE G R G GIP G PG
Sbjct: 56 -------EGHPG--LPGFPGPEGPP---------GPRGQKGDDGIP-------GPPG--- 87
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAA 474
GI G G+PG G PG+ G+PG +P Q K G P +
Sbjct: 88 -PKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPP 146
Query: 475 QFGLVPGVGVAPG---VGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPG 527
+PG+ PG + PG PG PG+ PG PG PG +GP
Sbjct: 147 GPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPP 206
Query: 528 GVAAAAKSAAKVAAKAQ----------LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 577
G + Q L+ G I + V G+PG
Sbjct: 207 GPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDR 266
Query: 578 VGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKA 637
G PG PG K K PG G G G G PG G
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 638 AAKAAQFGLVGAAGLGGL-----GVG-GLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFG 691
+ Q G G G GL G G +G G GL G+P + G+ PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFP-GIQGPPGL- 384
Query: 692 LSPIFPGGACLG 703
P PG A +G
Sbjct: 385 --PGPPGAAVMG 394
>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
sapiens]
Length = 1691
Score = 167 bits (424), Expect = 2e-41
Identities = 223/739 (30%), Positives = 284/739 (38%), Gaps = 107/739 (14%)
Query: 28 GVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
G+PG +PG G PG PG GL L G PG K +PG GL G
Sbjct: 602 GLPG-LPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQ---QGLPGSKGITLPC 657
Query: 86 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAAPSVPGAV-VPQ-PGAGVK 142
PG+ P G + K GL G PG G G P PG V +P+ PG
Sbjct: 658 IIPGSYGPSGFP-GTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGF--- 713
Query: 143 PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVP-----TGA--GVKPKAPGVGG----- 189
PG GLPG +PG LPG PG+ PG+P TG G + APG G
Sbjct: 714 PGPRGEKGLPG-FPG--LPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLT 770
Query: 190 ------AFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAG 242
+G+PG+ G G P P G +P PG G P T G GP G+ G
Sbjct: 771 GHKGFLGDSGLPGLKGVHGKPGLLGPKGER-GSPGTPGQVGQPGTPGSS----GPYGIKG 825
Query: 243 AAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 302
+G G P G+ + K + G G + G G+ G+PG PG+ G+ G
Sbjct: 826 KSGLPGAPGFPGI-----SGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGN-PGLVGLKG 879
Query: 303 V-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG----VGVPG 353
G+P A A + + G+ G V G PG PG+ G+PG G+PG +G G
Sbjct: 880 SPGSPGVAGLPALSGPKGEKGSV-GFV-GFPGI-PGLPGIPGTRGLKGIPGSTGKMGPSG 936
Query: 354 -AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP----------- 400
AG P G G PG G+ SP G++ G G P
Sbjct: 937 RAGTPGEKGDRGNPGPV--GIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGR 994
Query: 401 --TYGV-GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G+ GA G PG GV G PG G G+ G+PG+ G G+ P + ++ +
Sbjct: 995 PGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRG 1054
Query: 458 GVGTPAAAAAKAA----AKAAQFGLVPGVGVAPGVGVAPGV----GVAPGVGLAPGVGVA 509
G P A+ + + PG PG G G+ +G G
Sbjct: 1055 SPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGED 1114
Query: 510 PGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA----------GIPGLG 559
VGV+ VG+ G GVA + A LG+ G PGL
Sbjct: 1115 GKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLH 1174
Query: 560 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 619
G+PG G PG + GVPG +PG G PG G G G G
Sbjct: 1175 GLNGLPGTKGTHGTPGPSI-TGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGF 1233
Query: 620 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 679
PG AG A + + A Q G G GL G G PG G PP +
Sbjct: 1234 PGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLD----GERGRPGPAG----PPGPPGPS 1285
Query: 680 AKYGVAARPGFGLSPIFPG 698
+ G PGF P PG
Sbjct: 1286 SNQGDTGDPGF---PGIPG 1301
Score = 142 bits (358), Expect = 1e-33
Identities = 228/803 (28%), Positives = 291/803 (36%), Gaps = 175/803 (21%)
Query: 20 ILHPSRPGGVPGAI-PGGVPGGVFYPG----------AGLGALGG-------GALGPGGK 61
I P G PGA+ P G PG PG GLG G G GP G
Sbjct: 182 ITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGP 241
Query: 62 P-------LKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGG 114
P P G G+ G FP ++ P PG K K G+ G
Sbjct: 242 PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGP----PGFPGLGTTGEKGEKGEKGIPG 297
Query: 115 VPG----VGGLGVSAAPSVPG--AVVPQPG----AGVKPGKVPGVGLPGV-----YPGGV 159
+PG +G GV P G + PG G++ G+ +GLPG G V
Sbjct: 298 LPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIE-GQKGDIGLPGPDVFIDIDGAV 356
Query: 160 LPG-ARFPGVGVLPGVPTGAGVKP-KAP-GVGG--AFAGIPG-VGPFGGP----QPGVPL 209
+ G PGV LPG+ G++ + P GV G A +G+PG +GP G P G P
Sbjct: 357 ISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPG 416
Query: 210 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG-----------KAGYPTGTG-VGP 257
I A LPG GLP GP G G ++G+P G GP
Sbjct: 417 RTTIGAAGLPGRDGLP----------GPPGPPGPPSPEFETETLHNKESGFPGLRGEQGP 466
Query: 258 QA-AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAG--------- 302
+ K + F A GV P G G PG PG +PG+ G G
Sbjct: 467 KGNLGLKGIKGDSGFCACDGGV-PNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQG 525
Query: 303 -VGTPAAAAAAAAAAKAAKYG-AAAGLVPGGPGFG--------PGVVGVPGA-GVPGV-G 350
G P + K G + G PG GV+G PG GVPG+ G
Sbjct: 526 PAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPG 585
Query: 351 VPG------------AGIPVVPG-------AGIPGAAVPGVVSPEAAAKAAAKAAKYGAR 391
+PG G+P +PG G+PG +PG+ P K G +
Sbjct: 586 LPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQ 645
Query: 392 PGVGVGGI-----------PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV 440
G GI P+ G GFPG G G+PG G PG G G G PG+
Sbjct: 646 GLPGSKGITLPCIIPGSYGPSGFPGTPGFPG-PKGSRGLPGTPGQPGSSGSKGEPGSPGL 704
Query: 441 GISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGV 500
PE + K G P +PG PG+ +PG+ + G
Sbjct: 705 VHLPELPGFPGPRGEKGLPGFPG---------------LPGKDGLPGMIGSPGLPGSKGA 749
Query: 501 --GLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 557
+ APG G+ G +G G+ V K L G G PG
Sbjct: 750 TGDIFGAENGAPGEQGLQGLTGHKGFLGDSGL----PGLKGVHGKPGLLGPKG-ERGSPG 804
Query: 558 LGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGAAV----PG 606
VG PG +G G+ +G+PG PG K G+ V PG
Sbjct: 805 TPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPG 864
Query: 607 VLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 666
+ G G G VG+ G G A A + + G VG G+ GL G+PG
Sbjct: 865 LKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLP----GIPGTR 920
Query: 667 GLGGIPPAAAAKAAKYGVAARPG 689
GL GI P + K G A PG
Sbjct: 921 GLKGI-PGSTGKMGPSGRAGTPG 942
Score = 140 bits (354), Expect = 3e-33
Identities = 227/768 (29%), Positives = 288/768 (37%), Gaps = 133/768 (17%)
Query: 23 PSRPG--GVPGAI-----PG--GVPGGVF-----YPGA-GLGALGG--GALGPGGKP-LK 64
P PG G+PG I PG G G +F PG GL L G G LG G P LK
Sbjct: 726 PGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLK 785
Query: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL--- 121
V G GL G + PG + G ++ Y K +GL G PG G+
Sbjct: 786 GVHGK---PGLLGPKGERGSPGTPGQVGQPGTPGSSGPY-GIKGKSGLPGAPGFPGISGH 841
Query: 122 ----GVSAAPSVPGAVVPQPGAGVK--PGKVPGVGL------PGVYPGGVLPGAR----- 164
G PG++V + G+K PG VGL PGV L G +
Sbjct: 842 PGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGS 901
Query: 165 -----FPGVGVLPGVPTGAGVKPKAPGVGGAF-----AGIPGV-------GPFGGPQPGV 207
FPG+ LPG+P G+K PG G AG PG GP G P P
Sbjct: 902 VGFVGFPGIPGLPGIPGTRGLKG-IPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRR 960
Query: 208 PLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAK 266
P+ +K K G G + G P G G AG G G P G+ P + K
Sbjct: 961 PMSNLWLKGDK--GSQGSAGSNG-FPGPRGDKGEAGRPGPPGLPGAPGL-PGIIKGVSGK 1016
Query: 267 AAAKFGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAA 324
G G LPG+ G +G+ G PG +PG G G+ G+P A+ G
Sbjct: 1017 PGPPGFMGIRG-LPGLKGSSGITGFPG-MPGESGSQGIRGSPGLPGASGLPGLKGDNGQT 1074
Query: 325 AGLVPG-GPGFGPGVVGVPGAG-----VPGVGVPG-----AGIPVVPGAGIPGA-AVPGV 372
+ GP PG G G + +G PG + V G+PGA PGV
Sbjct: 1075 VEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV 1134
Query: 373 VSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF-GV-GVGGIPG--------- 421
+ GA +G G+ +G GFPGF G+ G+ G+PG
Sbjct: 1135 AGMRGEPGLPGSSGHQGAIGPLGSPGL----IGPKGFPGFPGLHGLNGLPGTKGTHGTPG 1190
Query: 422 --VAGVPGVGGVPGVGG---VPGVGISPEAQAAAAAKAAKYG-------VGTPAAAAAKA 469
+ GVPG G+PG G PG+GI + + G G P A
Sbjct: 1191 PSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISL 1250
Query: 470 AAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI----G 525
+ A PG G PG PG PG G PG PG G
Sbjct: 1251 PSLIAGQPGDPGRPGLDGERGRPGPAGPPG---PPGPSSNQGDTGDPGFPGIPGPKGPKG 1307
Query: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 585
G+ + ++ K +R G G PG VG PG G+ G G G
Sbjct: 1308 DQGIPGFSGLPGELGLKG-MRGEPGF-MGTPGK---VGPPGDPGFPGMKGKAGPRGSSGL 1362
Query: 586 GAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
PG A+A + VP G LG G GIPG + P A +K G
Sbjct: 1363 QGDPGQTPTAEAVQ----VPP--GPLGLPGIDGIPG--LTGDPGAQGPVGLQGSKGLP-G 1413
Query: 646 LVGAAGLGGL--GVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 689
+ G G GL G LG PG+ GL G P A + +G+ PG
Sbjct: 1414 IPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPG 1461
Score = 138 bits (347), Expect = 2e-32
Identities = 209/707 (29%), Positives = 253/707 (35%), Gaps = 155/707 (21%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPG-----GVPGAI-PGGVPGGVFYPGA-GLGALGG 53
+ GL +PG+L P PG G PG+ P G+ G PGA G + G
Sbjct: 781 LPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISG 840
Query: 54 GALGPGGKPLKPVPGGLAGAGLGAGLGAFPA----VTFPGALVPGGVAD--AAAAYKAAK 107
G + K PG + GL GL P V G+ GVA A + K K
Sbjct: 841 HPGKKGTRGKKGPPGSIVKKGL-PGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEK 899
Query: 108 AGAGLGGVPGVGGL-------GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGV- 159
G G PG+ GL G+ P G + P AG PG+ G PG P G+
Sbjct: 900 GSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGT-PGEKGDRGNPG--PVGIP 956
Query: 160 -------------------------LPGAR-------------FPGVGVLPGVPTGAGVK 181
PG R PG LPG+ G K
Sbjct: 957 SPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGK 1016
Query: 182 PKAPGVGGAFAGIPGV----GPFGGP-QPGVPLGYPIK-APKLPGGYGLPYTTGKL---- 231
P PG G G+PG+ G G P PG I+ +P LPG GLP G
Sbjct: 1017 PGPPGFMG-IRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTV 1075
Query: 232 -------PYGY-GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 283
P G G G G G+ G G + G A PGV
Sbjct: 1076 EISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVA 1135
Query: 284 GA-GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF----GPGV 338
G G PG+PG+ G I +G+P +G +PG G GP +
Sbjct: 1136 GMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNG--LPGTKGTHGTPGPSI 1193
Query: 339 VGVPG-AGVPGV----GVPGAGI--PVVPG----------------AGIPGAAVPGVVSP 375
GVPG AG+PG G PG GI P PG AG+PGA PG+ P
Sbjct: 1194 TGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGA--PGISLP 1251
Query: 376 EAAAKAAAKAAKYG-----ARPG-VGVGGIP--TYGVGAGGFPGFGVGVGGIPGVAGVPG 427
A + G RPG G G P + G G PGF GIPG G G
Sbjct: 1252 SLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFP----GIPGPKGPKG 1307
Query: 428 VGGVPGVGGVPG-VGISP-EAQAAAAAKAAKYGV-GTPAAAAAKA-AAKAAQFGLVPGVG 483
G+PG G+PG +G+ + K G G P K A GL G
Sbjct: 1308 DQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPG 1367
Query: 484 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 543
P A V V PG PG+ PG+ PG GP G
Sbjct: 1368 QTP---TAEAVQVPPGPLGLPGIDGIPGLTGDPGAQ-----GPVG--------------- 1404
Query: 544 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG 590
L+ + GL GIPG G+PG G PGL G PGF PG
Sbjct: 1405 -LQGSKGL-PGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPG 1449
Score = 129 bits (325), Expect = 7e-30
Identities = 219/819 (26%), Positives = 292/819 (35%), Gaps = 205/819 (25%)
Query: 54 GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLG 113
G GP G P G G+ +GL FPG L P G K G
Sbjct: 50 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERG--FPGLLGPYG----------PKGDKGPM 97
Query: 114 GVPGVGGLGVSAAPSVPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171
GVPG LG++ P PG P+ PG G VG PG P G +PG+
Sbjct: 98 GVPGF--LGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPG--PDG------YPGLLGP 147
Query: 172 PGVPTGAGVK----------------PKAPGVGG-----AFAGIPG-VGPFGGP----QP 205
PG+P G K P PG+ G G PG VGP G P P
Sbjct: 148 PGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPP 207
Query: 206 GVP--------LGYPIKAPK-------LPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYP 250
G P +G + K LPG G P +TG+L + P G G+ G+ G
Sbjct: 208 GPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPK 267
Query: 251 TGTGVGPQAAAAAAAKAAAKFGAGAAGV--LPG----VGGAGVPGVPG--------AIPG 296
G+ K G G+ LPG +G GV G PG PG
Sbjct: 268 GFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPG 327
Query: 297 IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG------------- 343
+ G G+ A ++ G PG PGV G+PG
Sbjct: 328 LNGFQGIEGQKGDIGLPGPDVFIDIDGA--VISGNPG-DPGVPGLPGLKGDEGIQGLRGP 384
Query: 344 AGVPGV----GVPGA----GIPVVPG------------AGIPG-------AAVPGVVSPE 376
+GVPG+ GVPGA G P + G AG+PG PG SPE
Sbjct: 385 SGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPE 444
Query: 377 AAAKA--------AAKAAKYGARPGVGV-------------GGIPTYG-VGAGGFPG-FG 413
+ + G + +G+ GG+P G G G PG +G
Sbjct: 445 FETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWG 504
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAK 472
+G+ G+ G G G GG G G PG+ + P + K + + T
Sbjct: 505 LIGLPGLKGARGDRGSGGAQGPAGAPGL-VGPLGPSGPKGKKGEPILSTIQGMPGDRGDS 563
Query: 473 AAQ--FGLV--PGVGVAPGVGVAPGVGVAPGVGL--------APGVGVAPGVGVAPGVGV 520
+Q G++ PG PG+ PG+ G G PG PG PG G+
Sbjct: 564 GSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGL 623
Query: 521 APGI-GPGGVAAAAKSAAKVAAKAQLRAAAG--LGAGIPGLGVGVGVPGLGVGAGVPGLG 577
PG+ GP G+ K + + L + G L IPG G PG G PG
Sbjct: 624 -PGLPGPRGL-PGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGT---PGFPGPK 678
Query: 578 VGAGVPGFGAVPGALAA-----AKAAKYGAAVPGVLGGLGALGGVGIPG--------GVV 624
G+PG PG+ + + + +PG G G G G PG G++
Sbjct: 679 GSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMI 738
Query: 625 GAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG-----VGGLGVPGVGGLGGIP------- 672
G+ + A A+ G G GL GL +G G+PG+ G+ G P
Sbjct: 739 GSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKG 798
Query: 673 -------------PAAAAKAAKYGVAARPGFGLSPIFPG 698
P + YG+ + G +P FPG
Sbjct: 799 ERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPG 837
Score = 120 bits (302), Expect = 3e-27
Identities = 164/535 (30%), Positives = 211/535 (39%), Gaps = 99/535 (18%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT- 86
G PG P G+PG PG G G KP P G G GL +T
Sbjct: 993 GRPG--PPGLPGAPGLPGIIKGVSG-----------KPGPPGFMGIRGLPGLKGSSGITG 1039
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-----LGVSAAPSVPGAVVPQPG-AG 140
FPG +PG + + + G G+PG+ G + +S +P G QPG +G
Sbjct: 1040 FPG--MPG--ESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKG----QPGESG 1091
Query: 141 VK-----PGKVPGVGLPGVYPG----GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAF 191
K G + +G PG GV PG PG P AG++ + PG+ G+
Sbjct: 1092 FKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGA---PGFPGVAGMRGE-PGLPGSS 1147
Query: 192 AGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTG-------KLPYGYGPGGVAGAA 244
+GP G P P G+P P L G GLP T G + GP G+ G
Sbjct: 1148 GHQGAIGPLGSPGLIGPKGFP-GFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPK 1206
Query: 245 GKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGG-AGVPGVPG-AIPGIGGIAG 302
G+ GYP G G+G A K + G G PG+ G AG+PG PG ++P + IAG
Sbjct: 1207 GEKGYP-GIGIG------APGKPGLRGQKGDRG-FPGLQGPAGLPGAPGISLPSL--IAG 1256
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-------GVPG- 353
P + + G A P GP G G PG G+PG G+PG
Sbjct: 1257 --QPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIPGF 1314
Query: 354 AGIPVVPGA----GIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGG 408
+G+P G G PG PG V P K G R G+ G P G
Sbjct: 1315 SGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDP-------G 1367
Query: 409 FPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAK 468
V PG G+PG+ G+PG+ G PG AQ + +K G P
Sbjct: 1368 QTPTAEAVQVPPGPLGLPGIDGIPGLTGDPG------AQGPVGLQGSKGLPGIP------ 1415
Query: 469 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
K GL PG A G PG+ PG APG G+ PG + G
Sbjct: 1416 --GKDGPSGL-PGPPGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPGQSMRVG 1467
Score = 89.0 bits (219), Expect = 1e-17
Identities = 154/550 (28%), Positives = 192/550 (34%), Gaps = 110/550 (20%)
Query: 198 GPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYG----YGPGGVAGAAGKAGYPT 251
GP G P P G+ L G G P G PYG GP GV G G G P
Sbjct: 53 GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLG--PYGPKGDKGPMGVPGFLGINGIPG 110
Query: 252 GTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GTPA 307
G GP+ G G VG G G PG + PG+ G G G P
Sbjct: 111 HPGQPGPRGPPGLD---------GCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGA--GI 364
A + K G PG PG+ G+ G G PG PGA P P G
Sbjct: 162 LAPGSFKGMK------------GDPGL-PGLDGITGPQGAPGF--PGAVGPAGPPGLQGP 206
Query: 365 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGV 422
PG PG + P+ + K G + VG+ G P G F GF G G G
Sbjct: 207 PGP--PGPLGPDGNMGLGFQGEK-GVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGE 263
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 482
G G G+ G G PG+G + E K K G P + + PG
Sbjct: 264 PGPKGFPGISGPPGFPGLGTTGE-------KGEKGEKGIPGLPGPRGPMGSEGVQGPPGQ 316
Query: 483 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV---APGVGVAPGIGPGGVAAAAKSAAKV 539
G PG+ G+ G PG V G ++ G GV
Sbjct: 317 QGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVP--------- 367
Query: 540 AAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 599
G+PGL G+ GL +GVPGL +GVPG P K +
Sbjct: 368 --------------GLPGLKGDEGIQGLRGPSGVPGLPALSGVPG-ALGPQGFPGLKGDQ 412
Query: 600 YGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAA-AKAAQF-GLVGAAG-LGGLG 656
G +G G G G+PG GP + + K + F GL G G G LG
Sbjct: 413 -GNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLG 471
Query: 657 VGGL----------------------GVPGVGGLGGIPPAAAAKAAK-----YGVAARPG 689
+ G+ G PG GL G+P A+ + G A PG
Sbjct: 472 LKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPG 531
Query: 690 FGLSPIFPGG 699
+ P+ P G
Sbjct: 532 L-VGPLGPSG 540
>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
sapiens]
Length = 1690
Score = 167 bits (424), Expect = 2e-41
Identities = 223/739 (30%), Positives = 284/739 (38%), Gaps = 107/739 (14%)
Query: 28 GVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
G+PG +PG G PG PG GL L G PG K +PG GL G
Sbjct: 601 GLPG-LPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQ---QGLPGSKGITLPC 656
Query: 86 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAAPSVPGAV-VPQ-PGAGVK 142
PG+ P G + K GL G PG G G P PG V +P+ PG
Sbjct: 657 IIPGSYGPSGFP-GTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGF--- 712
Query: 143 PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVP-----TGA--GVKPKAPGVGG----- 189
PG GLPG +PG LPG PG+ PG+P TG G + APG G
Sbjct: 713 PGPRGEKGLPG-FPG--LPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLT 769
Query: 190 ------AFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAG 242
+G+PG+ G G P P G +P PG G P T G GP G+ G
Sbjct: 770 GHKGFLGDSGLPGLKGVHGKPGLLGPKGER-GSPGTPGQVGQPGTPGSS----GPYGIKG 824
Query: 243 AAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 302
+G G P G+ + K + G G + G G+ G+PG PG+ G+ G
Sbjct: 825 KSGLPGAPGFPGI-----SGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGN-PGLVGLKG 878
Query: 303 V-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG----VGVPG 353
G+P A A + + G+ G V G PG PG+ G+PG G+PG +G G
Sbjct: 879 SPGSPGVAGLPALSGPKGEKGSV-GFV-GFPGI-PGLPGIPGTRGLKGIPGSTGKMGPSG 935
Query: 354 -AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP----------- 400
AG P G G PG G+ SP G++ G G P
Sbjct: 936 RAGTPGEKGDRGNPGPV--GIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGR 993
Query: 401 --TYGV-GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G+ GA G PG GV G PG G G+ G+PG+ G G+ P + ++ +
Sbjct: 994 PGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRG 1053
Query: 458 GVGTPAAAAAKAA----AKAAQFGLVPGVGVAPGVGVAPGV----GVAPGVGLAPGVGVA 509
G P A+ + + PG PG G G+ +G G
Sbjct: 1054 SPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGED 1113
Query: 510 PGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA----------GIPGLG 559
VGV+ VG+ G GVA + A LG+ G PGL
Sbjct: 1114 GKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLH 1173
Query: 560 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 619
G+PG G PG + GVPG +PG G PG G G G G
Sbjct: 1174 GLNGLPGTKGTHGTPGPSI-TGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGF 1232
Query: 620 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 679
PG AG A + + A Q G G GL G G PG G PP +
Sbjct: 1233 PGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLD----GERGRPGPAG----PPGPPGPS 1284
Query: 680 AKYGVAARPGFGLSPIFPG 698
+ G PGF P PG
Sbjct: 1285 SNQGDTGDPGF---PGIPG 1300
Score = 142 bits (358), Expect = 1e-33
Identities = 228/803 (28%), Positives = 291/803 (36%), Gaps = 175/803 (21%)
Query: 20 ILHPSRPGGVPGAI-PGGVPGGVFYPG----------AGLGALGG-------GALGPGGK 61
I P G PGA+ P G PG PG GLG G G GP G
Sbjct: 181 ITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGP 240
Query: 62 P-------LKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGG 114
P P G G+ G FP ++ P PG K K G+ G
Sbjct: 241 PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGP----PGFPGLGTTGEKGEKGEKGIPG 296
Query: 115 VPG----VGGLGVSAAPSVPG--AVVPQPG----AGVKPGKVPGVGLPGV-----YPGGV 159
+PG +G GV P G + PG G++ G+ +GLPG G V
Sbjct: 297 LPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIE-GQKGDIGLPGPDVFIDIDGAV 355
Query: 160 LPG-ARFPGVGVLPGVPTGAGVKP-KAP-GVGG--AFAGIPG-VGPFGGP----QPGVPL 209
+ G PGV LPG+ G++ + P GV G A +G+PG +GP G P G P
Sbjct: 356 ISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPG 415
Query: 210 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG-----------KAGYPTGTG-VGP 257
I A LPG GLP GP G G ++G+P G GP
Sbjct: 416 RTTIGAAGLPGRDGLP----------GPPGPPGPPSPEFETETLHNKESGFPGLRGEQGP 465
Query: 258 QA-AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAG--------- 302
+ K + F A GV P G G PG PG +PG+ G G
Sbjct: 466 KGNLGLKGIKGDSGFCACDGGV-PNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQG 524
Query: 303 -VGTPAAAAAAAAAAKAAKYG-AAAGLVPGGPGFG--------PGVVGVPGA-GVPGV-G 350
G P + K G + G PG GV+G PG GVPG+ G
Sbjct: 525 PAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPG 584
Query: 351 VPG------------AGIPVVPG-------AGIPGAAVPGVVSPEAAAKAAAKAAKYGAR 391
+PG G+P +PG G+PG +PG+ P K G +
Sbjct: 585 LPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQ 644
Query: 392 PGVGVGGI-----------PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV 440
G GI P+ G GFPG G G+PG G PG G G G PG+
Sbjct: 645 GLPGSKGITLPCIIPGSYGPSGFPGTPGFPG-PKGSRGLPGTPGQPGSSGSKGEPGSPGL 703
Query: 441 GISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGV 500
PE + K G P +PG PG+ +PG+ + G
Sbjct: 704 VHLPELPGFPGPRGEKGLPGFPG---------------LPGKDGLPGMIGSPGLPGSKGA 748
Query: 501 --GLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 557
+ APG G+ G +G G+ V K L G G PG
Sbjct: 749 TGDIFGAENGAPGEQGLQGLTGHKGFLGDSGL----PGLKGVHGKPGLLGPKG-ERGSPG 803
Query: 558 LGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGAAV----PG 606
VG PG +G G+ +G+PG PG K G+ V PG
Sbjct: 804 TPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPG 863
Query: 607 VLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 666
+ G G G VG+ G G A A + + G VG G+ GL G+PG
Sbjct: 864 LKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLP----GIPGTR 919
Query: 667 GLGGIPPAAAAKAAKYGVAARPG 689
GL GI P + K G A PG
Sbjct: 920 GLKGI-PGSTGKMGPSGRAGTPG 941
Score = 140 bits (354), Expect = 3e-33
Identities = 227/768 (29%), Positives = 288/768 (37%), Gaps = 133/768 (17%)
Query: 23 PSRPG--GVPGAI-----PG--GVPGGVF-----YPGA-GLGALGG--GALGPGGKP-LK 64
P PG G+PG I PG G G +F PG GL L G G LG G P LK
Sbjct: 725 PGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLK 784
Query: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL--- 121
V G GL G + PG + G ++ Y K +GL G PG G+
Sbjct: 785 GVHGK---PGLLGPKGERGSPGTPGQVGQPGTPGSSGPY-GIKGKSGLPGAPGFPGISGH 840
Query: 122 ----GVSAAPSVPGAVVPQPGAGVK--PGKVPGVGL------PGVYPGGVLPGAR----- 164
G PG++V + G+K PG VGL PGV L G +
Sbjct: 841 PGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGS 900
Query: 165 -----FPGVGVLPGVPTGAGVKPKAPGVGGAF-----AGIPGV-------GPFGGPQPGV 207
FPG+ LPG+P G+K PG G AG PG GP G P P
Sbjct: 901 VGFVGFPGIPGLPGIPGTRGLKG-IPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRR 959
Query: 208 PLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAK 266
P+ +K K G G + G P G G AG G G P G+ P + K
Sbjct: 960 PMSNLWLKGDK--GSQGSAGSNG-FPGPRGDKGEAGRPGPPGLPGAPGL-PGIIKGVSGK 1015
Query: 267 AAAKFGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAA 324
G G LPG+ G +G+ G PG +PG G G+ G+P A+ G
Sbjct: 1016 PGPPGFMGIRG-LPGLKGSSGITGFPG-MPGESGSQGIRGSPGLPGASGLPGLKGDNGQT 1073
Query: 325 AGLVPG-GPGFGPGVVGVPGAG-----VPGVGVPG-----AGIPVVPGAGIPGA-AVPGV 372
+ GP PG G G + +G PG + V G+PGA PGV
Sbjct: 1074 VEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV 1133
Query: 373 VSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF-GV-GVGGIPG--------- 421
+ GA +G G+ +G GFPGF G+ G+ G+PG
Sbjct: 1134 AGMRGEPGLPGSSGHQGAIGPLGSPGL----IGPKGFPGFPGLHGLNGLPGTKGTHGTPG 1189
Query: 422 --VAGVPGVGGVPGVGG---VPGVGISPEAQAAAAAKAAKYG-------VGTPAAAAAKA 469
+ GVPG G+PG G PG+GI + + G G P A
Sbjct: 1190 PSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISL 1249
Query: 470 AAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI----G 525
+ A PG G PG PG PG G PG PG G
Sbjct: 1250 PSLIAGQPGDPGRPGLDGERGRPGPAGPPG---PPGPSSNQGDTGDPGFPGIPGPKGPKG 1306
Query: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 585
G+ + ++ K +R G G PG VG PG G+ G G G
Sbjct: 1307 DQGIPGFSGLPGELGLKG-MRGEPGF-MGTPGK---VGPPGDPGFPGMKGKAGPRGSSGL 1361
Query: 586 GAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
PG A+A + VP G LG G GIPG + P A +K G
Sbjct: 1362 QGDPGQTPTAEAVQ----VPP--GPLGLPGIDGIPG--LTGDPGAQGPVGLQGSKGLP-G 1412
Query: 646 LVGAAGLGGL--GVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 689
+ G G GL G LG PG+ GL G P A + +G+ PG
Sbjct: 1413 IPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPG 1460
Score = 138 bits (347), Expect = 2e-32
Identities = 209/707 (29%), Positives = 253/707 (35%), Gaps = 155/707 (21%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPG-----GVPGAI-PGGVPGGVFYPGA-GLGALGG 53
+ GL +PG+L P PG G PG+ P G+ G PGA G + G
Sbjct: 780 LPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISG 839
Query: 54 GALGPGGKPLKPVPGGLAGAGLGAGLGAFPA----VTFPGALVPGGVAD--AAAAYKAAK 107
G + K PG + GL GL P V G+ GVA A + K K
Sbjct: 840 HPGKKGTRGKKGPPGSIVKKGL-PGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEK 898
Query: 108 AGAGLGGVPGVGGL-------GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGV- 159
G G PG+ GL G+ P G + P AG PG+ G PG P G+
Sbjct: 899 GSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGT-PGEKGDRGNPG--PVGIP 955
Query: 160 -------------------------LPGAR-------------FPGVGVLPGVPTGAGVK 181
PG R PG LPG+ G K
Sbjct: 956 SPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGK 1015
Query: 182 PKAPGVGGAFAGIPGV----GPFGGP-QPGVPLGYPIK-APKLPGGYGLPYTTGKL---- 231
P PG G G+PG+ G G P PG I+ +P LPG GLP G
Sbjct: 1016 PGPPGFMG-IRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTV 1074
Query: 232 -------PYGY-GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 283
P G G G G G+ G G + G A PGV
Sbjct: 1075 EISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVA 1134
Query: 284 GA-GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF----GPGV 338
G G PG+PG+ G I +G+P +G +PG G GP +
Sbjct: 1135 GMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNG--LPGTKGTHGTPGPSI 1192
Query: 339 VGVPG-AGVPGV----GVPGAGI--PVVPG----------------AGIPGAAVPGVVSP 375
GVPG AG+PG G PG GI P PG AG+PGA PG+ P
Sbjct: 1193 TGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGA--PGISLP 1250
Query: 376 EAAAKAAAKAAKYG-----ARPG-VGVGGIP--TYGVGAGGFPGFGVGVGGIPGVAGVPG 427
A + G RPG G G P + G G PGF GIPG G G
Sbjct: 1251 SLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFP----GIPGPKGPKG 1306
Query: 428 VGGVPGVGGVPG-VGISP-EAQAAAAAKAAKYGV-GTPAAAAAKA-AAKAAQFGLVPGVG 483
G+PG G+PG +G+ + K G G P K A GL G
Sbjct: 1307 DQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPG 1366
Query: 484 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 543
P A V V PG PG+ PG+ PG GP G
Sbjct: 1367 QTP---TAEAVQVPPGPLGLPGIDGIPGLTGDPGAQ-----GPVG--------------- 1403
Query: 544 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG 590
L+ + GL GIPG G+PG G PGL G PGF PG
Sbjct: 1404 -LQGSKGL-PGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPG 1448
Score = 129 bits (325), Expect = 7e-30
Identities = 219/819 (26%), Positives = 292/819 (35%), Gaps = 205/819 (25%)
Query: 54 GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLG 113
G GP G P G G+ +GL FPG L P G K G
Sbjct: 49 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERG--FPGLLGPYG----------PKGDKGPM 96
Query: 114 GVPGVGGLGVSAAPSVPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171
GVPG LG++ P PG P+ PG G VG PG P G +PG+
Sbjct: 97 GVPGF--LGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPG--PDG------YPGLLGP 146
Query: 172 PGVPTGAGVK----------------PKAPGVGG-----AFAGIPG-VGPFGGP----QP 205
PG+P G K P PG+ G G PG VGP G P P
Sbjct: 147 PGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPP 206
Query: 206 GVP--------LGYPIKAPK-------LPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYP 250
G P +G + K LPG G P +TG+L + P G G+ G+ G
Sbjct: 207 GPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPK 266
Query: 251 TGTGVGPQAAAAAAAKAAAKFGAGAAGV--LPG----VGGAGVPGVPG--------AIPG 296
G+ K G G+ LPG +G GV G PG PG
Sbjct: 267 GFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPG 326
Query: 297 IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG------------- 343
+ G G+ A ++ G PG PGV G+PG
Sbjct: 327 LNGFQGIEGQKGDIGLPGPDVFIDIDGA--VISGNPG-DPGVPGLPGLKGDEGIQGLRGP 383
Query: 344 AGVPGV----GVPGA----GIPVVPG------------AGIPG-------AAVPGVVSPE 376
+GVPG+ GVPGA G P + G AG+PG PG SPE
Sbjct: 384 SGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPE 443
Query: 377 AAAKA--------AAKAAKYGARPGVGV-------------GGIPTYG-VGAGGFPG-FG 413
+ + G + +G+ GG+P G G G PG +G
Sbjct: 444 FETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWG 503
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAK 472
+G+ G+ G G G GG G G PG+ + P + K + + T
Sbjct: 504 LIGLPGLKGARGDRGSGGAQGPAGAPGL-VGPLGPSGPKGKKGEPILSTIQGMPGDRGDS 562
Query: 473 AAQ--FGLV--PGVGVAPGVGVAPGVGVAPGVGL--------APGVGVAPGVGVAPGVGV 520
+Q G++ PG PG+ PG+ G G PG PG PG G+
Sbjct: 563 GSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGL 622
Query: 521 APGI-GPGGVAAAAKSAAKVAAKAQLRAAAG--LGAGIPGLGVGVGVPGLGVGAGVPGLG 577
PG+ GP G+ K + + L + G L IPG G PG G PG
Sbjct: 623 -PGLPGPRGL-PGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGT---PGFPGPK 677
Query: 578 VGAGVPGFGAVPGALAA-----AKAAKYGAAVPGVLGGLGALGGVGIPG--------GVV 624
G+PG PG+ + + + +PG G G G G PG G++
Sbjct: 678 GSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMI 737
Query: 625 GAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG-----VGGLGVPGVGGLGGIP------- 672
G+ + A A+ G G GL GL +G G+PG+ G+ G P
Sbjct: 738 GSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKG 797
Query: 673 -------------PAAAAKAAKYGVAARPGFGLSPIFPG 698
P + YG+ + G +P FPG
Sbjct: 798 ERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPG 836
Score = 120 bits (302), Expect = 3e-27
Identities = 164/535 (30%), Positives = 211/535 (39%), Gaps = 99/535 (18%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT- 86
G PG P G+PG PG G G KP P G G GL +T
Sbjct: 992 GRPG--PPGLPGAPGLPGIIKGVSG-----------KPGPPGFMGIRGLPGLKGSSGITG 1038
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-----LGVSAAPSVPGAVVPQPG-AG 140
FPG +PG + + + G G+PG+ G + +S +P G QPG +G
