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Search of human proteins with 126352322
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|126352322 elastin isoform c precursor [Homo sapiens]
(692 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|126352322 elastin isoform c precursor [Homo sapiens] 1386 0.0
gi|126352446 elastin isoform d precursor [Homo sapiens] 1375 0.0
gi|126352608 elastin isoform e precursor [Homo sapiens] 1359 0.0
gi|126352440 elastin isoform a precursor [Homo sapiens] 1347 0.0
gi|126352700 elastin isoform b precursor [Homo sapiens] 1342 0.0
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 184 2e-46
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 175 1e-43
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 173 5e-43
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 167 2e-41
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 167 2e-41
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 167 2e-41
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 167 2e-41
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 165 1e-40
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 165 1e-40
gi|48762934 alpha 2 type I collagen [Homo sapiens] 162 1e-39
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 155 2e-37
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ... 153 6e-37
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s... 153 6e-37
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 149 8e-36
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 149 1e-35
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 149 1e-35
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 147 2e-35
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 146 7e-35
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens] 145 9e-35
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 144 2e-34
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 144 4e-34
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 140 3e-33
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 140 5e-33
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 138 2e-32
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 138 2e-32
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 1386 bits (3588), Expect = 0.0
Identities = 692/692 (100%), Positives = 692/692 (100%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG
Sbjct: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 480
Query: 481 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG
Sbjct: 481 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
Query: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 600
VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI
Sbjct: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 600
Query: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA
Sbjct: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
Query: 661 AKYGVAARPGFGLSPIFPGGACLGKACGRKRK 692
AKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 661 AKYGVAARPGFGLSPIFPGGACLGKACGRKRK 692
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 1375 bits (3558), Expect = 0.0
Identities = 692/711 (97%), Positives = 692/711 (97%), Gaps = 19/711 (2%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-------------------GLVP 461
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY GLVP
Sbjct: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 480
Query: 462 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 521
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 481 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 540
Query: 522 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 581
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 541 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
Query: 582 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 641
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
Query: 642 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 692
GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 661 GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACGRKRK 711
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 1359 bits (3517), Expect = 0.0
Identities = 687/710 (96%), Positives = 687/710 (96%), Gaps = 23/710 (3%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 175
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 176 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 235
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 236 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 295
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 296 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 355
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 356 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 415
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG
Sbjct: 416 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 475
Query: 481 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG
Sbjct: 476 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 535
Query: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 600
VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI
Sbjct: 536 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 595
Query: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA
Sbjct: 596 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 655
Query: 661 AKY------------------GVAARPGFGLSPIFPGGACLGKACGRKRK 692
AKY GVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 656 AKYGAAGLGGVLGGAGQFPLGGVAARPGFGLSPIFPGGACLGKACGRKRK 705
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 1347 bits (3487), Expect = 0.0
Identities = 687/729 (94%), Positives = 687/729 (94%), Gaps = 42/729 (5%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 121 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 175
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 176 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 235
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 236 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 295
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 296 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 355
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 356 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 415
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY-------------------GLVP 461
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY GLVP
Sbjct: 416 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVP 475
Query: 462 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 521
GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA
Sbjct: 476 GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVA 535
Query: 522 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 581
AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY
Sbjct: 536 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 595
Query: 582 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 641
GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL
Sbjct: 596 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 655
Query: 642 GVPGVGGLGGIPPAAAAKAAKY------------------GVAARPGFGLSPIFPGGACL 683
GVPGVGGLGGIPPAAAAKAAKY GVAARPGFGLSPIFPGGACL
Sbjct: 656 GVPGVGGLGGIPPAAAAKAAKYGAAGLGGVLGGAGQFPLGGVAARPGFGLSPIFPGGACL 715
Query: 684 GKACGRKRK 692
GKACGRKRK
Sbjct: 716 GKACGRKRK 724
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 1342 bits (3473), Expect = 0.0
Identities = 677/692 (97%), Positives = 677/692 (97%), Gaps = 15/692 (2%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG 60
MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP ALGPGG
Sbjct: 1 MAGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYP----------ALGPGG 50
Query: 61 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 120
KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG
Sbjct: 51 KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG 110
Query: 121 LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 180
LGVSA GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV
Sbjct: 111 LGVSA-----GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGV 165
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV
Sbjct: 166 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 225
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI
Sbjct: 226 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 285
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP
Sbjct: 286 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 345
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 420
GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP
Sbjct: 346 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIP 405
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 480
GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG
Sbjct: 406 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 465
Query: 481 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG
Sbjct: 466 VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 525
Query: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 600
VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI
Sbjct: 526 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 585
Query: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA
Sbjct: 586 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 645
Query: 661 AKYGVAARPGFGLSPIFPGGACLGKACGRKRK 692
AKYGVAARPGFGLSPIFPGGACLGKACGRKRK
Sbjct: 646 AKYGVAARPGFGLSPIFPGGACLGKACGRKRK 677
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 184 bits (468), Expect = 2e-46
Identities = 239/719 (33%), Positives = 260/719 (36%), Gaps = 112/719 (15%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALG---------- 52
G T AA PG P+ P G PGA+ G P G G
Sbjct: 326 GATGAAGPPGPT-------GPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGP 378
Query: 53 GGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGL 112
GA GP G P G GA G+ P FPGA P G G
Sbjct: 379 AGAAGPAGNPGADGQPGAKGANGAPGIAGAPG--FPGARGPSGPQ-------------GP 423
Query: 113 GGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARF-PGVGVL 171
GG PG G S P PG+ GA +PG V G PG GAR PG L
Sbjct: 424 GGPPGPKGN--SGEPGAPGSK-GDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGL 480
Query: 172 PGVPTGAGVKPKAPGVGGAFAGIPGV-------GPFGGPQPGVPLGYPIKAPKLPGGYGL 224
PG P G PG G F G GV G G P P P G P +A + PG GL
Sbjct: 481 PGPPGERG----GPGSRG-FPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGR-PGEAGL 534
Query: 225 PYTTGKL--PYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPG 281
P G P GP G G G AG G GP A A GAAG
Sbjct: 535 PGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGK 594