Sbjct: 1039 FPG--MPG--ESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKG----QPGESG 1090
Query: 141 VK-----PGKVPGVGLPGVYPG----GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAF 191
K G + +G PG GV PG PG P AG++ + PG+ G+
Sbjct: 1091 FKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGA---PGFPGVAGMRGE-PGLPGSS 1146
Query: 192 AGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTG-------KLPYGYGPGGVAGAA 244
+GP G P P G+P P L G GLP T G + GP G+ G
Sbjct: 1147 GHQGAIGPLGSPGLIGPKGFP-GFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPK 1205
Query: 245 GKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGG-AGVPGVPG-AIPGIGGIAG 302
G+ GYP G G+G A K + G G PG+ G AG+PG PG ++P + IAG
Sbjct: 1206 GEKGYP-GIGIG------APGKPGLRGQKGDRG-FPGLQGPAGLPGAPGISLPSL--IAG 1255
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-------GVPG- 353
P + + G A P GP G G PG G+PG G+PG
Sbjct: 1256 --QPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIPGF 1313
Query: 354 AGIPVVPGA----GIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGG 408
+G+P G G PG PG V P K G R G+ G P G
Sbjct: 1314 SGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDP-------G 1366
Query: 409 FPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAK 468
V PG G+PG+ G+PG+ G PG AQ + +K G P
Sbjct: 1367 QTPTAEAVQVPPGPLGLPGIDGIPGLTGDPG------AQGPVGLQGSKGLPGIP------ 1414
Query: 469 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
K GL PG A G PG+ PG APG G+ PG + G
Sbjct: 1415 --GKDGPSGL-PGPPGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPGQSMRVG 1466
Score = 89.0 bits (219), Expect = 1e-17
Identities = 154/550 (28%), Positives = 192/550 (34%), Gaps = 110/550 (20%)
Query: 198 GPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYG----YGPGGVAGAAGKAGYPT 251
GP G P P G+ L G G P G PYG GP GV G G G P
Sbjct: 52 GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLG--PYGPKGDKGPMGVPGFLGINGIPG 109
Query: 252 GTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GTPA 307
G GP+ G G VG G G PG + PG+ G G G P
Sbjct: 110 HPGQPGPRGPPGLD---------GCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGA--GI 364
A + K G PG PG+ G+ G G PG PGA P P G
Sbjct: 161 LAPGSFKGMK------------GDPGL-PGLDGITGPQGAPGF--PGAVGPAGPPGLQGP 205
Query: 365 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGV 422
PG PG + P+ + K G + VG+ G P G F GF G G G
Sbjct: 206 PGP--PGPLGPDGNMGLGFQGEK-GVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGE 262
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 482
G G G+ G G PG+G + E K K G P + + PG
Sbjct: 263 PGPKGFPGISGPPGFPGLGTTGE-------KGEKGEKGIPGLPGPRGPMGSEGVQGPPGQ 315
Query: 483 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV---APGVGVAPGIGPGGVAAAAKSAAKV 539
G PG+ G+ G PG V G ++ G GV
Sbjct: 316 QGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVP--------- 366
Query: 540 AAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 599
G+PGL G+ GL +GVPGL +GVPG P K +
Sbjct: 367 --------------GLPGLKGDEGIQGLRGPSGVPGLPALSGVPG-ALGPQGFPGLKGDQ 411
Query: 600 YGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAA-AKAAQF-GLVGAAG-LGGLG 656
G +G G G G+PG GP + + K + F GL G G G LG
Sbjct: 412 -GNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLG 470
Query: 657 VGGL----------------------GVPGVGGLGGIPPAAAAKAAK-----YGVAARPG 689
+ G+ G PG GL G+P A+ + G A PG
Sbjct: 471 LKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPG 530
Query: 690 FGLSPIFPGG 699
+ P+ P G
Sbjct: 531 L-VGPLGPSG 539
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 166 bits (421), Expect = 5e-41
Identities = 222/702 (31%), Positives = 263/702 (37%), Gaps = 94/702 (13%)
Query: 54 GALGPGGKPLKPVPGGLAG------AGLGAGLGAFPAVTFPGALVPGGVADAAAA--YKA 105
G GP G P P P GL G G G GLG P G + P G AA A +
Sbjct: 57 GPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPM----GLMGPRGPPGAAGAPGPQG 112
Query: 106 AKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGV----------GLPGVY 155
+ AG G PG G + P+ P + G KPG+ PG G PG
Sbjct: 113 FQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGR-PGERGVVGPQGARGFPGT- 170
Query: 156 PGGVLPGAR----FPGVGVLPGVPTGAGVK--PKAPGVGG-----AFAGIPGV-GPFGGP 203
PG LPG + G+ L G P GVK P APG G G+PG G G P
Sbjct: 171 PG--LPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAP 228
Query: 204 QPGVPLGY-----------PIKAPKLPGGYGLPYTTGKLPY--GYGPGGVAGAAGKAGYP 250
P G PI + PG G P G++ GP G AG G+ G P
Sbjct: 229 GPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLP 288
Query: 251 TGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGGIAG------ 302
+G VGP A AK GAAG LPGV GA G+PG P IPG G AG
Sbjct: 289 GLSGPVGPPGNPGANGLTGAK---GAAG-LPGVAGAPGLPG-PRGIPGPVGAAGATGARG 343
Query: 303 -VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVP 360
VG P A + + + G+A P GP G G P G PG G+ P
Sbjct: 344 LVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRG-PNGEAGSAGPPGPPGLRGSP 402
Query: 361 GA-GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF--GVGV 416
G+ G+PGA GV+ P + A+ A G G G P +G G PG +G
Sbjct: 403 GSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGL-MGPRGLPGSPGNIGP 461
Query: 417 GGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQF 476
G G G+PG+ G PG G G P K G P K A A
Sbjct: 462 AGKEGPVGLPGIDGRPGPIGPAGARGEP---GNIGFPGPKGPTGDPGKNGDKGHAGLAGA 518
Query: 477 GLVPGVGVAPGVGVAPG-VGVAPGVGL-----APGVGVAPGVGVAPGVGVAPG----IGP 526
PG G PG GV G G PG PG G PG G
Sbjct: 519 RGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGE 578
Query: 527 GGVAAAAKSAAKVAAKAQLRAAAGLG-------AGIPGLGVGVGVPGLGVGAGVPGLGVG 579
G+ A + + AA G +G PG G PG+ G G
Sbjct: 579 FGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP 638
Query: 580 AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAA 639
+G+PG G + K K + G +G G G G PG V GPA A A
Sbjct: 639 SGLPGERGAAG-IPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAG 697
Query: 640 KAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAK 681
A G G G G G +G G G G AA AK
Sbjct: 698 AAGPAGPAGPRGSPG-ERGEVGPAGPNGFAGPAGAAGQPGAK 738
Score = 160 bits (405), Expect = 4e-39
Identities = 230/716 (32%), Positives = 266/716 (37%), Gaps = 95/716 (13%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
P G PG G PG PGA A G +GP G P G+ G AG P +
Sbjct: 392 PPGPPGL--RGSPGSRGLPGADGRA---GVMGPPGSRGASGPAGVRGPNGDAGRPGEPGL 446
Query: 86 TFPGALVPGGVADAAAAYKAAKAGA-GLGGVPG-VGGLGVSAAPSVPGAVVPQPGAGVKP 143
P L PG + A K G G+ G PG +G G P G P+ G P
Sbjct: 447 MGPRGL-PGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTG-DP 504
Query: 144 GKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFA--GIPGVGPF 200
GK G G L GAR PG P GA P GV G G PG F
Sbjct: 505 GKNGDKGHAG------LAGARGAPG----PDGNNGAQGPPGPQGVQGGKGEQGPPGPPGF 554
Query: 201 GG-PQPGVPLGYPIKAPK--LPGGYGLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTG-- 254
G P P P G K + L G +GLP G P G GP G +GAAG G P G+
Sbjct: 555 QGLPGPSGPAGEVGKPGERGLHGEFGLPGPAG--PRGERGPPGESGAAGPTG-PIGSRGP 611
Query: 255 ---------------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGI 297
VG A + + GAAG+ G G G PG+ G I PG
Sbjct: 612 SGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGR 671
Query: 298 GGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGI 356
G G G A A A + GAA P GP PG G G P AG
Sbjct: 672 DGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGA 731
Query: 357 PVVPGA-GIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGV----GVGGIPTYGVGAG 407
PGA G GA P GVV P AA A G PG G GG P G
Sbjct: 732 AGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGP-PGPAGSRGDGGPP----GMT 786
Query: 408 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG-VGTPAAAA 466
GFPG G G PG +G+ G G PG G G+ P + + G VG P A
Sbjct: 787 GFPG-AAGRTGPPGPSGISGPPGPPGPAGKEGLR-GPRGDQGPVGRTGEVGAVGPPGFAG 844
Query: 467 AKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGV-GVAPGVGVAPGVGVAPGIG 525
K + A PG G+ APG+ PG G+ GVA VG +G+A G
Sbjct: 845 EKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPG 904
Query: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 585
G A S G PG G PG G PG G G
Sbjct: 905 ARGPPGAVGSPGV--------------NGAPGEAGRDGNPG---NDGPPGRDGQPGHKGE 947
Query: 586 GAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
PG + A A PG G +G G G G +GP A A + G
Sbjct: 948 RGYPGNIGPVGA----AGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQG 1003
Query: 646 LVGAAG-LGGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGG 699
+ G G G G GL G+ G GL G+P A +G PG + P P G
Sbjct: 1004 IRGDKGEPGEKGPRGLPGLKGHNGLQGLP----GIAGHHGDQGAPG-SVGPAGPRG 1054
Score = 134 bits (337), Expect = 3e-31
Identities = 176/562 (31%), Positives = 206/562 (36%), Gaps = 64/562 (11%)
Query: 172 PGVPTGAGVKPKAPGVGGAFAG-IPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK 230
P P G P PG+GG FA G G GP P +G + P PG G P
Sbjct: 58 PTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGP--RGP--PGAAGAP----- 108
Query: 231 LPYGYGPGGVAGAAGKAGYPTGTG-------VGPQAAAAAAAKAAAKFGAGAAGVLPGVG 283
GP G G AG+ G P TG GP A G GV+ G
Sbjct: 109 -----GPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQG 163
Query: 284 GAGVPGVPGAIPGIGGIAG-------VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGP 336
G PG PG +PG GI G G P A + G G
Sbjct: 164 ARGFPGTPG-LPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGER 222
Query: 337 GVVGVPG-AGVPG----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGAR 391
G VG PG AG G VG G P+ AG PG PG P+ A A G
Sbjct: 223 GRVGAPGPAGARGSDGSVGPVGPAGPI-GSAGPPG--FPGAPGPKGEIGAVGNAGPAGPA 279
Query: 392 PGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAA 451
G G+P G G PG G G+ G G G+ GV G G+PG P AA
Sbjct: 280 GPRGEVGLPGLS-GPVGPPG-NPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAG 337
Query: 452 AKAAKYGVGTPAAAAAKAAA-------KAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAP 504
A A+ VG P A +K + A G PG G G + G P
Sbjct: 338 ATGARGLVGEPGPAGSKGESGNKGEPGSAGPQG-PPGPSGEEGKRGPNGEAGSAGPPGPP 396
Query: 505 GVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 563
G+ +PG PG G A +GP G ++ A+ A AG G PGL G
Sbjct: 397 GLRGSPGSRGLPGADGRAGVMGPPG----SRGASGPAGVRGPNGDAG-RPGEPGLMGPRG 451
Query: 564 VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGV 623
+PG G G G+PG PG + A A PG +G G G G PG
Sbjct: 452 LPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGA----RGEPGNIGFPGPKGPTGDPGKN 507
Query: 624 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGI--PPAAAAKA 679
G A A A A G G G G+ G G G PG G G+ P A +
Sbjct: 508 GDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEV 567
Query: 680 AKYGVAARPG-FGL-SPIFPGG 699
K G G FGL P P G
Sbjct: 568 GKPGERGLHGEFGLPGPAGPRG 589
Score = 74.3 bits (181), Expect = 4e-13
Identities = 92/303 (30%), Positives = 107/303 (35%), Gaps = 35/303 (11%)
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-GVGTPAAAAAKAAAKA 473
G G G G PG G G G PG P AA+Y G G
Sbjct: 39 GPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGV------------ 86
Query: 474 AQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAA 532
GL PG G PG APG G PG G A G GP G A
Sbjct: 87 ---GLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGE 143
Query: 533 AKSAAKVAAKAQLRAAAGLGA----GIPGLG--VGV----GVPGLGVGAGVPGLGVGAGV 582
K + GA G PGL G+ G+ GL G PG+ G
Sbjct: 144 DGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGA 203
Query: 583 PGFGAVPGALAA----AKAAKYGAAVP-GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKA 637
PG PG A + + GA P G G G++G VG G + AGP A
Sbjct: 204 PGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGP 263
Query: 638 AAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPI 695
+ G G AG G G +G+PG+ G G P P A G A PG +P
Sbjct: 264 KGEIGAVGNAGPAGPAG-PRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPG 322
Query: 696 FPG 698
PG
Sbjct: 323 LPG 325
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 162 bits (410), Expect = 1e-39
Identities = 231/746 (30%), Positives = 265/746 (35%), Gaps = 108/746 (14%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAG----AGLGAG 78
P P G PG P G G PG + G GP G P KP G AG AG
Sbjct: 211 PPGPAGAPG--PQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGP 268
Query: 79 LGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAVVPQP 137
G A FPG GV G G PG+ G G + AP V G P
Sbjct: 269 PGPQGARGFPGTPGLPGVK-------------GHRGYPGLDGAKGEAGAPGVKGES-GSP 314
Query: 138 GAGVKPGKVPGVGLPG----VYPGGVLPGARF----PGVGVLPGV--PTGAGVKPKAPGV 187
G PG + GLPG P G GAR PG PG P G P APG
Sbjct: 315 GENGSPGPMGPRGLPGERGRTGPAGAA-GARGNDGQPGPAGPPGPVGPAGGPGFPGAPGA 373
Query: 188 GGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKA 247
G GP G P G P +P G G P T G +P G G G AG
Sbjct: 374 KGEAGPTGARGPEGAQGPRGEPGTP-GSPGPAGASGNPGTDG-IPGAKGSAGAPGIAGAP 431
Query: 248 GYPTGTGV-GPQAA---------------AAAAAKAAAKFGAGAAGVLPGVGGAGVPGVP 291
G+P G GPQ A A + K G AG G AG G
Sbjct: 432 GFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKR 491
Query: 292 GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV- 349
GA GG+ +G P A + G A GP PG G G AG G
Sbjct: 492 GARGEPGGVGPIGPPGERGAPGNRGFPGQDGLA------GPKGAPGERGPSGLAGPKGAN 545
Query: 350 GVPGA-GIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407
G PG G P +PGA G+ G PG P+ + + G RPG P GA
Sbjct: 546 GDPGRPGEPGLPGARGLTGR--PGDAGPQGKVGPSGAPGEDG-RPG------PPGPQGAR 596
Query: 408 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAA 467
G PG +G G G G PG G G+ G PG+ P A G
Sbjct: 597 GQPGV-MGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGE 655
Query: 468 KAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI--- 524
+ A + F +PG PG G PG PG APG+ G PG +PG
Sbjct: 656 QGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGL 715
Query: 525 -GPGGVAA-----AAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-----GVG--- 570
GP G+ K A+ A + GL G+PG G+ G VG
Sbjct: 716 QGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGL-QGMPGERGAAGIAGPKGDRGDVGEKG 774
Query: 571 -AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG------VGIPGGV 623
G PG G G+ G PG A A K PG G GA G G PG
Sbjct: 775 PEGAPGKDGGRGLTGPIGPPGP-AGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPA 833
Query: 624 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGI-----------P 672
AGP A A + + G G AG G G G PG G G+ P
Sbjct: 834 GFAGPPGADGQPGAKGEQGEAGQKGDAGAPG-PQGPSGAPGPQGPTGVTGPKGARGAQGP 892
Query: 673 PAAAAKAAKYGVAARPGFGLSPIFPG 698
P A G PG +P PG
Sbjct: 893 PGATGFPGAAGRVGPPGSNGNPGPPG 918
Score = 152 bits (383), Expect = 1e-36
Identities = 234/745 (31%), Positives = 261/745 (35%), Gaps = 118/745 (15%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPA 84
P G PG P G P G P G G GA GP G+ +P G G
Sbjct: 118 PKGPPG--PQG-PAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP----------- 163
Query: 85 VTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPG 144
PG P G + A AG G G LGV P P PG PG
Sbjct: 164 ---PGPPGPPGPPGLGGNFAAQMAG-GFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 219
Query: 145 KVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGP 203
G PG PG PGV P P G P PG G AG PG G G P
Sbjct: 220 PQGFQGNPGE------PGE--PGVSG-PMGPRGPPGPPGKPGDDGE-AGKPGKAGERGPP 269
Query: 204 QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAA 262
P G+P P LPG G G L G G G G++G P G GP
Sbjct: 270 GPQGARGFP-GTPGLPGVKGHRGYPG-LDGAKGEAGAPGVKGESGSPGENGSPGPMGPRG 327
Query: 263 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 322
+ AGAAG G G G PG + GG G P A A G
Sbjct: 328 LPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEG 387
Query: 323 AAAGL----VPGGPG-----FGPGVVGVPG----AGVPGV-GVPG----AGIPVVPGA-- 362
A PG PG PG G+PG AG PG+ G PG G P GA
Sbjct: 388 AQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATG 447
Query: 363 --------GIPGAA----------VPGVVSPEAAAKAAAKAAKYGAR--PGVGVGGI-PT 401
G PG A PG P+ A A + K GAR PG GVG I P
Sbjct: 448 PLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPG-GVGPIGPP 506
Query: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGT 461
GA G GF G G+ G G PG G G+ G G P A+ G
Sbjct: 507 GERGAPGNRGF-PGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGR 565
Query: 462 PAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVA---PGVGVAPGV 518
P A + K G PG PG G PGV PG A PG G+
Sbjct: 566 PGDAGPQ--GKVGPSG-APGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGL 622
Query: 519 GVAPGI-------GPGGVAAAAKSAAKVAAKAQLRAAAGLG-------AGIPGLGVGVGV 564
APG+ G G A A + + A G G PG G G
Sbjct: 623 PGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGD 682
Query: 565 PGLGVGAGVPGLGVG----AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 620
G+ AG PGL VG G PG PGA + + PG G GA G G P
Sbjct: 683 QGVPGEAGAPGL-VGPRGERGFPGERGSPGA-QGLQGPRGLPGTPGTDGPKGASGPAGPP 740
Query: 621 G--------GVVGAGPAAAAAAAKA-AAKAAQFGLVGAAGL-GGLGV-GGLGVPGVGGLG 669
G G+ G AA A K + G GA G GG G+ G +G PG G
Sbjct: 741 GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGAN 800
Query: 670 GI-----PPAAAAKAAKYGVAARPG 689
G PP A A G G
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERG 825
Score = 142 bits (357), Expect = 1e-33
Identities = 231/752 (30%), Positives = 268/752 (35%), Gaps = 132/752 (17%)
Query: 26 PGGV-PGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGA-GLGAGLGA 81
PGGV P PG G PG +PG G GP G P + P GLAG G G
Sbjct: 497 PGGVGPIGPPGERGAPGNRGFPGQD------GLAGPKGAPGERGPSGLAGPKGANGDPGR 550
Query: 82 FPAVTFPGAL-VPGGVADAAAAYKAAKAGA-GLGGVPGVGG-LGVSAAPSVPGAVVPQPG 138
PGA + G DA K +GA G G PG G G P V G P+ G
Sbjct: 551 PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPK-G 609
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPG-------ARFPGVGVLPGVPTGAGVKPKAPGVGGAF 191
A +PGK GLPG LPG A PG P P G + APG G F
Sbjct: 610 ANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG----PAGPAGERGEQGAPGPSG-F 664
Query: 192 AGIPGV-GPFG-GPQPG---VP--LGYP-IKAPK----LPGGYGLPYTTGK-----LPYG 234
G+PG GP G G +PG VP G P + P+ PG G P G LP
Sbjct: 665 QGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGT 724
Query: 235 YGPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGV 287
G G GA+G AG P G G + AA A + G G G G
Sbjct: 725 PGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGG 784
Query: 288 PGVPGAI--PGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 341
G+ G I PG G G VG P A +A A + G P G PG G
Sbjct: 785 RGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQ 844
Query: 342 PGA-------------GVPGV----GVPGAGIPV-------------VPGA-GIPGAA-- 368
PGA G PG G PG P PGA G PGAA
Sbjct: 845 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 904
Query: 369 -----VPGVVSPEAAAKAAAKAAKYGAR-----------PGV-GVGGIPTYG-------- 403
G P + K GAR PG+ G G P
Sbjct: 905 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGP 964
Query: 404 VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPA 463
GA G PG G+ G G+ G+PG G G G+PG P Q A A + G P
Sbjct: 965 SGAEGPPG-PQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDR---GPPG 1020
Query: 464 AAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
A PG +PG PG A GV G A G APG +P
Sbjct: 1021 PVGPPGLTGPAG---EPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSP- 1076
Query: 524 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGV 582
GP G + A+ + + GA GI G G G G GL G
Sbjct: 1077 -GPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGF 1135
Query: 583 PGFGAVPGAL-------AAAKAAKYG-AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAA 634
G +PG A+ A G PG +G G G GIPG + GP +
Sbjct: 1136 TGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGE 1195
Query: 635 AKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 666
A G G G G G+ G+G
Sbjct: 1196 TGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLG 1227
Score = 125 bits (314), Expect = 1e-28
Identities = 179/567 (31%), Positives = 203/567 (35%), Gaps = 75/567 (13%)
Query: 172 PGVPTGAGVKPKAPGVGGAFAGIPG-----VGPFGGPQPGVPLGY--PIKAPKLPGGYGL 224
P PT PG G G PG VGP G P P P G P G G
Sbjct: 87 PICPTDLATASGQPGPKGQ-KGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGA 145
Query: 225 PYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL----- 279
P G+ PG G G G P G+G AA A K G GV+
Sbjct: 146 PGPRGRDGEPGTPGN-PGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMG 204
Query: 280 -------PGVGGA-------GVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAA 324
PG GA G PG PG PG+ G G G P +A K G A
Sbjct: 205 PMGPRGPPGPAGAPGPQGFQGNPGEPGE-PGVSGPMGPRGPPGPPGKPGDDGEAGKPGKA 263
Query: 325 AGLVPGGP----GFGPGVVGVPGA----GVPGV-GVPG-AGIPVVPG-AGIPGA-AVPGV 372
P GP GF PG G+PG G PG+ G G AG P V G +G PG PG
Sbjct: 264 GERGPPGPQGARGF-PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGP 322
Query: 373 VSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG-----FGVGVGGIPGVAGVPG 427
+ P + GA G G P G G PG G G G PG G G
Sbjct: 323 MGPRGLPGERGRTGPAGAAGARGNDGQP----GPAGPPGPVGPAGGPGFPGAPGAKGEAG 378
Query: 428 VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPG 487
G G G G P + A GT AK +A A PG+ APG
Sbjct: 379 PTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAPG 432
Query: 488 VGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGV--AAAAKSAAKVAAKAQ 544
PG PG A G G PG+ G GP G A + A A +
Sbjct: 433 F---PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEG 489
Query: 545 LRAAAGLGAGIPGLGV--GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGA 602
R A G G+ +G G PG G GL G PG P LA K A
Sbjct: 490 KRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERG-PSGLAGPKGANGDP 548
Query: 603 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGV 662
PG G GA G G PG AGP + A + + G G G G G +G
Sbjct: 549 GRPGEPGLPGARGLTGRPG---DAGPQGKVGPSGAPGEDGRPGPPGPQGARG-QPGVMGF 604
Query: 663 PGVGGLGGIPPAAAAKAAKYGVAARPG 689
PG G G P KA + G+ PG
Sbjct: 605 PGPKGANGEP----GKAGEKGLPGAPG 627
Score = 110 bits (274), Expect = 6e-24
Identities = 149/461 (32%), Positives = 168/461 (36%), Gaps = 61/461 (13%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P P G GA G G V PG A GA G G+ P P G AG
Sbjct: 790 PIGPPGPAGA--NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGP--------- 838
Query: 83 PAVTFPGAL-VPGGVADAAAAYKAAKAGA----GLGGVPGVGG-LGVSAAPSVPGAVVPQ 136
PGA PG + A + AGA G G PG G GV+ GA P
Sbjct: 839 -----PGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGP- 892
Query: 137 PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG 196
PGA PG VG PG PG PG G P GA PG AG PG
Sbjct: 893 PGATGFPGAAGRVGPPGSNGNPGPPGP--PGPSGKDG-PKGARGDSGPPGR----AGEPG 945
Query: 197 V-GPFGGP----QPGVPLGYPIKAPKLPGGY-------GLPYTTGKLPYGYGPGGVAGAA 244
+ GP G P +PG + P P G GLP G+ + G G +G
Sbjct: 946 LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFP-GLPGPSGEP 1004
Query: 245 GKAGYPTGTG-------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
GK G P +G VGP A + + GA G G AGV G G +
Sbjct: 1005 GKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAV 1064
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIP 357
G G P + A K G A P GP G G+ G P AG P
Sbjct: 1065 GAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEP 1124
Query: 358 VVPG----AGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG- 411
G G G +PG P A+ A G R G G P+ GA G PG
Sbjct: 1125 GERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVG-PSGKDGANGIPGP 1183
Query: 412 FGV----GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQA 448
G G G G AG PG G PG G PG GI A A
Sbjct: 1184 IGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFA 1224
Score = 82.4 bits (202), Expect = 1e-15
Identities = 109/356 (30%), Positives = 128/356 (35%), Gaps = 47/356 (13%)
Query: 363 GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGV 422
G PG + +V P+ A + G R G G G PG G G PG
Sbjct: 107 GEPGD-IKDIVGPKGPPGPQGPAGEQGPRGDRG-------DKGEKGAPG-PRGRDGEPGT 157
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 482
G PG G PG G PG+G + AQ A A AQ G++ G
Sbjct: 158 PGNPGPPGPPGPPGPPGLGGNFAAQ---------------MAGGFDEKAGGAQLGVMQGP 202
Query: 483 GVAPGVGVAPGVGVAPGVGLAPGVGVAPG-VGVAPGVGVAPGIGPGGVAAAAKSAAKVAA 541
G PG APG G PG GV+ +G GP G A K
Sbjct: 203 MGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGK 262
Query: 542 KAQLRAAAGLGA-------GIPGLGVGVGVPGLGVG---AGVPGLGVGAGVPGFGAVPG- 590
+ GA G+PG+ G PGL AG PG+ +G PG PG
Sbjct: 263 AGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGP 322
Query: 591 ----ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAG----PAAAAAAAKAAAKAA 642
L + A G G G G G PG V AG P A A +A A
Sbjct: 323 MGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGA 382
Query: 643 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
+ G GA G G G G PG G G P AK G A PG +P FPG
Sbjct: 383 R-GPEGAQGPRG-EPGTPGSPGPAGASGNPGTDGIPGAK-GSAGAPGIAGAPGFPG 435
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 162 bits (410), Expect = 1e-39
Identities = 231/746 (30%), Positives = 265/746 (35%), Gaps = 108/746 (14%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAG----AGLGAG 78
P P G PG P G G PG + G GP G P KP G AG AG
Sbjct: 142 PPGPAGAPG--PQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGP 199
Query: 79 LGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAVVPQP 137
G A FPG GV G G PG+ G G + AP V G P
Sbjct: 200 PGPQGARGFPGTPGLPGVK-------------GHRGYPGLDGAKGEAGAPGVKGES-GSP 245
Query: 138 GAGVKPGKVPGVGLPG----VYPGGVLPGARF----PGVGVLPGV--PTGAGVKPKAPGV 187
G PG + GLPG P G GAR PG PG P G P APG
Sbjct: 246 GENGSPGPMGPRGLPGERGRTGPAGAA-GARGNDGQPGPAGPPGPVGPAGGPGFPGAPGA 304
Query: 188 GGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKA 247
G GP G P G P +P G G P T G +P G G G AG
Sbjct: 305 KGEAGPTGARGPEGAQGPRGEPGTP-GSPGPAGASGNPGTDG-IPGAKGSAGAPGIAGAP 362
Query: 248 GYPTGTGV-GPQAA---------------AAAAAKAAAKFGAGAAGVLPGVGGAGVPGVP 291
G+P G GPQ A A + K G AG G AG G
Sbjct: 363 GFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKR 422
Query: 292 GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV- 349
GA GG+ +G P A + G A GP PG G G AG G
Sbjct: 423 GARGEPGGVGPIGPPGERGAPGNRGFPGQDGLA------GPKGAPGERGPSGLAGPKGAN 476
Query: 350 GVPGA-GIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407
G PG G P +PGA G+ G PG P+ + + G RPG P GA
Sbjct: 477 GDPGRPGEPGLPGARGLTGR--PGDAGPQGKVGPSGAPGEDG-RPG------PPGPQGAR 527
Query: 408 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAA 467
G PG +G G G G PG G G+ G PG+ P A G
Sbjct: 528 GQPGV-MGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGE 586
Query: 468 KAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI--- 524
+ A + F +PG PG G PG PG APG+ G PG +PG
Sbjct: 587 QGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGL 646
Query: 525 -GPGGVAA-----AAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-----GVG--- 570
GP G+ K A+ A + GL G+PG G+ G VG
Sbjct: 647 QGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGL-QGMPGERGAAGIAGPKGDRGDVGEKG 705
Query: 571 -AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG------VGIPGGV 623
G PG G G+ G PG A A K PG G GA G G PG
Sbjct: 706 PEGAPGKDGGRGLTGPIGPPGP-AGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPA 764
Query: 624 VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGI-----------P 672
AGP A A + + G G AG G G G PG G G+ P
Sbjct: 765 GFAGPPGADGQPGAKGEQGEAGQKGDAGAPG-PQGPSGAPGPQGPTGVTGPKGARGAQGP 823
Query: 673 PAAAAKAAKYGVAARPGFGLSPIFPG 698
P A G PG +P PG
Sbjct: 824 PGATGFPGAAGRVGPPGSNGNPGPPG 849
Score = 152 bits (383), Expect = 1e-36
Identities = 234/745 (31%), Positives = 261/745 (35%), Gaps = 118/745 (15%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPA 84
P G PG P G P G P G G GA GP G+ +P G G
Sbjct: 49 PKGPPG--PQG-PAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP----------- 94
Query: 85 VTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPG 144
PG P G + A AG G G LGV P P PG PG
Sbjct: 95 ---PGPPGPPGPPGLGGNFAAQMAG-GFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 150
Query: 145 KVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGP 203
G PG PG PGV P P G P PG G AG PG G G P
Sbjct: 151 PQGFQGNPGE------PGE--PGVSG-PMGPRGPPGPPGKPGDDGE-AGKPGKAGERGPP 200
Query: 204 QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAA 262
P G+P P LPG G G L G G G G++G P G GP
Sbjct: 201 GPQGARGFP-GTPGLPGVKGHRGYPG-LDGAKGEAGAPGVKGESGSPGENGSPGPMGPRG 258
Query: 263 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 322
+ AGAAG G G G PG + GG G P A A G
Sbjct: 259 LPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEG 318
Query: 323 AAAGL----VPGGPG-----FGPGVVGVPG----AGVPGV-GVPG----AGIPVVPGA-- 362
A PG PG PG G+PG AG PG+ G PG G P GA
Sbjct: 319 AQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATG 378
Query: 363 --------GIPGAA----------VPGVVSPEAAAKAAAKAAKYGAR--PGVGVGGI-PT 401
G PG A PG P+ A A + K GAR PG GVG I P
Sbjct: 379 PLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPG-GVGPIGPP 437
Query: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGT 461
GA G GF G G+ G G PG G G+ G G P A+ G
Sbjct: 438 GERGAPGNRGF-PGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGR 496
Query: 462 PAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVA---PGVGVAPGV 518
P A + K G PG PG G PGV PG A PG G+
Sbjct: 497 PGDAGPQ--GKVGPSG-APGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGL 553
Query: 519 GVAPGI-------GPGGVAAAAKSAAKVAAKAQLRAAAGLG-------AGIPGLGVGVGV 564
APG+ G G A A + + A G G PG G G
Sbjct: 554 PGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGD 613
Query: 565 PGLGVGAGVPGLGVG----AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 620
G+ AG PGL VG G PG PGA + + PG G GA G G P
Sbjct: 614 QGVPGEAGAPGL-VGPRGERGFPGERGSPGA-QGLQGPRGLPGTPGTDGPKGASGPAGPP 671
Query: 621 G--------GVVGAGPAAAAAAAKA-AAKAAQFGLVGAAGL-GGLGV-GGLGVPGVGGLG 669
G G+ G AA A K + G GA G GG G+ G +G PG G
Sbjct: 672 GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGAN 731
Query: 670 GI-----PPAAAAKAAKYGVAARPG 689
G PP A A G G
Sbjct: 732 GEKGEVGPPGPAGSAGARGAPGERG 756
Score = 142 bits (357), Expect = 1e-33
Identities = 231/752 (30%), Positives = 268/752 (35%), Gaps = 132/752 (17%)
Query: 26 PGGV-PGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGA-GLGAGLGA 81
PGGV P PG G PG +PG G GP G P + P GLAG G G
Sbjct: 428 PGGVGPIGPPGERGAPGNRGFPGQD------GLAGPKGAPGERGPSGLAGPKGANGDPGR 481
Query: 82 FPAVTFPGAL-VPGGVADAAAAYKAAKAGA-GLGGVPGVGG-LGVSAAPSVPGAVVPQPG 138
PGA + G DA K +GA G G PG G G P V G P+ G
Sbjct: 482 PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPK-G 540
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPG-------ARFPGVGVLPGVPTGAGVKPKAPGVGGAF 191
A +PGK GLPG LPG A PG P P G + APG G F
Sbjct: 541 ANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG----PAGPAGERGEQGAPGPSG-F 595
Query: 192 AGIPGV-GPFG-GPQPG---VP--LGYP-IKAPK----LPGGYGLPYTTGK-----LPYG 234
G+PG GP G G +PG VP G P + P+ PG G P G LP
Sbjct: 596 QGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGT 655
Query: 235 YGPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGV 287
G G GA+G AG P G G + AA A + G G G G
Sbjct: 656 PGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGG 715
Query: 288 PGVPGAI--PGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 341
G+ G I PG G G VG P A +A A + G P G PG G
Sbjct: 716 RGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQ 775
Query: 342 PGA-------------GVPGV----GVPGAGIPV-------------VPGA-GIPGAA-- 368
PGA G PG G PG P PGA G PGAA
Sbjct: 776 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 835
Query: 369 -----VPGVVSPEAAAKAAAKAAKYGAR-----------PGV-GVGGIPTYG-------- 403
G P + K GAR PG+ G G P
Sbjct: 836 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGP 895
Query: 404 VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPA 463
GA G PG G+ G G+ G+PG G G G+PG P Q A A + G P
Sbjct: 896 SGAEGPPG-PQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDR---GPPG 951
Query: 464 AAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
A PG +PG PG A GV G A G APG +P
Sbjct: 952 PVGPPGLTGPAG---EPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSP- 1007
Query: 524 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGV 582
GP G + A+ + + GA GI G G G G GL G
Sbjct: 1008 -GPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGF 1066
Query: 583 PGFGAVPGAL-------AAAKAAKYG-AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAA 634
G +PG A+ A G PG +G G G GIPG + GP +
Sbjct: 1067 TGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGE 1126
Query: 635 AKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 666
A G G G G G+ G+G
Sbjct: 1127 TGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLG 1158
Score = 123 bits (309), Expect = 5e-28
Identities = 177/560 (31%), Positives = 202/560 (36%), Gaps = 75/560 (13%)
Query: 179 GVKPKAPGVGGAFAGIPG-----VGPFGGPQPGVPLGY--PIKAPKLPGGYGLPYTTGKL 231
G + PG G G PG VGP G P P P G P G G P G+
Sbjct: 25 GQDVRQPGPKGQ-KGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD 83
Query: 232 PYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL------------ 279
PG G G G P G+G AA A K G GV+
Sbjct: 84 GEPGTPGN-PGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGP 142
Query: 280 PGVGGA-------GVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGG 331
PG GA G PG PG PG+ G G G P +A K G A P G
Sbjct: 143 PGPAGAPGPQGFQGNPGEPGE-PGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPG 201
Query: 332 P----GFGPGVVGVPGA----GVPGV-GVPG-AGIPVVPG-AGIPGA-AVPGVVSPEAAA 379
P GF PG G+PG G PG+ G G AG P V G +G PG PG + P
Sbjct: 202 PQGARGF-PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLP 260
Query: 380 KAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG-----FGVGVGGIPGVAGVPGVGGVPGV 434
+ GA G G P G G PG G G G PG G G G G
Sbjct: 261 GERGRTGPAGAAGARGNDGQP----GPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGP 316
Query: 435 GGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGV 494
G G P + A GT AK +A A PG+ APG PG
Sbjct: 317 EGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAPGF---PGP 367
Query: 495 GVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGV--AAAAKSAAKVAAKAQLRAAAGL 551
PG A G G PG+ G GP G A + A A + R A G
Sbjct: 368 RGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGE 427
Query: 552 GAGIPGLGV--GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 609
G+ +G G PG G GL G PG P LA K A PG G
Sbjct: 428 PGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERG-PSGLAGPKGANGDPGRPGEPG 486
Query: 610 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLG 669
GA G G PG AGP + A + + G G G G G +G PG G
Sbjct: 487 LPGARGLTGRPG---DAGPQGKVGPSGAPGEDGRPGPPGPQGARG-QPGVMGFPGPKGAN 542
Query: 670 GIPPAAAAKAAKYGVAARPG 689
G P KA + G+ PG
Sbjct: 543 GEP----GKAGEKGLPGAPG 558
Score = 110 bits (274), Expect = 6e-24
Identities = 149/461 (32%), Positives = 168/461 (36%), Gaps = 61/461 (13%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P P G GA G G V PG A GA G G+ P P G AG
Sbjct: 721 PIGPPGPAGA--NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGP--------- 769
Query: 83 PAVTFPGAL-VPGGVADAAAAYKAAKAGA----GLGGVPGVGG-LGVSAAPSVPGAVVPQ 136
PGA PG + A + AGA G G PG G GV+ GA P
Sbjct: 770 -----PGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGP- 823
Query: 137 PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG 196
PGA PG VG PG PG PG G P GA PG AG PG
Sbjct: 824 PGATGFPGAAGRVGPPGSNGNPGPPGP--PGPSGKDG-PKGARGDSGPPGR----AGEPG 876
Query: 197 V-GPFGGP----QPGVPLGYPIKAPKLPGGY-------GLPYTTGKLPYGYGPGGVAGAA 244
+ GP G P +PG + P P G GLP G+ + G G +G
Sbjct: 877 LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFP-GLPGPSGEP 935
Query: 245 GKAGYPTGTG-------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
GK G P +G VGP A + + GA G G AGV G G +
Sbjct: 936 GKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAV 995
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIP 357
G G P + A K G A P GP G G+ G P AG P
Sbjct: 996 GAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEP 1055
Query: 358 VVPG----AGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG- 411
G G G +PG P A+ A G R G G P+ GA G PG
Sbjct: 1056 GERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVG-PSGKDGANGIPGP 1114
Query: 412 FGV----GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQA 448
G G G G AG PG G PG G PG GI A A
Sbjct: 1115 IGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFA 1155
Score = 82.4 bits (202), Expect = 1e-15
Identities = 109/356 (30%), Positives = 128/356 (35%), Gaps = 47/356 (13%)
Query: 363 GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGV 422
G PG + +V P+ A + G R G G G PG G G PG
Sbjct: 38 GEPGD-IKDIVGPKGPPGPQGPAGEQGPRGDRG-------DKGEKGAPG-PRGRDGEPGT 88
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 482
G PG G PG G PG+G + AQ A A AQ G++ G
Sbjct: 89 PGNPGPPGPPGPPGPPGLGGNFAAQ---------------MAGGFDEKAGGAQLGVMQGP 133
Query: 483 GVAPGVGVAPGVGVAPGVGLAPGVGVAPG-VGVAPGVGVAPGIGPGGVAAAAKSAAKVAA 541
G PG APG G PG GV+ +G GP G A K
Sbjct: 134 MGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGK 193
Query: 542 KAQLRAAAGLGA-------GIPGLGVGVGVPGLGVG---AGVPGLGVGAGVPGFGAVPG- 590
+ GA G+PG+ G PGL AG PG+ +G PG PG
Sbjct: 194 AGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGP 253
Query: 591 ----ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAG----PAAAAAAAKAAAKAA 642
L + A G G G G G PG V AG P A A +A A
Sbjct: 254 MGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGA 313
Query: 643 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
+ G GA G G G G PG G G P AK G A PG +P FPG
Sbjct: 314 R-GPEGAQGPRG-EPGTPGSPGPAGASGNPGTDGIPGAK-GSAGAPGIAGAPGFPG 366
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 160 bits (405), Expect = 4e-39
Identities = 231/741 (31%), Positives = 289/741 (39%), Gaps = 129/741 (17%)
Query: 23 PSRPG--GVPGAIPG------GVPGGV----FYPGAGLGALGGGALGPGGKPLKPVPGGL 70
P PG G PG G G+PG + F G+ AL GG GP GK P P GL
Sbjct: 380 PGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPDGKRGPPGPPGL 439
Query: 71 AGA--------GL--GAGLGAFPAVT-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVG 119
G GL G FP + PGA P G A + + + G+PG+
Sbjct: 440 PGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGDEAIKGLPGLP 499
Query: 120 G----LGVSAAPSVPGAVVPQPGAGVKPG-----KVPG-VGLPGVYPGGVLPGARF---P 166
G G++ P G PG PG VPG +G PG P G +R
Sbjct: 500 GPKGFAGINGEPGRKGDR-GDPGQHGLPGFPGLKGVPGNIGAPG--PKGAKGDSRTITTK 556
Query: 167 GVGVLPGVPTGAGVKPK--APGVGG--AFAGIPGV------GPFGGP-QPGVPLGYPIKA 215
G PGVP G+K +PG G F G+PG GP G P PG+P
Sbjct: 557 GERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPG 616
Query: 216 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGA 275
P G GLP G+ + G G+ G G G P G Q K A G
Sbjct: 617 EMGPPGLGLPGLKGQRGFP-GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVG-GDRQ 674
Query: 276 AGVLPG-VGGA-GVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGL-VPGG 331
+ PG +GG G+PG+PG PG G G+ G P A A G A PG
Sbjct: 675 EAIQPGCIGGPKGLPGLPGP-PGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGP 733
Query: 332 PGF-GP----GVVGVPGA-GVPG-VGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAA 383
PGF GP G VG+PG G PG +G+PG P PG G+PG + P A
Sbjct: 734 PGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGP--PGERGLPGEVLGAQPGPRGDA---- 787
Query: 384 KAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
G G+ G+P G G PGF G G+PG+ G+ G G+PG G PG+
Sbjct: 788 -----GVPGQPGLKGLP----GDRGPPGFR-GSQGMPGMPGLKGQPGLPGPSGQPGLYGP 837
Query: 444 PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLA 503
P A + +G P +PG PG PG APG
Sbjct: 838 PGLHGFPGAPGQEGPLGLPG---------------IPGREGLPGDRGDPGDTGAPGPVGM 882
Query: 504 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 563
G+ G G PG PG + G+ G PGL G
Sbjct: 883 KGLSGDRGDAGFTGEQGHPG-SPG-----------------FKGIDGM-PGTPGLKGDRG 923
Query: 564 VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG-- 621
PG+ G+PGL G PGF PG+ +A +G +PG+ G G G G G
Sbjct: 924 SPGMDGFQGMPGL---KGRPGF---PGS--KGEAGFFG--IPGLKGLAGEPGFKGSRGDP 973
Query: 622 GVVGAGPAAAAAAAKAAAKAAQFGLVGAAG-LGGLGVGGL-GVPGVGGLGGIPPAAAAKA 679
G G P + G +G G LG G+ G+ G+PG+ G+ G+P
Sbjct: 974 GPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIK 1033
Query: 680 AKYGVAARPGFGLSPIFPGGA 700
G PG P FPG A
Sbjct: 1034 GVKGDIGVPGIPGLPGFPGVA 1054
Score = 149 bits (375), Expect = 1e-35
Identities = 238/846 (28%), Positives = 297/846 (35%), Gaps = 233/846 (27%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGA-------GL 75
P PG V P G PG V G +GP G P +P P G G GL
Sbjct: 186 PGEPGLVGFQGPPGRPGHV------------GQMGPVGAPGRPGPPGPPGPKGQQGNRGL 233
Query: 76 G-------------AGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLG 122
G G P+ T + P GV YK K G G+ G+ G
Sbjct: 234 GFYGVKGEKGDVGQPGPNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKG 293
Query: 123 VSAAPSVPGAVVPQPG-AGVK--PGKVPGVGLPGVY--------------PG-------- 157
PG + PG +G K PG+ GL G PG
Sbjct: 294 EEGIMGFPG-LRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYS 352
Query: 158 ---GVLPGAR----FPGVGVLP---GVPTGAGVKPKAPGV----GGAFAGIPG-VGPFGG 202
+ GAR FPG P G P G+ P PG+ G G+PG +GP G
Sbjct: 353 PHPSLAKGARGDPGFPGAQGEPGSQGEPGDPGL-PGPPGLSIGDGDQRRGLPGEMGPKGF 411
Query: 203 -PQPGVPLGY-----PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV- 255
PG+P Y P PG GLP G + +G G G AG G P G
Sbjct: 412 IGDPGIPALYGGPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGAR 471
Query: 256 GPQAAAAAAAKAAAKFGAGAAGVLPGVGG----AGVPGVPG--------------AIPGI 297
GP+ A + G A LPG+ G AG+ G PG PG+
Sbjct: 472 GPKGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKGDRGDPGQHGLPGFPGL 531
Query: 298 GGIAG-VGTPAAAAAAAAAAKAAKYGAAA--------------------GL-----VPGG 331
G+ G +G P A + G GL +PG
Sbjct: 532 KGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGP 591
Query: 332 PGFG-------PGVVGVPGA-------GVPGVGVPG----------AGIPVVPG-AGIPG 366
PG G PG G+PG G PG+G+PG AG+P PG G PG
Sbjct: 592 PGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPG 651
Query: 367 -AAVPGVVSPEAAAKAAAKAAKYGA-RPGV-----GVGGI-----PTYGVGAGGFPGFGV 414
A PG + + K A + A +PG G+ G+ PT G G PGF
Sbjct: 652 PAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIGGPKGLPGLPGPPGPTGAKGLRGIPGF-A 710
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAA 474
G G PG G+PG G G G PG I P + +K VG P +
Sbjct: 711 GADGGPGPRGLPGDAGREGFPGPPGF-IGP--------RGSKGAVGLPGPDGS------- 754
Query: 475 QFGLVPGVGVAPGVGVAPGVGVAPG--VGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAA 531
PG PG PG PG +G PG GV PG+ PG GP G
Sbjct: 755 -----PGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPG--- 806
Query: 532 AAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGA 591
R + G+ G+PGL G PGL +G PGL G+ GF PG
Sbjct: 807 -------------FRGSQGM-PGMPGL---KGQPGLPGPSGQPGLYGPPGLHGFPGAPG- 848
Query: 592 LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 651
+ +PG+ G G G G PG GP + A G G G
Sbjct: 849 ------QEGPLGLPGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGHPG 902
Query: 652 LGGL-GVGGL----------GVPGVGGLGGIP--------PAAAAKAAKYGVAARPGFGL 692
G G+ G+ G PG+ G G+P P + +A +G+ G
Sbjct: 903 SPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAG 962
Query: 693 SPIFPG 698
P F G
Sbjct: 963 EPGFKG 968
Score = 137 bits (345), Expect = 3e-32
Identities = 224/781 (28%), Positives = 278/781 (35%), Gaps = 159/781 (20%)
Query: 26 PGGVPGAI----PGGVPGGVFYPGAGLGALGG--GALGPGGKP-LKPVPGGLAGAGLGAG 78
P G PG I P G PG PG LGA G G G G+P LK +PG G
Sbjct: 751 PDGSPGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGS 810
Query: 79 LGAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGGL-GVSAAPSVPGAV 133
G PG +PG + + G GL G PG G G P +PG
Sbjct: 811 QG------MPG--MPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGRE 862
Query: 134 VPQPGAGVKPGKV--PG-VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK--PKAPGVG 188
PG PG PG VG+ G+ G A F G PG P G+ P PG+
Sbjct: 863 -GLPGDRGDPGDTGAPGPVGMKGL--SGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLK 919
Query: 189 GAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G G PG+ F G P L G G P + G+ + +G G+ G AG+ G
Sbjct: 920 GD-RGSPGMDGFQG------------MPGLKGRPGFPGSKGEAGF-FGIPGLKGLAGEPG 965
Query: 249 YPTGTG----VGPQAAAAAAAK-----------AAAKFGAGAAGV--LPGVGG-AGVPGV 290
+ G GP K K GA G+ +PG+ G +G+PG+
Sbjct: 966 FKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGL 1025
Query: 291 PG---------------AIPGIGGIAGVGTPAAAAA----------AAAAAKAAKYGAAA 325
PG IPG+ G GV P A +A YG
Sbjct: 1026 PGRPGHIKGVKGDIGVPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIG 1085
Query: 326 GL-----------VPGGPGFGP--GVVGVPGA-------GVPG-VGVPG-AGIPVVPGA- 362
+PG PG G G+PG G G +G PG G+ V G
Sbjct: 1086 ATGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPP 1145
Query: 363 GIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPG 421
G+ G PG+ P + + + G G G G P GA G PGF G+ GI G
Sbjct: 1146 GLKGQTGFPGLTGPPGSQ---GELGRIGLPGGKGDDGWP----GAPGLPGFP-GLRGIRG 1197
Query: 422 VAGVPGVGGVPG-----VGGVPGVGISP-EAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQ 475
+ G+PG G PG + G PG P E A VG P + A
Sbjct: 1198 LHGLPGTKGFPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERG 1257
Query: 476 FGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKS 535
PG+ PG+ + APG APG+ G PG + + PG
Sbjct: 1258 PPGSPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAAL-PGSKGDTGNP 1316
Query: 536 AAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGL--------GVG-------A 580
A + A G PG+ G+PG G G VG
Sbjct: 1317 GAPGTPGTKGWAGDSGPQGRPGV---FGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPK 1373
Query: 581 GVPGFGAVPGALAAAKAAKYG---AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKA 637
G PGF PG + A A A PG +G G G G PG + GP A
Sbjct: 1374 GDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGA 1433
Query: 638 AAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFP 697
KA G G GG+ VPG G G P + G RPG SP P
Sbjct: 1434 PGKA------GPQGRGGVS----AVPGFRGDEG-PIGHQGPIGQEGAPGRPG---SPGLP 1479
Query: 698 G 698
G
Sbjct: 1480 G 1480
Score = 113 bits (283), Expect = 5e-25
Identities = 185/652 (28%), Positives = 226/652 (34%), Gaps = 81/652 (12%)
Query: 92 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGL 151
VP G D + + G G VG G + P + G PG + G G
Sbjct: 40 VPCGGRDCSGGCQCYPEKGGRGQPGPVGPQGYNGPPGLQGF----PGLQGRKGDKGERGA 95
Query: 152 PGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGV 207
PGV GAR FPG +PG P G + + PG G GP G P
Sbjct: 96 PGVTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGR-PGYDGCNGTQGDSGPQGPPGSEG 154
Query: 208 PLGYPIKAPKLPGGY-GLPYTTGKLP---YGYGPG--GVAGAAGKAGYPTGTG-VGPQAA 260
G P P+ P G G PY K Y PG G+ G G G P G +GP A
Sbjct: 155 FTGPP--GPQGPKGQKGEPYALPKEERDRYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGA 212
Query: 261 AAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGVGTPAAAAAAAAAAKA 318
G G G+G GV G G + PG GI A
Sbjct: 213 PGRPGPPGPPGPKGQQGNR-GLGFYGVKGEKGDVGQPGPNGIPSDTLHPIIAPTGVTFHP 271
Query: 319 AKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV-GVPGA-GIPVVPGA-GIPGA----AVPG 371
+Y G PG+ G+ G G+ G PG G P + G G PG + G
Sbjct: 272 DQYKGEKGSEGE-----PGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDG 326
Query: 372 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGV 431
P+ +A G P+ GA G PGF PG G PG G
Sbjct: 327 YQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARGDPGF-------PGAQGEPGSQGE 379
Query: 432 PGVGGVPG-----VGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAP 486
PG G+PG +G + + K +G P A +G PG
Sbjct: 380 PGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPAL--------YGGPPGPDGKR 431
Query: 487 GVGVAPGVGVAPGV-GLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQ 544
G PG+ PG G G+ A G PG+ +PG GP G A
Sbjct: 432 GPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGDEA 491
Query: 545 LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA--AKAAKYGA 602
++ GL G G G PG G PG G PG VPG + A K AK +
Sbjct: 492 IKGLPGL-PGPKGFAGINGEPGRKGDRGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDS 550
Query: 603 AV---------PGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKAAAKAAQFGLVG 648
PGV G G G G PG G G G+ G
Sbjct: 551 RTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPG 610
Query: 649 AAGL-GGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGG 699
G G +G GLG+PG+ G G P A G+ PGF L P P G
Sbjct: 611 TKGTPGEMGPPGLGLPGLKGQRGFPGDA-------GLPGPPGF-LGPPGPAG 654
Score = 106 bits (264), Expect = 9e-23
Identities = 154/492 (31%), Positives = 190/492 (38%), Gaps = 101/492 (20%)
Query: 23 PSRPGGVPGA-----IPGGVPGGVFYPG-AGLGALGG--GALGPGGKPLKPVPGGLAGAG 74
P RPG + G +PG +PG +PG AG + G G +G G P GL G
Sbjct: 1026 PGRPGHIKGVKGDIGVPG-IPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGE- 1083
Query: 75 LGAGLGAF----PAVTFPGALVPG--------GVADAAAAY--KAAKAGAGLGGVPGVGG 120
+GA G F + PG PG G+ + K + G G+ GV G
Sbjct: 1084 IGA-TGDFGDIGDTINLPGR--PGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTG 1140
Query: 121 L----GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPT 176
+ G+ PG P PG+ G++ +GLPG PGA PG LPG P
Sbjct: 1141 VQGPPGLKGQTGFPGLTGP-PGS---QGELGRIGLPGGKGDDGWPGA--PG---LPGFPG 1191
Query: 177 GAGVKPK--APGVGGAFAGIPGVGPFGGPQ-PGVP--LGYPIKAPKLPGGYGLPYTTGK- 230
G++ PG G F G PG G P PG P G P +A LPG G+P G
Sbjct: 1192 LRGIRGLHGLPGTKG-FPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQ 1250
Query: 231 -LPYGYGPGG---------------VAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAK 270
P GP G ++GA G G P G+ GP +AA +K
Sbjct: 1251 GAPGERGPPGSPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSK 1310
Query: 271 FGAGAAGV--LPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLV 328
G G PG G P PG+ G+ G P GA
Sbjct: 1311 GDTGNPGAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMG--NTGPTGAVGDRG 1368
Query: 329 PGGPGFGPGVVGVPGAGVPGVGVPG-AGIP----VVPGA-------GIPGAAVPGVVSPE 376
P GP PG G PG VG PG AGIP V PG G PGA PG + P+
Sbjct: 1369 PKGPKGDPGFPGAPGT----VGAPGIAGIPQKIAVQPGTVGPQGRRGPPGA--PGEMGPQ 1422
Query: 377 AAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG-----VGVGGIPGVAGVPGVGGV 431
+ G R G G G G PGF +G G G G PG G
Sbjct: 1423 GPP------GEPGFRGAPGKAGPQGRG-GVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGS 1475
Query: 432 PGVGGVPGVGIS 443
PG+ G+PG +S
Sbjct: 1476 PGLPGMPGRSVS 1487
Score = 62.4 bits (150), Expect = 1e-09
Identities = 95/308 (30%), Positives = 110/308 (35%), Gaps = 58/308 (18%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLG 80
P PG PG G PG PG L G PG K + PG G GL
Sbjct: 1208 PGSPGSDIHGDPGFPGPPGERGDPGEA-NTLPGPVGVPGQKGDQGAPGERGPPG-SPGLQ 1265
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAVVPQPGA 139
FP +T P + + G D G PG+ GL G P PG+ PG+
Sbjct: 1266 GFPGIT-PPSNISGAPGDK--------------GAPGIFGLKGYRGPPGPPGSAA-LPGS 1309
Query: 140 GVKPGKVPGVGLPGV--YPGGVLPGARFPGVGVLPGV--------------PTGA--GVK 181
G G PG + G P R PGV LPG PTGA
Sbjct: 1310 KGDTGNPGAPGTPGTKGWAGDSGPQGR-PGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRG 1368
Query: 182 PKAPGVGGAFAGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
PK P F G PG VG PG+ G P K PG G G P G G
Sbjct: 1369 PKGPKGDPGFPGAPGTVGA-----PGIA-GIPQKIAVQPGTVGPQGRRGP-PGAPGEMGP 1421
Query: 241 AGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGV--------LPG-VGGAGVPGV 290
G G+ G+ G GPQ +A + G G PG G G+PG+
Sbjct: 1422 QGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGM 1481
Query: 291 PGAIPGIG 298
PG IG
Sbjct: 1482 PGRSVSIG 1489
Score = 45.4 bits (106), Expect = 2e-04
Identities = 116/443 (26%), Positives = 132/443 (29%), Gaps = 107/443 (24%)
Query: 344 AGVPGVGVPGAG---------IPVVPGAGIPGAAVP----GVVSPEAAAKAAAKAAKYGA 390
AGV VP G P G G PG P G + + G
Sbjct: 33 AGVKKFDVPCGGRDCSGGCQCYPEKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGE 92
Query: 391 RPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV-------GIS 443
R GV G P VGA G GF PG G+PG G G G PG G S
Sbjct: 93 RGAPGVTG-PKGDVGARGVSGF-------PGADGIPGHPGQGGPRGRPGYDGCNGTQGDS 144
Query: 444 --------------PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLV-----PG--- 481
P Q K Y + P + + + GLV PG
Sbjct: 145 GPQGPPGSEGFTGPPGPQGPKGQKGEPYAL--PKEERDRYRGEPGEPGLVGFQGPPGRPG 202
Query: 482 -VGVAPGVGVAPGVGVAPG------------------VGLAPGVGVAPGVGVAPGVGVAP 522
VG VG APG PG G VG PG P + P
Sbjct: 203 HVGQMGPVG-APGRPGPPGPPGPKGQQGNRGLGFYGVKGEKGDVG-QPGPNGIPSDTLHP 260
Query: 523 GIGPGGV--------------------AAAAKSAAKVAAKAQLRAAAGLGA--GIPGLGV 560
I P GV + K + LR GL G PG
Sbjct: 261 IIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKG 320
Query: 561 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 620
G+ G G G AG PG +P AK PG G G G G P
Sbjct: 321 SRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARGDPGFPGAQGEPGSQGEP 380
Query: 621 GGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAA 680
G GP + + GL G G G +G PG+ L G PP K
Sbjct: 381 GDPGLPGPPGLSIGDGDQRR----GLPGEMGPKGF----IGDPGIPALYGGPPGPDGKRG 432
Query: 681 KYGVAARPGFGLSPIFPGGACLG 703
G PG P P G G
Sbjct: 433 PPGPPGLPG----PPGPDGFLFG 451
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 153 bits (387), Expect = 5e-37
Identities = 234/756 (30%), Positives = 266/756 (35%), Gaps = 123/756 (16%)
Query: 28 GVPGAI-PGGVPGGVFYPG-AGLGALGG--GALGPGGK--------PLKPVPG-GLAGA- 73
G PG + P G+PG +PG G+ G GA GP G P PV GL GA
Sbjct: 363 GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAI 422
Query: 74 GLGAGLGAFPAVTFPGALVPGGVADAAAA-----YKAAKAGAGLGGVPGVGGLGVSAAPS 128
G GA PG P G A + + G G PGV G A P
Sbjct: 423 GTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPK 482
Query: 129 -------VPGAVVPQPGAGVK-PGKVPG-VGLPGVYPGGVLPGAR-FPGVGVLPGVPTGA 178
+ G + P G + P PG VG PG PG R FPG LPG P GA
Sbjct: 483 GEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPG-PKGA 541
Query: 179 ----------GVK--------PKAPGVGGA--FAGIPGV-------GPFGGP----QPGV 207
G K P PG+ GA G PGV GP G P +PG
Sbjct: 542 QGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGP 601
Query: 208 PLGYPIKAPKLPGGYGLPYTTGKL--PYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAAAA 264
P I+ PG GLP G P G G AG G+ G P G VGP
Sbjct: 602 PGSIGIRGQ--PGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPP 659
Query: 265 AKAAAKFGAGAAGVL-----------PGVGGA----GVPGVPGAIPGIGGIAGVGTPAAA 309
A + G G PG GG GVPG PGA+ +G G P
Sbjct: 660 GLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGER 719
Query: 310 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG-AGIPVVPG----- 361
+ G A G P GP PG G PG G PG+ G+PG GI PG
Sbjct: 720 GEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDR 779
Query: 362 -----------AGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVG-VGGIPTYGVGAGG 408
AG GA +PG + P A + + G R VG G G
Sbjct: 780 GGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGEN 839
Query: 409 FPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAK 468
P VG G G G PGV G PG G G SP Q A + G P +
Sbjct: 840 GPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGR 899
Query: 469 AAAKAAQFGLVPG----VGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPG 523
PG VG PG APG G PG PG+ PG G
Sbjct: 900 GTQGPPGATGFPGSAGRVG-PPGPAGAPGPAGPLG---EPGKEGPPGLRGDPGSHGRVGD 955
Query: 524 IGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGVGAGVPGLGVGAGV 582
GP G Q G AG G VG+PG G+PGL AG
Sbjct: 956 RGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGT 1015
Query: 583 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 642
PG GA PG +G G+ G VG PG AG A +
Sbjct: 1016 PGKVGPTGATG-------DKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERG 1068
Query: 643 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAK 678
G G AGL G G PG G G P A +
Sbjct: 1069 DRGDPGPAGL----PGSQGAPGTPGPVGAPGDAGQR 1100
Score = 137 bits (344), Expect = 4e-32
Identities = 230/753 (30%), Positives = 264/753 (35%), Gaps = 143/753 (18%)
Query: 26 PGGVPGAI--PG-----GVPGGVFYPGA-GL----GALG-------GGALGPGGKPLKPV 66
P G PG + PG G PG +PG+ GL GA G G G G P +P
Sbjct: 505 PRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPG 564
Query: 67 PGGLAGAGLGAGLGAFPAVTFP-GALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL---- 121
GL GA GL P V P G L P G A G+ G PG GL
Sbjct: 565 EPGLPGA---RGLTGNPGVQGPEGKLGPLG-APGEDGRPGPPGSIGIRGQPGSMGLPGPK 620
Query: 122 GVSAAPSVPGAV--VPQPGAGVKPGKVPGVGLPGVYPGGVLPGAR----------FPGVG 169
G S P PG PG PGK VG G L G R F G+
Sbjct: 621 GSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLP 680
Query: 170 VLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTT 228
PG P G G KP GV G PG VGP G P G P + + PG GLP
Sbjct: 681 GPPG-PPGEGGKPGDQGVPGD----PGAVGPLG---PRGERGNPGERGE-PGITGLPGEK 731
Query: 229 GKLPYGYGPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKFGAGAAGVLPG 281
G + G+GP G G+ G +G P TG G + A + G G G
Sbjct: 732 G-MAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790
Query: 282 VGGAGVPGVPGAI--PGIGGIAG----------VGTPAAAAAAAAAAKAAKYGAAAGLVP 329
G G G+PG + PG G G VG P + + + GA P
Sbjct: 791 AGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGP 850
Query: 330 GGPGFGPGVVGVPG----------------AGVPGV----GVPGA----GIPVVPGA-GI 364
GP PGV G PG AG PG GVPG G PGA G
Sbjct: 851 QGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGF 910
Query: 365 PGAAVPGVVSPEAAAKAAAKAAKYGARPGV----GVGGIP-TYGV----GAGGFPGFGVG 415
PG+A G V P A A A G PG G+ G P ++G G G PG G G
Sbjct: 911 PGSA--GRVGPPGPAGAPGPAGPLG-EPGKEGPPGLRGDPGSHGRVGDRGPAGPPG-GPG 966
Query: 416 VGGIPGVAGVPGVGGVPGVGGVPGV-GISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAA 474
G PG G PG G PG G G GI + G+ PA K A
Sbjct: 967 DKGDPGEDGQPGPDGPPGPAGTTGQRGIV--GMPGQRGERGMPGLPGPAGTPGKVGPTGA 1024
Query: 475 QFGLVPGVGVAP----GVGVAPGVGVAPGVGLAPGVGVA---------PGVGVAPGVGVA 521
P V P G PG G PG A PG PG A
Sbjct: 1025 TGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGA 1084
Query: 522 PGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAG 581
PG PG V A + + G PG +G PG G+PG G
Sbjct: 1085 PGT-PGPVGAPGDAGQR---------------GDPGSRGPIGPPGRAGKRGLPGPQGPRG 1128
Query: 582 VPGFGAVPGALAAAKAAKYGA--AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAA 639
G G + +PG G G G GIPG GP +
Sbjct: 1129 DKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEG 1188
Query: 640 KAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 672
G +G G+ G VG G G G G P
Sbjct: 1189 NPGPLGPIGPPGVRG-SVGEAGPEGPPGEPGPP 1220
Score = 127 bits (318), Expect = 5e-29
Identities = 212/716 (29%), Positives = 244/716 (34%), Gaps = 111/716 (15%)
Query: 44 PGAGLGALGGGALGPGGKP-LKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAA 102
PG G G G G G+P L PV G+ G AG PG+ P G
Sbjct: 100 PGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGP--------PGSQGPRGERGPKGR 151
Query: 103 YKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV-PQPGAGVKPGKVPGVGLP--------- 152
+ G+ G PGV G AP PG P P +P GL
Sbjct: 152 -PGPRGPQGIDGEPGVPGQ--PGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQV 208
Query: 153 GVYPGGVLP-GARFPGVGVLPGVPTGAGVK--PKAPGVGGAFAGIPGVGPFGGP------ 203
G+ PG V P G R P L G GAG P PG G I GP G P
Sbjct: 209 GLMPGSVGPVGPRGPQG--LQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGED 266
Query: 204 -QPG-------VPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG- 254
+PG V A PG GLP G G G+ G G+ G P G
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHR----GHKGLEGPKGEVGAPGSKGE 322
Query: 255 VGPQAAAAAAAKAAAKFGAGAAGVL-----PGVGGA-GVPGVPG-----AIPGIGGIAG- 302
GP A + G G L PG GA G+PG PG IPG G G
Sbjct: 323 AGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGN 382
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPG----VGVPGAGIP 357
G A A G P GP PG+ G G G PG G PG P
Sbjct: 383 PGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGP 442
Query: 358 VVPG-AGIPGAAVP-GVVSPEAAAKAAAKAAKYGARPGVGVGGIP-TYGV---------- 404
PG AG PG+ P G P+ G + G G P +G+
Sbjct: 443 --PGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEE 500
Query: 405 ---GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGT 461
G G PG VG G G G PG G PG G+PG + + + K G
Sbjct: 501 GKRGPRGDPG-TVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGD 559
Query: 462 PAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVA 521
P A GL GV G +G APG PG + G+ PG
Sbjct: 560 PGRPGEPGLPGAR--GLTGNPGVQGPEGKLGPLG-APGEDGRPGPPGSIGIRGQPGSMGL 616
Query: 522 PG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA 580
PG G G A Q R A G G G VG PGL AG G
Sbjct: 617 PGPKGSSGDPGKPGEAGNAGVPGQ-RGAPGKD-GEVGPSGPVGPPGL---AGERGEQGPP 671
Query: 581 GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 640
G GF +PG PG G G G G+PG GP +
Sbjct: 672 GPTGFQGLPGP-------------PGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGE 718
Query: 641 AAQFGLVGAAG----LGGLGVGG-LGVPGVGGLGGI--PPAAAAKAAKYGVAARPG 689
+ G+ G G GG G G G PG G G PP + G+A PG
Sbjct: 719 RGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPG 774
Score = 99.8 bits (247), Expect = 8e-21
Identities = 149/499 (29%), Positives = 175/499 (35%), Gaps = 95/499 (19%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGA 81
P P G PG P G PG PG G+ G A PG K + GG+ G G
Sbjct: 739 PDGPKGSPG--PSGTPGDTGPPGLQGMPGERGIAGTPGPKGDR---GGIGEKGAEGTAGN 793
Query: 82 FPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-------GVSAAPSVPGAVV 134
A PG L P G A K GL G PG G G + A G
Sbjct: 794 DGARGLPGPLGPPGPAGPTGE-KGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQG 852
Query: 135 PQPGAGVK-----PGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK--PKAPGV 187
P GVK PG+ G PG P G+ G +PG+ G G + P A G
Sbjct: 853 PDGQPGVKGEPGEPGQKGDAGSPG--PQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGF 910
Query: 188 GGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKA 247
G+ + GP G P P PLG P K PG G P + G++ GP G G G
Sbjct: 911 PGSAGRVGPPGPAGAPGPAGPLGEPGKEGP-PGLRGDPGSHGRVG-DRGPAGPPGGPGDK 968
Query: 248 GYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGV-----LPGVGG-AGVPGV---------- 290
G P G GP A + G G +PG+ G AG PG
Sbjct: 969 GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1028
Query: 291 --PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA---- 344
PG + G VG P A + GA G PG G+PG+
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVG---ERGDRGDPGPAGLPGSQGAP 1085
Query: 345 GVPG-VGVPG-AGIPVVPGA----GIPGAA----VPGVVSPEAAAKAAAKAAKYGARPGV 394
G PG VG PG AG PG+ G PG A +PG P G +
Sbjct: 1086 GTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHR 1145
Query: 395 GVGGI--------PTYGVGAGGFPG-FGV-------------------------GVGGIP 420
G G+ P G+ G PG FG GV G
Sbjct: 1146 GFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSV 1205
Query: 421 GVAGVPGVGGVPGVGGVPG 439
G AG G G PG G PG
Sbjct: 1206 GEAGPEGPPGEPGPPGPPG 1224
Score = 80.5 bits (197), Expect = 5e-15
Identities = 129/409 (31%), Positives = 145/409 (35%), Gaps = 63/409 (15%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPGAGLGALGG-------GALGPGGKPLKPVPGGLA 71
P P GVPG G G PG +PG+ G +G G GP G+P K P GL
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSA-GRVGPPGPAGAPGPAGPLGEPGKEGPPGLR 944
Query: 72 G-AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAG----AGLGGVPGVGGL-GVSA 125
G G +G PG PG D + G AG G G+ G+ G
Sbjct: 945 GDPGSHGRVGDRGPAGPPGG--PGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRG 1002
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVY--PGGVLPGARFPGVGVLPGVPTGAGVKPK 183
+PG PG PGKV G G PG V P VG PG P G
Sbjct: 1003 ERGMPGL----PGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGE-PG-PEGPAGNDG 1056
Query: 184 APGVGGAFAGIPGVGPFGGPQPGVPLGYPIK--APKLPGGYGLPYTTGKL--PYGYGPGG 239
PG GA VG G P G P AP PG G P G+ P GP G
Sbjct: 1057 TPGRDGA------VGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIG 1110
Query: 240 VAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGG 299
G AGK G P GPQ + G G G G+ G+PG PG G
Sbjct: 1111 PPGRAGKRGLP-----GPQGPRGDKGDHGDRGDRGQKGHR---GFTGLQGLPGP-PGPNG 1161
Query: 300 IAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 358
G G P G P GP PGV G G P G PG P
Sbjct: 1162 EQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGP-EGPPGEPGPP 1220
Query: 359 VPGAGIPG---AAVPGVVS----------PEAAAKAAAKAAKYGARPGV 394
P G PG AA+ ++ PE AA K PGV
Sbjct: 1221 GP-PGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGV 1268
Score = 70.1 bits (170), Expect = 7e-12
Identities = 113/378 (29%), Positives = 135/378 (35%), Gaps = 69/378 (18%)
Query: 330 GGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKY 388
G FG G G G PG+ +PVV G G PG A P P + + K
Sbjct: 103 GNTNFGRGRKGQKGE--PGL------VPVVTGIRGRPGPAGP----PGSQGPRGERGPK- 149
Query: 389 GARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEAQ 447
RPG P G+ G PGV G PG G PG PG G+S
Sbjct: 150 -GRPG----------------PRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFS 192
Query: 448 AAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVG 507
A A K G+G+ Q GL+PG V P VG GL G
Sbjct: 193 AQMAGLDEKSGLGS-------------QVGLMPG-------SVGP-VGPRGPQGLQGQQG 231
Query: 508 VAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIPGLGVGV 562
A G PG PG +GP G K + G AG PG