Query: 282 VGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVV 339
G GVPG PGA+ G G A A + + G A G PGF PG
Sbjct: 595 AGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPA-----GSPGFQGLPGPA 649
Query: 340 GVPG-AGVPGV-GVPG-AGIPVVPGA----GIPGA-AVPGVVSPEAAAKAAAKAAKYGAR 391
G PG AG PG GVPG G P GA G PG V G P A GA+
Sbjct: 650 GPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAK 709
Query: 392 PGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAA 451
G G P G+ G PG G+ G G AG+PG G G G G SP
Sbjct: 710 GDAGAPGAP----GSQGAPGLQ-GMPGERGAAGLPGPKGDRGDAGPKGADGSP------- 757
Query: 452 AKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGV 510
K GL +G PG APG G G A G APG PG GP G
Sbjct: 758 GKDGVRGLTGPIG-PPGPAGAPGDKGESGPSGPAGPTGARG---APGDRGEPGPPGPAGF 813
Query: 511 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 570
A + + AK + A G G PG AG PG G PG
Sbjct: 814 AGPPGADGQPGAKGEPGDAGAKG--------DAGPPGPAGPAGPPGPIGNVGAPG----- 860
Query: 571 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGA 630
AK A+ A PG G GA G VG PG AGP A G G
Sbjct: 861 -----AKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGP 915
Query: 631 AGL-GGLG-------VGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 679
AG G +G G G PG G G P P A + GV PG FPG
Sbjct: 916 AGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG 974
Score = 166 bits (421), Expect = 5e-41
Identities = 219/658 (33%), Positives = 248/658 (37%), Gaps = 67/658 (10%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAG-----AGLGA 77
P P G PG G+PG PG P G P P P GL G G
Sbjct: 122 PRGPAGPPGR--DGIPGQPGLPG------------PPGPPGPPGPPGLGGNFAPQLSYGY 167
Query: 78 GLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQP 137
+ ++ PG + P G A G G PG G ++ P P P
Sbjct: 168 DEKSTGGISVPGPMGPSGPRGLPGP-PGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPP 226
Query: 138 GAGVKPGKVPGVGLPGVY-PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG 196
G G+ G PG P G PG LPG+ G G+ GA
Sbjct: 227 GKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFS----GLDGAKGDAGP 282
Query: 197 VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVA---GAAGKAGYPTGT 253
GP G +PG P AP G GLP G+ P GP G GA G AG P T
Sbjct: 283 AGPKG--EPGSP--GENGAPGQMGPRGLPGERGR-PGAPGPAGARGNDGATGAAGPPGPT 337
Query: 254 GVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAA 313
GP AK AG G G GV G PG PG G AG PA A
Sbjct: 338 --GPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGP-PGPAGAAG---PAGNPGAD 391
Query: 314 AAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG----AGIPVVPGA-GIPGA- 367
A A G + G PGF PG G G PG G PG +G P PG+ G GA
Sbjct: 392 GQPGAKGANGAPG-IAGAPGF-PGARGPSGPQGPG-GPPGPKGNSGEPGAPGSKGDTGAK 448
Query: 368 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 427
PG V + A + K GAR G G+P G G G G G G PG GV G
Sbjct: 449 GEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLP----GPPGERG-GPGSRGFPGADGVAG 503
Query: 428 VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGV 487
G G G PG P+ A + + GL PG G +PG G G
Sbjct: 504 PKGPAGERGSPGPA-GPKGSPGEAGRPGEAGL-PGAKGLTGSPGSPGPDGKTGPPGPAGQ 561
Query: 488 GVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGV 545
PG PG G A +G G AA K + +G AG G G
Sbjct: 562 DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGP 621
Query: 546 PGLGVGAGVPGLGVGAGVPGFGAVPG-ALAAAKAAKYG-AAVPGVLGG---LGALGGVGI 600
PG AG G AG PGF +PG A +A K G VPG LG GA G G
Sbjct: 622 PGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGF 681
Query: 601 PG--GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGL-GGLGVGGL-GVPGVGGLGGIP 653
PG GV G GPA A A G GA G G G GL G+PG G G+P
Sbjct: 682 PGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLP 739
Score = 156 bits (395), Expect = 5e-38
Identities = 229/746 (30%), Positives = 263/746 (35%), Gaps = 127/746 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA--GLGALGG-------GALGPGGKPLK------PVP 67
P PGG PG P G G PG+ GA G G GP G+ K P P
Sbjct: 420 PQGPGGPPG--PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGP 477
Query: 68 GGLAGAGL---GAGLGAFPAVTFPGALVPGGVADAAAAYKAA--KAGAGLGGVPGVGGL- 121
GL G G G FP G P G A + A K G G PG GL
Sbjct: 478 TGLPGPPGERGGPGSRGFPGAD--GVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535
Query: 122 GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGAR-------FPGVGVLPGV 174
G PG+ P G PG G PG PG PGAR FPG G
Sbjct: 536 GAKGLTGSPGSPGPDGKTG-PPGPAGQDGRPGP-PGP--PGARGQAGVMGFPGPKGAAGE 591
Query: 175 PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPLGY-----PIKAPK---LPGGYGL 224
P AG + P PG G G G P P P G P +P LPG G
Sbjct: 592 PGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 651
Query: 225 PYTTGK-----LPYGYGPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKFG 272
P GK +P G G +GA G+ G+P GV GP+ A A AK
Sbjct: 652 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGD 711
Query: 273 AGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL 327
AGA G G G+ G+PG +PG G G P A + K G +
Sbjct: 712 AGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPG--KDGVRGLTGPI 769
Query: 328 VPGGPGFGPGVVGVPGA----------GVPG----VGVPG-AGIPVVPGA-------GIP 365
P GP PG G G G PG G PG AG PGA G P
Sbjct: 770 GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 366 G-------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGG 418
G A PG P GA+ G G P GA GFPG G G
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP----GATGFPG-AAGRVG 884
Query: 419 IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVA 478
PG +G G G PG G G G P + A + + G PG G +PG A
Sbjct: 885 PPGPSGNAGPPGPPGPAGKEG-GKGPRGETGPAGRPGEVG-PPGPPGPAGEKGSPG---A 939
Query: 479 PGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIP 537
G APG G+ GV PG G G + + + A+ G P
Sbjct: 940 DGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGP 999
Query: 538 GLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGG 597
+G PGL AG PG G PG PG + AK G G GA G
Sbjct: 1000 -----MGPPGL---AGPPGESGREGAPGAEGSPGR-DGSPGAKGDRGETGPAGPPGAPGA 1050
Query: 598 VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-----------GVGGLGVPGV 646
G PG V AG + A A G VGA G G G G+ G
Sbjct: 1051 PGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGH 1110
Query: 647 GGLGGI--PPAAAAKAAKYGVAARPG 670
G G+ PP + G + G
Sbjct: 1111 RGFSGLQGPPGPPGSPGEQGPSGASG 1136
Score = 155 bits (393), Expect = 9e-38
Identities = 217/693 (31%), Positives = 248/693 (35%), Gaps = 100/693 (14%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--------GALGPGGKPLKPVPGGLAGA 73
P+ P G PG G PG PGA GL G G GP G+ +P P G GA
Sbjct: 516 PAGPKGSPGE--AGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGA 573
Query: 74 GLGAGLGAFP----AVTFPGAL----VPGGVADAAAAYKAAKAGAGLGGVPGVGG----- 120
AG+ FP A PG VPG A K +AGA G PG G
Sbjct: 574 RGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQ--GPPGPAGPAGER 631
Query: 121 --LGVSAAPSVPGAVVPQ--PGAGVKPGK--VPG-VGLPGVYPGGVLPGARFPGVGVLPG 173
G + +P G P PG KPG+ VPG +G PG P G FPG + G
Sbjct: 632 GEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG--PSGARGERGFPGERGVQG 689
Query: 174 VPTGAGVKPK--APGVGGAF--AGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTG 229
P AG + APG GA AG PG P PG+ P G GLP G
Sbjct: 690 PPGPAGPRGANGAPGNDGAKGDAGAPGA-PGSQGAPGLQ-----GMPGERGAAGLPGPKG 743
Query: 230 KLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 288
GP G G+ GK G TG +GP A A +G AG G G
Sbjct: 744 DRGDA-GPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDR 802
Query: 289 GVPGAIPGIGGIAGV----GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA 344
G PG PG G AG G P A A G P GP G VG PGA
Sbjct: 803 GEPGP-PGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGA 861
Query: 345 -------GVPGV-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG--ARPG- 393
G PG G PGA V P A PG P + G RPG
Sbjct: 862 KGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGE 921
Query: 394 VGVGGIPTYG-----------VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGI 442
VG G P GA G PG G+ G GV G+PG G G G+PG
Sbjct: 922 VGPPGPPGPAGEKGSPGADGPAGAPGTPG-PQGIAGQRGVVGLPGQRGERGFPGLPGPSG 980
Query: 443 SPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV--- 499
P Q + A + PG PG+ PG G APG +PG +PG
Sbjct: 981 EPGKQGPSGASGERGP--PGPMGPPGLAGPPGESGREG---APGAEGSPGRDGSPGAKGD 1035
Query: 500 -GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 558
G GP G A + V + G P VG
Sbjct: 1036 RGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP--------------- 1080
Query: 559 VGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKA 618
VGA P P + + G G G G G PG GP+ A+ A
Sbjct: 1081 VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP 1140
Query: 619 AAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGG 651
G G GL GL G +G PG G G
Sbjct: 1141 RGPPGSAGAPGKDGLNGL-PGPIGPPGPRGRTG 1172
Score = 140 bits (354), Expect = 3e-33
Identities = 184/573 (32%), Positives = 203/573 (35%), Gaps = 57/573 (9%)
Query: 111 GLGGVPGVGGL-------GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGA 163
G G+PG GL G P + G PQ G G+ +PG P G
Sbjct: 130 GRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPG--PMGPSGPR 187
Query: 164 RFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYG 223
PG PG P G P PG GA + GP G P G K P PG G
Sbjct: 188 GLPGPPGAPG-PQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGK-PGRPGERG 245
Query: 224 LPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 283
P GP G G G AG P G + + AK AG AG G
Sbjct: 246 PP----------GPQGARGLPGTAGLP-----GMKGHRGFSGLDGAKGDAGPAGPKGEPG 290
Query: 284 GAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVP 342
G G PG + G G+ G G P A A A GAA P GP G G P
Sbjct: 291 SPGENGAPGQM-GPRGLPGERGRPGAPGPAGARGNDGATGAAG---PPGPTGPAGPPGFP 346
Query: 343 GAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGA--RPGV-GVGGI 399
GA VG G P P V G P A AA A GA +PG G G
Sbjct: 347 GA----VGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGA 402
Query: 400 PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
P GA GFPG G G G G PG G G G PG + A + G+
Sbjct: 403 PGI-AGAPGFPG-ARGPSGPQGPGGPPGPKGNSGEPGAPG----SKGDTGAKGEPGPVGV 456
Query: 460 --VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKS 516
PG G A G G+ PG PG PG GVA GP G A S
Sbjct: 457 QGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVA---GPKGPAGERGS 513
Query: 517 AAKVAAKAQLRAAAGLG-AGIP---GLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGA 572
K A G AG+P GL G PG G PG G PG PGA
Sbjct: 514 PGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGA 573
Query: 573 LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 632
A + G G G G G+PG GPA A A G G G
Sbjct: 574 RGQAGVMGF-PGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 632
Query: 633 LGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGV 665