Sbjct: 232 GAGPTG-PPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFP 290
Query: 563 GVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGG 622
G PGL PGL G G G + A +K A G +G +G LG G+PG
Sbjct: 291 GAPGL------PGLKGHRGHKGLEGPKGEVGAP-GSKGEAGPTGPMGAMGPLGPRGMPGE 343
Query: 623 VVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA--A 680
GP A A + G +G G+ G G G PG+ G G A +
Sbjct: 344 RGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPG-SSGFPGNPGMKGEAGPTGARGPEGPQG 402
Query: 681 KYGVAARPGFGLSPIFPG 698
+ G PG SP PG
Sbjct: 403 QRGETGPPGPVGSPGLPG 420
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 150 bits (378), Expect = 5e-36
Identities = 224/767 (29%), Positives = 273/767 (35%), Gaps = 116/767 (15%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGA------- 73
P PG G PG + PG L G G GP G P P P G GA
Sbjct: 538 PGPPGRDGSKGMRGEPGELGEPG-----LPGEVGMRGPQGPPGLPGPPGRVGAPGLQGER 592
Query: 74 ---GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPG-VGGLGVSAAPSV 129
G G FPG PG + +G+ G G G +G + P V
Sbjct: 593 GEKGTRGEKGERGLDGFPGK--PGDTGQ-----QGRPGPSGVAGPQGEKGDVGPAGPPGV 645
Query: 130 PGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVG 188
PG+VV Q G + G G G PG PGAR P G G P G++ K +G
Sbjct: 646 PGSVVQQEGLKGEQGAPGPRGHQGA-PGP--PGARGPIGPEGRDGPPGLQGLRGKKGDMG 702
Query: 189 GAFAGIPGVGPFGGP--QPGVP-LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 245
GIPG+ GP PGVP P +P LPG G P G P GP G G G
Sbjct: 703 P--PGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGP-PGPTGPPGKDGPNG 759
Query: 246 KAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG-V 303
G P G G + K + G G+ G G G+PGA PG G+ G
Sbjct: 760 PPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGA-PGFPGVRGEK 818
Query: 304 GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG---------- 353
G G P GP PG+ G P +PG
Sbjct: 819 GDQGEKGELGLPGLKGDRGEKGEAGPAGP---PGLPGTTSLFTPHPRMPGEQGPKGEKGD 875
Query: 354 AGIPVVPG-AGIPG-------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVG 405
G+P PG G PG PG E A A A GA VG G P+ G
Sbjct: 876 PGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPG-PSGPPG 934
Query: 406 AGGFPGF--------------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAA 451
+ G PG G G PG G G G PG+ G PG G E
Sbjct: 935 SVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGE-PGLRG 993
Query: 452 AKAAKYGVGTPAAAAAKAAAKAAQFG--LVPGVGVAPGVGVAPGVGVAPGVGLA--PGVG 507
+ +GT AA ++ G V G APG+ +PG PG+G+A PG
Sbjct: 994 SPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPS 1053
Query: 508 VAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAK--VAAKAQLRAAAGLG--------- 552
PG +PG PG GP G A + + K L + G
Sbjct: 1054 GPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDV 1113
Query: 553 -----------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG 601
G+PG GVPG G G AG PG PG +A + ++
Sbjct: 1114 CNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPG-IAGPQGSQGE 1172
Query: 602 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL----GGLGV 657
G +G G G G+PG + G A A A G+ G+ G G G
Sbjct: 1173 RGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGP 1232
Query: 658 GGL-GVPGVGGLGGI-----PPAAAAKAAKYGVAARPGFGLSPIFPG 698
GL G+PG G G PP KA + G+ G P F G
Sbjct: 1233 SGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKG 1279
Score = 147 bits (370), Expect = 4e-35
Identities = 209/735 (28%), Positives = 259/735 (35%), Gaps = 96/735 (13%)
Query: 23 PSRPGGVPGAI--------PGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAG 74
P+ P GVPG++ G PG + GA G +GP G+ P GL G
Sbjct: 639 PAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKK 698
Query: 75 LGAGLGAFPAVT-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGA 132
G P + G P GV G GG PG+ G +G P PG
Sbjct: 699 GDMGPPGIPGLLGLQGPPGPPGVPGPP----------GPGGSPGLPGEIGFPGKPGPPGP 748
Query: 133 VVPQ-----------PGAGVKPGKVPGVGLPGVYPG--------GVLPGARFPGVGVLPG 173
P PG +PG+ GLPG PG G+ G LPG
Sbjct: 749 TGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGK-PGLRGEIGEQGLAGRPGEKGEAGLPG 807
Query: 174 VPTGAGVKPKAPGVGG-AFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL 231
P GV+ + G G+PG+ G G P G P LPG L ++
Sbjct: 808 APGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAG----PPGLPGTTSLFTPHPRM 863
Query: 232 PYGYGPGGVAGAAGKAGYPTGTG-------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGG 284
P GP G G G G P G GP A + A GAAG G
Sbjct: 864 PGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGH 923
Query: 285 AGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG 343
G PG P PG G G+ GTP A + G+ + P G PG+ G PG
Sbjct: 924 VGAPG-PSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPG 982
Query: 344 AGVPGVGVPG-AGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTY 402
G G PG G P +PG + A G V + K G R G+ G P
Sbjct: 983 KGKD--GEPGLRGSPGLPGP-LGTKAACGKVRGSENCALGGQCVK-GDRGAPGIPGSP-- 1036
Query: 403 GVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGV-GT 461
G+ G P G+GV G PG +G PG G PG G+PG P+ A G G
Sbjct: 1037 --GSRGDP--GIGVAGPPGPSGPPGDKGSPGSRGLPGFP-GPQGPAGRDGAPGNPGERGP 1091
Query: 462 PAAAAAKAAAKAAQFGLV---------PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGV 512
P + L+ PG PG+ PG GV PG G
Sbjct: 1092 PGKPGLSSLLSPGDINLLAKDVCNDCPPG---PPGLPGLPGFKGDKGV---PGKPGREGT 1145
Query: 513 GVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGVG 570
G PG+ GP G+A S + A ++ G G+PG +G PG
Sbjct: 1146 EGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGF---MGPPGNPGP 1202
Query: 571 AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAA 630
G G+ AG PG PG + + +PG+ G G G G PG G A
Sbjct: 1203 PGADGIAGAAGPPGIQGSPGK-EGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAG 1261
Query: 631 AAAAAKAAAKAAQFGLVGAAGLGGL-----GVGGLGVPGVGGLGGI--PPAAAAKAAKYG 683
G G G G G +G+PG GL G G
Sbjct: 1262 EPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQG 1321
Query: 684 VAARPGFGLSPIFPG 698
PG SP PG
Sbjct: 1322 PRGPPGKNGSPGSPG 1336
Score = 134 bits (337), Expect = 3e-31
Identities = 209/718 (29%), Positives = 248/718 (34%), Gaps = 117/718 (16%)
Query: 59 GGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPG---GVADAAAAYKAAKAGAGLGGV 115
G K V G + G +GA V PG G+ K K GL G
Sbjct: 481 GEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGP 540
Query: 116 PGVGGL-------GVSAAPSVPGAV---VPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGA 163
PG G G P +PG V PQ PG PG+V GL G G
Sbjct: 541 PGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGE 600
Query: 164 RFP-GVGVLPGVP--TGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPG 220
+ G+ PG P TG +P GV G VGP G PGVP G ++ L G
Sbjct: 601 KGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAG--PPGVP-GSVVQQEGLKG 657
Query: 221 GYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLP 280
G P G G G GA G G P G GP K G G+L
Sbjct: 658 EQGAPGPRGH----QGAPGPPGARGPIG-PEGRD-GPPGLQGLRGKKGDMGPPGIPGLLG 711
Query: 281 GVGGAGVPGVPGAIPGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGP 336
G G PGVPG PG GG G +G P K G P GP P
Sbjct: 712 LQGPPGPPGVPGP-PGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDG------PNGPPGPP 764
Query: 337 GVVGVPGA----GVPG-------VGVPG-AGIPVVPG-AGIPGA-AVPGVVSPEAAAKAA 382
G G PG G+PG +G G AG P G AG+PGA PGV +
Sbjct: 765 GTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEK 824
Query: 383 AKAAKYGARPGVGVGGIPTYGVGAGGFPGF---------------GVGVGGIPGVAGVPG 427
+ G + G G G G PG G G PG+ G PG
Sbjct: 825 GELGLPGLKGDRGEKG-EAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPG 883
Query: 428 VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPG 487
+ G PG G G P A+ A A G P A A PG PG
Sbjct: 884 LQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGA---------PGPSGPPG 934
Query: 488 VGVAPGVGVAPG-------------------VGL-----APGVGVAPGVGV--APGVGVA 521
APG+ PG VG APG+ PG G PG+ +
Sbjct: 935 SVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGS 994
Query: 522 PGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA 580
PG+ GP G AA + A G G + G G+PG G PG+GV A
Sbjct: 995 PGLPGPLGTKAACGK-----VRGSENCALG-GQCVKGDRGAPGIPGSPGSRGDPGIGV-A 1047
Query: 581 GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 640
G PG PG K + +PG G G G G PG GP + +
Sbjct: 1048 GPPGPSGPPG----DKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLS-SLLS 1102
Query: 641 AAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
L+ G G+PG+ G G K + G + G P PG
Sbjct: 1103 PGDINLLAKDVCNDCPPGPPGLPGLPGFKG-DKGVPGKPGREGTEGKKGEAGPPGLPG 1159
Score = 118 bits (295), Expect = 2e-26
Identities = 219/740 (29%), Positives = 258/740 (34%), Gaps = 107/740 (14%)
Query: 22 HPSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG-----GALGPGGKPLKPVPGGLAGA-G 74
+P PG V P G PG V PG G G GA G G P P G GA G
Sbjct: 917 NPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPG 976
Query: 75 L----GAGLGAFPAVT-FPGALVPGGVADAAAAYKA-AKAGAGLGGVPGVGGLGVSAAPS 128
L G G P + PG +PG + AA K LGG G G P
Sbjct: 977 LPGPPGKGKDGEPGLRGSPG--LPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPG 1034
Query: 129 VPGAVVPQPGAGVK--PGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPG 186
PG+ PG GV PG G G LPG FPG P P G P PG
Sbjct: 1035 SPGSR-GDPGIGVAGPPGPSGPPGDKGSPGSRGLPG--FPG----PQGPAGRDGAPGNPG 1087
Query: 187 VGGAFAGIPGVGPFGGPQP----------GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYG 236
G G PG+ P P G P P LPG G GK P G
Sbjct: 1088 ERGP-PGKPGLSSLLSPGDINLLAKDVCNDCPPGPP-GLPGLPGFKGDKGVPGK-PGREG 1144
Query: 237 PGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGG-AGVPGVPGAIP 295
G G AG G P G+ + A + G PGV G G PG PG P
Sbjct: 1145 TEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGP-P 1203
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL--VPG-----------GPGFGPGVVGVP 342
G GIAG P + +GL +PG GP PG G P
Sbjct: 1204 GADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEP 1263
Query: 343 GA-------GVPGV-------GVPG----AGIPVVPGA-GIPG----AAVPGVVSPEAAA 379
G G PG G PG +G +PG G+PG G P+
Sbjct: 1264 GLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPR 1323
Query: 380 KAAAKAAKYGARPGVGVGGIPTYGVGAG-----GFPGF--GVGVGGIPGVAGVPGVGGVP 432
K G+ G G P G G PGF G G PG GVPG GVP
Sbjct: 1324 GPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVP 1383
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAP 492
G G PG K G G P GL+ G+ PG
Sbjct: 1384 GKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPG--IPGHKGHTGLMGPQGL-PGENGPV 1440
Query: 493 GVGVAPGVGLAPGV-GVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGL 551
G PG PG+ G +P + + + +G A A++ A ++++ G
Sbjct: 1441 GPPGPPGQPGFPGLRGESPSMETLRRL-IQEELGKQLETRLAYLLAQM-PPAYMKSSQG- 1497
Query: 552 GAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL 611
G PG G+PG G PG G+ G + P + AK PGV G
Sbjct: 1498 RPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEG-PSGPIGPKGERGAKGDPGAPGV-GLR 1555
Query: 612 GALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGI 671
G +G GIPG G A+ GL G G G G G PG+ G G
Sbjct: 1556 GEMGPPGIPGQPGEPG-------------YAKDGLPGIPGPQG-ETGPAGHPGLPGPPGP 1601
Query: 672 PPAAAAKAAKY--GVAARPG 689
P Y +AARPG
Sbjct: 1602 PGQCDPSQCAYFASLAARPG 1621
Score = 113 bits (283), Expect = 5e-25
Identities = 191/640 (29%), Positives = 233/640 (36%), Gaps = 98/640 (15%)
Query: 110 AGLGGVPGVGG-LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGV 168
AG G GV G +G+ GA+ P G K K G G+ P G +
Sbjct: 480 AGEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEK----GDVGIGPFGQGEKGEKGSL 535
Query: 169 GVLPGVPTGAGVKPKA--PGVGGAFAGIPGVGPFGGPQ--PGVPLGYP--IKAPKLPGGY 222
G LPG P G K PG G G+PG GPQ PG+P G P + AP L G
Sbjct: 536 G-LPGPPGRDGSKGMRGEPGELGE-PGLPGEVGMRGPQGPPGLP-GPPGRVGAPGLQGER 592
Query: 223 GLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGV 282
G T G+ G G+ G GK G TG P + A G G V
Sbjct: 593 GEKGTRGEK----GERGLDGFPGKPG-DTGQQGRPGPSGVA----------GPQGEKGDV 637
Query: 283 GGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 341
G AG PGVPG++ G+ G G P A GA + P G PG+ G+
Sbjct: 638 GPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPP---GARGPIGPEGRDGPPGLQGL 694
Query: 342 PG-------AGVPGV----GVPG-AGIPVVPG----AGIPG-AAVPGVVSPEAAAKAAAK 384
G G+PG+ G PG G+P PG G+PG PG P K
Sbjct: 695 RGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGK 754
Query: 385 AAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G G G P G G PG G+ G G G+ G G G G+PG P
Sbjct: 755 DGPNGPPGPPGTKGEPGER-GEDGLPG-KPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFP 812
Query: 445 EAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPG-VGVAPGVGVAPGVGLA 503
+ + K +G P + A PG+ PG + PG
Sbjct: 813 GVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGL---PGTTSLFTPHPRMPGEQGP 869
Query: 504 PGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVG 561
G PG+ PG+ PG +GP G AK Q A G AG PG
Sbjct: 870 KGEKGDPGLPGEPGLQGRPGELGPQG------PTGPPGAKGQEGAHGAPGAAGNPGAPGH 923
Query: 562 VGVPGLGVGAGVPGLGVGAGVPGFGAVPG--ALAAAKAAKYGAAVPGVLGGLGALGGVGI 619
VG PG +G PG G PG PG K A PG +G G G G+
Sbjct: 924 VGAPG---PSGPPG---SVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGL 977
Query: 620 PG----------GVVGA----GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL----- 660
PG G+ G+ GP AA + L G G G G+
Sbjct: 978 PGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPG 1037
Query: 661 --GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
G PG+G G PP + G PG P FPG
Sbjct: 1038 SRGDPGIGVAG--PPGPSGPPGDKG---SPGSRGLPGFPG 1072
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 145 bits (366), Expect = 1e-34
Identities = 166/512 (32%), Positives = 197/512 (38%), Gaps = 78/512 (15%)
Query: 136 QPGAGVKPGK--VPGVGLPGVY----PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 189
+PG PG +PG G+PG+ P G PG PG+ +PG P G+ PG G
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGY-PGVGKPGMPGMPGKPGAMGM----PGAKG 179
Query: 190 AFAGIPGVGPFGGPQPGVPLGYPIKAPKL--PGGYGLPYTTGKLPYG-YGPGGVAGAAGK 246
+GP G P P P G P P + PGG GLP G P G GP G+ G G
Sbjct: 180 EIGQKGEIGPMGIPGPQGPPG-PHGLPGIGKPGGPGLPGQPG--PKGDRGPKGLPGPQGL 236
Query: 247 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTP 306
G G G A PGV G PG+ G PG G+ GVG P
Sbjct: 237 RGPKGDKGFGMPGA-------------------PGVKGP--PGMHGP-PGPVGLPGVGKP 274
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA-GIPVVPG--AG 363
K GA P GP PGV G P G+PG+G PG GIP PG G
Sbjct: 275 GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP--GIPGIGKPGQDGIPGQPGFPGG 332
Query: 364 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPG 421
+PG+ P PG+G G P G GG PG +G G G
Sbjct: 333 KGEQGLPGLPGPPGL-------------PGIGKPGFPGPKGDRGMGGVPG-ALGPRGEKG 378
Query: 422 VAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPG 481
G PG+GG PG G+PG+ P A G G K PG
Sbjct: 379 PIGAPGIGGPPGEPGLPGIP-GPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGE-----PG 432
Query: 482 VGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAA 541
+ PG G PG+ PG G GV PG+ PG K +
Sbjct: 433 LQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGV-PG--LLGPKGEPGIPG 489
Query: 542 KAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG 601
L+ G+ GI G +G PG+ G PGL G PG G PG A +G
Sbjct: 490 DQGLQGPPGI-PGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK-PGV-----AGLHG 542
Query: 602 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA 633
PG G LG G G+PG GP A
Sbjct: 543 P--PGKPGALGPQGQPGLPGPPGPPGPPGPPA 572
Score = 132 bits (332), Expect = 1e-30
Identities = 170/493 (34%), Positives = 202/493 (40%), Gaps = 81/493 (16%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGG----------GAL 56
A P+ G + L S+ P G PG P G PG PG G+ + G G
Sbjct: 103 AVPKKGKEIPLASLRGEQGPRGEPG--PRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKP 160
Query: 57 GPGGKPLKPVPGGLAGAGLGAGL-GAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGV 115
G G P KP G+ GA G G + PG P G K G GL G
Sbjct: 161 GMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPG--GPGLPGQ 218
Query: 116 PGV-GGLGVSAAPSVPGAVVPQPGAGVKPGKVPGV-GLPGVY--PGGV-LPGARFPGVGV 170
PG G G P G P+ G PGV G PG++ PG V LPG PGV
Sbjct: 219 PGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTG 278
Query: 171 LPGVPTGAGVKPKAPGVGGAFA--GIPGVGPFGGPQPGVP-LGYPIKAPKLPGGYGLPYT 227
PG P G KP APG G G+PGV GP PG+P +G P + +PG G P
Sbjct: 279 FPG-PQGPLGKPGAPGEPGPQGPIGVPGVQ---GP-PGIPGIGKPGQ-DGIPGQPGFPGG 332
Query: 228 TGK--LPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL--PGVG 283
G+ LP GP G+ G GK G+P GP+ A G G + PG+G
Sbjct: 333 KGEQGLPGLPGPPGLPGI-GKPGFP-----GPKGDRGMGGVPGALGPRGEKGPIGAPGIG 386
Query: 284 GA-GVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA--GL--VPGGPGF--- 334
G G PG+PG IPG G G +G P G GL PG PGF
Sbjct: 387 GPPGEPGLPG-IPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGE 445
Query: 335 --GPGVVGVPGA----------GVPGV-GVPGA----GIPVVPG-------AGIPGAAVP 370
PG+ G+PG GVPG+ GVPG G P +PG GIPG P
Sbjct: 446 VGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGP 505
Query: 371 -GVVSPEAAAKAAAKAAKYGAR--PGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 427
G + P + G PG+G G+ G G PG G G G G+PG
Sbjct: 506 SGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGV----AGLHGPPG-KPGALGPQGQPGLPG 560
Query: 428 VGGVPGVGGVPGV 440
G PG G P V
Sbjct: 561 PPGPPGPPGPPAV 573
Score = 129 bits (325), Expect = 7e-30
Identities = 179/574 (31%), Positives = 211/574 (36%), Gaps = 134/574 (23%)
Query: 123 VSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 182
+ AP + VP+ G ++P L G PG R P P
Sbjct: 93 IQPAPRMGKEAVPKKGK-----EIPLASLRGEQGPRGEPGPRGP---------------P 132
Query: 183 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVA 241
PG+ G GIPG+ GPQ GYP + P +PG G P G +P G G
Sbjct: 133 GPPGLPGH--GIPGIKGKPGPQ-----GYPGVGKPGMPGMPGKPGAMG-MPGAKGEIGQK 184
Query: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 301
G G G P GPQ G LPG+G G PG+PG PG G
Sbjct: 185 GEIGPMGIP-----GPQ-------------GPPGPHGLPGIGKPGGPGLPGQ-PGPKGDR 225
Query: 302 GV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGV-GVPGAGIP 357
G G P A V G PG PG VG+PG G PGV G PG P
Sbjct: 226 GPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP 285
Query: 358 VVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV-GV 416
+ G PGA PG P+ +GV G+ G G PG G G
Sbjct: 286 L----GKPGA--PGEPGPQGP---------------IGVPGVQ----GPPGIPGIGKPGQ 320
Query: 417 GGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQF 476
GIPG G PG G G+ G+PG P G+G P K
Sbjct: 321 DGIPGQPGFPGGKGEQGLPGLPGPPGLP-------------GIGKPGFPGPKGDRG---M 364
Query: 477 GLVPGV----GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAA 531
G VPG G +G APG+G PG PG+ PG PG PG G GG+
Sbjct: 365 GGVPGALGPRGEKGPIG-APGIGGPPGEPGLPGI---PGPMGPPGAIGFPGPKGEGGIVG 420
Query: 532 AAKSAAKVAAKAQLRAAAGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGA-------GV 582
+ GL G PG VG PG+ G+PG +G GV
Sbjct: 421 PQGPPGP-------KGEPGLQGFPGKPGFLGEVGPPGM---RGLPG-PIGPKGEAGQKGV 469
Query: 583 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 642
PG VPG L PG+ G G G GIPG +GP +
Sbjct: 470 PGLPGVPGLLGPK-------GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPG 522
Query: 643 QFGLVGAAGLGGLGVGGL----GVPGVGGLGGIP 672
G G G+G GV GL G PG G G P
Sbjct: 523 LPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQP 556
Score = 122 bits (306), Expect = 1e-27
Identities = 167/562 (29%), Positives = 206/562 (36%), Gaps = 104/562 (18%)
Query: 179 GVKPKAPGVGGAFAG-IPGVGPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLP 232
G+KP P + IP P G P +PL A P L G P+ LP
Sbjct: 32 GIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPH----LP 87
Query: 233 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
A GK P P A+ + G PG+ G G+PG+ G
Sbjct: 88 QYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKG 147
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG 348
PG G GVG P +PG PG PG +G+PGA G G
Sbjct: 148 K-PGPQGYPGVGKPG--------------------MPGMPG-KPGAMGMPGAKGEIGQKG 185
Query: 349 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
+G+PG P P G+PG PG P + K G R G+ G P
Sbjct: 186 EIGPMGIPGPQGPPGPH-GLPGIGKPG--GPGLPGQPGPK----GDRGPKGLPG-PQGLR 237
Query: 405 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA 464
G G GFG+ G PGV G PG+ G PG G+PGVG P + G P
Sbjct: 238 GPKGDKGFGMP--GAPGVKGPPGMHGPPGPVGLPGVG-KPGVTGFPGPQGPLGKPGAPGE 294
Query: 465 AAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI 524
+ PG+ PG+G PG PG PG G+ PG PGI
Sbjct: 295 PGPQGPIGVPGVQGPPGI---PGIG-KPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGI 350
Query: 525 GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG-LGV-----GVGVPGLGVGAGVPGLGV 578
G G + G+G G+PG LG +G PG+G G PGL
Sbjct: 351 GKPGFPGP-------------KGDRGMG-GVPGALGPRGEKGPIGAPGIGGPPGEPGL-- 394
Query: 579 GAGVPGFGAVPGALAAAKAAKYGAAV--------------------PGVLGGLGALGGVG 618
G+PG PGA+ G V PG LG +G G G
Sbjct: 395 -PGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRG 453
Query: 619 IPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL-GVPGVGGLGGIPPAAA 676
+PG + GP A GL+G G G+ G GL G PG+ G+GG P
Sbjct: 454 LPGPI---GPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGG-PSGPI 509
Query: 677 AKAAKYGVAARPGFGLSPIFPG 698
G PG P FPG
Sbjct: 510 GPPGIPGPKGEPGLPGPPGFPG 531
Score = 110 bits (276), Expect = 3e-24
Identities = 139/415 (33%), Positives = 164/415 (39%), Gaps = 76/415 (18%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGG-----GALGPGGKPLKPVPGGLAGAGL 75
P PG G PG G PG V PG G + G G LG G P +P P G G
Sbjct: 248 PGAPGVKGPPGM--HGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPG 305
Query: 76 GAGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV 134
G P + PG +PG + K GL G+PG GL P PG
Sbjct: 306 VQGPPGIPGIGKPGQDGIPG-----QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPG--- 357
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGI 194
P+ G+ G VPG P G + GA PG+G PG P G+ P G GA G
Sbjct: 358 PKGDRGM--GGVPGALGPRGEKGPI--GA--PGIGGPPGEPGLPGI-PGPMGPPGAI-GF 409
Query: 195 PG-------VGPFGGPQP-GVP--LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAA 244
PG VGP G P P G P G+P K P G G P G LP GP G AG
Sbjct: 410 PGPKGEGGIVGPQGPPGPKGEPGLQGFPGK-PGFLGEVGPPGMRG-LPGPIGPKGEAGQK 467
Query: 245 GKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIG 298
G G P G+ GP+ + G G+ G G PG+PG +PG
Sbjct: 468 GVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPP 527
Query: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPGAGI 356
G G+G P A K PG GP PG+ G PG PG P A +
Sbjct: 528 GFPGIGKPGVAGLHGPPGK-----------PGALGPQGQPGLPGPPGP--PGPPGPPAVM 574
Query: 357 PVVP---GAGIP--GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
P P G +P G + GV P A YGA+ G G P Y + A
Sbjct: 575 PPTPPPQGEYLPDMGLGIDGVKPPHA----------YGAKKGKNGG--PAYEMPA 617
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 145 bits (366), Expect = 1e-34
Identities = 166/512 (32%), Positives = 197/512 (38%), Gaps = 78/512 (15%)
Query: 136 QPGAGVKPGK--VPGVGLPGVY----PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 189
+PG PG +PG G+PG+ P G PG PG+ +PG P G+ PG G
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGY-PGVGKPGMPGMPGKPGAMGM----PGAKG 179
Query: 190 AFAGIPGVGPFGGPQPGVPLGYPIKAPKL--PGGYGLPYTTGKLPYG-YGPGGVAGAAGK 246
+GP G P P P G P P + PGG GLP G P G GP G+ G G
Sbjct: 180 EIGQKGEIGPMGIPGPQGPPG-PHGLPGIGKPGGPGLPGQPG--PKGDRGPKGLPGPQGL 236
Query: 247 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTP 306
G G G A PGV G PG+ G PG G+ GVG P
Sbjct: 237 RGPKGDKGFGMPGA-------------------PGVKGP--PGMHGP-PGPVGLPGVGKP 274
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA-GIPVVPG--AG 363
K GA P GP PGV G P G+PG+G PG GIP PG G
Sbjct: 275 GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP--GIPGIGKPGQDGIPGQPGFPGG 332
Query: 364 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPG 421
+PG+ P PG+G G P G GG PG +G G G
Sbjct: 333 KGEQGLPGLPGPPGL-------------PGIGKPGFPGPKGDRGMGGVPG-ALGPRGEKG 378
Query: 422 VAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPG 481
G PG+GG PG G+PG+ P A G G K PG
Sbjct: 379 PIGAPGIGGPPGEPGLPGIP-GPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGE-----PG 432
Query: 482 VGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAA 541
+ PG G PG+ PG G GV PG+ PG K +
Sbjct: 433 LQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGV-PG--LLGPKGEPGIPG 489
Query: 542 KAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG 601
L+ G+ GI G +G PG+ G PGL G PG G PG A +G
Sbjct: 490 DQGLQGPPGI-PGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK-PGV-----AGLHG 542
Query: 602 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA 633
PG G LG G G+PG GP A
Sbjct: 543 P--PGKPGALGPQGQPGLPGPPGPPGPPGPPA 572
Score = 132 bits (332), Expect = 1e-30
Identities = 170/493 (34%), Positives = 202/493 (40%), Gaps = 81/493 (16%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGG----------GAL 56
A P+ G + L S+ P G PG P G PG PG G+ + G G
Sbjct: 103 AVPKKGKEIPLASLRGEQGPRGEPG--PRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKP 160
Query: 57 GPGGKPLKPVPGGLAGAGLGAGL-GAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGV 115
G G P KP G+ GA G G + PG P G K G GL G
Sbjct: 161 GMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPG--GPGLPGQ 218
Query: 116 PGV-GGLGVSAAPSVPGAVVPQPGAGVKPGKVPGV-GLPGVY--PGGV-LPGARFPGVGV 170
PG G G P G P+ G PGV G PG++ PG V LPG PGV
Sbjct: 219 PGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTG 278
Query: 171 LPGVPTGAGVKPKAPGVGGAFA--GIPGVGPFGGPQPGVP-LGYPIKAPKLPGGYGLPYT 227
PG P G KP APG G G+PGV GP PG+P +G P + +PG G P
Sbjct: 279 FPG-PQGPLGKPGAPGEPGPQGPIGVPGVQ---GP-PGIPGIGKPGQ-DGIPGQPGFPGG 332
Query: 228 TGK--LPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL--PGVG 283
G+ LP GP G+ G GK G+P GP+ A G G + PG+G
Sbjct: 333 KGEQGLPGLPGPPGLPGI-GKPGFP-----GPKGDRGMGGVPGALGPRGEKGPIGAPGIG 386
Query: 284 GA-GVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA--GL--VPGGPGF--- 334
G G PG+PG IPG G G +G P G GL PG PGF
Sbjct: 387 GPPGEPGLPG-IPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGE 445
Query: 335 --GPGVVGVPGA----------GVPGV-GVPGA----GIPVVPG-------AGIPGAAVP 370
PG+ G+PG GVPG+ GVPG G P +PG GIPG P
Sbjct: 446 VGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGP 505
Query: 371 -GVVSPEAAAKAAAKAAKYGAR--PGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 427
G + P + G PG+G G+ G G PG G G G G+PG
Sbjct: 506 SGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGV----AGLHGPPG-KPGALGPQGQPGLPG 560
Query: 428 VGGVPGVGGVPGV 440
G PG G P V
Sbjct: 561 PPGPPGPPGPPAV 573
Score = 129 bits (325), Expect = 7e-30
Identities = 179/574 (31%), Positives = 211/574 (36%), Gaps = 134/574 (23%)
Query: 123 VSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 182
+ AP + VP+ G ++P L G PG R P P
Sbjct: 93 IQPAPRMGKEAVPKKGK-----EIPLASLRGEQGPRGEPGPRGP---------------P 132
Query: 183 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVA 241
PG+ G GIPG+ GPQ GYP + P +PG G P G +P G G
Sbjct: 133 GPPGLPGH--GIPGIKGKPGPQ-----GYPGVGKPGMPGMPGKPGAMG-MPGAKGEIGQK 184
Query: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 301
G G G P GPQ G LPG+G G PG+PG PG G
Sbjct: 185 GEIGPMGIP-----GPQ-------------GPPGPHGLPGIGKPGGPGLPGQ-PGPKGDR 225
Query: 302 GV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGV-GVPGAGIP 357
G G P A V G PG PG VG+PG G PGV G PG P
Sbjct: 226 GPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP 285
Query: 358 VVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV-GV 416
+ G PGA PG P+ +GV G+ G G PG G G
Sbjct: 286 L----GKPGA--PGEPGPQGP---------------IGVPGVQ----GPPGIPGIGKPGQ 320
Query: 417 GGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQF 476
GIPG G PG G G+ G+PG P G+G P K
Sbjct: 321 DGIPGQPGFPGGKGEQGLPGLPGPPGLP-------------GIGKPGFPGPKGDRG---M 364
Query: 477 GLVPGV----GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAA 531
G VPG G +G APG+G PG PG+ PG PG PG G GG+
Sbjct: 365 GGVPGALGPRGEKGPIG-APGIGGPPGEPGLPGI---PGPMGPPGAIGFPGPKGEGGIVG 420
Query: 532 AAKSAAKVAAKAQLRAAAGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGA-------GV 582
+ GL G PG VG PG+ G+PG +G GV
Sbjct: 421 PQGPPGP-------KGEPGLQGFPGKPGFLGEVGPPGM---RGLPG-PIGPKGEAGQKGV 469
Query: 583 PGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 642
PG VPG L PG+ G G G GIPG +GP +
Sbjct: 470 PGLPGVPGLLGPK-------GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPG 522
Query: 643 QFGLVGAAGLGGLGVGGL----GVPGVGGLGGIP 672
G G G+G GV GL G PG G G P
Sbjct: 523 LPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQP 556
Score = 122 bits (306), Expect = 1e-27
Identities = 167/562 (29%), Positives = 206/562 (36%), Gaps = 104/562 (18%)
Query: 179 GVKPKAPGVGGAFAG-IPGVGPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLP 232
G+KP P + IP P G P +PL A P L G P+ LP
Sbjct: 32 GIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPH----LP 87
Query: 233 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
A GK P P A+ + G PG+ G G+PG+ G
Sbjct: 88 QYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKG 147
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG 348
PG G GVG P +PG PG PG +G+PGA G G
Sbjct: 148 K-PGPQGYPGVGKPG--------------------MPGMPG-KPGAMGMPGAKGEIGQKG 185
Query: 349 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
+G+PG P P G+PG PG P + K G R G+ G P
Sbjct: 186 EIGPMGIPGPQGPPGPH-GLPGIGKPG--GPGLPGQPGPK----GDRGPKGLPG-PQGLR 237
Query: 405 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA 464
G G GFG+ G PGV G PG+ G PG G+PGVG P + G P
Sbjct: 238 GPKGDKGFGMP--GAPGVKGPPGMHGPPGPVGLPGVG-KPGVTGFPGPQGPLGKPGAPGE 294
Query: 465 AAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI 524
+ PG+ PG+G PG PG PG G+ PG PGI
Sbjct: 295 PGPQGPIGVPGVQGPPGI---PGIG-KPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGI 350
Query: 525 GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG-LGV-----GVGVPGLGVGAGVPGLGV 578
G G + G+G G+PG LG +G PG+G G PGL
Sbjct: 351 GKPGFPGP-------------KGDRGMG-GVPGALGPRGEKGPIGAPGIGGPPGEPGL-- 394
Query: 579 GAGVPGFGAVPGALAAAKAAKYGAAV--------------------PGVLGGLGALGGVG 618
G+PG PGA+ G V PG LG +G G G
Sbjct: 395 -PGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRG 453
Query: 619 IPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL-GVPGVGGLGGIPPAAA 676
+PG + GP A GL+G G G+ G GL G PG+ G+GG P
Sbjct: 454 LPGPI---GPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGG-PSGPI 509
Query: 677 AKAAKYGVAARPGFGLSPIFPG 698
G PG P FPG
Sbjct: 510 GPPGIPGPKGEPGLPGPPGFPG 531
Score = 110 bits (276), Expect = 3e-24
Identities = 139/415 (33%), Positives = 164/415 (39%), Gaps = 76/415 (18%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGG-----GALGPGGKPLKPVPGGLAGAGL 75
P PG G PG G PG V PG G + G G LG G P +P P G G
Sbjct: 248 PGAPGVKGPPGM--HGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPG 305
Query: 76 GAGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV 134
G P + PG +PG + K GL G+PG GL P PG
Sbjct: 306 VQGPPGIPGIGKPGQDGIPG-----QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPG--- 357
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGI 194
P+ G+ G VPG P G + GA PG+G PG P G+ P G GA G
Sbjct: 358 PKGDRGM--GGVPGALGPRGEKGPI--GA--PGIGGPPGEPGLPGI-PGPMGPPGAI-GF 409
Query: 195 PG-------VGPFGGPQP-GVP--LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAA 244
PG VGP G P P G P G+P K P G G P G LP GP G AG
Sbjct: 410 PGPKGEGGIVGPQGPPGPKGEPGLQGFPGK-PGFLGEVGPPGMRG-LPGPIGPKGEAGQK 467
Query: 245 GKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIG 298
G G P G+ GP+ + G G+ G G PG+PG +PG
Sbjct: 468 GVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPP 527
Query: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPGAGI 356
G G+G P A K PG GP PG+ G PG PG P A +
Sbjct: 528 GFPGIGKPGVAGLHGPPGK-----------PGALGPQGQPGLPGPPGP--PGPPGPPAVM 574
Query: 357 PVVP---GAGIP--GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
P P G +P G + GV P A YGA+ G G P Y + A
Sbjct: 575 PPTPPPQGEYLPDMGLGIDGVKPPHA----------YGAKKGKNGG--PAYEMPA 617
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 144 bits (362), Expect = 4e-34
Identities = 215/705 (30%), Positives = 259/705 (36%), Gaps = 120/705 (17%)
Query: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLG 80
+P PG A P G PG + P G +GG G GP G P P G G +GL
Sbjct: 2151 NPGLPGERGMAGPEGKPG-LQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGP---SGLK 2206
Query: 81 AFPAVTFPGALVPG-GVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAV--VPQ 136
P T P PG G+ A GL G PG GL G +P +PG V +
Sbjct: 2207 GEPGETGP----PGRGLTGPTGA-------VGLPGPPGPSGLVGPQGSPGLPGQVGETGK 2255
Query: 137 PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG-AFAGIP 195
PGA PG+ G G +PG+ PG LPG P G +P G G A G+P
Sbjct: 2256 PGA---PGRDGASGKDGDRGSPGVPGS--PG---LPG-PVGPKGEPGPTGAPGQAVVGLP 2306
Query: 196 GVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV 255
G G PG G + P G GLP GP G G AG+AG P G
Sbjct: 2307 GAKGEKGA-PGGLAGDLVGEPGAKGDRGLP----------GPRGEKGEAGRAGEPGDPGE 2355
Query: 256 GPQAAAAAAAKAAAKFGAGAAGVL-----PGV-GGAGVPGVPGAIPGIGGIAG------- 302
Q A G G G PGV G G+PG+PGA PG+ G G
Sbjct: 2356 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGA-PGVVGFPGQTGPRGE 2414
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-------GVPGVGVPGA- 354
+G P + A + G L P GP PG VG PGA G PGVG+PG
Sbjct: 2415 MGQPGPSGERGLAGPPGREGIPGPLGPPGP---PGSVGPPGASGLKGDKGDPGVGLPGPR 2471
Query: 355 ---GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 411
G P + G PG P + G + VG G+ G G
Sbjct: 2472 GERGEPGIRGED----GRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLK-------GDKG 2520
Query: 412 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAA 471
+ G PG G G G G G+ G K + G P +K
Sbjct: 2521 DSAVILGPPGPRGAKGDMGERGPRGLDG------------DKGPRGDNGDPGDKGSKGEP 2568
Query: 472 KAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGV-GVAPGVGVAPGIGPGGVA 530
+PG+ G PG PG +PG PG+ G VG +GP G+
Sbjct: 2569 GDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGF---MGPRGLK 2625
Query: 531 AAAKSAAKVAAKAQLRAAAGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAV 588
+ ++ A GL G G G PGL AG G GVPG
Sbjct: 2626 G----------ERGVKGACGLDGEKGDKGEAGPPGRPGL---AGHKGEMGEPGVPGQSGA 2672
Query: 589 PG--ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGL 646
PG L K + PG G G G G PG GP+ +A G
Sbjct: 2673 PGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGP 2732
Query: 647 VGAAGLGGLGVGGLGVPG--VGGLGGIPPAAAAKAAKYGVAARPG 689
G GL G G G PG V G G+P A + G RPG
Sbjct: 2733 RGPEGLQG-QKGERGPPGERVVGAPGVPGAPGER----GEQGRPG 2772
Score = 140 bits (353), Expect = 4e-33
Identities = 216/727 (29%), Positives = 265/727 (36%), Gaps = 128/727 (17%)
Query: 26 PGGVPG--AIPG--GVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLG 80
P G PG + G G PG PG LG G G G G+P KP GL G G G
Sbjct: 1995 PIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEA 2054
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAG 140
P K + G G PG+ G P P V +PG G
Sbjct: 2055 GRPGER------------GERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPG 2102
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGP 199
+ + P GL G G + P G +PG+ G +P G G G+PG
Sbjct: 2103 LSGEQGPP-GLKGAKGEPGSNGDQGPKGDRGVPGIKGDRG-EPGPRGQDGN-PGLPGERG 2159
Query: 200 FGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQA 259
GP+ L P P GG+G P GP G G AG AG PQ
Sbjct: 2160 MAGPEGKPGLQGPRGPPGPVGGHGDP----------GPPGAPGLAGPAG--------PQG 2201
Query: 260 AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--------AIPGIGGIAG-VGTPAAAA 310
+ + + G G+ G G+PG PG PG+ G G G P A
Sbjct: 2202 PSGLKGEPG-ETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPG 2260
Query: 311 AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG---VGVPGA-GIPVVPG- 361
A+ K G+ VPG PG PG VG G G PG VG+PGA G PG
Sbjct: 2261 RDGASGKDGDRGSPG--VPGSPGL-PGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGG 2317
Query: 362 -----AGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF-GV 414
G PGA G+ P A +A + G G G P G GF G GV
Sbjct: 2318 LAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAP----GPKGFKGDPGV 2373
Query: 415 GVGGIPGVAGVPGVG---GVPGVGGVPGV--------------GISPEAQAAAAAKAAKY 457
GV G PG G PGV G+PG+ G PGV P + A +
Sbjct: 2374 GVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGRE 2433
Query: 458 GV-------GTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAP 510
G+ G P + A+ PGVG+ PG G G PG
Sbjct: 2434 GIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGL-PGPRGERGEPGIRGEDGRPGQEGPR 2492
Query: 511 GVGVAPGV----GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAG-LGA------------ 553
G+ PG G +G G+ +A + R A G +G
Sbjct: 2493 GLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGP 2552
Query: 554 ----GIPGLGVGVGVPGLGVGAGVPGL-GV--GAGVPGFGAVPGALAAAKAAKYGAAVPG 606
G PG G PG AG+PGL G+ G PG +PG K G VPG
Sbjct: 2553 RGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPG--DPGSPGKDG--VPG 2608
Query: 607 VLGGLGALGGVGIPGGVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGV 665
+ G G +G +G P G+ G G A + G G GL G G +G PGV
Sbjct: 2609 IRGEKGDVGFMG-PRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAG-HKGEMGEPGV 2666
Query: 666 GGLGGIP 672
G G P
Sbjct: 2667 PGQSGAP 2673
Score = 131 bits (330), Expect = 2e-30
Identities = 210/728 (28%), Positives = 244/728 (33%), Gaps = 133/728 (18%)
Query: 26 PGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFP 83
P G PG +PG G PG PG+ G G G+P P G G GL P
Sbjct: 1270 PPGDPG-LPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSP 1328
Query: 84 AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPG--VGGLGVSAAPSVPGAVVPQPGAGV 141
+PG D + + G G PG +GG G P +PG PG
Sbjct: 1329 G-------LPGPRGDPGE--RGPRGPKGEPGAPGQVIGGEG----PGLPGR-KGDPGPSG 1374
Query: 142 KPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK-PKAPGVGGAFAGIPGV-GP 199
PG +G PG LPG + G G + P PG GG G PG+ G
Sbjct: 1375 PPGPRGPLGDPGPRGPPGLPGT------AMKGDKGDRGERGPPGPGEGGIAPGEPGLPGL 1428
Query: 200 FGGPQPGVPLGYPIK----------APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGY 249
G P P P+G P K AP LPG G P G GP G G G G+
Sbjct: 1429 PGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGP----RGPPGAIGPKGDRGF 1484
Query: 250 PTGTG-------------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG---- 292
P G G + A + AK G G G G PG PG
Sbjct: 1485 PGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAV 1544
Query: 293 AIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPG-------FGP----GVVG 340
P + G G G A A + G ++PG PG GP G G
Sbjct: 1545 VGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAG 1604
Query: 341 VPG-AGVPG----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 395
PG +G PG G PG PV P G P KA + G R G
Sbjct: 1605 PPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPG 1664
Query: 396 VGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAA 455
V G P G G PG G G PG +G G G PG G PG + A +
Sbjct: 1665 VRG-PVGEKGDQGDPGED-GRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPG 1722
Query: 456 KYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGV-GVA----- 509
G P PG+ APG G PG PGV G A
Sbjct: 1723 DRGQEGPRGPKGD-----------PGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGD 1771
Query: 510 ---PGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVP 565
PG+ G+ PG GP G AA A G+PGL G+P
Sbjct: 1772 RGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRD-----------GLPGLRGEQGLP 1820
Query: 566 GLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVG 625
G G+PG G PG G PG G G G G G
Sbjct: 1821 GPSGPPGLPGKPGEDGKPGLNGKNGE----------PGDPGEDGRKGEKGDSGASGREGR 1870
Query: 626 AGPAAAAAAAKAAAKAAQFGLVGAAGLGGL----GVGGLGVPGVGGLGGIPPAAAAKAAK 681
GP A G++G G GL G G G PGV G G P +
Sbjct: 1871 DGPKGERGAP---------GILGPQGPPGLPGPVGPPGQGFPGVPG-GTGPKGDRGETGS 1920
Query: 682 YGVAARPG 689
G PG
Sbjct: 1921 KGEQGLPG 1928
Score = 124 bits (310), Expect = 4e-28
Identities = 216/767 (28%), Positives = 270/767 (35%), Gaps = 128/767 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P+ P G G P G+ PG G GP G + P G +G G
Sbjct: 1561 PAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGR 1620
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVPQPGAGV 141
P PG + P G D K + G G+PG G G+ AP V G V + G
Sbjct: 1621 PGP--PGPVGPRG-RDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQG- 1676
Query: 142 KPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG--VPTGAGVKPKA--------------- 184
PG+ G PG G PG PG V TG G + K
Sbjct: 1677 DPGEDGRNGSPG--SSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKG 1734
Query: 185 -PGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPK-------LPGGYGLPYTTGKLPYGY 235
PG+ GA G G+ F GP PG P G P ++ P PG G GK P
Sbjct: 1735 DPGLPGA-PGERGIEGFRGP-PG-PQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK-PGAA 1790
Query: 236 GPGGVAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGV 290
GP G GAAGKAG P G+ G Q + G G PG+ G G PG
Sbjct: 1791 GPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK-PGLNGKNGEPGD 1849
Query: 291 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV- 349
PG G G A+ + GA L P GP PG VG PG G PGV
Sbjct: 1850 PGED---GRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVP 1906
Query: 350 ------------------GVPG-AGIPVVPG-----------AGIPGAAVPGVVS----- 374
G+PG G+ PG AGI +A+ +V
Sbjct: 1907 GGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDES 1966
Query: 375 -------PEAAAKAAAKAAKYGARPGVGVGGIP--------TYGVGAGGFPGFGVGVGGI 419
PE + + G G G P G G PG +G G
Sbjct: 1967 SGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGP 2026
Query: 420 PGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLV 479
PG +G+ G G PG+ G+PG +A +A + G + +
Sbjct: 2027 PGPSGLAGEPGKPGIPGLPG-------RAGGVGEAGRPGERGERGEKGERGEQGRDG--P 2077
Query: 480 PGVGVAPGVGVAPGVGVA---PGVGLAPGVGVAPGVGVAPGVGVAPG----IGPGGVAAA 532
PG+ PG PG V+ PG GL+ G PG+ A G + G G GV
Sbjct: 2078 PGLPGTPGPPGPPGPKVSVDEPGPGLSGEQG-PPGLKGAKGEPGSNGDQGPKGDRGVPGI 2136
Query: 533 AKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 592
+ + Q GL G G+ G PGL G PG G G PG PG
Sbjct: 2137 KGDRGEPGPRGQ-DGNPGL-PGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLA 2194
Query: 593 AAA----------KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAA 642
A + + G G+ G GA+G G PG GP + +
Sbjct: 2195 GPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETG 2254
Query: 643 QFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
+ G G G G G G PGV G G+P K + G PG
Sbjct: 2255 KPGAPGRDGASGKD-GDRGSPGVPGSPGLPGPVGPK-GEPGPTGAPG 2299
Score = 121 bits (304), Expect = 2e-27
Identities = 199/697 (28%), Positives = 245/697 (35%), Gaps = 88/697 (12%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKP-VPGGLAGAGLGAGL 79
P PG G+PG+ PG P G P G G G G P +P PG G +
Sbjct: 1420 PGEPGLPGLPGS-PG--PQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAI 1476
Query: 80 GAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGA 139
G FPG L G + AG G+PGV G + P P + G
Sbjct: 1477 GPKGDRGFPGPLGEAG----EKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGE 1532
Query: 140 GVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGA-GVKPKAPGVGGAFAGIPGVG 198
+PG+ G P V G + G + V P P GA GV+ + G G P G
Sbjct: 1533 KGEPGR---PGDPAVV-GPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDP--G 1586
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGP 257
P G P P+G +A PG G P G P GP G G G+ G G GP
Sbjct: 1587 PKGDPGDRGPIGLTGRAGP-PGDSGPPGEKGD-PGRPGPPGPVGPRGRDGEVGEKGDEGP 1644
Query: 258 QAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAG----VGTPAA 308
KA + GA GV VG G G PG PG G G G P
Sbjct: 1645 PGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGP 1704
Query: 309 AA----AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG-AGIPVVPG 361
A + + G P GP PG+ G PG G+ G G PG G P V G
Sbjct: 1705 PGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRG 1764
Query: 362 -AGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGI 419
AG G PG+ A G G G P G G PG G G+
Sbjct: 1765 PAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDP----GRDGLPGLR-GEQGL 1819
Query: 420 PGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLV 479
PG +G PG+ G PG G PG+ + + + G + A+ + +
Sbjct: 1820 PGPSGPPGLPGKPGEDGKPGLN-GKNGEPGDPGEDGRKGEKGDSGASGREGRDGPK---- 1874
Query: 480 PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGG--VAAAAKSAA 537
G APG+ G PG PG G PGV PG G GP G +K
Sbjct: 1875 -GERGAPGILGPQGPPGLPGPVGPPGQGF-PGV---PG-----GTGPKGDRGETGSKGEQ 1924
Query: 538 KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKA 597
+ + LR G + L G+ + V +G F VP K
Sbjct: 1925 GLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSG--SFLPVPERRRGPKG 1982
Query: 598 AKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGV 657
PG G +G G G+ G GP G GL +
Sbjct: 1983 DSGEQGPPGKEGPIGFPGERGLKGDRGDPGP---------------------QGPPGLAL 2021
Query: 658 GGLGVPGVGGLGGIP-----PAAAAKAAKYGVAARPG 689
G G PG GL G P P +A G A RPG
Sbjct: 2022 GERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPG 2058
Score = 116 bits (290), Expect = 8e-26
Identities = 190/637 (29%), Positives = 224/637 (35%), Gaps = 115/637 (18%)
Query: 111 GLGGVPGVGG-LGVSAAPSVPGAVVPQ-----PGAGVKPGKVPGVGLPGVYPG--GVLPG 162
G G PG+ G G PG+ + PGA +PG G PG PG G+
Sbjct: 1269 GPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGT-PGAPGLKGS 1327
Query: 163 ARFPGVGVLPGV--PTGAGVKPKAPG--VGGAFAGIPG----VGPFGGPQPGVPLGYPIK 214
PG PG P G +P APG +GG G+PG GP G P P PLG P
Sbjct: 1328 PGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDP-- 1385
Query: 215 APKLPGGYGLPYTTGKL---------PYGYGPGGVA-GAAGKAGYPTGTGVGPQAAAAAA 264
P+ P G LP T K P G G GG+A G G G P G PQ
Sbjct: 1386 GPRGPPG--LPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPG--PQGPVGPP 1441
Query: 265 AKAAAKFGA--GAAGVLPG----------------VGGAGVPGVPGAIPGIGGIAGVGTP 306
K K + GA G LPG +G G G PG + G G P
Sbjct: 1442 GKKGEKGDSEDGAPG-LPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPG 366
A + A + GA P GP G G PG G P V G + G
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGR---------PGDPAVVGPAVAG 1551
Query: 367 -AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG----FGV-GVGGIP 420
G V P A + G PG+ + G P G G PG G+ G G P
Sbjct: 1552 PKGEKGDVGPAGPRGATGVQGERGP-PGLVLPGDP----GPKGDPGDRGPIGLTGRAGPP 1606
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
G +G PG G PG G PG + P + + G KA +
Sbjct: 1607 GDSGPPGEKGDPGRPGPPG-PVGPRGRDGEVGEKGDEGPPGDPGLPGKAGER-------- 1657
Query: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKV 539
G+ APGV G G G +PG G PG GP G A+
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAR- 1716
Query: 540 AAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 599
G PG G G G+PG G+ GF PG
Sbjct: 1717 ------------EKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGP-------- 1756
Query: 600 YGAAVPGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 654
PGV G G G G PG G+ G AA + AA A G G GL G
Sbjct: 1757 --QGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKA--GDPGRDGLPG 1812
Query: 655 LGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 689
L G G+PG G G+P P K G PG
Sbjct: 1813 LR-GEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPG 1848
Score = 101 bits (251), Expect = 3e-21
Identities = 151/510 (29%), Positives = 175/510 (34%), Gaps = 80/510 (15%)
Query: 232 PYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGV 290
P G G G G G P TG GPQ +A + GA G G AG PG
Sbjct: 1259 PGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGT 1318
Query: 291 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG-PGVVGVPG-AGVPG 348
PGA PG+ G G+ P A G V GG G G PG G PG +G PG
Sbjct: 1319 PGA-PGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPG 1377
Query: 349 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
+G PG P G+PG A+ G PG G GGI
Sbjct: 1378 PRGPLGDPGPRGP----PGLPGTAMKGDKGDRGER----------GPPGPGEGGIAPGEP 1423
Query: 405 GAGGFPGF----------------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQA 448
G G PG G G PG+ G PG G G G PG I P+
Sbjct: 1424 GLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPG-AIGPKGDR 1482
Query: 449 AAAAKAAKYGV----GTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAP 504
+ G G P A ++ +PGV PG A G PG
Sbjct: 1483 GFPGPLGEAGEKGERGPPGPAGSRG---------LPGVAGRPG---AKGPEGPPGPTGRQ 1530
Query: 505 GVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 563
G PG P V V P + GP G A A G +PG G
Sbjct: 1531 GEKGEPGRPGDPAV-VGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKG 1589
Query: 564 VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGV 623
PG G GL AG PG PG PG G G +G G G V
Sbjct: 1590 DPG---DRGPIGLTGRAGPPGDSGPPGE----------KGDPGRPGPPGPVGPRGRDGEV 1636
Query: 624 VGAGPAAAAAAAKAAAKAAQFGLVGAAGL-GGLG-VGGLGVPGVGGLGGIPPAAAAKAAK 681
G KA + GL GA G+ G +G G G PG G G P ++ K
Sbjct: 1637 GEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPK--- 1693
Query: 682 YGVAARPGFGLSPIFPGGACLGKACGRKRK 711
G PG P P G + G + K
Sbjct: 1694 -GDRGEPG----PPGPPGRLVDTGPGAREK 1718
Score = 91.7 bits (226), Expect = 2e-18
Identities = 155/545 (28%), Positives = 184/545 (33%), Gaps = 168/545 (30%)
Query: 23 PSRPG--GVPGAI-PGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGL 79
P PG G+PG + P G PG PG + L PG K K PGGLAG +G
Sbjct: 2274 PGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGL------PGAKGEKGAPGGLAGDLVGE-- 2325
Query: 80 GAFPAVTFPGAL----VPGGVADAAAAYKAAKAGA----GLGGVPGVGGLGVSAAPSVPG 131
PGA +PG + A +A + G G G PG G VPG
Sbjct: 2326 --------PGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPG 2377
Query: 132 AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG-- 189
+ PG PG +GLPG LPGA PGV PG TG + PG G
Sbjct: 2378 S----PGPPGPPGVKGDLGLPG------LPGA--PGVVGFPG-QTGPRGEMGQPGPSGER 2424
Query: 190 AFAGIPG----VGPFGGPQPGVPLGYP----IKAPKLPGGYGLPYTTGKL---------- 231
AG PG GP G P P +G P +K K G GLP G+
Sbjct: 2425 GLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDG 2484
Query: 232 -PYGYGPGGVAGAAGKAGYPTGTG-----------------VGPQAAAAAAAKAAAKFGA 273
P GP G+ G G G G +GP A +
Sbjct: 2485 RPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPR 2544
Query: 274 GAAGVLPGVGGAGVPGVPGA-----------IPGIGGIAGV-GTPAAAAAAAAAAKAAKY 321
G G G G PG G+ +PG+ G+ G G P AA K
Sbjct: 2545 GLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKD 2604
Query: 322 GAAAGLVPG-----------GPGFGPGVVGVPGA-GVPG-------VGVPGA-------- 354
G VPG GP G GV GA G+ G G PG
Sbjct: 2605 G-----VPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKG 2659
Query: 355 --GIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 411
G P VPG +G PG G++ P+ + G + G G P G GGFPG
Sbjct: 2660 EMGEPGVPGQSGAPGKE--GLIGPKGDRGFDGQPGPKGDQGEKGERGTP----GIGGFPG 2713
Query: 412 FG-------------------------------------VGVGGIPGVAGVPGVGGVPGV 434
VG G+PG G G G PG
Sbjct: 2714 PSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGP 2773
Query: 435 GGVPG 439
G G
Sbjct: 2774 AGPRG 2778
Score = 68.9 bits (167), Expect = 2e-11
Identities = 92/309 (29%), Positives = 113/309 (36%), Gaps = 31/309 (10%)
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAA 474
G G PG G+ G G PG G+PG +P Q + AK G P A + A
Sbjct: 1254 GQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRA 1313
Query: 475 QFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV--GVAPGIGPG--GVA 530
PG APG+ +PG+ PG PG G PG V G GPG G
Sbjct: 1314 G---NPGTPGAPGLKGSPGL---PGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRK 1367
Query: 531 AAAKSAAKVAAKAQLRAAAGLG-AGIPGLGV--------GVGVPGLGVGA------GVPG 575
+ + L G G+PG + G PG G G G+PG
Sbjct: 1368 GDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPG 1427
Query: 576 LGVGAGVPGFGAVPGALAAAKAAKYGA-AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAA 634
L G G PG ++ GA +PG G G G G PG + G
Sbjct: 1428 LPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGP 1487
Query: 635 AKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSP 694
A + + G G AG GL G G PG G G PP + + G RPG P
Sbjct: 1488 LGEAGEKGERGPPGPAGSRGL-PGVAGRPGAKGPEG-PPGPTGRQGEKGEPGRPG---DP 1542
Query: 695 IFPGGACLG 703
G A G
Sbjct: 1543 AVVGPAVAG 1551
>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
Length = 1714
Score = 143 bits (361), Expect = 5e-34
Identities = 207/717 (28%), Positives = 258/717 (35%), Gaps = 113/717 (15%)
Query: 23 PSRPGGVPGAI----PGGVPGGVFYPGA-GLGALGGGALGPGGKPLKPVPGGLAGAGLGA 77
P P G+PG P G+PG PG GL G PG P +PVPG GL
Sbjct: 499 PPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSG 558
Query: 78 -----------GLGAFPAVT-FPGAL-VPGGVAD-AAAAYKAAKAGAGLGGVPG-VGGLG 122
GL P + PG +PG + + Y + AG G PG G G
Sbjct: 559 LMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQG 618
Query: 123 VSAAPSVPGAVVPQ-----PGAGVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPT 176
+P G + P+ PG K G G PG + G R P G+ PG+
Sbjct: 619 FIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDF------GDRGPAGLDGSPGLVG 672
Query: 177 GAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYG 236
G G P PG+ G+ + +GP G P P+G L G GLP G G
Sbjct: 673 GTG-PPGFPGLRGSVGPVGPIGPAGIPG---PMG-------LSGNKGLPGIKG----DKG 717
Query: 237 PGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--A 293
G AG G+ GYP G VG K+ G G+ G G G PG
Sbjct: 718 EQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIG 777
Query: 294 IPGIGGIAGV-------GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AG 345
IPG G G G P + GA L P G G G PG G
Sbjct: 778 IPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEG 837
Query: 346 VPG-VGVPG--AGIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
+ G VG G I G+PG + G + + + G + +G G P
Sbjct: 838 LKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPG 897
Query: 402 Y--GVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAK--Y 457
+G G PG VG G PG G G G G G+ G Q AK K
Sbjct: 898 VPGPIGPLGLPGH-VGARGPPGSQGPKGQRGSRGPDGLLG------EQGIQGAKGEKGDQ 950
Query: 458 GVGTPAAAAAKAAAKAAQ-FGLVPGVGVAPGVGVAPGVGVAPGV-GLAPGVGVAPGVGVA 515
G P K + F PG+ PG G+ PG+ GL VG +G+
Sbjct: 951 GKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGME 1010
Query: 516 PGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPG 575
GP G + + AK + A +G G G PGL G PG
Sbjct: 1011 ---------GPPGTEGESGLQGEPGAKGDVGTAGSVG--------GTGEPGLRGEPGAPG 1053
Query: 576 LGVGAGVPGFGAVPG--ALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVG------ 625
G G VPG L K +PG++G LG G G+PG G+VG
Sbjct: 1054 EEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRG 1113
Query: 626 ----------AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 672
GP + K + G GA G G VG LG+ G G GIP
Sbjct: 1114 RPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRG-AVGHLGLMGPDGEPGIP 1169
Score = 116 bits (290), Expect = 8e-26
Identities = 206/715 (28%), Positives = 254/715 (35%), Gaps = 127/715 (17%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGA-GLGAGLGAFPA 84
P G PG P G PG + PG G LG G P P GL G G +GAF
Sbjct: 763 PSGPPG--PEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPP---GLKGTQGEEGPIGAFGE 817
Query: 85 VT---------FPGALVPGG----VADAAAAYKAAKAG-AGLGGVPGV-GGLGVSAAPSV 129
+ + G P G V D K + G GL G G+ G +G
Sbjct: 818 LGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGS 877
Query: 130 PGAVVPQ--------PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK 181
PG + PQ PG PG + +GLPG PG++ P P G +
Sbjct: 878 PGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGE 937
Query: 182 PKAPGVGGAFAGIPGVGPFG----GPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGY 235
G G GP G PG G+ K PG GLP +TG LP
Sbjct: 938 QGIQGAKGEKGDQGKRGPHGLIGKTGNPG-ERGFQGK----PGLQGLPGSTGDRGLP--- 989
Query: 236 GPGGVAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVP 291
G G+ G G G P G+ G + + + AK G AG + G G G+ G P
Sbjct: 990 GEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEP 1049
Query: 292 GAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGV- 349
GA PG G+ G K G VPGG G PG G G G+PG+
Sbjct: 1050 GA-PGEEGLQG-----------------KDGLKG--VPGGRGL-PGEDGEKGEMGLPGII 1088
Query: 350 ---------GVPGA-GIPVVPGA-GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVG 397
G+PG GI +PG G PG G + P + K G G
Sbjct: 1089 GPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGAR 1148
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G GA G G +G G PG+ G G G PG G+PG K K
Sbjct: 1149 GTR----GAVGHLGL-MGPDGEPGIPGYRGHQGQPGPSGLPG------------PKGEKG 1191
Query: 458 GVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGV-GLAPGVGVAPGVGVAP 516
G + PG PG G PG G VGV PG+ A
Sbjct: 1192 YPGEDSTVLGP-----------PGPRGEPGPVGDQGERGEPGAEGYKGHVGV-PGLRGAT 1239
Query: 517 GVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPG 575
G PG PG + K + + G G PG G+PGL G G
Sbjct: 1240 GQQGPPG-EPG-------DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKG 1291
Query: 576 LGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAA 635
+ G G PG + K G +PG+ GG G G G PG G + +
Sbjct: 1292 IQGYHGADGISGNPGKIGPP--GKQG--LPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSP 1347
Query: 636 KAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGF 690
+ GL G G+ G G G G G G P + +YGV GF
Sbjct: 1348 GIQGPKGEQGLPGQPGIQGKR-GHRGAQGDQGPCG-DPGLKGQPGEYGVQGLTGF 1400
Score = 98.2 bits (243), Expect = 2e-20
Identities = 186/634 (29%), Positives = 221/634 (34%), Gaps = 75/634 (11%)
Query: 26 PGGVPGAI-PGGVPG-----------------GVFYPGAGLGALG-GGALGPGGKPLKPV 66
P GVPG I P G+PG G P LG G GA G G K
Sbjct: 895 PPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRG 954
Query: 67 PGGLAGAGLGAGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSA 125
P GL G G F PG +PG D + G G V G +G+
Sbjct: 955 PHGLIGKTGNPGERGFQGK--PGLQGLPGSTGDRGLPGEPGLRGLQ-GDVGPPGEMGMEG 1011
Query: 126 APSVPGAVVPQPGAGVK-----PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAG 179
P G Q G K G V G G PG+ PG G L GVP G G
Sbjct: 1012 PPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRG 1071
Query: 180 VKPKAPGVGGAFAGIPGV-GPFG-GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
+ P G G G+PG+ GP G Q G+P P +PG G P
Sbjct: 1072 L-PGEDGEKGEM-GLPGIIGPLGRSGQTGLP--GPEGIVGIPGQRGRP------------ 1115
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G G+ G PTG VG + K+ K G G + +G G G PG IPG
Sbjct: 1116 -GKKGDKGQIG-PTGE-VGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPG-IPGY 1171
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGV-GVPG-A 354
G G P+ K + L P GP PG VG G G PG G G
Sbjct: 1172 RGHQGQPGPSGLPGPKGE-KGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHV 1230
Query: 355 GIPVVPGA----GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG--VGAG 407
G+P + GA G PG G + + K GA G GIP +G
Sbjct: 1231 GVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPK 1290
Query: 408 GFPGF--GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAA 465
G G+ G+ G PG G PG G+PG+ G PG A K + G+P
Sbjct: 1291 GIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQ 1350
Query: 466 AAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG-VGVAPGVGVAPGI 524
K + GL PG G G G PG+ PG GV G
Sbjct: 1351 GPK-----GEQGL-PGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFP 1404
Query: 525 GPGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIPGLGVGVGVPGLGVGAGVPGLGVGA 580
GP G A K + G GI G G G G G
Sbjct: 1405 GPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRGETGPQGPR 1464
Query: 581 GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGAL 614
G PG PGA K AA+ ++ AL
Sbjct: 1465 GQPGPPGPPGAPGPRKQMDINAAIQALIESNTAL 1498
Score = 75.5 bits (184), Expect = 2e-13
Identities = 125/497 (25%), Positives = 168/497 (33%), Gaps = 98/497 (19%)
Query: 230 KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPG 289
++ Y GP G G G G P G GP G G+ G G+PG
Sbjct: 483 EMEYLRGPKGDTGPPGPPG-PAGIP-GPSGKR------------GPRGIPGPHGNPGLPG 528
Query: 290 VPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG 348
+PG G P + + G + + P G G+ G PG G+PG
Sbjct: 529 LPGP------KGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPG 582
Query: 349 -VGVPG----AGIPVVPG-------------------AGIPGAA----------VPGVVS 374
G+PG G P PG G PG A +PG+
Sbjct: 583 EQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRG 642
Query: 375 PEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPGF--GVGVGGIPGVAGVPGVGG 430
+ +G R G+ G P G G GFPG VG G G AG+PG G
Sbjct: 643 KKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMG 702
Query: 431 VPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGV 490
+ G G+PG+ Q A +G P K A G+ PG+
Sbjct: 703 LSGNKGLPGIKGDKGEQGTAGE------LGEPGYPGDKGAV---------GLPGPPGMRG 747
Query: 491 APGVGVAPGVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 549
G G G PG PG +G+ GP G +
Sbjct: 748 KSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGP----------- 796
Query: 550 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 609
G PGL G G G G G G+ PG + K G +G
Sbjct: 797 ---PGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPG----PEGLKGEVGDQGNIG 849
Query: 610 GLGALGGVGIPG--GVVGA-GPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPG 664
+G G VG+PG G+ G+ G + + G++G G G+ +G LG+PG
Sbjct: 850 KIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPG 909
Query: 665 VGGLGGIPPAAAAKAAK 681
G G P + K +
Sbjct: 910 HVGARGPPGSQGPKGQR 926
Score = 66.6 bits (161), Expect = 7e-11
Identities = 79/287 (27%), Positives = 103/287 (35%), Gaps = 24/287 (8%)
Query: 410 PGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKA 469
P G G PG AG+PG G G G+PG +P K K G P + +
Sbjct: 490 PKGDTGPPGPPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPK---GDPGFSPGQP 546
Query: 470 AAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGV 529
+ G+ PG+ G+ PG+ PG P G A +G G G+
Sbjct: 547 VPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIP--GFAGNIGSPGYPGRQGL 604
Query: 530 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 589
A + A+ + G PG +G G G+PG+ G G P
Sbjct: 605 AGPEGNPGPKGAQGFI--------GSPGEAGQLGPEG---ERGIPGIRGKKGFKGRQGFP 653
Query: 590 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGA 649
G A + PG++GG G G G+ G V GP A + GL G
Sbjct: 654 GDFGDRGPAGLDGS-PGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGI 712
Query: 650 AG-LGGLGVGG-LGVPGVGGLGGI-----PPAAAAKAAKYGVAARPG 689
G G G G LG PG G G PP K+ G PG
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPG 759
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 141 bits (356), Expect = 2e-33
Identities = 224/762 (29%), Positives = 264/762 (34%), Gaps = 139/762 (18%)
Query: 25 RPG--GVPGAIPG-GVPGGVFYPGA-------GLGALGG-----GALGPGGKPLKPVPGG 69
+PG G PGA G G+PG PGA GL L G G GP G P P G
Sbjct: 587 KPGKRGRPGADGGRGMPGE---PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDG 643
Query: 70 LAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPS 128
+ G G P P L+ G G PG G+ GV P
Sbjct: 644 MRGEDGEIGPRGLPGEAGPRGLL---------------GPRGTPGAPGQPGMAGVDGPPG 688
Query: 129 VPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVL--PGARFP-GVGVLPGVPTGAGVKPK 183
G + PQ PG + G GLPG P G + PG + P G L G+P GA P
Sbjct: 689 PKGNMGPQGEPGPPGQQGNPGPQGLPG--PQGPIGPPGEKGPQGKPGLAGLP-GADGPPG 745
Query: 184 APGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPK----LPGGYGLPYTTGK-----LPYG 234
PG G +GP P P P+GYP P+ G GL + G+ P
Sbjct: 746 HPGKEGQSGEKGALGP---PGPQGPIGYP--GPRGVKGADGVRGLKGSKGEKGEDGFPGF 800
Query: 235 YGPGGVAGAAGKAGY--PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
G G+ G G+ G P G GP+ A +G AG +G G+PG PG
Sbjct: 801 KGDMGLKGDRGEVGQIGPRGED-GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPG 859
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-------------------- 332
G G P A A A K G P GP
Sbjct: 860 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSG 919
Query: 333 GFGP-------------GVVGVPGAGVPGVGVPGA-GIPVVPG----AGIPGAAVP---- 370
G GP G VG PG P G PG G+P PG G G P
Sbjct: 920 GDGPPGPPGERGPQGPQGPVGFPGPKGP-PGPPGKDGLPGHPGQRGETGFQGKTGPPGPG 978
Query: 371 GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--VGVGGIPGVAGVPGV 428
GVV P+ + G R G G P G G PG G G PG G+ G
Sbjct: 979 GVVGPQG---PTGETGPIGERGHPGPPGPP----GEQGLPGAAGKEGAKGDPGPQGISGK 1031
Query: 429 GGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGV 488
G G+ G PG P AQ A K + G P + +A G+ PG
Sbjct: 1032 DGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGP 1091
Query: 489 GVAPGVGVAPGVGLAPG----VGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 544
PG G APG G A GV VG+ GP G ++ Q
Sbjct: 1092 QGPPGPAGEKG---APGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQ 1148
Query: 545 LRAAAGLG----AGIPGLGVGVGVPGLGVGAGVPG----LGV-----GAGVPGFGAVPGA 591
+ G G PGL VG PG+ G G PG G+ G GF PG
Sbjct: 1149 KGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGP 1208
Query: 592 LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 651
+ PG G G +G +G PG GP A G VG G
Sbjct: 1209 IGLQGL----PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1264
Query: 652 LGGL--GVGGLGVPGVGGLGGIPPAAAAK--AAKYGVAARPG 689