G G G G+ G G PP A K + GV
Sbjct: 633 EQG-PAGSPGFQGLPGPAG-PPGEAGKPGEQGV 663
Score = 111 bits (277), Expect = 3e-24
Identities = 159/499 (31%), Positives = 178/499 (35%), Gaps = 111/499 (22%)
Query: 236 GPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKF----------GAGAAGV 278
GP G AG G+ G P G+ GP A + G G
Sbjct: 121 GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP 180
Query: 279 LPGVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYG--------AAAGLVP 329
+ G G+PG PGA PG G G G P A+ G AG P
Sbjct: 181 MGPSGPRGLPGPPGA-PGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAG-KP 238
Query: 330 GGPG-FGP----GVVGVPG-AGVPGV-------GVPGA----------GIPVVPGA-GIP 365
G PG GP G G+PG AG+PG+ G+ GA G P PG G P
Sbjct: 239 GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAP 298
Query: 366 G----AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPG 421
G +PG A A GA G G PT G GFPG VG G G
Sbjct: 299 GQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPG-PTGPAGPPGFPG-AVGAKGEAG 356
Query: 422 VAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGV 481
G G G GV G PG P A AA A PG PG A G APG+
Sbjct: 357 PQGPRGSEGPQGVRGEPG----PPGPAGAAGPAGN----PGADGQPG---AKGANGAPGI 405
Query: 482 GLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
APG A G G G PG G G A S AK G PG
Sbjct: 406 AGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAK-----------GEPG-- 452
Query: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG---- 596
VGV G AG G G PG +PG PG GG G+ G
Sbjct: 453 -PVGVQGPPGPAGEEGKRGARGEPGPTGLPGP-------------PGERGGPGSRGFPGA 498
Query: 597 -GVGIPGGVVG----AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGG 651
GV P G G GPA + A + + GL GA GL G G PG G G
Sbjct: 499 DGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL----TGSPGSPGPDGKTG 554
Query: 652 IPPAAAAKAAKYGVAARPG 670
PP A + + G PG
Sbjct: 555 -PPGPAGQDGRPGPPGPPG 572
Score = 109 bits (273), Expect = 7e-24
Identities = 158/456 (34%), Positives = 172/456 (37%), Gaps = 68/456 (14%)
Query: 26 PGGVPGAIPGGVPG--GVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P G PG P G PG G P G G GA G G+P P P G AG G
Sbjct: 768 PIGPPG--PAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ--- 822
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAG-AGLGGVPG-VGGLGVSAAPSVPGAVVPQPGAG 140
PGA G DA A A G AG G PG +G +G A G+ P PGA
Sbjct: 823 -----PGA--KGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGP-PGAT 874
Query: 141 VKPGKVPGVGLPGVYPGGVLPG-------------------ARFPGVGVLPGVPTGAGVK 181
PG VG PG PG A PG PG P AG K
Sbjct: 875 GFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEK 934
Query: 182 PKAPGVGGAFAGIPGV-GPFG-GPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLPYG 234
+PG G AG PG GP G Q GV +G P + P LPG G P G P G
Sbjct: 935 G-SPGADGP-AGAPGTPGPQGIAGQRGV-VGLPGQRGERGFPGLPGPSGEPGKQG--PSG 989
Query: 235 Y----GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGV 290
GP G G G AG P +G + A A GA G G AG PG
Sbjct: 990 ASGERGPPGPMGPPGLAGPPGESG--REGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGA 1047
Query: 291 PGA--IPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGV 346
PGA PG G AG G A A GA P GP G G G G+
Sbjct: 1048 PGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGI 1107
Query: 347 PGV-GVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVG 405
G G G P P G PG P S A + +A GA G+ G+P G
Sbjct: 1108 KGHRGFSGLQGPPGP-PGSPGEQGPSGASGPAGPRGPPGSA--GAPGKDGLNGLP----G 1160
Query: 406 AGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVG 441
G PG G G G G PG G PG G P G
Sbjct: 1161 PIGPPG-PRGRTGDAGPVGPPGPPGPPGPPGPPSAG 1195
Score = 84.0 bits (206), Expect = 4e-16
Identities = 122/376 (32%), Positives = 139/376 (36%), Gaps = 44/376 (11%)
Query: 23 PSRPGGVPGAI-----PG--------GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGG 69
P+ P G PG I PG G PG +PGA G +G GP G P P G
Sbjct: 843 PAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAA-GRVGPP--GPSGNAGPPGPPG 899
Query: 70 LAGAGLGAG-LGAFPAVTFPGALVPGGVADAAA--AYKAAKAGAGLGGVPGVGGL-GVSA 125
AG G G G PG + P G A A AG G PG G+ G
Sbjct: 900 PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG 959
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVY-PGGVLPGARFPGVGVLPGV--PTGAGVKP 182
+PG Q G PG G PG P G PG PG+ P G +
Sbjct: 960 VVGLPG----QRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 1015
Query: 183 KAPGVGGAFA--GIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGG 239
APG G+ G PG G G P P G P AP PG G +G G G
Sbjct: 1016 GAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAP-GAPGAPGPVGPAGKSGDR----GETG 1070
Query: 240 VAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIG 298
AG AG G G GPQ + + G G G G PG PG+ PG
Sbjct: 1071 PAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGS-PGEQ 1129
Query: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG----A 354
G +G PA +A A GL GP PG G G P VG PG
Sbjct: 1130 GPSGASGPAGPRGPPGSAGAPGKDGLNGL--PGPIGPPGPRGRTGDAGP-VGPPGPPGPP 1186
Query: 355 GIPVVPGAGIPGAAVP 370
G P P AG + +P
Sbjct: 1187 GPPGPPSAGFDFSFLP 1202
Score = 73.9 bits (180), Expect = 5e-13
Identities = 91/292 (31%), Positives = 106/292 (36%), Gaps = 29/292 (9%)
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL---------VPGVGV 465
G G PG G+PG G+PG G PG P A YG VPG
Sbjct: 124 GPAGPPGRDGIPGQPGLPGPPGPPGPP-GPPGLGGNFAPQLSYGYDEKSTGGISVPGPMG 182
Query: 466 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKA 524
G PG APG G PG A G +G GP G A K
Sbjct: 183 PSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPG 242
Query: 525 QL-----RAAAGL--GAGIPGLGVGVGVPGLGVG---AGVPGLGVGAGVPGFGAVPGALA 574
+ + A GL AG+PG+ G GL AG G G PG PG +
Sbjct: 243 ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMG 302
Query: 575 ----AAKAAKYGAAVP-GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVG 629
+ + GA P G G GA G G PG AGP A A +A G G
Sbjct: 303 PRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRG 362
Query: 630 AAGLGGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 679
+ G G+ G G PG G G P A + G PG +P FPG
Sbjct: 363 SEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPG 413
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 175 bits (444), Expect = 1e-43
Identities = 222/700 (31%), Positives = 257/700 (36%), Gaps = 107/700 (15%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
P G PG P G PG +PG+ G GP G+P + P G G
Sbjct: 175 PAGPPG--PPGPPGTSGHPGSPGSP---GYQGPPGEPGQAGPSGPPGP------------ 217
Query: 86 TFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVPQPGAGVK 142
PGA+ P G A D + GL G PG+ G G+ P + G G +
Sbjct: 218 --PGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKG----HRGFDGR 271
Query: 143 PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFG 201
G+ G PG+ LPG PG G P G +P PG GA G G
Sbjct: 272 NGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERG-RPGLPGAAGARGNDGARGSDG 330
Query: 202 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAA 260
P P P PG G P + G G G AG+ G G P G GPQ
Sbjct: 331 QPGPPGP----------PGTAGFPGSPG----AKGEVGPAGSPGSNGAPGQRGEPGPQGH 376
Query: 261 AAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAK 320
A A G+ G +G AG+PG PG + G G A A + K
Sbjct: 377 AGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGK 436
Query: 321 YGAAAGLVPGGPGFGPGVVGVPGA----------GVPGV-GVPGA----GIPVVPGA--- 362
GA P G G+ GVPGA G PG G+PGA G P G
Sbjct: 437 NGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGP 496
Query: 363 -GIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPG--FG 413
GIPG P G P AA + + G G G+ G+P G G+ G PG
Sbjct: 497 NGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGS 556
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLV--PGVGVAPGVGV 471
G G PG G G G PGV G PG P+ A K + G PG PG
Sbjct: 557 QGESGRPGPPGPSGPRGQPGVMGFPG----PKGNDGAPGKNGERGGPGGPGPQGPPGKNG 612
Query: 472 APGVGVAPGV--------GLAP----GVGVAPGVGVAPGVGVAPG-IGPGGVAAA--AKS 516
G PG P G+ PG G PG PG GP G A A A
Sbjct: 613 ETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPG 672
Query: 517 AAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVG---AGVPGLGVGAGVPGFGAVPGAL 573
A R GL AG PGL G G PG G AG PG AG PG +PG
Sbjct: 673 GKGDAGAPGERGPPGL-AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPG-- 729
Query: 574 AAAKAAKYGAAVPGVLGGLGALGGV---GIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGA 630
+ G PG G G GG G+PG GP A + G GA
Sbjct: 730 -----ERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGA 784
Query: 631 AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 670
GL G+ G G PG G G PP A G PG
Sbjct: 785 PGLPGI-AGPRGSPGERGETG-PPGPAGFPGAPGQNGEPG 822
Score = 166 bits (421), Expect = 5e-41
Identities = 217/671 (32%), Positives = 257/671 (38%), Gaps = 121/671 (18%)
Query: 26 PGGVPGAI-PGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLGA 81
P G PG PGG G PG GL L G G G GKP +P P G AGA
Sbjct: 616 PQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGA-------- 667
Query: 82 FPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGV----------GGLGVSAAPSVPG 131
PGA PGG DA A + GL G PG+ GG G + P PG
Sbjct: 668 ------PGA--PGGKGDAGAP--GERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPG 717
Query: 132 AVVPQPGAGVKPGKVPGVGLPGVY-----PGGV----LPGARFPGVGVLPGVPTGAGVKP 182
A PG PG+ G+G PG PGG +PG P P P G +P
Sbjct: 718 AA-GTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQP 776
Query: 183 KAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYGYGPGG 239
G GGA G+PG+ GP G P G P A P PG G P G+ G G
Sbjct: 777 GDKGEGGA-PGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERG-APGEKG 834
Query: 240 VAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIG 298
G G AG P G+G GP + + G GAAG G G+PG PG+
Sbjct: 835 EGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGF---PGARGLPGPPGS----- 886
Query: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG-VGVPGA-G 355
G P + + K G A G PG PGV G G AG PG G PGA G
Sbjct: 887 ----NGNPGPPGPSGSPGKDGPPGPAGN--TGAPG-SPGVSGPKGDAGQPGEKGSPGAQG 939
Query: 356 IPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
P PG GI G GAR G G+P G G P
Sbjct: 940 PPGAPGPLGIAGIT--------------------GARGLAGPPGMP----GPRGSP---- 971
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
G G+ G +G PG G+ G G PG P+ A A + PG PG PG
Sbjct: 972 GPQGVKGESGKPGANGLSGERGPPG----PQGLPGLAGTAGE----PGRDGNPGSDGLPG 1023
Query: 475 VGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG 533
+PG G +PG APG PG +GP G + + + A A AG
Sbjct: 1024 RDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAG-KSGDRGESGPAGPAGAPGPAG-S 1081
Query: 534 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGA-AVPGVLGGL 592
G PG G G G G+ G PG PG + A + GA PG G
Sbjct: 1082 RGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPG--SPGPAGQQGAIGSPGPAGPR 1139