G G G PG G+GG K A G A PG
Sbjct: 1265 EKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPG 1306
Score = 136 bits (342), Expect = 8e-32
Identities = 245/857 (28%), Positives = 280/857 (32%), Gaps = 228/857 (26%)
Query: 23 PSRPGGVPGAI-PGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGA 81
P P G PG P G PG PGA GP G P K G GA LG G
Sbjct: 716 PQGPIGPPGEKGPQGKPGLAGLPGAD---------GPPGHPGKEGQSGEKGA-LGPP-GP 764
Query: 82 FPAVTFPGALVPGGV--ADAAAAYKAAKAGAGLGGVPGV-GGLGVSAAPSVPGAVVPQ-- 136
+ +PG P GV AD K +K G G PG G +G+ G + P+
Sbjct: 765 QGPIGYPG---PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGE 821
Query: 137 ---------------PGAGVKPGKVPGVGLPGV--YPG--GVLPGARFPGVGVLPGVPTG 177
PG + G+ +G+PG+ YPG G FPG G
Sbjct: 822 DGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGA 881
Query: 178 AGVKPKA-----------------------PGVGGAFAGIPGVGPFG--GPQ-PGVPLGY 211
GV K PG G G GP G GPQ P P+G+
Sbjct: 882 RGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGF 941
Query: 212 PIKA--PKLPGGYGLPYTTGKL-------------PYGY----GPGGVAGAAGKAGYPTG 252
P P PG GLP G+ P G GP G G G+ G+P
Sbjct: 942 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGP 1001
Query: 253 TGV-GPQAAAAAAAKAAAKFGAGAAGV-----------------LPGV-------GGAGV 287
G G Q AA K AK G G+ LPG GG G
Sbjct: 1002 PGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGP 1061
Query: 288 PGVPGAI--PGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGV--- 338
G PG + PG G AG +G P A + GA P GP GV
Sbjct: 1062 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGP 1121
Query: 339 VGVPG----AGVPG-------VGVPGA----------GIPVVPG----AGIPG-AAVPGV 372
VG+PG AG PG +G PG G P PG G PG A G
Sbjct: 1122 VGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE 1181
Query: 373 VSPEAAAKAAAKAAKYGAR-----PG-VGVGGIP--------TYGVGAGGFPG------- 411
P + GAR PG +G+ G+P VG G PG
Sbjct: 1182 PGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGP 1241
Query: 412 -------------------FGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEA--QAA 449
GVG G PG AG PG G GVGG G G EA A
Sbjct: 1242 QGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGA 1301
Query: 450 AAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVA 509
A AK G P K F PG PG GVG G PG
Sbjct: 1302 AGPPGAK---GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGP 1358
Query: 510 PGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA--------------- 553
PG G PG GP G A A + AK + A G
Sbjct: 1359 PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGP 1418
Query: 554 ----GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--------------AA 595
GIPG G+PG G PG G+PG PG+
Sbjct: 1419 EGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGE 1478
Query: 596 KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL 655
+ K +PG G GA G GIPG GP G G AG
Sbjct: 1479 QGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG---- 1534
Query: 656 GVGGLGVPGVGGLGGIP 672
G G+PG G G P
Sbjct: 1535 QKGDSGLPGPPGSPGPP 1551
Score = 132 bits (332), Expect = 1e-30
Identities = 199/656 (30%), Positives = 226/656 (34%), Gaps = 88/656 (13%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGL 79
HP + G G G PGGV P G G +G G P P P G GL
Sbjct: 959 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--PIGERGHPGPPGPPG--EQGLPGAA 1014
Query: 80 GAFPAVTFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQP 137
G A PG P G++ D A + GL G G GL P P V P
Sbjct: 1015 GKEGAKGDPG---PQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1071
Query: 138 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV 197
G G +GLPG PG + P PG P G P G G AG GV
Sbjct: 1072 GERGSAGTAGPIGLPG------RPGPQGP-----PG-PAGEKGAPGEKGPQGP-AGRDGV 1118
Query: 198 -GPFGGPQPGVPLGYP--------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
GP G P P P G P I P G G G GP G+ G G G
Sbjct: 1119 QGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP----GPPGLQGPVGAPG 1174
Query: 249 YPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G G GP+ + + G G +G G+PG PG G + +G P
Sbjct: 1175 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1234
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIP 365
G P GP PG VG G GV G PG AG P PG AG+
Sbjct: 1235 PPGPRGPQGPNGADG------PQGP---PGSVGSVG-GVGEKGEPGEAGNPGPPGEAGVG 1284
Query: 366 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
G G + A A GA+ G G P G GFPG G G PG AG
Sbjct: 1285 GPK--GERGEKGEAGPPGAAGPPGAKGPPGDDG-PKGNPGPVGFPG-DPGPPGEPGPAGQ 1340
Query: 426 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAA------KAAAKAAQFGLV 479
GVGG G G PG P A G P AA A K A A
Sbjct: 1341 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGP 1400
Query: 480 PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAK 538
PG G G G+ PG G+ A G PG +GP G+
Sbjct: 1401 PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGS 1460
Query: 539 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 598
K G PGL +G PG G GL G PG A
Sbjct: 1461 KGEK-----------GHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG-------------A 1496
Query: 599 KYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 654
K +PG G LG G G+PG GP + A + GL G G G
Sbjct: 1497 KGDGGIPGPAGPLGPPGPPGLPG---PQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1549
Score = 110 bits (274), Expect = 6e-24
Identities = 205/729 (28%), Positives = 249/729 (34%), Gaps = 131/729 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P+ P G+ G P G+ G PG G GP G+P P GL G G
Sbjct: 458 PAGPAGIMG--PPGLQGPTGPPG------DPGDRGPPGRPGLPGADGLPGP---PGTMLM 506
Query: 83 PAVTFPGALVPGGVADAAAAYKAA---KAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGA 139
+ G G A A A +A L G PG GL
Sbjct: 507 LPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG---------------- 550
Query: 140 GVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
+PG V G G G PG + P GV PG PTG K PG G G+PG
Sbjct: 551 --RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGG-RGMPGEP 606
Query: 199 PFGGPQ-----PGVP--LGY-----PIKAPKLPGGYGLPYTTGK-----LPYGYGPGGVA 241
G + PG+P G+ P P PG G+ G+ LP GP G+
Sbjct: 607 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL 666
Query: 242 GAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIG 298
G G G P G+ G + G G G G+PG G I PG
Sbjct: 667 GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEK 726
Query: 299 GIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGP----GFGPGVVGVPGA-GVPGV 349
G G G P A K + G L P GP G+ PG GV GA GV G+
Sbjct: 727 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGY-PGPRGVKGADGVRGL 785
Query: 350 ----------GVPG--AGIPVVPGAGIPGAAVP-GVVSPEAAAKAA------AKAAKYGA 390
G PG + + G G P G PE A + + G
Sbjct: 786 KGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGE 845
Query: 391 RPGVGVGGIPTY-----GVGAGGFPGF--GVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
+ +GV G+P Y G+ GFPGF G G GVAG PG G G G G +
Sbjct: 846 KGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGA 905
Query: 444 PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPG---- 499
K G G P + PG PG G+ PG
Sbjct: 906 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGE 965
Query: 500 VGL-----APGVGVAPG----VGVAPGVGVAPGIGPGG-------VAAAAKSAAKVAAKA 543
G PG G G G +G GP G AA K AK
Sbjct: 966 TGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP 1025
Query: 544 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA 603
Q + AG+ G G+PG G PGL G G G PG + +
Sbjct: 1026 QGISGKDGPAGLRGFPGERGLPG---AQGAPGLKGGEGPQG---PPGPVGS--------- 1070
Query: 604 VPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 663
PG G G G +G+PG GP A A + G G G+ G +G+P
Sbjct: 1071 -PGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGV----QGPVGLP 1125
Query: 664 GVGGLGGIP 672
G G G P
Sbjct: 1126 GPAGPAGSP 1134
Score = 92.0 bits (227), Expect = 2e-18
Identities = 162/522 (31%), Positives = 181/522 (34%), Gaps = 120/522 (22%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
PG G P G PG V PG A G GP G P +P P G G G
Sbjct: 1053 PGLKGGEGPQGPPGPVGSPGERGSA---GTAGPIGLPGRPGPQGPPGPAGEKGA------ 1103
Query: 86 TFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVP--QPGAG 140
PG P G A D AG G PG G G P G+ + G
Sbjct: 1104 --PGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1161
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP----------GVGVLPGVPTGAGVK--PKAPGVG 188
PG VG PG+ G PG R G PG P G++ P PG
Sbjct: 1162 GPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEK 1221
Query: 189 GAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G + +GP G P P P G P A G G P + G + G G G G AG G
Sbjct: 1222 GENGDVGPMGPPGPPGPRGPQG-PNGAD---GPQGPPGSVGSVG-GVGEKGEPGEAGNPG 1276
Query: 249 YPTGTGVG--------------PQAAAAAAAKA-----AAKFGAGAAGV----------- 278
P GVG P AA AK K G G
Sbjct: 1277 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPG 1336
Query: 279 ---LPGVGGA----GVPGVPGAIPGIGGIAGVGTP--------AAAAAAAAAAKAAKYGA 323
GVGG G PG PG PG G AG P AA A K AK A
Sbjct: 1337 PAGQDGVGGDKGEDGDPGQPGP-PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEA 1395
Query: 324 AAGLVPGGPG-FGP-GVVGVPGA----GVPGV----GVPGA----------GIPVVPGA- 362
A PG G GP G G PG G+PG G+PGA G P +PG
Sbjct: 1396 GAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLK 1455
Query: 363 GIPGA-------AVPGVVSP--EAAAKAAAKAAKYGARPGV-GVGGIPTYG--VGAGGFP 410
G PG+ + G++ P E K PG G GGIP +G G P
Sbjct: 1456 GDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPP 1515
Query: 411 GF--------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G G G G G G+ G PG G PG I P
Sbjct: 1516 GLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQP 1557
Score = 89.0 bits (219), Expect = 1e-17
Identities = 146/519 (28%), Positives = 177/519 (34%), Gaps = 95/519 (18%)
Query: 182 PKAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK---LPYGYGP 237
P P G PG+ GP G P G P + P LPG GLP G LP+ YG
Sbjct: 455 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFRYGG 513
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G PT + Q A A A A+ + G PG +
Sbjct: 514 DGSKG-------PT---ISAQEAQAQAILQQARIA--------------LRGPPGPMGLT 549
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIP 357
G VG P ++ A + G P GP PG G PGA G G+P
Sbjct: 550 GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGAD------GGRGMP 603
Query: 358 VVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG 413
PGA G G +PG+ + G G+ G +G G PG
Sbjct: 604 GEPGAKGDRGFDG--LPGLPGDKGHRGERGPQGPPGPPGDDGMRG-EDGEIGPRGLPG-E 659
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKA 473
G G+ G G PG G PG+ GV G K G P
Sbjct: 660 AGPRGLLGPRGTPGAPGQPGMAGVDG---------PPGPKGNMGPQGEPGP--------- 701
Query: 474 AQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 533
PG PG PG G G PG+ PG PG PG +
Sbjct: 702 ------PGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG-HPGKEGQSG 754
Query: 534 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG-LGV-GA-GVPGLGVGAGVPGFGAVPG 590
+ A G PG +G PG GV GA GV GL G G PG
Sbjct: 755 EKGA---------------LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPG 799
Query: 591 ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAA 650
K + G G +G +G G G G A + +A + G +G
Sbjct: 800 -------FKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP 852
Query: 651 GLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
GL G G G G G G P A K A+ GVA +PG
Sbjct: 853 GLPGY-PGRQGPKGSTGFPGFPGANGEKGAR-GVAGKPG 889
Score = 64.3 bits (155), Expect = 4e-10
Identities = 92/316 (29%), Positives = 108/316 (34%), Gaps = 24/316 (7%)
Query: 392 PGVGVGGIPTYGVGAG--GFPGFG--VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQ 447
PG+ V G P AG G PG G G PG G PG G+PG G+PG P
Sbjct: 448 PGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPG---PPGTM 504
Query: 448 AAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVG 507
+ G P +A +A A+A + PG G+ PG PG
Sbjct: 505 LMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPG---PMGLTGRPGPVGGPGSS 561
Query: 508 VAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL 567
A G PG GP GV K + R A G G+PG G G
Sbjct: 562 GAKGESGDPGPQ-----GPRGVQGPPGPTGKPGKRG--RPGADGGRGMPGEPGAKGDRGF 614
Query: 568 GVGAGVPGLGVGAGVPGFGAVPG-----ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGG 622
G+PG G G PG + +PG G G LG G PG
Sbjct: 615 DGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGA 674
Query: 623 VVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKY 682
G A G G G G G G+PG G G PP K
Sbjct: 675 PGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQG-NPGPQGLPGPQGPIG-PPGEKGPQGKP 732
Query: 683 GVAARPGFGLSPIFPG 698
G+A PG P PG
Sbjct: 733 GLAGLPGADGPPGHPG 748
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 141 bits (356), Expect = 2e-33
Identities = 224/762 (29%), Positives = 264/762 (34%), Gaps = 139/762 (18%)
Query: 25 RPG--GVPGAIPG-GVPGGVFYPGA-------GLGALGG-----GALGPGGKPLKPVPGG 69
+PG G PGA G G+PG PGA GL L G G GP G P P G
Sbjct: 536 KPGKRGRPGADGGRGMPGE---PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDG 592
Query: 70 LAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPS 128
+ G G P P L+ G G PG G+ GV P
Sbjct: 593 MRGEDGEIGPRGLPGEAGPRGLL---------------GPRGTPGAPGQPGMAGVDGPPG 637
Query: 129 VPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVL--PGARFP-GVGVLPGVPTGAGVKPK 183
G + PQ PG + G GLPG P G + PG + P G L G+P GA P
Sbjct: 638 PKGNMGPQGEPGPPGQQGNPGPQGLPG--PQGPIGPPGEKGPQGKPGLAGLP-GADGPPG 694
Query: 184 APGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPK----LPGGYGLPYTTGK-----LPYG 234
PG G +GP P P P+GYP P+ G GL + G+ P
Sbjct: 695 HPGKEGQSGEKGALGP---PGPQGPIGYP--GPRGVKGADGVRGLKGSKGEKGEDGFPGF 749
Query: 235 YGPGGVAGAAGKAGY--PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
G G+ G G+ G P G GP+ A +G AG +G G+PG PG
Sbjct: 750 KGDMGLKGDRGEVGQIGPRGED-GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPG 808
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-------------------- 332
G G P A A A K G P GP
Sbjct: 809 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSG 868
Query: 333 GFGP-------------GVVGVPGAGVPGVGVPGA-GIPVVPG----AGIPGAAVP---- 370
G GP G VG PG P G PG G+P PG G G P
Sbjct: 869 GDGPPGPPGERGPQGPQGPVGFPGPKGP-PGPPGKDGLPGHPGQRGETGFQGKTGPPGPG 927
Query: 371 GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--VGVGGIPGVAGVPGV 428
GVV P+ + G R G G P G G PG G G PG G+ G
Sbjct: 928 GVVGPQG---PTGETGPIGERGHPGPPGPP----GEQGLPGAAGKEGAKGDPGPQGISGK 980
Query: 429 GGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGV 488
G G+ G PG P AQ A K + G P + +A G+ PG
Sbjct: 981 DGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGP 1040
Query: 489 GVAPGVGVAPGVGLAPG----VGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 544
PG G APG G A GV VG+ GP G ++ Q
Sbjct: 1041 QGPPGPAGEKG---APGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQ 1097
Query: 545 LRAAAGLG----AGIPGLGVGVGVPGLGVGAGVPG----LGV-----GAGVPGFGAVPGA 591
+ G G PGL VG PG+ G G PG G+ G GF PG
Sbjct: 1098 KGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGP 1157
Query: 592 LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 651
+ PG G G +G +G PG GP A G VG G
Sbjct: 1158 IGLQGL----PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1213
Query: 652 LGGL--GVGGLGVPGVGGLGGIPPAAAAK--AAKYGVAARPG 689
G G G PG G+GG K A G A PG
Sbjct: 1214 EKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPG 1255
Score = 136 bits (342), Expect = 8e-32
Identities = 245/857 (28%), Positives = 280/857 (32%), Gaps = 228/857 (26%)
Query: 23 PSRPGGVPGAI-PGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGA 81
P P G PG P G PG PGA GP G P K G GA LG G
Sbjct: 665 PQGPIGPPGEKGPQGKPGLAGLPGAD---------GPPGHPGKEGQSGEKGA-LGPP-GP 713
Query: 82 FPAVTFPGALVPGGV--ADAAAAYKAAKAGAGLGGVPGV-GGLGVSAAPSVPGAVVPQ-- 136
+ +PG P GV AD K +K G G PG G +G+ G + P+
Sbjct: 714 QGPIGYPG---PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGE 770
Query: 137 ---------------PGAGVKPGKVPGVGLPGV--YPG--GVLPGARFPGVGVLPGVPTG 177
PG + G+ +G+PG+ YPG G FPG G
Sbjct: 771 DGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGA 830
Query: 178 AGVKPKA-----------------------PGVGGAFAGIPGVGPFG--GPQ-PGVPLGY 211
GV K PG G G GP G GPQ P P+G+
Sbjct: 831 RGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGF 890
Query: 212 PIKA--PKLPGGYGLPYTTGKL-------------PYGY----GPGGVAGAAGKAGYPTG 252
P P PG GLP G+ P G GP G G G+ G+P
Sbjct: 891 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGP 950
Query: 253 TGV-GPQAAAAAAAKAAAKFGAGAAGV-----------------LPGV-------GGAGV 287
G G Q AA K AK G G+ LPG GG G
Sbjct: 951 PGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGP 1010
Query: 288 PGVPGAI--PGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGV--- 338
G PG + PG G AG +G P A + GA P GP GV
Sbjct: 1011 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGP 1070
Query: 339 VGVPG----AGVPG-------VGVPGA----------GIPVVPG----AGIPG-AAVPGV 372
VG+PG AG PG +G PG G P PG G PG A G
Sbjct: 1071 VGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE 1130
Query: 373 VSPEAAAKAAAKAAKYGAR-----PG-VGVGGIP--------TYGVGAGGFPG------- 411
P + GAR PG +G+ G+P VG G PG
Sbjct: 1131 PGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGP 1190
Query: 412 -------------------FGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEA--QAA 449
GVG G PG AG PG G GVGG G G EA A
Sbjct: 1191 QGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGA 1250
Query: 450 AAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVA 509
A AK G P K F PG PG GVG G PG
Sbjct: 1251 AGPPGAK---GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGP 1307
Query: 510 PGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA--------------- 553
PG G PG GP G A A + AK + A G
Sbjct: 1308 PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGP 1367
Query: 554 ----GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--------------AA 595
GIPG G+PG G PG G+PG PG+
Sbjct: 1368 EGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGE 1427
Query: 596 KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL 655
+ K +PG G GA G GIPG GP G G AG
Sbjct: 1428 QGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG---- 1483
Query: 656 GVGGLGVPGVGGLGGIP 672
G G+PG G G P
Sbjct: 1484 QKGDSGLPGPPGSPGPP 1500
Score = 132 bits (332), Expect = 1e-30
Identities = 199/656 (30%), Positives = 226/656 (34%), Gaps = 88/656 (13%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGL 79
HP + G G G PGGV P G G +G G P P P G GL
Sbjct: 908 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--PIGERGHPGPPGPPG--EQGLPGAA 963
Query: 80 GAFPAVTFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQP 137
G A PG P G++ D A + GL G G GL P P V P
Sbjct: 964 GKEGAKGDPG---PQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1020
Query: 138 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV 197
G G +GLPG PG + P PG P G P G G AG GV
Sbjct: 1021 GERGSAGTAGPIGLPG------RPGPQGP-----PG-PAGEKGAPGEKGPQGP-AGRDGV 1067
Query: 198 -GPFGGPQPGVPLGYP--------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
GP G P P P G P I P G G G GP G+ G G G
Sbjct: 1068 QGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP----GPPGLQGPVGAPG 1123
Query: 249 YPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G G GP+ + + G G +G G+PG PG G + +G P
Sbjct: 1124 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1183
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIP 365
G P GP PG VG G GV G PG AG P PG AG+
Sbjct: 1184 PPGPRGPQGPNGADG------PQGP---PGSVGSVG-GVGEKGEPGEAGNPGPPGEAGVG 1233
Query: 366 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
G G + A A GA+ G G P G GFPG G G PG AG
Sbjct: 1234 GPK--GERGEKGEAGPPGAAGPPGAKGPPGDDG-PKGNPGPVGFPG-DPGPPGEPGPAGQ 1289
Query: 426 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAA------KAAAKAAQFGLV 479
GVGG G G PG P A G P AA A K A A
Sbjct: 1290 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGP 1349
Query: 480 PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAK 538
PG G G G+ PG G+ A G PG +GP G+
Sbjct: 1350 PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGS 1409
Query: 539 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 598
K G PGL +G PG G GL G PG A
Sbjct: 1410 KGEK-----------GHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG-------------A 1445
Query: 599 KYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 654
K +PG G LG G G+PG GP + A + GL G G G
Sbjct: 1446 KGDGGIPGPAGPLGPPGPPGLPG---PQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1498
Score = 110 bits (274), Expect = 6e-24
Identities = 205/729 (28%), Positives = 249/729 (34%), Gaps = 131/729 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P+ P G+ G P G+ G PG G GP G+P P GL G G
Sbjct: 407 PAGPAGIMG--PPGLQGPTGPPG------DPGDRGPPGRPGLPGADGLPGP---PGTMLM 455
Query: 83 PAVTFPGALVPGGVADAAAAYKAA---KAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGA 139
+ G G A A A +A L G PG GL
Sbjct: 456 LPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG---------------- 499
Query: 140 GVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
+PG V G G G PG + P GV PG PTG K PG G G+PG
Sbjct: 500 --RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGG-RGMPGEP 555
Query: 199 PFGGPQ-----PGVP--LGY-----PIKAPKLPGGYGLPYTTGK-----LPYGYGPGGVA 241
G + PG+P G+ P P PG G+ G+ LP GP G+
Sbjct: 556 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL 615
Query: 242 GAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIG 298
G G G P G+ G + G G G G+PG G I PG
Sbjct: 616 GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEK 675
Query: 299 GIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGP----GFGPGVVGVPGA-GVPGV 349
G G G P A K + G L P GP G+ PG GV GA GV G+
Sbjct: 676 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGY-PGPRGVKGADGVRGL 734
Query: 350 ----------GVPG--AGIPVVPGAGIPGAAVP-GVVSPEAAAKAA------AKAAKYGA 390
G PG + + G G P G PE A + + G
Sbjct: 735 KGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGE 794
Query: 391 RPGVGVGGIPTY-----GVGAGGFPGF--GVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
+ +GV G+P Y G+ GFPGF G G GVAG PG G G G G +
Sbjct: 795 KGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGA 854
Query: 444 PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPG---- 499
K G G P + PG PG G+ PG
Sbjct: 855 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGE 914
Query: 500 VGL-----APGVGVAPG----VGVAPGVGVAPGIGPGG-------VAAAAKSAAKVAAKA 543
G PG G G G +G GP G AA K AK
Sbjct: 915 TGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP 974
Query: 544 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA 603
Q + AG+ G G+PG G PGL G G G PG + +
Sbjct: 975 QGISGKDGPAGLRGFPGERGLPG---AQGAPGLKGGEGPQG---PPGPVGS--------- 1019
Query: 604 VPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 663
PG G G G +G+PG GP A A + G G G+ G +G+P
Sbjct: 1020 -PGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGV----QGPVGLP 1074
Query: 664 GVGGLGGIP 672
G G G P
Sbjct: 1075 GPAGPAGSP 1083
Score = 92.0 bits (227), Expect = 2e-18
Identities = 162/522 (31%), Positives = 181/522 (34%), Gaps = 120/522 (22%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
PG G P G PG V PG A G GP G P +P P G G G
Sbjct: 1002 PGLKGGEGPQGPPGPVGSPGERGSA---GTAGPIGLPGRPGPQGPPGPAGEKGA------ 1052
Query: 86 TFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVP--QPGAG 140
PG P G A D AG G PG G G P G+ + G
Sbjct: 1053 --PGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1110
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP----------GVGVLPGVPTGAGVK--PKAPGVG 188
PG VG PG+ G PG R G PG P G++ P PG
Sbjct: 1111 GPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEK 1170
Query: 189 GAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G + +GP G P P P G P A G G P + G + G G G G AG G
Sbjct: 1171 GENGDVGPMGPPGPPGPRGPQG-PNGAD---GPQGPPGSVGSVG-GVGEKGEPGEAGNPG 1225
Query: 249 YPTGTGVG--------------PQAAAAAAAKA-----AAKFGAGAAGV----------- 278
P GVG P AA AK K G G
Sbjct: 1226 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPG 1285
Query: 279 ---LPGVGGA----GVPGVPGAIPGIGGIAGVGTP--------AAAAAAAAAAKAAKYGA 323
GVGG G PG PG PG G AG P AA A K AK A
Sbjct: 1286 PAGQDGVGGDKGEDGDPGQPGP-PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEA 1344
Query: 324 AAGLVPGGPG-FGP-GVVGVPGA----GVPGV----GVPGA----------GIPVVPGA- 362
A PG G GP G G PG G+PG G+PGA G P +PG
Sbjct: 1345 GAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLK 1404
Query: 363 GIPGA-------AVPGVVSP--EAAAKAAAKAAKYGARPGV-GVGGIPTYG--VGAGGFP 410
G PG+ + G++ P E K PG G GGIP +G G P
Sbjct: 1405 GDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPP 1464
Query: 411 GF--------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G G G G G G+ G PG G PG I P
Sbjct: 1465 GLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQP 1506
Score = 89.0 bits (219), Expect = 1e-17
Identities = 146/519 (28%), Positives = 177/519 (34%), Gaps = 95/519 (18%)
Query: 182 PKAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK---LPYGYGP 237
P P G PG+ GP G P G P + P LPG GLP G LP+ YG
Sbjct: 404 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFRYGG 462
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G PT + Q A A A A+ + G PG +
Sbjct: 463 DGSKG-------PT---ISAQEAQAQAILQQARIA--------------LRGPPGPMGLT 498
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIP 357
G VG P ++ A + G P GP PG G PGA G G+P
Sbjct: 499 GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGAD------GGRGMP 552
Query: 358 VVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG 413
PGA G G +PG+ + G G+ G +G G PG
Sbjct: 553 GEPGAKGDRGFDG--LPGLPGDKGHRGERGPQGPPGPPGDDGMRG-EDGEIGPRGLPG-E 608
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKA 473
G G+ G G PG G PG+ GV G K G P
Sbjct: 609 AGPRGLLGPRGTPGAPGQPGMAGVDG---------PPGPKGNMGPQGEPGP--------- 650
Query: 474 AQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 533
PG PG PG G G PG+ PG PG PG +
Sbjct: 651 ------PGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG-HPGKEGQSG 703
Query: 534 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG-LGV-GA-GVPGLGVGAGVPGFGAVPG 590
+ A G PG +G PG GV GA GV GL G G PG
Sbjct: 704 EKGA---------------LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPG 748
Query: 591 ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAA 650
K + G G +G +G G G G A + +A + G +G
Sbjct: 749 -------FKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP 801
Query: 651 GLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
GL G G G G G G P A K A+ GVA +PG
Sbjct: 802 GLPGY-PGRQGPKGSTGFPGFPGANGEKGAR-GVAGKPG 838
Score = 64.3 bits (155), Expect = 4e-10
Identities = 92/316 (29%), Positives = 108/316 (34%), Gaps = 24/316 (7%)
Query: 392 PGVGVGGIPTYGVGAG--GFPGFG--VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQ 447
PG+ V G P AG G PG G G PG G PG G+PG G+PG P
Sbjct: 397 PGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPG---PPGTM 453
Query: 448 AAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVG 507
+ G P +A +A A+A + PG G+ PG PG
Sbjct: 454 LMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPG---PMGLTGRPGPVGGPGSS 510
Query: 508 VAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL 567
A G PG GP GV K + R A G G+PG G G
Sbjct: 511 GAKGESGDPGPQ-----GPRGVQGPPGPTGKPGKRG--RPGADGGRGMPGEPGAKGDRGF 563
Query: 568 GVGAGVPGLGVGAGVPGFGAVPG-----ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGG 622
G+PG G G PG + +PG G G LG G PG
Sbjct: 564 DGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGA 623
Query: 623 VVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKY 682
G A G G G G G G+PG G G PP K
Sbjct: 624 PGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQG-NPGPQGLPGPQGPIG-PPGEKGPQGKP 681
Query: 683 GVAARPGFGLSPIFPG 698
G+A PG P PG
Sbjct: 682 GLAGLPGADGPPGHPG 697
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 141 bits (356), Expect = 2e-33
Identities = 224/762 (29%), Positives = 264/762 (34%), Gaps = 139/762 (18%)
Query: 25 RPG--GVPGAIPG-GVPGGVFYPGA-------GLGALGG-----GALGPGGKPLKPVPGG 69
+PG G PGA G G+PG PGA GL L G G GP G P P G
Sbjct: 575 KPGKRGRPGADGGRGMPGE---PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDG 631
Query: 70 LAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPS 128
+ G G P P L+ G G PG G+ GV P
Sbjct: 632 MRGEDGEIGPRGLPGEAGPRGLL---------------GPRGTPGAPGQPGMAGVDGPPG 676
Query: 129 VPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVL--PGARFP-GVGVLPGVPTGAGVKPK 183
G + PQ PG + G GLPG P G + PG + P G L G+P GA P
Sbjct: 677 PKGNMGPQGEPGPPGQQGNPGPQGLPG--PQGPIGPPGEKGPQGKPGLAGLP-GADGPPG 733
Query: 184 APGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPK----LPGGYGLPYTTGK-----LPYG 234
PG G +GP P P P+GYP P+ G GL + G+ P
Sbjct: 734 HPGKEGQSGEKGALGP---PGPQGPIGYP--GPRGVKGADGVRGLKGSKGEKGEDGFPGF 788
Query: 235 YGPGGVAGAAGKAGY--PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
G G+ G G+ G P G GP+ A +G AG +G G+PG PG
Sbjct: 789 KGDMGLKGDRGEVGQIGPRGED-GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPG 847
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-------------------- 332
G G P A A A K G P GP
Sbjct: 848 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSG 907
Query: 333 GFGP-------------GVVGVPGAGVPGVGVPGA-GIPVVPG----AGIPGAAVP---- 370
G GP G VG PG P G PG G+P PG G G P
Sbjct: 908 GDGPPGPPGERGPQGPQGPVGFPGPKGP-PGPPGKDGLPGHPGQRGETGFQGKTGPPGPG 966
Query: 371 GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--VGVGGIPGVAGVPGV 428
GVV P+ + G R G G P G G PG G G PG G+ G
Sbjct: 967 GVVGPQG---PTGETGPIGERGHPGPPGPP----GEQGLPGAAGKEGAKGDPGPQGISGK 1019
Query: 429 GGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGV 488
G G+ G PG P AQ A K + G P + +A G+ PG
Sbjct: 1020 DGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGP 1079
Query: 489 GVAPGVGVAPGVGLAPG----VGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 544
PG G APG G A GV VG+ GP G ++ Q
Sbjct: 1080 QGPPGPAGEKG---APGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQ 1136
Query: 545 LRAAAGLG----AGIPGLGVGVGVPGLGVGAGVPG----LGV-----GAGVPGFGAVPGA 591
+ G G PGL VG PG+ G G PG G+ G GF PG
Sbjct: 1137 KGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGP 1196
Query: 592 LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 651
+ PG G G +G +G PG GP A G VG G
Sbjct: 1197 IGLQGL----PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVG 1252
Query: 652 LGGL--GVGGLGVPGVGGLGGIPPAAAAK--AAKYGVAARPG 689
G G G PG G+GG K A G A PG
Sbjct: 1253 EKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPG 1294
Score = 136 bits (342), Expect = 8e-32
Identities = 245/857 (28%), Positives = 280/857 (32%), Gaps = 228/857 (26%)
Query: 23 PSRPGGVPGAI-PGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGA 81
P P G PG P G PG PGA GP G P K G GA LG G
Sbjct: 704 PQGPIGPPGEKGPQGKPGLAGLPGAD---------GPPGHPGKEGQSGEKGA-LGPP-GP 752
Query: 82 FPAVTFPGALVPGGV--ADAAAAYKAAKAGAGLGGVPGV-GGLGVSAAPSVPGAVVPQ-- 136
+ +PG P GV AD K +K G G PG G +G+ G + P+
Sbjct: 753 QGPIGYPG---PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGE 809
Query: 137 ---------------PGAGVKPGKVPGVGLPGV--YPG--GVLPGARFPGVGVLPGVPTG 177
PG + G+ +G+PG+ YPG G FPG G
Sbjct: 810 DGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGA 869
Query: 178 AGVKPKA-----------------------PGVGGAFAGIPGVGPFG--GPQ-PGVPLGY 211
GV K PG G G GP G GPQ P P+G+
Sbjct: 870 RGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGF 929
Query: 212 PIKA--PKLPGGYGLPYTTGKL-------------PYGY----GPGGVAGAAGKAGYPTG 252
P P PG GLP G+ P G GP G G G+ G+P
Sbjct: 930 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGP 989
Query: 253 TGV-GPQAAAAAAAKAAAKFGAGAAGV-----------------LPGV-------GGAGV 287
G G Q AA K AK G G+ LPG GG G
Sbjct: 990 PGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGP 1049
Query: 288 PGVPGAI--PGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGV--- 338
G PG + PG G AG +G P A + GA P GP GV
Sbjct: 1050 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGP 1109
Query: 339 VGVPG----AGVPG-------VGVPGA----------GIPVVPG----AGIPG-AAVPGV 372
VG+PG AG PG +G PG G P PG G PG A G
Sbjct: 1110 VGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE 1169
Query: 373 VSPEAAAKAAAKAAKYGAR-----PG-VGVGGIP--------TYGVGAGGFPG------- 411
P + GAR PG +G+ G+P VG G PG
Sbjct: 1170 PGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGP 1229
Query: 412 -------------------FGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEA--QAA 449
GVG G PG AG PG G GVGG G G EA A
Sbjct: 1230 QGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGA 1289
Query: 450 AAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVA 509
A AK G P K F PG PG GVG G PG
Sbjct: 1290 AGPPGAK---GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGP 1346
Query: 510 PGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA--------------- 553
PG G PG GP G A A + AK + A G
Sbjct: 1347 PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGP 1406
Query: 554 ----GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--------------AA 595
GIPG G+PG G PG G+PG PG+
Sbjct: 1407 EGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGE 1466
Query: 596 KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL 655
+ K +PG G GA G GIPG GP G G AG
Sbjct: 1467 QGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG---- 1522
Query: 656 GVGGLGVPGVGGLGGIP 672
G G+PG G G P
Sbjct: 1523 QKGDSGLPGPPGSPGPP 1539
Score = 132 bits (332), Expect = 1e-30
Identities = 199/656 (30%), Positives = 226/656 (34%), Gaps = 88/656 (13%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGL 79
HP + G G G PGGV P G G +G G P P P G GL
Sbjct: 947 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--PIGERGHPGPPGPPG--EQGLPGAA 1002
Query: 80 GAFPAVTFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQP 137
G A PG P G++ D A + GL G G GL P P V P
Sbjct: 1003 GKEGAKGDPG---PQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1059
Query: 138 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV 197
G G +GLPG PG + P PG P G P G G AG GV
Sbjct: 1060 GERGSAGTAGPIGLPG------RPGPQGP-----PG-PAGEKGAPGEKGPQGP-AGRDGV 1106
Query: 198 -GPFGGPQPGVPLGYP--------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
GP G P P P G P I P G G G GP G+ G G G
Sbjct: 1107 QGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP----GPPGLQGPVGAPG 1162
Query: 249 YPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G G GP+ + + G G +G G+PG PG G + +G P
Sbjct: 1163 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1222
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIP 365
G P GP PG VG G GV G PG AG P PG AG+
Sbjct: 1223 PPGPRGPQGPNGADG------PQGP---PGSVGSVG-GVGEKGEPGEAGNPGPPGEAGVG 1272
Query: 366 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
G G + A A GA+ G G P G GFPG G G PG AG
Sbjct: 1273 GPK--GERGEKGEAGPPGAAGPPGAKGPPGDDG-PKGNPGPVGFPG-DPGPPGEPGPAGQ 1328
Query: 426 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAA------KAAAKAAQFGLV 479
GVGG G G PG P A G P AA A K A A
Sbjct: 1329 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGP 1388
Query: 480 PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAK 538
PG G G G+ PG G+ A G PG +GP G+
Sbjct: 1389 PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGS 1448
Query: 539 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 598
K G PGL +G PG G GL G PG A
Sbjct: 1449 KGEK-----------GHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG-------------A 1484
Query: 599 KYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 654
K +PG G LG G G+PG GP + A + GL G G G
Sbjct: 1485 KGDGGIPGPAGPLGPPGPPGLPG---PQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1537
Score = 110 bits (274), Expect = 6e-24
Identities = 205/729 (28%), Positives = 249/729 (34%), Gaps = 131/729 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P+ P G+ G P G+ G PG G GP G+P P GL G G
Sbjct: 446 PAGPAGIMG--PPGLQGPTGPPG------DPGDRGPPGRPGLPGADGLPGP---PGTMLM 494
Query: 83 PAVTFPGALVPGGVADAAAAYKAA---KAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGA 139
+ G G A A A +A L G PG GL
Sbjct: 495 LPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG---------------- 538
Query: 140 GVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
+PG V G G G PG + P GV PG PTG K PG G G+PG
Sbjct: 539 --RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGG-RGMPGEP 594
Query: 199 PFGGPQ-----PGVP--LGY-----PIKAPKLPGGYGLPYTTGK-----LPYGYGPGGVA 241
G + PG+P G+ P P PG G+ G+ LP GP G+
Sbjct: 595 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL 654
Query: 242 GAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIG 298
G G G P G+ G + G G G G+PG G I PG
Sbjct: 655 GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEK 714
Query: 299 GIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGP----GFGPGVVGVPGA-GVPGV 349
G G G P A K + G L P GP G+ PG GV GA GV G+
Sbjct: 715 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGY-PGPRGVKGADGVRGL 773
Query: 350 ----------GVPG--AGIPVVPGAGIPGAAVP-GVVSPEAAAKAA------AKAAKYGA 390
G PG + + G G P G PE A + + G
Sbjct: 774 KGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGE 833
Query: 391 RPGVGVGGIPTY-----GVGAGGFPGF--GVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
+ +GV G+P Y G+ GFPGF G G GVAG PG G G G G +
Sbjct: 834 KGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGA 893
Query: 444 PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPG---- 499
K G G P + PG PG G+ PG
Sbjct: 894 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGE 953
Query: 500 VGL-----APGVGVAPG----VGVAPGVGVAPGIGPGG-------VAAAAKSAAKVAAKA 543
G PG G G G +G GP G AA K AK
Sbjct: 954 TGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP 1013
Query: 544 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA 603
Q + AG+ G G+PG G PGL G G G PG + +
Sbjct: 1014 QGISGKDGPAGLRGFPGERGLPG---AQGAPGLKGGEGPQG---PPGPVGS--------- 1058
Query: 604 VPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 663
PG G G G +G+PG GP A A + G G G+ G +G+P
Sbjct: 1059 -PGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGV----QGPVGLP 1113
Query: 664 GVGGLGGIP 672
G G G P
Sbjct: 1114 GPAGPAGSP 1122
Score = 92.0 bits (227), Expect = 2e-18
Identities = 162/522 (31%), Positives = 181/522 (34%), Gaps = 120/522 (22%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
PG G P G PG V PG A G GP G P +P P G G G
Sbjct: 1041 PGLKGGEGPQGPPGPVGSPGERGSA---GTAGPIGLPGRPGPQGPPGPAGEKGA------ 1091
Query: 86 TFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVP--QPGAG 140
PG P G A D AG G PG G G P G+ + G
Sbjct: 1092 --PGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1149
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP----------GVGVLPGVPTGAGVK--PKAPGVG 188
PG VG PG+ G PG R G PG P G++ P PG
Sbjct: 1150 GPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEK 1209
Query: 189 GAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G + +GP G P P P G P A G G P + G + G G G G AG G
Sbjct: 1210 GENGDVGPMGPPGPPGPRGPQG-PNGAD---GPQGPPGSVGSVG-GVGEKGEPGEAGNPG 1264
Query: 249 YPTGTGVG--------------PQAAAAAAAKA-----AAKFGAGAAGV----------- 278
P GVG P AA AK K G G
Sbjct: 1265 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPG 1324
Query: 279 ---LPGVGGA----GVPGVPGAIPGIGGIAGVGTP--------AAAAAAAAAAKAAKYGA 323
GVGG G PG PG PG G AG P AA A K AK A
Sbjct: 1325 PAGQDGVGGDKGEDGDPGQPGP-PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEA 1383
Query: 324 AAGLVPGGPG-FGP-GVVGVPGA----GVPGV----GVPGA----------GIPVVPGA- 362
A PG G GP G G PG G+PG G+PGA G P +PG
Sbjct: 1384 GAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLK 1443
Query: 363 GIPGA-------AVPGVVSP--EAAAKAAAKAAKYGARPGV-GVGGIPTYG--VGAGGFP 410
G PG+ + G++ P E K PG G GGIP +G G P
Sbjct: 1444 GDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPP 1503
Query: 411 GF--------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G G G G G G+ G PG G PG I P
Sbjct: 1504 GLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQP 1545
Score = 89.0 bits (219), Expect = 1e-17
Identities = 146/519 (28%), Positives = 177/519 (34%), Gaps = 95/519 (18%)
Query: 182 PKAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK---LPYGYGP 237
P P G PG+ GP G P G P + P LPG GLP G LP+ YG
Sbjct: 443 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFRYGG 501
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G PT + Q A A A A+ + G PG +
Sbjct: 502 DGSKG-------PT---ISAQEAQAQAILQQARIA--------------LRGPPGPMGLT 537
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIP 357
G VG P ++ A + G P GP PG G PGA G G+P
Sbjct: 538 GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGAD------GGRGMP 591
Query: 358 VVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG 413
PGA G G +PG+ + G G+ G +G G PG
Sbjct: 592 GEPGAKGDRGFDG--LPGLPGDKGHRGERGPQGPPGPPGDDGMRG-EDGEIGPRGLPG-E 647
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKA 473
G G+ G G PG G PG+ GV G K G P
Sbjct: 648 AGPRGLLGPRGTPGAPGQPGMAGVDG---------PPGPKGNMGPQGEPGP--------- 689
Query: 474 AQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 533
PG PG PG G G PG+ PG PG PG +
Sbjct: 690 ------PGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG-HPGKEGQSG 742
Query: 534 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG-LGV-GA-GVPGLGVGAGVPGFGAVPG 590
+ A G PG +G PG GV GA GV GL G G PG
Sbjct: 743 EKGA---------------LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPG 787
Query: 591 ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAA 650
K + G G +G +G G G G A + +A + G +G
Sbjct: 788 -------FKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP 840
Query: 651 GLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
GL G G G G G G P A K A+ GVA +PG
Sbjct: 841 GLPGY-PGRQGPKGSTGFPGFPGANGEKGAR-GVAGKPG 877
Score = 64.3 bits (155), Expect = 4e-10
Identities = 92/316 (29%), Positives = 108/316 (34%), Gaps = 24/316 (7%)
Query: 392 PGVGVGGIPTYGVGAG--GFPGFG--VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQ 447
PG+ V G P AG G PG G G PG G PG G+PG G+PG P
Sbjct: 436 PGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPG---PPGTM 492
Query: 448 AAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVG 507
+ G P +A +A A+A + PG G+ PG PG
Sbjct: 493 LMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPG---PMGLTGRPGPVGGPGSS 549
Query: 508 VAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL 567
A G PG GP GV K + R A G G+PG G G
Sbjct: 550 GAKGESGDPGPQ-----GPRGVQGPPGPTGKPGKRG--RPGADGGRGMPGEPGAKGDRGF 602
Query: 568 GVGAGVPGLGVGAGVPGFGAVPG-----ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGG 622
G+PG G G PG + +PG G G LG G PG
Sbjct: 603 DGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGA 662
Query: 623 VVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKY 682
G A G G G G G G+PG G G PP K
Sbjct: 663 PGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQG-NPGPQGLPGPQGPIG-PPGEKGPQGKP 720
Query: 683 GVAARPGFGLSPIFPG 698
G+A PG P PG
Sbjct: 721 GLAGLPGADGPPGHPG 736
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 141 bits (356), Expect = 2e-33
Identities = 168/559 (30%), Positives = 201/559 (35%), Gaps = 72/559 (12%)
Query: 117 GVGGLGVSAAPSVPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGV 174
G+ G P PG P+ PG PGK PG PG+ PG+
Sbjct: 52 GIAVRGEQGTPGPPGPAGPRGHPGPSGPPGK---------------PGYGSPGLQGEPGL 96
Query: 175 PTGAGVKPKAPGVGGAFAGIPGV----GPFGGPQPGVPLGYPIKAPK-LPGGYGLPYTTG 229
P G P A G G G+PG GP+G P G P P+ PG G+P G
Sbjct: 97 PGPPG--PSAVGKPGV-PGLPGKPGERGPYGPKGDVGPAGLP--GPRGPPGPPGIPGPAG 151
Query: 230 -KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 288
+P G G GA G G+P G P K +GA G+ G P
Sbjct: 152 ISVPGKPGQQGPTGAPGPRGFPGEKG-APGVPGMNGQKGEMGYGAPGRPGERGLPGPQGP 210
Query: 289 GVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPG 348
P PG+G G P + G + P GP PG G G G PG
Sbjct: 211 TGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGP---IGPPGPQGPPGERGPEGIGKPG 267
Query: 349 -VGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
G PG P +PG G+PGA PG+ P PG G G+P
Sbjct: 268 AAGAPGQ--PGIPGTKGLPGA--PGIAGPPGP-------------PGFGKPGLP------ 304
Query: 407 GGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAA 466
G G G G+PG G G G G+ G PG+ P K G P
Sbjct: 305 -GLKG-ERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKG 362
Query: 467 AKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-G 525
A A + G +PG PG PG+ G PG PGVG PG+ G
Sbjct: 363 ETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPG 422
Query: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 585
P G A AK +A R A GIPG +G P G+PG G PG
Sbjct: 423 PVG-PAGAKGMPGHNGEAGPRGA----PGIPGTRGPIGPP------GIPGFPGSKGDPGS 471
Query: 586 GAVPG-ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 644
PG A A K PG G G G G+PG GP A + KA Q
Sbjct: 472 PGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQR 531
Query: 645 GLVGAAGLGGLGVGGLGVP 663
+ L G G+P
Sbjct: 532 PSLSGTPLVSANQGVTGMP 550
Score = 126 bits (316), Expect = 8e-29
Identities = 181/568 (31%), Positives = 217/568 (38%), Gaps = 101/568 (17%)
Query: 28 GVPG-AIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G PG A P G PG P G G G+ G G+P P P G + G G+ P
Sbjct: 63 GPPGPAGPRGHPG----PSGPPGKPGYGSPGLQGEPGLPGPPGPSAVG-KPGVPGLPGK- 116
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPG-AVVPQPGAGVKPGK 145
PG P G K G G+P G G P +PG A + PG KPG+
Sbjct: 117 -PGERGPYG----------PKGDVGPAGLP--GPRGPPGPPGIPGPAGISVPG---KPGQ 160
Query: 146 VPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPK----APGVGGAFAGIPGVGPFG 201
G PG P G FPG PGVP G K + APG G G+P GP G
Sbjct: 161 QGPTGAPG--PRG------FPGEKGAPGVPGMNGQKGEMGYGAPGRPGE-RGLP--GPQG 209
Query: 202 GPQPGVPLGYPIKAPK-LPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAA 260
P P G + +PG G+ G P GP G G G G G+G A
Sbjct: 210 PTGPSGPPGVGKRGENGVPGQPGIKGDRG-FPGEMGPIGPPGPQGPPGERGPEGIGKPGA 268
Query: 261 AAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AIPGIGGIAGVGTPAAAAAAAAAAKAA 319
A A + G G PG+ AG PG PG PG+ G+ G PA
Sbjct: 269 AGAPGQPGIPGTKGLPGA-PGI--AGPPGPPGFGKPGLPGLKGERGPAG----------- 314
Query: 320 KYGAAAGLVPGGPGF--GPGVVGVPGAGVPGV-GVPGAGIPVVPGAGIPGA-AVPGVVSP 375
+PGGPG G G+PG PG+ G PG P P GIPG+ +PG
Sbjct: 315 --------LPGGPGAKGEQGPAGLPGK--PGLTGPPGNMGPQGP-KGIPGSHGLPGPKGE 363
Query: 376 EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVG 435
A A G R G G P G+PG G+ G G G+PG G PGVG
Sbjct: 364 TGPAGPAGYPGAKGERGSPGSDGKP-------GYPG-KPGLDGPKGNPGLPGPKGDPGVG 415
Query: 436 GVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVG 495
G PG+ P A A G P A + G PG+ PG PG
Sbjct: 416 GPPGLP-GPVGPAGAKGMPGHNGEAGPRGAPGIPGTR-GPIG-PPGIPGFPGSKGDPGSP 472
Query: 496 VAPG-VGLA----------PGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKA 543
PG G+A PG G PG+ PG GP G A + K +
Sbjct: 473 GPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRP 532
Query: 544 QLRAAAGLGAGIPGLGVGVGVPGLGVGA 571
L +G P + GV G+ V A
Sbjct: 533 SL-------SGTPLVSANQGVTGMPVSA 553
Score = 122 bits (306), Expect = 1e-27
Identities = 167/503 (33%), Positives = 196/503 (38%), Gaps = 86/503 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGL-------GALGGGALG-PG--GKPLKPVPGGLAG 72
P+ P G PG P G PG Y GL G G A+G PG G P KP G G
Sbjct: 67 PAGPRGHPG--PSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYG 124
Query: 73 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA-GLGGVPGVGGL-GVSAAPSVP 130
G P P P G+ A K G G G PG G G AP VP
Sbjct: 125 PKGDVGPAGLPGPRGPPG--PPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVP 182
Query: 131 GAVVPQPGAGV-KPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 189
G + G PG+ GLPG P G + PGVG G P PG+ G
Sbjct: 183 GMNGQKGEMGYGAPGRPGERGLPG--PQGPTGPSGPPGVG-----KRGENGVPGQPGIKG 235
Query: 190 AFAGIPG-VGPFGGPQPGVP--------LGYPIKA-----PKLPGGYGLPYTTGKL---- 231
G PG +GP G P P P +G P A P +PG GLP G
Sbjct: 236 D-RGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPG 294
Query: 232 PYGYG-PG--GVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGV 287
P G+G PG G+ G G AG P G G G Q A K G G +G G
Sbjct: 295 PPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKP------GLTGPPGNMGPQGP 348
Query: 288 PGVPGA--IPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF-GP-GVVGVPG 343
G+PG+ +PG G G PA A + G PG PG GP G G+PG
Sbjct: 349 KGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGY-PGKPGLDGPKGNPGLPG 407
Query: 344 A-GVPGVG----VPG----AGIPVVPG----------AGIPGAAVPGVVSPEAAAKAAAK 384
G PGVG +PG AG +PG GIPG P + P
Sbjct: 408 PKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGP--IGPPGIPGFPGS 465
Query: 385 AAKYGARPGVGVGGIPTYGV-GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
G+ G GI T G+ G G PG G G +G PG+ G PG G PG +
Sbjct: 466 KGDPGSPGPPGPAGIATKGLNGPTGPPG----PPGPRGHSGEPGLPGPPGPPGPPGQAVM 521
Query: 444 PEAQAAAAAKAAKYGVGTPAAAA 466
PE A + + GTP +A
Sbjct: 522 PEGFIKAGQRPSL--SGTPLVSA 542
Score = 117 bits (293), Expect = 4e-26
Identities = 145/460 (31%), Positives = 176/460 (38%), Gaps = 48/460 (10%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P P G PG IPG P G+ PG GA GP G P + G+ G G +
Sbjct: 137 PRGPPGPPG-IPG--PAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGY 193
Query: 83 PAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAVVPQPGAG 140
A PG +PG + G GVPG G+ G P G + P PG
Sbjct: 194 GAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGP-PGPQ 252
Query: 141 VKPGK--VPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
PG+ G+G PG PG PG LPG P AG P PG G G+PG+
Sbjct: 253 GPPGERGPEGIGKPGAAGAPGQPG--IPGTKGLPGAPGIAG-PPGPPGFGKP--GLPGLK 307
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGY-GLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGP 257
GP G+P G K + P G G P TG P GP G G G G P G
Sbjct: 308 GERGPA-GLPGGPGAKGEQGPAGLPGKPGLTGP-PGNMGPQGPKGIPGSHGLPGPKGETG 365
Query: 258 QAAAAAAAKAAAKFGAGAAGVLPGVGGA-------GVPGVPG--AIPGIGGIAGVGTPAA 308
A A A + G+ + PG G G PG+PG PG+GG G+ P
Sbjct: 366 PAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVG 425
Query: 309 AAAAAAAAKAAKYGAAAGLVPGGPG-FGP-GVVGVPGAGVPGVGVPGAGIPVVPGA---- 362
A A +PG G GP G G+PG P +G PG IP PG+
Sbjct: 426 PAGAKG-------------MPGHNGEAGPRGAPGIPGTRGP-IGPPG--IPGFPGSKGDP 469
Query: 363 GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGV 422
G PG P ++ + G R G G+P G G PG V G
Sbjct: 470 GSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPG-PPGPPGPPGQAVMPEGFIKA 528
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTP 462
P + G P V GV P + A +GTP
Sbjct: 529 GQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTP 568
Score = 108 bits (271), Expect = 1e-23
Identities = 148/499 (29%), Positives = 178/499 (35%), Gaps = 101/499 (20%)
Query: 198 GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGY----GPGGVAGAAGKAGYPTGT 253
G F + +P G P + +PYT G G G AG G+P
Sbjct: 18 GVFYAERYQMPTGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHP--- 74
Query: 254 GVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAA 313
GP +G G PG G G+ G PG +PG G + VG P
Sbjct: 75 --GP---------------SGPPGK-PGYGSPGLQGEPG-LPGPPGPSAVGKPGVPGLPG 115
Query: 314 AAAKAAKYGAAAGLVPGG---PGFGPGVVGVPG-AGVPGVGVPGAGIPV-VPGA-GIPGA 367
+ YG + P G P PG G+PG AG+ G PG P PG G PG
Sbjct: 116 KPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGE 175
Query: 368 -AVPGVVSPEAAAKAAAKAAKYGA--RPGV-GVGGIPTYGVGAGGFPGFGV-GVGGIPGV 422
PGV YGA RPG G+ G P G G PG G G G+PG
Sbjct: 176 KGAPGVPGMNGQKGEMG----YGAPGRPGERGLPG-PQGPTGPSGPPGVGKRGENGVPGQ 230
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 482
G+ G G PG G I P + G+G P AA A PG+
Sbjct: 231 PGIKGDRGFPGEMGP----IGPPGPQGPPGERGPEGIGKPGAAGAPGQ---------PGI 277
Query: 483 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAK 542
G+ APG+ PG PG G PG+ G G+ PGG A +
Sbjct: 278 PGTKGLPGAPGIAGPPG---PPGFG-KPGLPGLKGERGPAGL-PGGPGAKGEQGP----- 327
Query: 543 AQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGA 602
AG+PG PGL G G G+PG +PG A A
Sbjct: 328 ----------AGLPGK------PGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAG-PA 370
Query: 603 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGV 662
PG G G+ G G PG + GL G G GL G G
Sbjct: 371 GYPGAKGERGSPGSDGKPG------------------YPGKPGLDGPKGNPGLP-GPKGD 411
Query: 663 PGVGGLGGIPPAAAAKAAK 681
PGVGG G+P AK
Sbjct: 412 PGVGGPPGLPGPVGPAGAK 430
Score = 48.5 bits (114), Expect = 2e-05
Identities = 66/226 (29%), Positives = 77/226 (34%), Gaps = 45/226 (19%)
Query: 479 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAA 537
V G PG G PG PG PG G +PG+ PG+ GP G +A K
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPG---KPGYG-SPGLQGEPGLPGPPGPSAVGKPGV 110
Query: 538 KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKA 597
G+PG G G G GL G PG +PG +
Sbjct: 111 P---------------GLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVP 155
Query: 598 AKYGAAVPGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 652
K PG G GA G G PG GV G A + + GL G G
Sbjct: 156 GK-----PGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQG- 209
Query: 653 GGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
G G PGVG K + GV +PG FPG
Sbjct: 210 ---PTGPSGPPGVG-----------KRGENGVPGQPGIKGDRGFPG 241
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 140 bits (353), Expect = 4e-33
Identities = 205/665 (30%), Positives = 243/665 (36%), Gaps = 126/665 (18%)
Query: 52 GGGALGPGG----KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAK 107
GGGA G G K ++P+ G G G G + + P L+P
Sbjct: 29 GGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLP--LLP-------------- 72
Query: 108 AGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVY----PGGVLPGA 163
L G PG P PG P PG PGK PG+G PG++ P G PG
Sbjct: 73 --MDLKGEPG--------PPGKPGPRGP-PGPPGFPGK-PGMGKPGLHGQPGPAGP-PGF 119
Query: 164 RFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQ--PGVPLGYPIKAPKLPGG 221
G PG+P G P PG+ G GI G GP PG+P I P PG
Sbjct: 120 SRMGKAGPPGLPGKVG-PPGQPGLRGE-PGIRGDQGLRGPPGPPGLPGPSGITIPGKPGA 177
Query: 222 YGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPG 281
G+P GP G G G G P GP G G G LPG
Sbjct: 178 QGVP----------GPPGFQGEPGPQGEP-----GPPGDRGLKGDN----GVGQPG-LPG 217
Query: 282 VGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 341
G G G PG PG+ G AG+G P A + G VPG G PG VG
Sbjct: 218 APGQG--GAPGP-PGLPGPAGLGKPGLDGLPGAPGDKGESGPPG--VPGPRG-EPGAVGP 271
Query: 342 PGA-GVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP 400
G GV GVGVPGA AG+PG P E + G G+ G+P
Sbjct: 272 KGPPGVDGVGVPGA-------AGLPGPQGPSGAKGEPGTRGPPGLI---GPTGYGMPGLP 321
Query: 401 --TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG 458
G G PG +G G PG G PG G G+GG PG+ +A + G
Sbjct: 322 GPKGDRGPAGVPGL-LGDRGEPGEDGEPGEQGPQGLGGPPGL-------PGSAGLPGRRG 373
Query: 459 VGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV 518
P A G G PGV G G+ PGV PG PG
Sbjct: 374 PPGPKGEA--------------GPGGPPGVPGIRGDQGPSGLAGKPGV---PGERGLPGA 416
Query: 519 GVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGL 576
PG GP G L LG G PGL G+PGL AG G
Sbjct: 417 HGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGP 476
Query: 577 GVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVG-AGPAAAAA 633
G+ G +PG +A + G A G G G+PG G+ G GP
Sbjct: 477 QGLPGLKGEPGLPGPPGEGRAGEPGTA--------GPTGPPGVPGSPGITGPPGPPGPPG 528
Query: 634 AAKAAAKAAQFGLVGAAGLGGLGVGGLGVPG-VGGLGGIPPAAAAKAAKYGVAARPGFGL 692
A G G+ GL + GV G V G GG P + + + A
Sbjct: 529 PPGAP------GAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLT 582
Query: 693 SPIFP 697
SP FP
Sbjct: 583 SP-FP 586
Score = 128 bits (322), Expect = 2e-29
Identities = 161/462 (34%), Positives = 180/462 (38%), Gaps = 80/462 (17%)
Query: 26 PGGVPG------AIPGGVPGGVFYPGA-GLGALGG-----GALGPGGKPLKPVPGGLAGA 73
P G PG A P G+PG V PG GL G G GP G P P P G+
Sbjct: 113 PAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIP 172
Query: 74 GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAV 133
G G F G P G GL G GVG G+ AP GA
Sbjct: 173 GKPGAQGVPGPPGFQGEPGPQGEP-------GPPGDRGLKGDNGVGQPGLPGAPGQGGA- 224
Query: 134 VPQPGAGVKPGKVPGVGLPGV--YPGGVLPGARFPGVGVLPGVPTGAG----VKPKAP-G 186
PG PG G+G PG+ PG PG + G PGVP G V PK P G
Sbjct: 225 ---PGPPGLPGPA-GLGKPGLDGLPGA--PGDK--GESGPPGVPGPRGEPGAVGPKGPPG 276
Query: 187 VGGAFAGIPGVGPFGGPQ-PGVPLGYPIKA--PKL--PGGYGLPYTTGKLPYG-YGPGGV 240
V G G+PG GPQ P G P P L P GYG+P G P G GP GV
Sbjct: 277 VDGV--GVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPG--PKGDRGPAGV 332
Query: 241 AGAAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPG 296
G G G P G GPQ + G G PG G PG P +PG
Sbjct: 333 PGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGP-PGPKGEAGPGGPPGVPG 391
Query: 297 IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA-- 354
I G G A + GA P GP PG G PG G GV GA
Sbjct: 392 IRG--DQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPG----GPGVAGALG 445
Query: 355 -----GIPVVPG----AGIPGAAVP-GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
G+P PG +GIPG P G + P+ G + G+ G P G
Sbjct: 446 QKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLP---------GLKGEPGLPGPP--GE 494
Query: 405 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEA 446
G G PG G G PGV G PG+ G PG G PG +P A
Sbjct: 495 GRAGEPGTA-GPTGPPGVPGSPGITGPPGPPGPPGPPGAPGA 535
Score = 107 bits (266), Expect = 5e-23
Identities = 169/576 (29%), Positives = 203/576 (35%), Gaps = 118/576 (20%)
Query: 179 GVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK-----LPY 233
G P+A GGA GG P+ Y P G G P+ GK +P
Sbjct: 21 GCGPRASSGGGA----------GGAAGYAPVKYI--QPMQKGPVGPPFREGKGQYLEMPL 68
Query: 234 GYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGA 293
P + G G G P GP+ G G PG PG
Sbjct: 69 PLLPMDLKGEPGPPGKP-----GPR------------------------GPPGPPGFPGK 99
Query: 294 IPGIG--GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPGA-GVPG 348
PG+G G+ G PA + KA G +PG GP PG+ G PG G G
Sbjct: 100 -PGMGKPGLHGQPGPAGPPGFSRMGKAGPPG-----LPGKVGPPGQPGLRGEPGIRGDQG 153
Query: 349 VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV-GVGGIPTYGVGAG 407
+ P G P +PG G +PG + A+ + PG G G P G
Sbjct: 154 LRGP-PGPPGLPGPS--GITIPG----KPGAQGVPGPPGFQGEPGPQGEPGPP----GDR 202
Query: 408 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPG-VGI-SPEAQAAAAAKAAKYGVGTPAAA 465
G G GVG PG+ G PG GG PG G+PG G+ P A K G P
Sbjct: 203 GLKGDN-GVGQ-PGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVP 260
Query: 466 AAKAAAKAAQFGLVPGV-GV-APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 523
+ A PGV GV PG PG G PG PG+ G G+ PG
Sbjct: 261 GPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGM-PG 319
Query: 524 I-------GPGGVAAAAKSAAKVAAKAQ--LRAAAGLG--------AGIPGL-------- 558
+ GP GV + + + GLG AG+PG
Sbjct: 320 LPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKG 379
Query: 559 ----GVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA----AAKAAKYG----AAVPG 606
G GVPG+ G GL GVPG +PGA + G PG
Sbjct: 380 EAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPG 439
Query: 607 VLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL----GVGGLGV 662
V G LG G +G+PG GP+ A GL G G GL G G G
Sbjct: 440 VAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGE 499
Query: 663 PGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
PG G G PP G PG P PG
Sbjct: 500 PGTAGPTG-PPGVPGSPGITGPPGPPGPPGPPGAPG 534
Score = 98.6 bits (244), Expect = 2e-20
Identities = 145/466 (31%), Positives = 173/466 (37%), Gaps = 102/466 (21%)
Query: 23 PSRPG--GVPGAIPG--GVPGGVFYPG--AGLGALGGGALGPGGKPLKPVPGGLAGA-GL 75
P +PG GVPG PG G PG PG G G +G G P P GG G GL
Sbjct: 172 PGKPGAQGVPGP-PGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGL 230
Query: 76 G--AGLGAFPAVTFPGALVPGGVADAAAAYKAAKAG----AGLGGVPGVGGLGVSAAPSV 129
AGLG PGA PG ++ G G G PGV G+GV A +
Sbjct: 231 PGPAGLGKPGLDGLPGA--PGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGL 288
Query: 130 PGAVVP-----QPGAGVKPGKV--PGVGLPGVYPG-----------GVLPGARFPGVGVL 171
PG P +PG PG + G G+PG+ PG G+L PG
Sbjct: 289 PGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGL-PGPKGDRGPAGVPGLLGDRGEPGEDGE 347
Query: 172 PGV--PTGAGVKPKAPGVGGAFAGIPG----VGPFGGPQPGVPLGYP-IKAPKLPGGY-G 223
PG P G G P PG AG+PG GP G PG P G P I+ + P G G
Sbjct: 348 PGEQGPQGLGGPPGLPGS----AGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAG 403
Query: 224 LPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGA-------- 273
P G+ LP +GP G G G+ G+ TG GP A A K
Sbjct: 404 KPGVPGERGLPGAHGPPGPTGPKGEPGF-TGRPGGPGVAGALGQKGDLGLPGQPGLRGPS 462
Query: 274 ------GAAGVL-----------------PGVGGAGVPGVPG-----AIPGIGGIAGVGT 305
G AG + PG G AG PG G +PG GI G
Sbjct: 463 GIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPG 522
Query: 306 PAAAAAAAAAAKAAKYGAAAGL-VPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGI 364
P A A AGL +P G GV GA + G P G+ +
Sbjct: 523 PPGPPGPPGAPGAFDETGIAGLHLPNG--------GVEGAVLGKGGKPQFGLGELSAHAT 574
Query: 365 PGAAVPGVVSPEAAAKAAAKAAK------YGARPGVGVGGIPTYGV 404
P A + SP A+ K + G P G+ P GV
Sbjct: 575 P-AFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGV 619
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 139 bits (350), Expect = 9e-33
Identities = 218/730 (29%), Positives = 255/730 (34%), Gaps = 112/730 (15%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKP-LKPVPG--GLAGA-GLGAGLGAFP 83
G+PGA PG G + PG G GP G P L+ VPG GL G GL A LG+ P
Sbjct: 888 GMPGA-PGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLP 946
Query: 84 AVTFPGALVPGGVADAAAA---YKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAG 140
+ G A Y K G G+PGV GL A + + +P A
Sbjct: 947 IEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLS---LERPRAE 1003
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV-GP 199
G G PG LPG PG+P G + G PG+ G
Sbjct: 1004 EARGD-NSEGDPGCVGSPGLPGP--------PGLPGQRGEE-----------GPPGMRGS 1043
Query: 200 FGGPQPGVPLGYP--IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGP 257
G P P P G+P + +P LPG G TG G G G G+ GYP TG P
Sbjct: 1044 PGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLT----GDKGEPGPPGQPGYPGATG--P 1097
Query: 258 QAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAK 317
+ AG G G G+PG PG G G +
Sbjct: 1098 PGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQ 1157
Query: 318 AAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV-----GVPG-AGIPVVPGAGIPGAAVPG 371
G PG PGF PG VG PG P G+ G +G+P PG P PG
Sbjct: 1158 PGFPGP-----PGPPGF-PGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGP----PG 1207
Query: 372 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG--GIPGVAGVPGVG 429
+ P K K G R G G P G G PGF G G+PG G G
Sbjct: 1208 IQGPAGLDGLDGKDGKPGLRGDPGPAGPP----GLMGPPGFKGKTGHPGLPGPKGDCGKP 1263
Query: 430 GVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVG 489
G PG G PG P A VG P A + GL G G
Sbjct: 1264 GPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERG 1323
Query: 490 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-------GPGGVAAAAKSAAKVAAK 542
+A G+ PG PG PG A G PG GP G AA + K
Sbjct: 1324 LA-GLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEK 1382
Query: 543 AQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--------- 593
RA G G G VG PG G PG +G PG VPG++
Sbjct: 1383 G--RAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIK 1440
Query: 594 -----------AAKAAKYG---------AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA 633
+ A Y AA PG G G G G PG P +
Sbjct: 1441 RFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPG-----APGSPGL 1495
Query: 634 AAKAAAKAAQFGLVGAAGLGGL----GVGGLGVPGVGGLGGIP-PAAAAKAAKYGVAARP 688
+ + Q GL G GL G G G+G+ G GL G P P K G
Sbjct: 1496 PGQIGREGRQ-GLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPM 1554
Query: 689 GFGLSPIFPG 698
G P PG
Sbjct: 1555 GQQGIPGIPG 1564
Score = 137 bits (346), Expect = 3e-32
Identities = 211/712 (29%), Positives = 254/712 (35%), Gaps = 150/712 (21%)
Query: 89 GALVPGGVADAAA--AYKAAKAGAGLGGVPGVGG----------LGVSAAPSVPGAVVPQ 136
GAL P G+ + K K G+ GVPG G +G PG V P+
Sbjct: 384 GALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPE 443
Query: 137 -----PGAGVKPGKVPGVGLPGVY--PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 189
PG PG PG+GLPG PGG G +PG G G KP PGV G
Sbjct: 444 GLAGEPGPPGLPGP-PGIGLPGTPGDPGGPPGPKGDKGSSGIPG-KEGPGGKPGKPGVKG 501
Query: 190 A-----------------FAGIPGV-GPFGGPQPGVPL-------------GYP-IKAPK 217
F G+PG GP G P VP G P +
Sbjct: 502 EKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSS 561
Query: 218 LPG-----------------GYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTG-VGP 257
+ G G+GLP G+ +P G G G AG AG P G VGP
Sbjct: 562 VVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGP 621
Query: 258 QAAAAAAAK------AAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 311
A + A + G V+ G +G G PG G G P
Sbjct: 622 AGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGP-------PGFGLPGKQGK 674
Query: 312 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGVGVPGA----------GIPVVP 360