Query: 593 GALGGVGIPG--------GVVG----AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG 640
G +G G PG G +G G + + Q G G G G GG
Sbjct: 1140 GPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGG 1199
Query: 641 LGVPGVGGLGG 651
+G + G+GG
Sbjct: 1200 VGAAAIAGIGG 1210
Score = 163 bits (412), Expect = 6e-40
Identities = 230/712 (32%), Positives = 255/712 (35%), Gaps = 131/712 (18%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
PS P G PGAI P AG G PG + L P P G+ G AG+ F
Sbjct: 211 PSGPPGPPGAIGPSGP-------AGKDGESGRPGRPGERGL-PGPPGIKGP---AGIPGF 259
Query: 83 PAVT----FPGALVPGGVADAAAAYKAAKAGAGLGGVPGV----GGLGVSAAPSVPGAVV 134
P + F G G A K G G PG G G P +PGA
Sbjct: 260 PGMKGHRGFDGRNGEKG-ETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAG 318
Query: 135 P-----------QPGAGVKPGKVPGVGLPG----VYPGGVLPGARFPGVGVLPGVPTGAG 179
QPG PG G PG V P G PG PG AG
Sbjct: 319 ARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAG 378
Query: 180 VK--PKAPGVGGA--------FAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTT 228
+ P PG+ G+ AGIPG G G P P G AP L GG G P
Sbjct: 379 AQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAG-ANGAPGLRGGAGEPGKN 437
Query: 229 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 288
G G G G G+AG P G A K + GA G+ G G P
Sbjct: 438 G----AKGEPGPRGERGEAGIP-----GVPGAKGEDGKDGSPGEPGANGLPGAAGERGAP 488
Query: 289 GV-----PGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVG 340
G P IPG G AG G P A AA + + G VPGGPG PG G
Sbjct: 489 GFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDG-----VPGGPGMRGMPGSPG 543
Query: 341 VPGA-GVPGVGVPG----AGIPVVPGAGIPGA--AVPGVVSPEAAAKAAAKAAKYGARPG 393
PG+ G P G PG +G P PG P V G P+ A K + G G
Sbjct: 544 GPGSDGKP--GPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG 601
Query: 394 VGVGGIPTYG-----------VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGI 442
G G P G GG G G G G+ G+PG GG PG G PG
Sbjct: 602 PGPQGPPGKNGETGPQGPPGPTGPGGDKG-DTGPPGPQGLQGLPGTGGPPGENGKPGEP- 659
Query: 443 SPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGV-GVAPGVGVAPGVGV 501
P+ A A PG G APG PG+ APG+ G A G G G
Sbjct: 660 GPKGDAGA----------PGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGA 709
Query: 502 APGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA 561
A GP G A GL G+PG G+G PG G PG G GA
Sbjct: 710 AGPPGPPGAA----------------GTPGL-QGMPGERGGLGSPGPKGDKGEPG-GPGA 751
Query: 562 -GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAA 620
GVPG G PG G G G G PG AGP +
Sbjct: 752 DGVPGKDGPRGPTGP-------IGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETG 804
Query: 621 KAAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 670
G GA G G G G G PG G GG PP A G A PG
Sbjct: 805 PPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGG-PPGVAGPPGGSGPAGPPG 855
Score = 133 bits (335), Expect = 5e-31
Identities = 183/559 (32%), Positives = 204/559 (36%), Gaps = 82/559 (14%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPG-AGLGALGGGA--LGPGGKPLKPVPGGLAGAGL 75
P G PGA G G PG PG AG L GGA GP G P G GA
Sbjct: 661 PKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAG 720
Query: 76 GAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP 135
GL P G PG D K G G GVPG G P P
Sbjct: 721 TPGLQGMPGER-GGLGSPGPKGD-----KGEPGGPGADGVPGKDGPRGPTGPIGPPGPAG 774
Query: 136 QP---GAGVKPGKVPGVGLPGVYPG-----GVLPGARFPGVGVLPGVPTGAGVKPKAPGV 187
QP G G PG +PG+ P PG G A FPG G P G G + APG
Sbjct: 775 QPGDKGEGGAPG-LPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGER-GAPGE 832
Query: 188 GGAFAGIPGV-GPFGGPQPGVPLG-YPIK----APKLPGGYGLPYTTGKLPYGYGPGGVA 241
G G PGV GP GG P P G +K +P PG G P G LP G G
Sbjct: 833 KGE-GGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARG-LPGPPGSNGNP 890
Query: 242 GAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G +G P G G A + + K AG G G G PG PG + GI
Sbjct: 891 GPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPL-GI 949
Query: 298 GGIAGV-------------GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA 344
GI G G+P + K G + P GP PG+ G A
Sbjct: 950 AGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGT--A 1007
Query: 345 GVPG-VGVPGA-GIPVVPGA----------GIPGA-AVPGVVSPEAAAKAAAKAAKYGAR 391
G PG G PG+ G+P G+ G PGA PG P A K+ G
Sbjct: 1008 GEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGES 1067
Query: 392 PGVGVGGIPTYGVGAGGFPG-----FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEA 446
G G P G+ G PG G G G AG+ G G PG G PG P
Sbjct: 1068 GPAGPAGAPG-PAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPG-SPGPAG 1125
Query: 447 QAAAAAKAAKYGLVPGVGVA-----------PGVGVAPGVGVAPGVGLAPGVGVAPGVGV 495
Q A G VG + PG PG G + G PG
Sbjct: 1126 QQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPG 1185
Query: 496 APGVGVAPGIGPGGVAAAA 514
PG APG GGV AAA
Sbjct: 1186 PPGPPGAPGPCCGGVGAAA 1204
Score = 126 bits (317), Expect = 6e-29
Identities = 171/533 (32%), Positives = 199/533 (37%), Gaps = 91/533 (17%)
Query: 175 PTGAGVKPKAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPY 233
P G P PG+ G G PG+ G G P P G P P Y Y + +
Sbjct: 104 PQGPKGDPGPPGIPGR-NGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKS 162
Query: 234 GYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGA 293
G GG+AG G AG P GP G +G G G G PG
Sbjct: 163 GVAVGGLAGYPGPAGPP-----GPPGP------------PGTSGHPGSPGSPGYQGPPGE 205
Query: 294 IPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPG-AGVPGV 349
PG G +G G P A + A K + G PG PG PG G+ G AG+PG
Sbjct: 206 -PGQAGPSGPPGPPGAIGPSGPAGKDGESGR-----PGRPGERGLPGPPGIKGPAGIPGF 259
Query: 350 -GVPG-------------AGIPVVPGA-GIPGA-AVPGVVSPEAA---------AKAAAK 384
G+ G G P + G G+PG PG + P A AA
Sbjct: 260 PGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGA 319
Query: 385 AAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
GAR G G P G GFPG G G G AG PG G PG G PG P
Sbjct: 320 RGNDGARGSDGQPG-PPGPPGTAGFPG-SPGAKGEVGPAGSPGSNGAPGQRGEPG----P 373
Query: 445 EAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG 504
+ A A PG+ +PG G PG APG+ A G G APG
Sbjct: 374 QGHAGAQGPPGP----PGINGSPGGKGEMGPAGIPG---APGLMGARGPPGPAGANGAPG 426
Query: 505 IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVP 564
+ GG K+ AK + R G AGIP GVPG G G G P
Sbjct: 427 L-RGGAGEPGKNGAK--GEPGPRGERG-EAGIP------GVPG---AKGEDGKDGSPGEP 473
Query: 565 GFGAVPGALAAAKAAKY-GAAVP-GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKA 622
G +PGA A + G A P G+ G G G G PG AGP AA
Sbjct: 474 GANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPG---PAGPRGAAGEPGRDGVP 530
Query: 623 AQFGLVGAAGLGGLGVGGLGVPGVGGLGGI-----PPAAAAKAAKYGVAARPG 670
G+ G G G G G G PG G G PP + + GV PG
Sbjct: 531 GGPGMRGMPGSPG-GPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPG 582
Score = 125 bits (314), Expect = 1e-28
Identities = 161/523 (30%), Positives = 190/523 (36%), Gaps = 98/523 (18%)
Query: 203 PQPGVPLG-------YPIKAPKLP-------GGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
P P +P G P AP P G G P G +P G G+ G G G
Sbjct: 75 PNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPG-IPGRNGDPGIPGQPGSPG 133
Query: 249 YPTGTGV------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 302
P G+ GPQ + K G G+ G AG PG PG PG G G
Sbjct: 134 SPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP-PGTSGHPG 192
Query: 303 -VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG-VGVPG----AG 355
G+P +A P GP PG +G G AG G G PG G
Sbjct: 193 SPGSPGYQGPPGEPGQAG---------PSGPPGPPGAIGPSGPAGKDGESGRPGRPGERG 243
Query: 356 IPVVPG----AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG-----VGA 406
+P PG AGIPG PG+ + + GA G G+P +G
Sbjct: 244 LPGPPGIKGPAGIPG--FPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGP 301
Query: 407 GGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVA 466
G PG G G+PG AG G G G G PG P + AK G V G +
Sbjct: 302 RGAPG-ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAK-GEVGPAG-S 358
Query: 467 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPGGVAAAAKSAAKVAA 522
PG APG PG G PG PG+ +PG +GP G+
Sbjct: 359 PGSNGAPGQRGEPGPQGHAGAQGPPG---PPGINGSPGGKGEMGPAGI------------ 403
Query: 523 KAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG 582
G PGL G PG G PGL GAG PG G + +
Sbjct: 404 -----------PGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGE-PGPRGERGE 451
Query: 583 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-----G 637
A +PGV G G G G P G GA AA + A G G AG G+
Sbjct: 452 AGIPGVPGAKGEDGKDGSP-GEPGANGLPGAAGERGAP-----GFRGPAGPNGIPGEKGP 505
Query: 638 VGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGG 680
G G PG G P AA + + GV PG P PGG
Sbjct: 506 AGERGAPGPAG----PRGAAGEPGRDGVPGGPGMRGMPGSPGG 544
Score = 104 bits (259), Expect = 3e-22
Identities = 153/474 (32%), Positives = 167/474 (35%), Gaps = 70/474 (14%)
Query: 23 PSRPGGVPGAI-PGGVPG--GVFYPGAGLGALGG-GALGPGGKPLKP----VPGGLA--G 72
P P G PG GG PG G+ P G G G GP G P P PGG G
Sbjct: 769 PPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERG 828
Query: 73 AGLGAGLGAFPAVTFPGALVPGGVADAAA-------AYKAAKAGAGLGGVPGVGGL---- 121
A G G P V P PGG A + + G G G PG GL
Sbjct: 829 APGEKGEGGPPGVAGP----PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPP 884
Query: 122 GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPG--GVLPGARFPGVGVLPGV--PTG 177
G + P PG PG PG G PG PG G A PG PG P G
Sbjct: 885 GSNGNPGPPGPS-GSPGKDGPPGPAGNTGAPGS-PGVSGPKGDAGQPGEKGSPGAQGPPG 942
Query: 178 AGVKPKAPGVGGA--FAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG 234
A G+ GA AG PG+ GP G P P G K PG GL G
Sbjct: 943 APGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGK----PGANGLSGERGPP--- 995
Query: 235 YGPGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGA 293
GP G+ G AG AG P G G K G G G G PG PG
Sbjct: 996 -GPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGP 1054
Query: 294 IPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGV-GV 351
+ G G A A A A GA P GP G G GA G+ G G
Sbjct: 1055 VGPAGKSGDRGESGPAGPAGAPGPAGSRGAPG---PQGPRGDKGETGERGAAGIKGHRGF 1111
Query: 352 PG-AGIPVVPG-AGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP-------- 400
PG G P PG AG GA PG P + K G G G P
Sbjct: 1112 PGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGE 1171
Query: 401 TYGVGAGGFPGF----------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G+ G PG G GG+ G A + G+GG G P G P
Sbjct: 1172 RGSEGSPGHPGQPGPPGPPGAPGPCCGGV-GAAAIAGIGGEKAGGFAPYYGDEP 1224
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 173 bits (438), Expect = 5e-43
Identities = 220/742 (29%), Positives = 279/742 (37%), Gaps = 134/742 (18%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPG--GVPGAI----PGGVPGGVFYPGA---------- 46
G+T A PG HP PG G PG++ G PGGV +PG+
Sbjct: 553 GMTGRAGSPG------RDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPP 606
Query: 47 GLGALGG----------------GALGPGGKPLK--PVPGGLAGAGLGAGLGAFPAVT-- 86
G G G G GP G+P K P+PG GL G FP
Sbjct: 607 GYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPG-FPGPQGD 665
Query: 87 --FPGALVPGGVADAAAAYKAAKAGAGLGGVPGV-------GGLGVSAAPSVPG--AVVP 135
FPG PG + G G G PG G +G P PG +
Sbjct: 666 RGFPGT--PGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPG 723
Query: 136 QPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFA--G 193
PG + G+ PGVGLPG+ LPG PG+ PG GV P PG GA G
Sbjct: 724 NPGVQGQKGE-PGVGLPGLKG---LPG--LPGIPGTPGEKGSIGV-PGVPGEHGAIGPPG 776
Query: 194 IPGV----GPFGGP----QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 245
+ G+ GP G P PGVP P A PGG G P +G P G+ G G
Sbjct: 777 LQGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSG-------PPGIKGEKG 829
Query: 246 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGGIAGVG 304
G+P GP+ A +G G LPG GA G+PG PG+ +G + G
Sbjct: 830 FPGFPGLDMPGPKGDKGAQGLPGITGQSGLPG-LPGQQGAPGIPGFPGSKGEMGVMGTPG 888
Query: 305 TPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGI 364
P + A + G GP PG+ G G VG+PG
Sbjct: 889 QPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKG----DVGLPGK---------- 934
Query: 365 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAG 424
PG + + G + +G P G+ G P G G+PG G
Sbjct: 935 -----PGSMDKVDMGSMKGQKGDQGEKGQIG----PIGEKGSRGDP----GTPGVPGKDG 981
Query: 425 VPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL-VPGVGVAPGVGVAPGVGVAPGVGL 483
G G PG G PG+ +P A K + G+ +PG GV PG +PG+
Sbjct: 982 QAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPG 1041
Query: 484 APGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPG 538
G G PG+G+ PG+ G G+A S + K + G+ G+ G
Sbjct: 1042 DKGAKGEKGQAGPPGIGI-PGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKG 1100
Query: 539 LGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGV 598
VG PG G+PG G+PG +PG K A +PG G G G
Sbjct: 1101 SPGSVGYPG---SPGLPGEKGDKGLPGLDGIPG-------VKGEAGLPGTPGPTGPAGQK 1150
Query: 599 GIPGGVVGAGPAAAAAAAKAAAKAAQF-GLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAA 657
G PG P +A + F G GA G G G +G PG+ G GIP
Sbjct: 1151 GEPGS--DGIPGSAGEKGEPGLPGRGFPGFPGAKGDKG-SKGEVGFPGLAGSPGIP---- 1203
Query: 658 AKAAKYGVAARPGFGLSPIFPG 679
+ G PG P PG
Sbjct: 1204 GSKGEQGFMGPPGPQGQPGLPG 1225
Score = 172 bits (436), Expect = 9e-43
Identities = 223/744 (29%), Positives = 281/744 (37%), Gaps = 117/744 (15%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPG--GVPGA--IPG--------GVPGGVFYPGAGLGA 50
GL PG ++ L P PG G+PG+ PG G PG PG GA
Sbjct: 630 GLPGPKGEPGKIVPL-----PGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEK-GA 683
Query: 51 LGGGALG----PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAA 106
+G +G PG K + +PG + G G PG V G +
Sbjct: 684 VGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNPG--VQGQKGEPGVGLPGL 741
Query: 107 KAGAGLGGVPGV----GGLGVSAAPSVPGAVVP--------QPGAGVKPGKVPGVGLPGV 154
K GL G+PG G +GV P GA+ P +PG PG V G+PG+
Sbjct: 742 KGLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGIRGEPGPPGLPGSVGSPGVPGI 801
Query: 155 YPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG--AFAGIPGV---GPFG--GPQPGV 207
P PGAR P G P +G PG+ G F G PG+ GP G G Q
Sbjct: 802 GP----PGARGPPGGQGPPGLSGP------PGIKGEKGFPGFPGLDMPGPKGDKGAQGLP 851
Query: 208 PLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKA 267
+ P LPG G P G P G GV G G+ G P GP A +
Sbjct: 852 GITGQSGLPGLPGQQGAPGIPG-FPGSKGEMGVMGTPGQPGSP-----GPVGAPGLPGEK 905
Query: 268 AAKFGAGAAGVL--PGV----GGAGVPGVPGAIPGI---------------GGIAGVGTP 306
G++G PG+ G G+PG PG++ + G I +G
Sbjct: 906 GDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEK 965
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGV--GVPGAGIPVVPGA- 362
+ K G A GP PG+ G PGA G+PG V G G+P PG
Sbjct: 966 GSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEK 1025
Query: 363 GIPGAAVPGVV-SPEAAAKAAAKAAKYGARP-GVGVGGI--PTYGVGAGGFPGFGVGVGG 418
G+PG +PG SP AK K A P G+G+ G+ G GFPG G G
Sbjct: 1026 GVPG--IPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAGFPG-SPGEKG 1082
Query: 419 IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVA 478
G G+PG+ G PG+ G PG P + K K GL PG+ PGV G+
Sbjct: 1083 EKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDK-GL-PGLDGIPGVKGEAGLPGT 1140
Query: 479 PGVGLAPGVGVAPGVGVAPGVGVA---PGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAG 535
PG G PG PG PG+ G + +K ++ G
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEV--------G 1192
Query: 536 IPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGAL 595
PGL G+PG G G G G +PG+ G A G G G
Sbjct: 1193 FPGLAGSPGIPG---SKGEQGFMGPPGPQGQPGLPGS--------PGHATEGPKGDRGPQ 1241
Query: 596 GGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPA 655
G G+PG GP G GA G+ G G G G+ G+GG P
Sbjct: 1242 GQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPG-PKGDPGFQGMPGIGGSPGI 1300
Query: 656 AAAKAAKYGVAARPGFGLSPIFPG 679
+K G PGF PG
Sbjct: 1301 TGSK-GDMGPPGVPGFQGPKGLPG 1323
Score = 169 bits (427), Expect = 1e-41
Identities = 230/734 (31%), Positives = 285/734 (38%), Gaps = 123/734 (16%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLG 80
P RPG G+PG GV G PG GL PG K L +PG G +G
Sbjct: 713 PGRPGFNGLPGN--PGVQGQKGEPGVGL---------PGLKGLPGLPGIPGTPGEKGSIG 761
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAG 140
GA+ P G+ G G PGV G+G A PG P PG
Sbjct: 762 VPGVPGEHGAIGPPGL-QGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGP-PGLS 819
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPG--- 196
PG G PG +PG +PG + G LPG+ TG P PG GA GIPG
Sbjct: 820 GPPGIKGEKGFPG-FPGLDMPGPKGDKGAQGLPGI-TGQSGLPGLPGQQGA-PGIPGFPG 876
Query: 197 ----VGPFGGP-QPGVPLGYPIKAPKLPG---GYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
+G G P QPG P P+ AP LPG +G P ++G G G+ G G G
Sbjct: 877 SKGEMGVMGTPGQPGSP--GPVGAPGLPGEKGDHGFPGSSGPR----GDPGLKGDKGDVG 930
Query: 249 YPTGTGVGPQAAAAAAAKAAAKFGA-GAAGVLPGVGGAGVPGVPGAIPGIGGIAGV---- 303
P G + + G G G + G G PG PG +PG G AG
Sbjct: 931 LPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPG-VPGKDGQAGQPGQP 989
Query: 304 ---GTPAAAAAAAAAAKAAKYGAAAGL-VPGGPGFGPGVVGVPGA-GVPGV-GVPGA--- 354
G P + A G+ G+ +PG PG GV G+PG G PG+ G GA
Sbjct: 990 GPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG-EKGVPGIPGPQGSPGLPGDKGAKGE 1048
Query: 355 -GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG 413
G PG GIPG + G + A + G + +G+ G+P G G PG
Sbjct: 1049 KGQAGPPGIGIPG--LRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPG-SPGLKGSPG-S 1104
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGV----GI----SPEAQAAAAAKAAKYGLVPGVGV 465
VG G PG+ G G G+PG+ G+PGV G+ P A + G +PG
Sbjct: 1105 VGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDG-IPGSAG 1163
Query: 466 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-------------GPGGVAA 512
G PG G PG A G + G PG+ +PGI GP G
Sbjct: 1164 EKGEPGLPGRGF-PGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPG 1222
Query: 513 AAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL----GVGA--------GVPGLGVG 560
S + G+PGL +G PGL GV G PG+
Sbjct: 1223 LPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGP 1282
Query: 561 AGVPGFGAVPG-----ALAAAKAAKYGAAVPGVLG--GLGALGGV-------GIPGGVVG 606
G PGF +PG + +K VPG G GL L G+ G+PG
Sbjct: 1283 KGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGL 1342
Query: 607 AGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL----GVPGVGGLGGIPPAAAAKAA 661
GP + GL G G GL G+ GL G GV GL GIP
Sbjct: 1343 PGPPGPPGPYDII--KGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVGIP-------- 1392
Query: 662 KYGVAARPGFGLSP 675
G PGF +P
Sbjct: 1393 --GPPGIPGFDGAP 1404
Score = 149 bits (376), Expect = 8e-36
Identities = 218/707 (30%), Positives = 266/707 (37%), Gaps = 184/707 (26%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTF 87
G PG P G+PG V PG G G G G P P GL+G G FP F
Sbjct: 782 GEPG--PPGLPGSVGSPGVP----GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPG--F 833
Query: 88 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPG--------AVVPQPG 138
PG +PG D K A+ G+ G G+ GL G AP +PG V+ PG
Sbjct: 834 PGLDMPGPKGD-----KGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPG 888
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGARFP----------GVGVLPGVP------------- 175
PG V GLPG PG+ P G LPG P
Sbjct: 889 QPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKG 948
Query: 176 ----------------TGAGVKPKAPGVGG--AFAGIPGV-GPFGGP----QPGVPLGYP 212
G+ P PGV G AG PG GP G P PG P G P
Sbjct: 949 QKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAP-GLP 1007
Query: 213 IKAPK-LPGGYGLPYTTGKL-------PYGY----GPGGVAGAAGKAGYPTGTGV----- 255
PK GG GLP T G+ P G G G G G+AG P G G+
Sbjct: 1008 --GPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAG-PPGIGIPGLRG 1064
Query: 256 --GPQAAAAAAAKAAAKFGAGAAGV--LPG----------VGGAGVPGVPG-----AIPG 296
G Q A K G+ G+ +PG VG G PG+PG +PG
Sbjct: 1065 EKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPG 1124
Query: 297 IGGIAGV----GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPG---- 348
+ GI GV G P A + + G+ +PG G G G+PG G PG
Sbjct: 1125 LDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDG--IPGSAG-EKGEPGLPGRGFPGFPGA 1181
Query: 349 ---------VGVPG-AGIPVVPGA-------GIPGA-AVPGVVSPEAAAKAAAKAAKYGA 390
VG PG AG P +PG+ G PG PG+ A K + G
Sbjct: 1182 KGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDR-GP 1240
Query: 391 RPGVGVGGIPTYGVGAGGFPGF-GV----------GVGGIPGVAGVPGVGGVPGVGGVPG 439
+ G+ G+P +G G PG GV G G+PG G PG G+PG+GG PG
Sbjct: 1241 QGQPGLPGLPG-PMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPG 1299
Query: 440 VGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV 499
+ +K + P PGV PG G+ G+ G PG
Sbjct: 1300 I------------TGSKGDMGP-----PGV---PGFQGPKGLPGLQGIKGDQGDQGVPGA 1339
Query: 500 GVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 558
PG GP G K + GL G+PG GV GL G+PG
Sbjct: 1340 KGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGL-QGLPGPKGQQGVTGL---VGIPG-- 1393
Query: 559 VGAGVPGFGAVPGALAAAKAAKYGAAVP-GVLGGLGALGGVGIPGGV 604
G+PGF PG + + G A P G G G G G+PG +
Sbjct: 1394 -PPGIPGFDGAPG-----QKGEMGPAGPTGPRGFPGPPGPDGLPGSM 1434
Score = 139 bits (349), Expect = 1e-32
Identities = 215/712 (30%), Positives = 257/712 (36%), Gaps = 108/712 (15%)
Query: 22 HPSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPL---KPVPGGLAGAGLG 76
+P PG +PG IPG G PG PG G LGP G P P P GL G
Sbjct: 101 YPGNPG-LPG-IPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGD 158
Query: 77 AG--LGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV 134
G LG P + G + G+ G PG GL P P
Sbjct: 159 PGEILGHVPGMLLKGE----------------RGFPGIPGTPGPPGLPGLQGPVGPPGFT 202
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP-------GV 187
PG PG G G+ G GV PGVP A V+ K G