A + G A PG PG PG G PG +G PGV P P +
Sbjct: 675 AGERGLKGQKGDAGN--PGDPGT-PGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQ 731
Query: 361 GAGIPGAAVPGVVSP--EAAAKAAAKAAKYGARPGV-GVGGIPTY-GV-GAGGFPGFGV- 414
G A PG P E + + K G +PG+ GV G P GV G G PG GV
Sbjct: 732 GTVTDMAGRPGQPGPKGEQGPEGVGRPGKPG-QPGLPGVQGPPGLKGVQGEPGPPGRGVQ 790
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAA 474
G G PG G+PG+ G+PG G PG AQ + K A VG P A+ + +
Sbjct: 791 GPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDG 850
Query: 475 QFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVG--VAPGVGVAPGVGVAPGIGPGGVAAA 532
Q G G+ PG G PG P G + G+ APG+ + PG
Sbjct: 851 QQGQT-GLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGP- 908
Query: 533 AKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 592
GIPG GVPGL GVPG G PG A G+L
Sbjct: 909 --------------------PGIPGPPGPPGVPGL---QGVPGNNGLPGQPGLTAELGSL 945
Query: 593 ---------AAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQ 643
+ A PG L G G GIP GV G A + +A +
Sbjct: 946 PIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIP-GVPGLDNCAQCFLSLERPRAEE 1004
Query: 644 FGLVGAAGLGGLGVGGLGVPGVGGLGGI-----PPAAAAKAAKYGVAARPGF 690
+ G G VG G+PG GL G PP G PGF
Sbjct: 1005 ARGDNSEGDPGC-VGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGF 1055
Score = 128 bits (322), Expect = 2e-29
Identities = 233/822 (28%), Positives = 279/822 (33%), Gaps = 171/822 (20%)
Query: 10 RPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPG-AGLGALG---------------- 52
RPG + ++ PG V G PG PG G+G G
Sbjct: 421 RPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKG 480
Query: 53 ----GGALGPGGKPLKPVPGGLAG------AGLGAGLGAFPAVTFPGALVPGGVADAAAA 102
G GPGGKP KP G G L G F V PG P G
Sbjct: 481 SSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNF--VGLPGKPGPKGEPGDPV- 537
Query: 103 YKAAKAGAGLGGVPGVGGLGVSAAPSVPGA--VVPQPGAGVKPGKVPGVGLPGVYPGGVL 160
A+ G+ G+ G G + SV GA +V GA G PG GLPG+ +
Sbjct: 538 --PARGDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGS-PGFGLPGLPGRAGV 594
Query: 161 PGAR-----FPGVGVL-----PGVPTGAGVK-------PKAPGVGGAFAGIPGVGPFGGP 203
PG + F G PG AG+K P + G V GP
Sbjct: 595 PGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGP 654
Query: 204 -----QPGVP-LGYPIKAPKL--------------PGGYGLPYTTGKLPYGYGPGGVAGA 243
+PG P G P K K PG G P TTG+ P G GV G
Sbjct: 655 SGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGR-PGLSGEPGVQGP 713
Query: 244 AGKAGYP-TGTGVGPQAAAAAAAKAAAKFGAGAAGVL--PGVGGAGVPGVPGAIPGIGGI 300
AG G G P A G G GVG G PG PG +PG+ G
Sbjct: 714 AGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPG-LPGVQGP 772
Query: 301 AGV----GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG-VGVPGA 354
G+ G P + PG PG PG+ G+PG G PG G GA
Sbjct: 773 PGLKGVQGEPGPPGRGVQGPQGE---------PGAPGL-PGIQGLPGPRGPPGPTGEKGA 822
Query: 355 -GIPVVPGA----GIPGAAV---PGVVSPEAAAKAAAKAAKYGAR-----PG-------- 393
G P V GA G PGA+V PG + + G R PG
Sbjct: 823 QGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQG 882
Query: 394 ----VGVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGGVPG-------V 440
G+ G P +G+ PG G+ G PG GVPG+ GVPG G+PG +
Sbjct: 883 DLIFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAEL 942
Query: 441 GISPEAQ------------------AAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 482
G P Q K K G P A+ P
Sbjct: 943 GSLPIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRA 1002
Query: 483 GVAPGVGVA--PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPGGVAAAAKSA 536
A G PG +PG+ PG+ G PG+ +PG IGP G A S
Sbjct: 1003 EEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGS- 1061
Query: 537 AKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAK 596
G+PGL G+ GL G PG G PG PG L K
Sbjct: 1062 ----------------PGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPG-LPGIK 1104
Query: 597 AAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG 656
+ G G G G G+PG AGP + + G G G G
Sbjct: 1105 GERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPG-P 1163
Query: 657 VGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
G G PG G G PP A+ G+ G SP PG
Sbjct: 1164 PGPPGFPGKVGSPG-PPGPQAEKGSEGIRGPSGLPGSPGPPG 1204
Score = 102 bits (253), Expect = 2e-21
Identities = 217/757 (28%), Positives = 256/757 (33%), Gaps = 135/757 (17%)
Query: 17 LLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLG 76
L+S S G PG G+PG PG G GP G P P P G AG
Sbjct: 568 LVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGA 627
Query: 77 AGLGAFPAVTF-------------------------PGALVPGGVADAAA-AYKAAKAGA 110
G P PG +PG A K K A
Sbjct: 628 KGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDA 687
Query: 111 GLGGVPGVGGL----GVSAAPSVPGAVVPQPGAGVKPGKVPGV--------GLPGVYPGG 158
G G PG G G+S P V G P+ G P + G PG PG
Sbjct: 688 GNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPG-QPGP 746
Query: 159 VLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV-GPFGGPQPGV--PLGYPIK 214
G + P GVG PG P +P PGV G G+ GV G G P GV P G P
Sbjct: 747 --KGEQGPEGVG-RPGKPG----QPGLPGVQGP-PGLKGVQGEPGPPGRGVQGPQGEP-G 797
Query: 215 APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAAAA--AKAAAKF 271
AP LPG GLP G GP G GA G G TG VGP A+ + + +
Sbjct: 798 APGLPGIQGLPGPRGPP----GPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQG 853
Query: 272 GAGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVP 329
G G G G G PG + P G + G P A G++ P
Sbjct: 854 QTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWM--------GSSWQPGP 905
Query: 330 GGPGFGPGVVGVPGA-GVPGV-GVPGA-GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAA 386
GP PG+ G PG GVPG+ GVPG G+P PG ++P + K+
Sbjct: 906 QGP---PGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLP---IEQHLLKSICGDC 959
Query: 387 KYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVP-------------------- 426
G R P Y V G G GIPGV G+
Sbjct: 960 VQGQRAH------PGYLVEKGE-----KGDQGIPGVPGLDNCAQCFLSLERPRAEEARGD 1008
Query: 427 ---GVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVG 483
G G G G+PG P + + G P A +PG+
Sbjct: 1009 NSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQ 1068
Query: 484 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAK 542
G+ G PG PG PG PG+ PGI G G +A +
Sbjct: 1069 GERGLTGLTGDKGEPG---PPGQPGYPGATGPPGL---PGIKGERGYTGSAGEKGEPGPP 1122
Query: 543 AQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYG 601
+ GL G PG G G +G G G PGF PG K G
Sbjct: 1123 ----GSEGL-PGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPG 1177
Query: 602 AAVP-------GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 654
P G+ G G G G PG GPA K G G AG G
Sbjct: 1178 PPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPG 1237
Query: 655 LGVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPG 689
L +G G G G G+ P K G RPG
Sbjct: 1238 L-MGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPG 1273
Score = 100 bits (249), Expect = 5e-21
Identities = 146/455 (32%), Positives = 176/455 (38%), Gaps = 78/455 (17%)
Query: 25 RPG--GVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGL 79
+PG G PG P G PG V PG G A G G GP G P P P G G AGL
Sbjct: 1157 QPGFPGPPG--PPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGL 1214
Query: 80 GAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGG-LGVSAAPSVPGAVV 134
PG D A G G G PG+ G G P PG+
Sbjct: 1215 DGLDGKDGK----PGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGST- 1269
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG----- 189
+PGA +PG + G PG PG V P PG PG P AG+ A G+ G
Sbjct: 1270 GRPGAEGEPGAMGPQGRPGP-PGHVGP----PGP---PGQPGPAGIS--AVGLKGDRGAT 1319
Query: 190 ---AFAGIPGV-GPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLPYGYGPGGV 240
AG+PG GP G P P G A P G YG P G P G G
Sbjct: 1320 GERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGD-PGAAGQKGQ 1378
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGG 299
AG G+AG P G G A + G A PG G+ G+PGVPG++ +
Sbjct: 1379 AGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGA---PGPSGSPGLPGVPGSMGDMVN 1435
Query: 300 IAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA-GIP 357
+ + Y + P PG G PG G PG PGA G P
Sbjct: 1436 YDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGR--PGAPGSP 1493
Query: 358 VVPGA-------GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV----G 405
+PG G+PG +PG G + +G+G G+ G
Sbjct: 1494 GLPGQIGREGRQGLPGVRGLPGTK---------------GEKGDIGIGIAGENGLPGPPG 1538
Query: 406 AGGFPGFG-VGVGGIPGVAGVPGVGGVPGVGGVPG 439
G PG+G +G G G G+PG+ G PG G PG
Sbjct: 1539 PQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPG 1573
Score = 94.0 bits (232), Expect = 4e-19
Identities = 143/521 (27%), Positives = 176/521 (33%), Gaps = 103/521 (19%)
Query: 236 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 295
G G +GA G +G P TG Q K G G+ G G G PG I
Sbjct: 378 GEKGESGALGPSGLPGSTGEKGQ-----------KGEKGDGGIKGVPGKPGRDGRPGEIC 426
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG-PGVVGVPG----------- 343
IG G P A + G +PG PG G PG G PG
Sbjct: 427 VIGPKGQKGDPGFVGPEGLAGEPGPPG-----LPGPPGIGLPGTPGDPGGPPGPKGDKGS 481
Query: 344 AGVPGVGVPG-----------------------------AGIPVVPG-AGIPGAAVPGVV 373
+G+PG PG G+P PG G PG VP
Sbjct: 482 SGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARG 541
Query: 374 SP-------EAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVP 426
P E + ++ GA+ V G G G PGF G+ G+PG AGVP
Sbjct: 542 DPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTG----ASGDVGSPGF--GLPGLPGRAGVP 595
Query: 427 GVGGVPGVGGVPGVGISPEAQ---AAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVG 483
G+ G G G G SP A K AK P A + + +PG
Sbjct: 596 GLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPS 655
Query: 484 VAPGVGVAPGVGVAPGVGLA--------------PGVGVAPGVGVAPGVGVAPGI-GPGG 528
G PG G+ G A PG PG PG+ PG+ GP G
Sbjct: 656 GEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAG 715
Query: 529 VAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAV 588
+ A L+ AG PG G G G G PG G+PG
Sbjct: 716 --PKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQG-PEGVGRPGKPGQPGLPGVQGP 772
Query: 589 PGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVG 648
PG + G GV G G G G+PG + P K AQ G
Sbjct: 773 PGLKGV--QGEPGPPGRGVQGPQGEPGAPGLPG--IQGLPGPRGPPGPTGEKGAQ----G 824
Query: 649 AAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
+ G+ G G +G PG G PP + + G+ PG
Sbjct: 825 SPGVKG-ATGPVGPPGASVSG--PPGRDGQQGQTGLRGTPG 862
Score = 63.5 bits (153), Expect = 6e-10
Identities = 99/320 (30%), Positives = 113/320 (35%), Gaps = 73/320 (22%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGL----GALG----GGALGPGGKPLKPVPGGLAGAG 74
P PG V P G PG GL GA G G G G P P P G G
Sbjct: 1287 PGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTD 1346
Query: 75 LGAGLGAFPAVT-FPGALVPGGVADAAAAYKAAKAG----AGLGGVPGVGGLGVSAAPSV 129
AG P F G PG D AA + +AG AG+ G PG G P
Sbjct: 1347 GAAGKEGPPGKQGFYGP--PGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPG 1404
Query: 130 PGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVG-------------------- 169
P PGA PG GLPGV PG + + +
Sbjct: 1405 PAGERGHPGA---PGPSGSPGLPGV-PGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTS 1460
Query: 170 --VLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPK-----LPGGY 222
P A +P PG GA G PG PG P G P + + LPG
Sbjct: 1461 RMQFPMEMAAAPGRPGPPGKDGA-PGRPGA-------PGSP-GLPGQIGREGRQGLPGVR 1511
Query: 223 GLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGV 282
GLP T G+ G G+AG G G P GPQ G G G +
Sbjct: 1512 GLPGTKGE--KGDIGIGIAGENGLPGPP-----GPQGPP----------GYGKMGATGPM 1554
Query: 283 GGAGVPGVPGAIPGIGGIAG 302
G G+PG+PG PG G G
Sbjct: 1555 GQQGIPGIPGP-PGPMGQPG 1573
Score = 56.2 bits (134), Expect = 1e-07
Identities = 105/381 (27%), Positives = 132/381 (34%), Gaps = 75/381 (19%)
Query: 327 LVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVV--SPEAAAKAAAK 384
L P GP G G G+PG PG+ G GA V SP+A + A
Sbjct: 330 LAPSGPKGGKGERGLPGP-------PGS-------KGEKGARGNDCVRISPDAPLQCAE- 374
Query: 385 AAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G + G G +G G+PG G G G G GG+ GV P
Sbjct: 375 ----GPKGEKGESG--------------ALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKP 416
Query: 445 EAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAP 504
G K F G+ PG PG+ PG+GL P
Sbjct: 417 GRDGRP---------GEICVIGPKGQKGDPGFVGPEGLAGEPG---PPGLPGPPGIGL-P 463
Query: 505 GVGVAPGVGVAP-----GVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIP-GL 558
G PG P G+ GPGG K K + + +P G
Sbjct: 464 GTPGDPGGPPGPKGDKGSSGIPGKEGPGG------KPGKPGVKGEKGDPCEVCPTLPEGF 517
Query: 559 GVGVGVPGLGVGAGVPGLGVGA----GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGAL 614
VG+PG G PG V A G+ G G + ++ GA ++ GA
Sbjct: 518 QNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSSVVGA--QHLVSSTGAS 575
Query: 615 GGVGIPG-GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP- 672
G VG PG G+ G A K + FG G AG G G +G G+ G G P
Sbjct: 576 GDVGSPGFGLPGLPGRAGVPGLK--GEKGNFGEAGPAGSPG-PPGPVGPAGIKGAKGEPC 632
Query: 673 -PAAAAKAAKYG---VAARPG 689
P A + G V A PG
Sbjct: 633 EPCPALSNLQDGDVRVVALPG 653
Score = 44.7 bits (104), Expect = 3e-04
Identities = 61/200 (30%), Positives = 74/200 (37%), Gaps = 30/200 (15%)
Query: 500 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 559
V LAP G G G G+ PG G A +++ A L+ A G G G
Sbjct: 328 VTLAPS-GPKGGKGER-GLPGPPG-SKGEKGARGNDCVRISPDAPLQCAEG-PKGEKGES 383
Query: 560 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 619
+G GL G G G G VPG K + G PG + +G G G
Sbjct: 384 GALGPSGLPGSTGEKGQKGEKGDGGIKGVPG-----KPGRDGR--PGEICVIGPKGQKGD 436
Query: 620 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGIPPAAAAK 678
PG V GP GL G G GL G G+G+PG G G PP
Sbjct: 437 PGFV---GPE---------------GLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGD 478
Query: 679 AAKYGVAARPGFGLSPIFPG 698
G+ + G G P PG
Sbjct: 479 KGSSGIPGKEGPGGKPGKPG 498
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 139 bits (349), Expect = 1e-32
Identities = 225/769 (29%), Positives = 276/769 (35%), Gaps = 166/769 (21%)
Query: 11 PGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGA----GLGALGGGALGPGGKPLKPV 66
PG ++ S+ +P P G+ G + G PGG G GL A G +GP G P P
Sbjct: 453 PGSSVIYCSVGNPG-PQGIKGKV--GPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPG 509
Query: 67 PGGLAG-AGLGAGLGAFPAVTFPGALVPGGV-----ADAAAAYKAAKAGAGLGGVPG-VG 119
G G GL LG PGA P G+ A K AK + V G G
Sbjct: 510 RQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKG 569
Query: 120 GLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGG---VLPGAR-FPGVGVLPGVP 175
G P PG QPG+ + G G PG PG PG + FPG P P
Sbjct: 570 ERGPDGPPGFPG----QPGSHGRDGHAGEKGDPGP-PGDHEDATPGGKGFPG----PLGP 620
Query: 176 TGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPK-LPGGYGLPYTTG-KLP 232
G PG+G F G PG PGVP G+P ++ P L G G + P
Sbjct: 621 PGKAGPVGPPGLG--FPGPPGERG----HPGVP-GHPGVRGPDGLKGQKGDTISCNVTYP 673
Query: 233 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
+GP G G G G+P GPQ A + K G G A +PG PG
Sbjct: 674 GRHGPPGFDGPPGPKGFP-----GPQGAPGLSGSDGHKGRPGTPGT------AEIPGPPG 722
Query: 293 -----AIPGIGGIAG---VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG- 343
PG GG G VG P + + +PG P FG +G PG
Sbjct: 723 FRGDMGDPGFGGEKGSSPVGPPGPPGSPGVNGQKG--------IPGDPAFGH--LGPPGK 772
Query: 344 ---AGVPGVGVPGAGIPVVPGA----GIPG-------------AAVPGVVSPEAAAKAAA 383
+GVPG+ P G P PGA GIPG A PGV P
Sbjct: 773 RGLSGVPGIKGP-RGDPGCPGAEGPAGIPGFLGLKGPKGREGHAGFPGVPGPPG------ 825
Query: 384 KAAKYGARPGV-GVGGIPTYGVGAGGFPGFG----------VGVGGIPGVAGVPGVGGVP 432
+ + GA PG+ G G+P Y G G G G+ G+PG+ G PG G P
Sbjct: 826 HSCERGA-PGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPP 884
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYG-VGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVA 491
G+ G+PG +G G P K F PG PG
Sbjct: 885 GLPGIPG----------------PFGDDGLPGPPGPKGPRGLPGFPGFPGERGKPGAEGC 928
Query: 492 PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGL 551
PG PG G+ G+ A G IGP G ++A +Q
Sbjct: 929 PGAKGEPGEKGMSGLPGDRGLRGAKG-----AIGPPG------DEGEMAIISQKGTPGEP 977
Query: 552 GA----GIPGLGVGVGVPGLGVGAGVPGL----GVGAGVPGFGAVPG-----ALAAAKAA 598
G G PG G PG+ G PG G G PG PG +
Sbjct: 978 GPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGL 1037
Query: 599 KYGAAVPGVLGGLGALGGVGIPG--GVVGA--------------GPAAAAAAAKAAAKAA 642
+ PG+ G G G G PG G+ GA GP +
Sbjct: 1038 RGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPGCPG 1097
Query: 643 QFGLVGAAGLGGL--GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
FG G GL G+ G G PG G G PP G+ +PG
Sbjct: 1098 HFGASGEQGLPGIQGPRGSPGRPGPPGSSG-PPGCPGDHGMPGLRGQPG 1145
Score = 134 bits (338), Expect = 2e-31
Identities = 234/794 (29%), Positives = 275/794 (34%), Gaps = 148/794 (18%)
Query: 22 HPSRPG--GVPGAIP-GGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAG---L 75
HP PG G PG G G +PG G GALGPGG P G G L
Sbjct: 126 HPGPPGPRGKPGMSGHNGSRGDPGFPG------GRGALGPGGPLGHPGEKGEKGNSVFIL 179
Query: 76 GAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAVV 134
GA G PG +PG A AG G PG GL G P PG +
Sbjct: 180 GAVKGIQGDRGDPG--LPG-----LPGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPG-LK 231
Query: 135 PQPGAGVK-----PGKVPGVGLPG-----------VYPG--GVLPGARFPGVGVLPGVP- 175
PG GVK PG+V G PG +Y G G+ PG+ LPG P
Sbjct: 232 GNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGI---KGIPGMVGLPGPPG 288
Query: 176 ----TGAGVK--------------------PKAPGVGG--AFAGIPG----VGPFGGP-- 203
+G G K P PG+ G G PG +GP G P
Sbjct: 289 RKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFPGLKGELGLVGDPGLFGLIGPKGDPGN 348
Query: 204 -----QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQ 258
PGV + P+ PG G P G+ GP G G G+ G +GP
Sbjct: 349 RGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETG-DVGPPGPPGLLGRPGEACAGMIGPP 407
Query: 259 AAAAAAAKAAAKFGAGAAG---VLPG-VGGAGVPGVPGAIPGIGGIAG-------VGTPA 307
AG G PG G G PG+PGA PG+ G+ G VG P
Sbjct: 408 GPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGA-PGLQGLPGSSVIYCSVGNPG 466
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGP-------GFGPGVVGVPG-AGVPG-------VGVP 352
K G G P G PG +G PG G+PG +G+P
Sbjct: 467 PQGI------KGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLP 520
Query: 353 G----AGIPVVPGA----GIPG----AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP 400
G G P PGA G+PG + PG + + G R G G P
Sbjct: 521 GWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGERGPDGPPGFP 580
Query: 401 ----TYG----VGAGGFPG-FGVGVGGIPGVAGVPGVGGVPGVG---GVPGVGI-SPEAQ 447
++G G G PG G PG G PG G PG G PG+G P +
Sbjct: 581 GQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGFPGPPGE 640
Query: 448 AAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVG 507
GV P + + PG PG PG PG APG+
Sbjct: 641 RGHPGVPGHPGVRGPDGLKGQKGDTISCNVTYPGRHGPPGFDGPPGPKGFPGPQGAPGLS 700
Query: 508 VAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPG 566
+ G PG G A GP G K G PG+ G+PG
Sbjct: 701 GSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPG 760
Query: 567 LGV--GAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVV 624
G PG +GVPG P A+ A +PG LG G G G G
Sbjct: 761 DPAFGHLGPPGKRGLSGVPGIKG-PRGDPGCPGAEGPAGIPGFLGLKGPKGREGHAGFPG 819
Query: 625 GAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGV 684
GP + A Q GL G G G GG G PG G PP A G+
Sbjct: 820 VPGPPGHSCERGAPGIPGQPGLPGYPGSPG-APGGKGQPGDVG----PPGPAGMKGLPGL 874
Query: 685 AARPGFGLSPIFPG 698
RPG P PG
Sbjct: 875 PGRPGAHGPPGLPG 888
Score = 134 bits (336), Expect = 4e-31
Identities = 237/831 (28%), Positives = 290/831 (34%), Gaps = 198/831 (23%)
Query: 22 HPSRPGG------VPGAIPG-----GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGL 70
HP G + GA+ G G PG PG+ GA GG GP G P +P G
Sbjct: 165 HPGEKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGSW-GA--GGPAGPTGYPGEPGLVGP 221
Query: 71 AGAGLGAGLGAFPAVTFPGAL-VPGGVADAAA-------------AYKAAKAGAGLGGVP 116
G GL P V G + PG V + YK K G+ G+
Sbjct: 222 PGQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMV 281
Query: 117 GV---------GGLGVSAAPSVPGAVVPQ--PGAGVKPGKVPG-------VGLPGVY--- 155
G+ G+G +PG P+ PG+ PG PG VG PG++
Sbjct: 282 GLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPG-FPGLKGELGLVGDPGLFGLI 340
Query: 156 -PGGVLPGARF----PGVGVLPGVP----------------TGAGVKPKAPGV----GGA 190
P G PG R PGV V P +P TG P PG+ G A
Sbjct: 341 GPKGD-PGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEA 399
Query: 191 FAGIPG-VGPFGGP-QPGVP-----LGYPIKAPKLPGGYGLPYTTGK-----LP------ 232
AG+ G GP G P PG+P G P AP PG G P G LP
Sbjct: 400 CAGMIGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVIY 459
Query: 233 YGYGPGGVAGAAGKAGYPTGTG-----------------VGPQAAAAAAAKAAAKFGAGA 275
G G G GK G P G G +GP + +K G
Sbjct: 460 CSVGNPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGL 519
Query: 276 AGVL-----PGVGGA-GVPGVPG-----AIPGIGGIAG-------------------VGT 305
G L PG GA G PG+PG PG G G G
Sbjct: 520 PGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGERGPDGPPGF 579
Query: 306 PAAAAAAAAAAKAAKYGAAA------GLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVV 359
P + A + G PGG GF PG +G PG P VG PG G P
Sbjct: 580 PGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGF-PGPLGPPGKAGP-VGPPGLGFPGP 637
Query: 360 PG----AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG-- 413
PG G+PG PGV P+ + G + TY G G PGF
Sbjct: 638 PGERGHPGVPGH--PGVRGPDGLK----------GQKGDTISCNVTY-PGRHGPPGFDGP 684
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKA 473
G G PG G PG+ G G G PG +P + +G P K ++
Sbjct: 685 PGPKGFPGPQGAPGLSGSDGHKGRPG---TPGTAEIPGPPGFRGDMGDPGFGGEKGSSPV 741
Query: 474 AQFGLVPGVGVAPGVGVAPGVGVAPGVG-LAP----GVGVAPGVGVAPGVGVAPGI-GPG 527
PG +PGV G+ P G L P G+ PG+ G PG GP
Sbjct: 742 GP----PGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPA 797
Query: 528 GVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA 587
G+ K + A G PG G PG+ G+PG G PG
Sbjct: 798 GIPGFL--GLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPGAPGGKG 855
Query: 588 VPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--------GVVG-AGPAAAAAAAKAA 638
PG + A +PG+ G GA G G+PG G+ G GP
Sbjct: 856 QPGDVGPPGPAGM-KGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPGPPGPKGPRGLPGFP 914
Query: 639 AKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
+ G GA G G G PG G+ G+P + AK G PG
Sbjct: 915 GFPGERGKPGAEGC----PGAKGEPGEKGMSGLPGDRGLRGAK-GAIGPPG 960
Score = 132 bits (333), Expect = 8e-31
Identities = 231/784 (29%), Positives = 273/784 (34%), Gaps = 159/784 (20%)
Query: 22 HPSRPGGVPGA--IPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKP-------VPGGL 70
H RPG PG IPG G G + PG G G G +GP G P P +PG
Sbjct: 705 HKGRPG-TPGTAEIPGPPGFRGDMGDPGFG-GEKGSSPVGPPGPPGSPGVNGQKGIPGDP 762
Query: 71 AGAGLGA----GLGAFPAVT-------FPGALVPGGVAD--AAAAYKAAKAGAGLGGVPG 117
A LG GL P + PGA P G+ K + AG GVPG
Sbjct: 763 AFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPGFLGLKGPKGREGHAGFPGVPG 822
Query: 118 VGGLGVS-AAPSVPGAVVPQPGAGVKPGKVPGVGLPG-VYPGGVLPGARFPGVGVLPGVP 175
G AP +PG PG PG G G PG V P G PG LPG P
Sbjct: 823 PPGHSCERGAPGIPGQP-GLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPG---LPGRP 878
Query: 176 TGAGVKPKAPGVGGAFA--GIPGVGPFGGPQ--PGVPLGYPIKAPKLPGGYGLPYTTGK- 230
GA P PG+ G F G+PG GP+ PG P G+P + K PG G P G+
Sbjct: 879 -GAHGPPGLPGIPGPFGDDGLPGPPGPKGPRGLPGFP-GFPGERGK-PGAEGCPGAKGEP 935
Query: 231 -------LPYGYGPGGVAGAAGKAGYPTGTGV-------------GPQAAAAAAAKAAAK 270
LP G G+ GA G G P G GP + K
Sbjct: 936 GEKGMSGLP---GDRGLRGAKGAIGPPGDEGEMAIISQKGTPGEPGPPGDDGFPGERGDK 992
Query: 271 -------------------FGAGAAGVLPGVGGAGVPGVPGA--------IPGIGGIAGV 303
F G G G G PG PG+ PG+ G G
Sbjct: 993 GTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGE 1052
Query: 304 -GTPA----AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-------AGVPGVGV 351
G+P + A K K A+ P GP PG G PG G+PG+
Sbjct: 1053 PGSPGPPGFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGIQG 1112
Query: 352 P--GAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP-TYGV-GA 406
P G P PG+ G PG PG + G R G GIP G+ G
Sbjct: 1113 PRGSPGRPGPPGSSGPPGC--PGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGP 1170
Query: 407 GGFPGFGVGVGGIPGVAGVPGVGGV-----PGVGGVPGV----------GISP---EAQA 448
G PG G+ G+ G G G G+ PG G+PG+ GISP +
Sbjct: 1171 SGSPGLN-GLHGLKGQKGTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISPPGPRGKK 1229
Query: 449 AAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGV-GLAPGVG 507
G PA A +A G PG PG G PG+ G +
Sbjct: 1230 GPPGPPGSSGPPGPAGATGRAPKDIPDPG-PPGDQGPPGPDGPRGAPGPPGLPGSVDLLR 1288
Query: 508 VAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVP 565
PG PG PG GP G K K + G G PG G+P
Sbjct: 1289 GEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLP 1348
Query: 566 GLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVG 625
G PG G+PG PG A +PG G G G +G+PG
Sbjct: 1349 G------PPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGAMGLPGMRGP 1402
Query: 626 AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVA 685
+GP G G GL G GV GV G G PP + G
Sbjct: 1403 SGP----------------GCKGEPGLD----GRRGVDGVPGSPG-PPGRKGDTGEDGYP 1441
Query: 686 ARPG 689
PG
Sbjct: 1442 GGPG 1445
Score = 125 bits (315), Expect = 1e-28
Identities = 202/670 (30%), Positives = 233/670 (34%), Gaps = 125/670 (18%)
Query: 23 PSRPG--GVPGAIPG-GVPGGVFYPG-AGLGALGG-----GALGPGGKPLKPVPGGLAGA 73
P PG G PGA G G PG V PG AG+ L G GA GP G P +PG
Sbjct: 839 PGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLP--GIPGPFGDD 896
Query: 74 GLGA--------GLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVS 124
GL GL FP FPG G A+ K G+ G+PG GL G
Sbjct: 897 GLPGPPGPKGPRGLPGFPG--FPGERGKPG-AEGCPGAKGEPGEKGMSGLPGDRGLRGAK 953
Query: 125 AAPSVPG-----AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAG 179
A PG A++ Q G +PG G PG PG + G
Sbjct: 954 GAIGPPGDEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTPGMQ------------GRR 1001
Query: 180 VKPKAPGVGGAFAGIPGV----GPFGGPQPGVPLGYP--IKAPKLPGGYGLPYTTGKLPY 233
+P G G G PG GP G P P G I P LPG G P + G P
Sbjct: 1002 GEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPG--PP 1059
Query: 234 GY-GPGGVAGAAGKAGYPTGT--GVGPQAAAAAAAKAAAKFGAGAAGVLPGV----GGAG 286
G+ G G G G G P GP+ + FGA LPG+ G G
Sbjct: 1060 GFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPG-CPGHFGASGEQGLPGIQGPRGSPG 1118
Query: 287 VPGVPGA-----IPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVG 340
PG PG+ PG G+ G+ G P G GP PG+ G
Sbjct: 1119 RPGPPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNG 1178
Query: 341 VPG---------------AGVPG-VGVPGA----GIPVVPGAGIPGA-------AVPGVV 373
+ G G PG VG+PG G P PG PG PG
Sbjct: 1179 LHGLKGQKGTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSS 1238
Query: 374 SPEAAAKAAAKAAKYGARPGV-------GVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVP 426
P A A +A K PG G G P G G PG + G PG G+P
Sbjct: 1239 GPPGPAGATGRAPKDIPDPGPPGDQGPPGPDG-PRGAPGPPGLPGSVDLLRGEPGDCGLP 1297
Query: 427 GVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAP 486
G G PG G PG P K VG P F PG P
Sbjct: 1298 GPPGPPGPPGPPGYKGFPGCDGKDGQKGP---VGFPGPQGPHG------FPGPPGEKGLP 1348
Query: 487 GVGVAPGVGVAPGVGLAPG----VGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAA 541
G G PG PG V P + PG+ APG+ GP G
Sbjct: 1349 GPPGRKGPTGLPGPRGEPGPPADVDDCPRI---PGLPGAPGMRGPEGAMGL--------- 1396
Query: 542 KAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
+R +G G G PGL GV G+ G PG G G+ PG
Sbjct: 1397 -PGMRGPSGPGCKGEPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGPGPPGPIGDPGP 1455
Query: 601 GAAVPGVLGG 610
PG LGG
Sbjct: 1456 KGFGPGYLGG 1465
Score = 111 bits (277), Expect = 3e-24
Identities = 208/712 (29%), Positives = 247/712 (34%), Gaps = 131/712 (18%)
Query: 28 GVPGAI-------PGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAG 78
G PGA P GVPG +PG L + G G GP GKP G++G G
Sbjct: 98 GPPGAAGDKGDKGPTGVPG---FPG--LDGIPGHPGPPGPRGKP------GMSGHNGSRG 146
Query: 79 LGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG-----LGGVPGV-GGLGVSAAPSVPGA 132
FP GAL PGG + K G LG V G+ G G P +PG+
Sbjct: 147 DPGFPGGR--GALGPGG----PLGHPGEKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGS 200
Query: 133 VVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVG-GAF 191
GAG G P YPG PG+ PG P G+K PGVG
Sbjct: 201 W----GAGGPAG-------PTGYPGE-------PGLVGPPGQPGRPGLKGN-PGVGVKGQ 241
Query: 192 AGIPG-VGPFGGPQPGVPLGYP----IKAPK----LPGGYGLPYTTGKLPYGYGPGGVAG 242
G PG VG G P P + + P K K +PG GLP G+ G G G
Sbjct: 242 MGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMVGLPGPPGRK--GESGIGAKG 299
Query: 243 AAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 302
G G+P GP+ + G G L VG G+ G+ G G
Sbjct: 300 EKGIPGFP-----GPRGDPGSYGSPGFP---GLKGELGLVGDPGLFGLIGPKGDPGNRGH 351
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGA 362
G P K PG PGF PG G G VG PG PG
Sbjct: 352 PGPPGVLVTPPLPLKGP---------PGDPGF-PGRYGETG----DVGPPGP-----PGL 392
Query: 363 -GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPG 421
G PG A G++ P G + G+ G+P G G PG G PG
Sbjct: 393 LGRPGEACAGMIGPP------------GPQGFPGLPGLP----GEAGIPGRPDSAPGKPG 436
Query: 422 VAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKA-AAKAAQFGLVP 480
G PG+ G PG+ G+PG + + + K VG P K P
Sbjct: 437 KPGSPGLPGAPGLQGLPGSSVIYCSVGNPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEP 496
Query: 481 GVGVAPGVGVAPG-VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV 539
G PG PG G +GL +G G PG PG+ PG A+ K
Sbjct: 497 GPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPG-PPGAEGPPGL-PGKHGASGPPGNK- 553
Query: 540 AAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 599
AK + G G G PG G G AG G PG A
Sbjct: 554 GAKGDM--VVSRVKGHKGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPG--DHEDATP 609
Query: 600 YGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGV-- 657
G PG LG G G VG P G+ GP G G G G +
Sbjct: 610 GGKGFPGPLGPPGKAGPVG-PPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQKGDTISC 668
Query: 658 -----------GGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 698
G G PG G G P A + G RPG + PG
Sbjct: 669 NVTYPGRHGPPGFDGPPGPKGFPG-PQGAPGLSGSDGHKGRPGTPGTAEIPG 719
Score = 92.4 bits (228), Expect = 1e-18
Identities = 129/434 (29%), Positives = 159/434 (36%), Gaps = 69/434 (15%)
Query: 279 LPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL----VPGGPGF 334
+P G G PG PG IG + G + GAA G PGF
Sbjct: 58 VPEKGSRGPPGPPGPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGF 117
Query: 335 GPGVVGVPG-AGVPGV-GVPG----------AGIPVVPGAGIPGAAV--PGVVSPEAAAK 380
PG+ G+PG G PG G PG G P GA PG + PG + +
Sbjct: 118 -PGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEKGEKGNSV 176
Query: 381 AAAKAAK--YGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVP 438
A K G R G+ G+P GAGG P G G PG+ G PG G PG+ G P
Sbjct: 177 FILGAVKGIQGDRGDPGLPGLPG-SWGAGG-PAGPTGYPGEPGLVGPPGQPGRPGLKGNP 234
Query: 439 GVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAP 498
GVG+ + VG + + F L G G+ PG+ P
Sbjct: 235 GVGVKGQMGDPGE-------VGQQGSPGPTLLVEPPDFCLYKG---EKGIKGIPGMVGLP 284
Query: 499 GVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGL 558
G PG G+G G+ GP G + S K +L GL G PGL
Sbjct: 285 G---PPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFPGLKGEL----GL-VGDPGL 336
Query: 559 GVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG-AAVPGVLGGLGALGGV 617
+G G G PG PG L G PG G G G V
Sbjct: 337 FGLIGPKGDPGNRGHPG------------PPGVLVTPPLPLKGPPGDPGFPGRYGETGDV 384
Query: 618 GIPG--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAA 675
G PG G++G A A G++G G G G G+PG G+ G P +A
Sbjct: 385 GPPGPPGLLGRPGEACA------------GMIGPPGPQGF-PGLPGLPGEAGIPGRPDSA 431
Query: 676 AAKAAKYGVAARPG 689
K K G PG
Sbjct: 432 PGKPGKPGSPGLPG 445
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.143 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,524,015
Number of Sequences: 37866
Number of extensions: 3069825
Number of successful extensions: 62202
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 1005
Number of HSP's that attempted gapping in prelim test: 14651
Number of HSP's gapped (non-prelim): 13960
length of query: 711
length of database: 18,247,518
effective HSP length: 109
effective length of query: 602
effective length of database: 14,120,124
effective search space: 8500314648
effective search space used: 8500314648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.