Sbjct: 203 GPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQ 262
Query: 188 GG--AFAGIPGVGPFGGPQPGVPLGYPIK--------APKLPGGYGLPYTTGKLPYGYGP 237
G F G+PGVG G P P G P K +P PG G P G+ GP
Sbjct: 263 KGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGR----QGP 318
Query: 238 GGVAGAAGKAGYP-TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPG 296
G G AG G P G GP + + G G G G PG+PG PG
Sbjct: 319 QGEKGEAGPPGPPGIVIGTGP------LGEKGERGYPGTPGPRGEPGPKGFPGLPGQ-PG 371
Query: 297 IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGA-GVPGV---- 349
G+ G A + G +PG G PG G PG G PG
Sbjct: 372 PPGLPVPGQAGAPGFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPGPPGQPGYTNGI 431
Query: 350 -----GVPG-AGIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPG-------VG 395
G PG G P +PG PG G + + Y PG +G
Sbjct: 432 VECQPGPPGDQGPPGIPGQ--PGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIG 489
Query: 396 VGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPG---VGISPEAQAAAAA 452
G P G G PG GV G+PG G PG+ G PG G PG + +
Sbjct: 490 FPGQPG-AKGDRGLPGRD-GVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPG 547
Query: 453 KAAKYGLV-----PGVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIG 506
+ G+ PG PG+ PG +PG VGL G GVG G G
Sbjct: 548 FPGQPGMTGRAGSPGRDGHPGL---PGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPG 604
Query: 507 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 566
P G A + K Q A G G PGL G PG V +PG G+PG
Sbjct: 605 PPGYG----PAGPIGDKGQ--AGFPGGPGSPGLPGPKGEPGKIV--PLPGPPGAEGLPGS 656
Query: 567 GAVPGALAAAKAAKYGAAVPGVLGGLGALG--GVGIPG--GVVGA-GPAAAAAAAKAAAK 621
PG + PG+ G GA+G G+G PG G G G +
Sbjct: 657 PGFPGP-QGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGR 715
Query: 622 AAQFGLVGAAGL-GGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 670
GL G G+ G G G+G+PG+ GL G+P P + GV PG
Sbjct: 716 PGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPG 767
Score = 125 bits (313), Expect = 2e-28
Identities = 197/665 (29%), Positives = 229/665 (34%), Gaps = 137/665 (20%)
Query: 104 KAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGA 163
K K GL G+ GV G P + G PQ G K G GLPG PGA
Sbjct: 45 KGQKGERGLPGLQGVIGF-----PGMQGPEGPQGPPGQK-GDTGEPGLPGTKGTRGPPGA 98
Query: 164 R-FPGVGVLPGVPTGAGVKPKAPGVGG-----------------AFAGIPG--------- 196
+PG LPG+P G P PG+ G FAG PG
Sbjct: 99 SGYPGNPGLPGIP-GQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKG 157
Query: 197 -VGPFGGPQPGVPL----GYPIKAPKLPGGYGLPYTTGKL-PYGY----GPGGVAGAAGK 246
G G PG+ L G+P P PG GLP G + P G+ GP G G G+
Sbjct: 158 DPGEILGHVPGMLLKGERGFP-GIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGE 216
Query: 247 AGY-------PTG----------TGVGPQAAAAAAAKAAAKFGAGAAGV-----LPGVGG 284
G P G GV QA A K G G +PGVG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGE 276
Query: 285 AGVPGVPG--AIPGIGGIAG-------VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG 335
G PG PG PG G G G P + G A P G G
Sbjct: 277 KGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIG 336
Query: 336 PGVVGVPG-AGVPGV----GVPG-AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKY 388
G +G G G PG G PG G P +PG G PG VPG +
Sbjct: 337 TGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDR 396
Query: 389 GARPGVGVGGI--------PTYGVGAGGFPGFGVGV----GGIPGVAGVPGVGGVPGVGG 436
G PG + G P G G PG+ G+ G PG G PG+ G PG G
Sbjct: 397 GF-PGTSLPGPSGRDGLPGPPGSPGPPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGFIG 455
Query: 437 VPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA 496
G + ++ Y PG PG PG A G PG GV
Sbjct: 456 EIGEK-GQKGESCLICDIDGYRGPPGPQGPPGEIGFPGQPGAKGDRGLPG---RDGVAGV 511
Query: 497 PGVGVAPGI--GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGV 554
PG PG+ PG + + K G PG G PG+ AG
Sbjct: 512 PGPQGTPGLIGQPGAKGEPGEFYFDLRLKGD--------KGDPGF---PGQPGMTGRAGS 560
Query: 555 PGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA 614
PG G+PG PG++ G+ G G GGVG PG GP
Sbjct: 561 PGRDGHPGLPGPKGSPGSV-------------GLKGERGPPGGVGFPGSRGDTGPPGPPG 607
Query: 615 AAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLS 674
A G +G G G GG G PG+ G G P G PG S
Sbjct: 608 YGPA-------GPIGDKGQAGF-PGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPG---S 656
Query: 675 PIFPG 679
P FPG
Sbjct: 657 PGFPG 661
Score = 115 bits (289), Expect = 1e-25
Identities = 151/487 (31%), Positives = 185/487 (37%), Gaps = 104/487 (21%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALG--PGGKPLKPVPGGLAGAGLGAG 78
P +PG P PG G PG PG G++GG L PG K + +PG GL
Sbjct: 986 PGQPG--PKGDPGISGTPGAPGLPGPK-GSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGD 1042
Query: 79 LGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVV 134
GA G P G+ + K G+ G PG G G P +PG+
Sbjct: 1043 KGAKGE---KGQAGPPGIG--IPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS-- 1095
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGA 190
PG PG V G PG LPG + PG+ +PGV AG+ P PG G
Sbjct: 1096 --PGLKGSPGSVGYPGSPG------LPGEKGDKGLPGLDGIPGVKGEAGL-PGTPGPTGP 1146
Query: 191 FA--------GIPGVGPFGGPQPGVP-LGYP--------------IKAPKLPGGYGLPYT 227
GIPG G +PG+P G+P + P L G G+P +
Sbjct: 1147 AGQKGEPGSDGIPGSAGEKG-EPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGS 1205
Query: 228 TGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGV--LPGVGGA 285
G+ + GP G G G G P GP+ + G G LPG+ G
Sbjct: 1206 KGEQGF-MGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGV 1264
Query: 286 ----GVPGVPGAIPGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPG 337
G PG PGA PG+ G G G P + G PG PGF G
Sbjct: 1265 KGDKGNPGWPGA-PGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGP-----PGVPGF-QG 1317
Query: 338 VVGVPGA-GVPG----VGVPGA-GIPVVPGA--------GIPGAAVPGVVSPEAAAKAAA 383
G+PG G+ G GVPGA G+P PG G PG +PG P
Sbjct: 1318 PKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPG--LPGPEGPPGLKGLQG 1375
Query: 384 KAAKYGARPGVGVGGIPTYGVGAGGFPGFG-----------VGVGGIPGVAGVPGVGGVP 432
G + G+ GIP G G PGF G G G G PG G+P
Sbjct: 1376 LPGPKGQQGVTGLVGIP----GPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLP 1431
Query: 433 GVGGVPG 439
G G PG
Sbjct: 1432 GSMGPPG 1438
Score = 71.2 bits (173), Expect = 3e-12
Identities = 112/386 (29%), Positives = 137/386 (35%), Gaps = 99/386 (25%)
Query: 306 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGP----GVVGVPGA-GVPGVGVPGAGIPVVP 360
PAA ++AA G AG G G GV G G G+PG+
Sbjct: 13 PAALLLHEEHSRAAAKGGCAG-----SGCGKCDCHGVKGQKGERGLPGL----------- 56
Query: 361 GAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV----GVGGIPTYGVGAGGFPGFGVGV 416
G+ G PG+ PE + G PG+ G G P GA G+PG
Sbjct: 57 -QGVIG--FPGMQGPEGPQGPPGQKGDTG-EPGLPGTKGTRGPP----GASGYPGN---- 104
Query: 417 GGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVG 476
PG+ G+PG G PG G+PG K + L P PG+ PG
Sbjct: 105 ---PGLPGIPGQDGPPGPPGIPGCN---------GTKGERGPLGP-----PGL---PGFA 144
Query: 477 VAPGVGLAPGVGVAPG--VGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA 534
PG PG+ PG +G PG+ L+ G
Sbjct: 145 GNPGPPGLPGMKGDPGEILGHVPGM-------------------------LLKGERGF-P 178
Query: 535 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGA 594
GIPG G+PGL G PG G PG PG + + G + G G G
Sbjct: 179 GIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPG-----EKGQMGLSFQGPKGDKGD 233
Query: 595 LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGIP 653
G G PG G A A K + G G G G+ GVG G PG G G P
Sbjct: 234 QGVSGPPG---VPGQAQVQEKGDFATKGEK-GQKGEPGFQGMPGVGEKGEPGKPGPRGKP 289
Query: 654 PAAAAKAAKYGVAARPGFGLSPIFPG 679
K G PGF P +PG
Sbjct: 290 ----GKDGDKGEKGSPGFPGEPGYPG 311
Score = 33.1 bits (74), Expect = 0.89
Identities = 41/135 (30%), Positives = 49/135 (36%), Gaps = 29/135 (21%)
Query: 28 GVPGAIPGGVPGGVFYPGA-----GLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
GVPGA G+PG PG G L G PG K L+ +PG G+ +G
Sbjct: 1335 GVPGA--KGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVG-- 1390
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVK 142
PG P G+ G G PG G A P+ P PG
Sbjct: 1391 ----IPG---PPGIP-------------GFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGL 1430
Query: 143 PGKVPGVGLPGVYPG 157
PG + G P V G
Sbjct: 1431 PGSMGPPGTPSVDHG 1445
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 167 bits (424), Expect = 2e-41
Identities = 216/712 (30%), Positives = 265/712 (37%), Gaps = 157/712 (22%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G PG P G+ G PG G G G G GKP K G G
Sbjct: 267 GPPG--PPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG-------------- 310
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVVPQPGAGVK 142
+PG D G G PG G G + P PG V+P+PG G+
Sbjct: 311 -----IPGLPGDP-----------GYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGIT 354
Query: 143 PGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
G+ +GLPG LPG + FPG+ PG+P G P F G G
Sbjct: 355 IGEKGNIGLPG------LPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQK 408
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG-----------YGPGGVAGAAGKA 247
GP PG+ + P PG GLP G P G GP G G+ G
Sbjct: 409 GDEGP-PGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIPPSDEICEPGPPGPPGSPGDK 465
Query: 248 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G GV K F G+ G G+PG+PG +G G
Sbjct: 466 GLQGEQGV-------KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKG 518
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-----AGVPG----VGVPGA-GIP 357
A A GA PG PGF PG G PG G+ G +G PGA G+P
Sbjct: 519 QAGATGPKGLPGIPGA-----PGAPGF-PGSKGEPGDILTFPGMKGDKGELGSPGAPGLP 572
Query: 358 VVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--- 413
+PG PG +PG+ P+ + G G+ G+P +G G PGFG
Sbjct: 573 GLPGT--PGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFGPPG 629
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 472
VG GI GVAG PG G+PG G PG I+ + + G V G+ PG+
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDV-GLPGDPGLPGQ 688
Query: 473 PGVGVAPGVGLAPGVGVAPGVGV--APGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAA 529
PG+ PG PG+ PG+G+ PG PGI GP G
Sbjct: 689 PGLPGIPGSKGEPGI---PGIGLPGPPGPKGFPGIPGPPGAPGT---------------- 729
Query: 530 AGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVL 589
G GL G PG G PG + G PG +PG A K PG
Sbjct: 730 ----PGRIGLEGPPGPPGFPGPKGEPGFAL-PGPPGPPGLPG-FKGALGPKGDRGFPGPP 783
Query: 590 GGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGV----GGLGVPG 645
G G G G+PG GP Q G +G GL G+GV G G+PG
Sbjct: 784 GPPGRTGLDGLPGPKGDVGP------------NGQPGPMGPPGLPGIGVQGPPGPPGIPG 831
Query: 646 -VG--GLGGIP-------------PAAAAKAAKYGVAARPGFGLSPIFPGGA 681
+G GL GIP P + G+ PG PI P G+
Sbjct: 832 PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPG----PIGPPGS 879
Score = 160 bits (405), Expect = 4e-39
Identities = 225/742 (30%), Positives = 273/742 (36%), Gaps = 143/742 (19%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLG 80
P P G PG P G PG G L G GALGP G P P G G GL
Sbjct: 738 PPGPPGFPG--PKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGR---TGLD 792
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP--QPG 138
P G + P G G G PG+ G+GV P PG P QPG
Sbjct: 793 GLPGPK--GDVGPNGQP-------------GPMGPPGLPGIGVQGPPGPPGIPGPIGQPG 837
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG- 196
PG+ G PG+ G PG R PG+ PG P G P PG GA +G PG
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGP-PGERGSPGIPGAPG-PIGPPGSPGLPGKAGA-SGFPGT 894
Query: 197 ---VGPFGGPQPGVPLGYPIKA--------PKLPGGYGLPYTTGK--------LPYGYGP 237
+G G P P PLG P ++ L G GLP TG+ LP GP
Sbjct: 895 KGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGP 954
Query: 238 G-----GVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGV----GGAGV 287
G G G+ G P GV GP+ +G G LPG G G+
Sbjct: 955 MDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPG-LPGPPGPKGNPGL 1013
Query: 288 PGVPGAI--PGIGGIAG-------------------VGTPAAAAAAAAAAKAAKYGAAAG 326
PG PG I PG+ G G G P + G ++
Sbjct: 1014 PGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI 1073
Query: 327 LVPG--GPGFGPGVVGVPG-AGVPG-VGVPGA-GIPVVPGA----GIPG-AAVPGVVSPE 376
+PG GP PG+ G PG G+ G VG PG G+P PGA G+PG PG P+
Sbjct: 1074 GLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPK 1133
Query: 377 AAAKAAAKAAKYGARPGVGVGGIPTY-------------GV-------GAGGFPGFG-VG 415
+ G VG GG P G+ G G PGFG G
Sbjct: 1134 GISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG 1193
Query: 416 VGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 475
G+PG++G G GG+PG+ G PG+ P+ + + PGV PG +PG
Sbjct: 1194 PPGLPGLSGQKGDGGLPGIPGNPGLP-GPKGEPG-------FHGFPGVQGPPGPPGSPGP 1245
Query: 476 GVA-----PGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAA 529
+ PG PG G PG PG+ G GG+ + +
Sbjct: 1246 ALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLK 1305
Query: 530 AGLGA----------------GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 573
G G PGL G PG+ +GVPG G PG PG
Sbjct: 1306 GDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPP 1365
Query: 574 AAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 633
+ + G G G G G+ G GP + GL G G
Sbjct: 1366 GLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGA 1425
Query: 634 GG-LGVGGL-GVPGVGGLGGIP 653
GG G GL G PG GL G P
Sbjct: 1426 GGRKGDPGLPGQPGTRGLDGPP 1447
Score = 156 bits (395), Expect = 5e-38
Identities = 221/714 (30%), Positives = 264/714 (36%), Gaps = 158/714 (22%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGA-GLGALGGGALGPGGK 61
G + PG +L + G PGA G+PG PG GL L G PGG
Sbjct: 539 GFPGSKGEPGDILTFPGMKGDKGELGSPGA--PGLPGLPGTPGQDGLPGLPGPKGEPGGI 596
Query: 62 PLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL 121
K G GL G + PG PG V + K + AG G PG+ G
Sbjct: 597 TFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGE-----KGIQGVAGNPGQPGIPG- 650
Query: 122 GVSAAPSVPGAVVPQPGAGVKPGKVPG----VGLPGVYPGGVLPGARFPGVGVLPGVPTG 177
PG + QPG PG PG VGLPG PG LPG PG LPG+P
Sbjct: 651 ----PKGDPGQTITQPGKPGLPGN-PGRDGDVGLPGD-PG--LPGQ--PG---LPGIPGS 697
Query: 178 AGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
G GIPG+G P P P G+P +PG G P T G++ GP
Sbjct: 698 KGEP-----------GIPGIGL---PGPPGPKGFP----GIPGPPGAPGTPGRIGLE-GP 738
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G G G P GP G G L G G PG PG PG
Sbjct: 739 PGPPGFPGPKGEPGFALPGPPGPPGLP---------GFKGALGPKGDRGFPGPPGP-PGR 788
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGL----VPGGPGFGPGVVGVPGA-GVPGV--- 349
G+ G+ P G+ PG PG PG +G PG G+PG
Sbjct: 789 TGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGI-PGPIGQPGLHGIPGEKGD 847
Query: 350 -GVPGAGIPVVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
G PG +P PG GIPGA PG + P + KA
Sbjct: 848 PGPPGLDVPGPPGERGSPGIPGA--PGPIGPPGSPGLPGKA------------------- 886
Query: 405 GAGGFPGFG-----VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
GA GFPG +G G PG G+PG GVPG+ G G+ P K +K
Sbjct: 887 GASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGE- 945
Query: 460 VPGVGVAPG------VGVA-----PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GP 507
PG+ PG +G PG+ PGV G PG PG+ PG+ GP
Sbjct: 946 -PGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGP 1004
Query: 508 GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFG 567
G L GL G PGL +G G GV G +GVPG
Sbjct: 1005 PGPKG----------NPGLPGQPGL-IGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Query: 568 AVPGALAAAKAAKYGAAVPGVLGGLG--ALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 625
PG +PG G G + +G+PG GP
Sbjct: 1054 GSPG-------------LPGQKGDKGDPGISSIGLPGL---PGPKGEP------------ 1085
Query: 626 GLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
GL G G G+ G +G PG+ GL G P A G PGF +P PG
Sbjct: 1086 GLPGYPGNPGIK-GSVGDPGLPGLPGTPGAK-------GQPGLPGFPGTPGPPG 1131
Score = 142 bits (357), Expect = 1e-33
Identities = 207/722 (28%), Positives = 262/722 (36%), Gaps = 125/722 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPG--GLAGAGLGA 77
P P G+ G P G+PG +PG GL + G GA GP G +PG G G
Sbjct: 85 PPGPKGIRG--PPGLPG---FPGTPGLPGMPGHDGAPGPQG-----IPGCNGTKGERGFP 134
Query: 78 GLGAFPAVTFPGAL--VPGGVADAAAAYKAAKAGA----------GLGGVPGVGGLGVSA 125
G FP + P +PG + + ++ G G+ G+PG G+
Sbjct: 135 GSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPI 194
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 185
P P ++ PG PG +GL P G G P P G + K P
Sbjct: 195 GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG----PPGPPGQISEQKRP 250
Query: 186 GVGGAF----AGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPG 238
+ F G+PG GP G P P G P G G P GK G
Sbjct: 251 -IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQP 309
Query: 239 GVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGAGVPGVPG- 292
G+ G G GYP G G + G+ G G G+PG+PG
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 293 ----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVP 347
PGI G G+ P AA PG PGF PG G G G P
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGP--------------PGPPGF-PGERGQKGDEGPP 414
Query: 348 GVGVPGA----GIPVVPG-AGIPGAAVPGVVSPEAAAKAA-----AKAAKYGARPGVGVG 397
G+ +PG G P PG G PG A P + + + G + GV
Sbjct: 415 GISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVK 474
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G G F G G+ G PG G+PG+ G PG G PG + + A
Sbjct: 475 G----DKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG----QKGEKGQAGATGPK 526
Query: 458 GLVPGVGVAPGVGVAPGVGVAPGVGL-------------APGVGVAPGVGVAPGVGVAPG 504
GL PG+ APG PG PG L +PG PG+ PG PG
Sbjct: 527 GL-PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPG 585
Query: 505 I-GPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGV--GAGVPGLGVG 560
+ GP G + K + G G+PG +G PG G G G+
Sbjct: 586 LPGPKG------EPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGV 639
Query: 561 AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAA 620
AG PG +PG PG+ G G G VG+PG G
Sbjct: 640 AGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLP------- 692
Query: 621 KAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIF 677
G+ G+ G G+ G+G G PG G GI PP A + G+ PG P F
Sbjct: 693 -----GIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPG---PPGF 744
Query: 678 PG 679
PG
Sbjct: 745 PG 746
Score = 139 bits (349), Expect = 1e-32
Identities = 199/652 (30%), Positives = 240/652 (36%), Gaps = 137/652 (21%)
Query: 23 PSRPG-----GVPGAI-PGGVPGGVFYPG-AGLGALGG-----GALGPGGKP-------L 63
P PG G+PGA P G PG PG AG G G +GP G P
Sbjct: 856 PGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGR 915
Query: 64 KPVPG-----GLAGA-GLGAGLGAFPAVTFPGALVPGGVADA-AAAYKAAKAGAGLGGVP 116
VPG GL G GL G + PG P G D K K GL G+P
Sbjct: 916 SGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIP 975
Query: 117 GVGG-LGVSAAPSVPG--AVVPQPGAGVKPGKVPGVGLPGVYPG--------GVLPGARF 165
GV G G P PG + QPG PG GLPG PG G + F
Sbjct: 976 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPG-QPGLIGPPGLKGTIGDMGF 1034
Query: 166 PGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPGVGPFGGP-------QPGVPLGYP-- 212
PG + G P +GV +P +PG+ G G PG+ G P +PG+P GYP
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP-GYPGN 1093
Query: 213 ------IKAPKLPGGYGLPYTTGK--------LPYGYGPGGVAGAAGKAGYPTGTGV--- 255
+ P LPG G P G+ P GP G++G G G P G
Sbjct: 1094 PGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGG 1153
Query: 256 -------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAA 308
GP + AG G PG G G PG PG +PG+ G G G
Sbjct: 1154 GGHPGQPGPPGEKGKPGQDGIPGPAGQKGE-PGQPGFGNPGPPG-LPGLSGQKGDG---- 1207
Query: 309 AAAAAAAAKAAKYGAAAGL--VPGGPGFGPGVVGVPGA-GVPGV----GVPGAGIPVVPG 361
GL +PG PG PG G PG G PGV G PG+ P + G
Sbjct: 1208 -----------------GLPGIPGNPGL-PGPKGEPGFHGFPGVQGPPGPPGSPGPALEG 1249
Query: 362 A-------GIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG--VGAGG 408
G PG P G+ PE G + G G+P G G
Sbjct: 1250 PKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQG 1309
Query: 409 FPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPG 468
PG G G PG+ G+ G G+PGV G PG+ P +A + GL+ G PG
Sbjct: 1310 PPGLQ-GNPGRPGLNGMKGDPGLPGVPGFPGMK-GPSGVPGSAGPEGEPGLIGPPG-PPG 1366
Query: 469 VGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLR 527
+ G + + G PG+ PG+ PG GP G+
Sbjct: 1367 LPGPSGQSI-----IIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRN---- 1417
Query: 528 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 579
GL G G G G PGL G GL G G PG + A
Sbjct: 1418 ---GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVA 1465
Score = 121 bits (304), Expect = 2e-27
Identities = 187/666 (28%), Positives = 228/666 (34%), Gaps = 128/666 (19%)
Query: 93 PGGVADAAA--AYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVG 150
PG D + K + GL G PG+ G P P G PG G
Sbjct: 34 PGSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRG 93
Query: 151 LPGVYPGGVLPGARFPGVGVLPGVP--TGAGVKPKAPGVGG-----AFAGIPGVGPFGGP 203
PG LPG FPG LPG+P GA PG G F G PG GP
Sbjct: 94 PPG------LPG--FPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGP 145
Query: 204 --QPGVP--LGYP--IKAPKLPGGYGLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTGVG 256
PG+P G P I LPG G P GY GP G+ G G G P +G
Sbjct: 146 PGPPGIPGMKGEPGSIIMSSLPGPKGNP--------GYPGPPGIQGLPGPTGIP--GPIG 195
Query: 257 PQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI----------PGIGGIAGVGTP 306
P G G++ G G+PG G + G G+ G P
Sbjct: 196 P---------------PGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP 240
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPG-----------AGVPGV-GVP 352
+ ++ +PG GP PG+ G PG G PG G P
Sbjct: 241 PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKP 300
Query: 353 G-------AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYG---ARPGVGVGGIPT 401
G GIP +PG G PG PG + G RPG G+
Sbjct: 301 GKDGENGQPGIPGLPGDPGYPGE--PGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEK 358
Query: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG--VGGVPGVGISPEAQAAAAAKAAKYGL 459
+G G PG G G PG+ G PG+ G PG V G PG P + +
Sbjct: 359 GNIGLPGLPG-EKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGIS 417
Query: 460 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA-PGVGVAPGIGPGGVAAAAKSAA 518
+PG PG+ PG PG G + P + PG PG PG +
Sbjct: 418 IPG---PPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPG-SPGDKGLQGEQGV 473
Query: 519 KVAAKAQLRAAAGLG----------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA 568
K G G G+PG +G PG G G G+PG
Sbjct: 474 KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPG 533
Query: 569 VPGALAAAKAAKYGAAV---PGVLGGLGALGGVGIPG--GVVGA----------GPAAAA 613
PGA + + PG+ G G LG G PG G+ G GP
Sbjct: 534 APGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593
Query: 614 AAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGL 673
+ G G GL G +G +G PG G PP + GVA PG
Sbjct: 594 GGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFG-----PPGPVGEKGIQGVAGNPG--- 644
Query: 674 SPIFPG 679
P PG
Sbjct: 645 QPGIPG 650
Score = 65.1 bits (157), Expect = 2e-10
Identities = 110/393 (27%), Positives = 131/393 (33%), Gaps = 75/393 (19%)
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA 354
G+ AG+ A + A AA YG + PG G+ G G G PG+
Sbjct: 5 GVSLAAGLFLLALSLWGQPAEAAACYGCS----PGSKCDCSGIKGEKGERGFPGL----- 55
Query: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
G PG +PG PE G R G GIP G G G
Sbjct: 56 -------EGHPG--LPGFPGPEGPP---------GPRGQKGDDGIP----GPPGPKGIR- 92
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
G G+PG G PG+ G+PG G PG P+ + G PG PG+ PG
Sbjct: 93 GPPGLPGFPGTPGLPGMPGHDGAPG----PQGIPGCNGTKGERGF-PGSPGFPGLQGPPG 147
Query: 475 VGVAPGVGLAPG---VGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLR 527
PG+ PG + PG PG PGI GP G+
Sbjct: 148 PPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGP----------- 196
Query: 528 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA-----GVPGFGAVPGALAAAKAAKYG 582
G PGL G PGL G GL G G PG K
Sbjct: 197 ------PGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRP 250
Query: 583 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLG 642
V G G G G PG GP K + + G G G G G G
Sbjct: 251 IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEK--GEKGEQGEPGKRGKPGKD-GENG 307
Query: 643 VPGVGGLGGIP-----PAAAAKAAKYGVAARPG 670
PG+ GL G P P + + G PG
Sbjct: 308 QPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPG 340
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 167 bits (424), Expect = 2e-41
Identities = 216/712 (30%), Positives = 265/712 (37%), Gaps = 157/712 (22%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G PG P G+ G PG G G G G GKP K G G
Sbjct: 267 GPPG--PPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG-------------- 310
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVVPQPGAGVK 142
+PG D G G PG G G + P PG V+P+PG G+
Sbjct: 311 -----IPGLPGDP-----------GYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGIT 354
Query: 143 PGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
G+ +GLPG LPG + FPG+ PG+P G P F G G
Sbjct: 355 IGEKGNIGLPG------LPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQK 408
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG-----------YGPGGVAGAAGKA 247
GP PG+ + P PG GLP G P G GP G G+ G
Sbjct: 409 GDEGP-PGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIPPSDEICEPGPPGPPGSPGDK 465
Query: 248 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G GV K F G+ G G+PG+PG +G G
Sbjct: 466 GLQGEQGV-------KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKG 518
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-----AGVPG----VGVPGA-GIP 357
A A GA PG PGF PG G PG G+ G +G PGA G+P
Sbjct: 519 QAGATGPKGLPGIPGA-----PGAPGF-PGSKGEPGDILTFPGMKGDKGELGSPGAPGLP 572
Query: 358 VVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--- 413
+PG PG +PG+ P+ + G G+ G+P +G G PGFG
Sbjct: 573 GLPGT--PGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFGPPG 629
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 472
VG GI GVAG PG G+PG G PG I+ + + G V G+ PG+
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDV-GLPGDPGLPGQ 688
Query: 473 PGVGVAPGVGLAPGVGVAPGVGV--APGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAA 529
PG+ PG PG+ PG+G+ PG PGI GP G
Sbjct: 689 PGLPGIPGSKGEPGI---PGIGLPGPPGPKGFPGIPGPPGAPGT---------------- 729
Query: 530 AGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVL 589
G GL G PG G PG + G PG +PG A K PG
Sbjct: 730 ----PGRIGLEGPPGPPGFPGPKGEPGFAL-PGPPGPPGLPG-FKGALGPKGDRGFPGPP 783
Query: 590 GGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGV----GGLGVPG 645
G G G G+PG GP Q G +G GL G+GV G G+PG
Sbjct: 784 GPPGRTGLDGLPGPKGDVGP------------NGQPGPMGPPGLPGIGVQGPPGPPGIPG 831
Query: 646 -VG--GLGGIP-------------PAAAAKAAKYGVAARPGFGLSPIFPGGA 681
+G GL GIP P + G+ PG PI P G+
Sbjct: 832 PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPG----PIGPPGS 879
Score = 164 bits (415), Expect = 3e-40
Identities = 227/742 (30%), Positives = 273/742 (36%), Gaps = 149/742 (20%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLG 80
P P G PG P G PG G L G GALGP G P P G G GL
Sbjct: 738 PPGPPGFPG--PKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGR---TGLD 792
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP--QPG 138
P G + P G G G PG+ G+GV P PG P QPG
Sbjct: 793 GLPGPK--GDVGPNGQP-------------GPMGPPGLPGIGVQGPPGPPGIPGPIGQPG 837
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG- 196
PG+ G PG+ G PG R PG+ PG P G P PG GA +G PG
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGP-PGERGSPGIPGAPG-PIGPPGSPGLPGKAGA-SGFPGT 894
Query: 197 ---VGPFGGPQPGVPLGYPIKA--------PKLPGGYGLPYTTGK--------LPYGYGP 237
+G G P P PLG P ++ L G GLP TG+ LP GP
Sbjct: 895 KGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGP 954
Query: 238 G-----GVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGV----GGAGV 287
G G G+ G P GV GP+ +G G LPG G G+
Sbjct: 955 MDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPG-LPGPPGPKGNPGL 1013
Query: 288 PGVPGAI--PGIGGIAG-------------------VGTPAAAAAAAAAAKAAKYGAAAG 326
PG PG I PG+ G G G P + G ++
Sbjct: 1014 PGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI 1073
Query: 327 LVPG--GPGFGPGVVGVPG-AGVPG-VGVPGA-GIPVVPGA----GIPG-AAVPGVVSPE 376
+PG GP PG+ G PG G+ G VG PG G+P PGA G+PG PG P+
Sbjct: 1074 GLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPK 1133
Query: 377 AAAKAAAKAAKYGARPGVGVGGIPTY-------------GV-------GAGGFPGFG-VG 415
+ G VG GG P G+ G G PGFG G
Sbjct: 1134 GISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG 1193
Query: 416 VGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 475
G+PG++G G GG+PG+ G PG+ P+ + PG PGV PG
Sbjct: 1194 PPGLPGLSGQKGDGGLPGIPGNPGLP-GPKGE-------------PGFHGFPGVQGPPGP 1239
Query: 476 GVAPGVGLA-----PGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAA 529
+PG L PG PG PG PG+ G GG+ + +
Sbjct: 1240 PGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLK 1299
Query: 530 AGLGA----------------GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 573
G G PGL G PG+ +GVPG G PG PG
Sbjct: 1300 GDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPP 1359
Query: 574 AAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 633
+ + G G G G G+ G GP + GL G G
Sbjct: 1360 GLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGA 1419
Query: 634 GG-LGVGGL-GVPGVGGLGGIP 653
GG G GL G PG GL G P
Sbjct: 1420 GGRKGDPGLPGQPGTRGLDGPP 1441
Score = 156 bits (395), Expect = 5e-38
Identities = 221/714 (30%), Positives = 264/714 (36%), Gaps = 158/714 (22%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGA-GLGALGGGALGPGGK 61
G + PG +L + G PGA G+PG PG GL L G PGG
Sbjct: 539 GFPGSKGEPGDILTFPGMKGDKGELGSPGA--PGLPGLPGTPGQDGLPGLPGPKGEPGGI 596
Query: 62 PLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL 121
K G GL G + PG PG V + K + AG G PG+ G
Sbjct: 597 TFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGE-----KGIQGVAGNPGQPGIPG- 650
Query: 122 GVSAAPSVPGAVVPQPGAGVKPGKVPG----VGLPGVYPGGVLPGARFPGVGVLPGVPTG 177
PG + QPG PG PG VGLPG PG LPG PG LPG+P
Sbjct: 651 ----PKGDPGQTITQPGKPGLPGN-PGRDGDVGLPGD-PG--LPGQ--PG---LPGIPGS 697
Query: 178 AGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
G GIPG+G P P P G+P +PG G P T G++ GP
Sbjct: 698 KGEP-----------GIPGIGL---PGPPGPKGFP----GIPGPPGAPGTPGRIGLE-GP 738
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G G G P GP G G L G G PG PG PG
Sbjct: 739 PGPPGFPGPKGEPGFALPGPPGPPGLP---------GFKGALGPKGDRGFPGPPGP-PGR 788
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGL----VPGGPGFGPGVVGVPGA-GVPGV--- 349
G+ G+ P G+ PG PG PG +G PG G+PG
Sbjct: 789 TGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGI-PGPIGQPGLHGIPGEKGD 847
Query: 350 -GVPGAGIPVVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
G PG +P PG GIPGA PG + P + KA
Sbjct: 848 PGPPGLDVPGPPGERGSPGIPGA--PGPIGPPGSPGLPGKA------------------- 886
Query: 405 GAGGFPGFG-----VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
GA GFPG +G G PG G+PG GVPG+ G G+ P K +K
Sbjct: 887 GASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGE- 945
Query: 460 VPGVGVAPG------VGVA-----PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GP 507
PG+ PG +G PG+ PGV G PG PG+ PG+ GP
Sbjct: 946 -PGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGP 1004
Query: 508 GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFG 567
G L GL G PGL +G G GV G +GVPG
Sbjct: 1005 PGPKG----------NPGLPGQPGL-IGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Query: 568 AVPGALAAAKAAKYGAAVPGVLGGLG--ALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 625
PG +PG G G + +G+PG GP
Sbjct: 1054 GSPG-------------LPGQKGDKGDPGISSIGLPGL---PGPKGEP------------ 1085
Query: 626 GLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
GL G G G+ G +G PG+ GL G P A G PGF +P PG
Sbjct: 1086 GLPGYPGNPGIK-GSVGDPGLPGLPGTPGAK-------GQPGLPGFPGTPGPPG 1131
Score = 142 bits (357), Expect = 1e-33
Identities = 207/722 (28%), Positives = 262/722 (36%), Gaps = 125/722 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPG--GLAGAGLGA 77
P P G+ G P G+PG +PG GL + G GA GP G +PG G G
Sbjct: 85 PPGPKGIRG--PPGLPG---FPGTPGLPGMPGHDGAPGPQG-----IPGCNGTKGERGFP 134
Query: 78 GLGAFPAVTFPGAL--VPGGVADAAAAYKAAKAGA----------GLGGVPGVGGLGVSA 125
G FP + P +PG + + ++ G G+ G+PG G+
Sbjct: 135 GSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPI 194
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 185
P P ++ PG PG +GL P G G P P G + K P
Sbjct: 195 GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG----PPGPPGQISEQKRP 250
Query: 186 GVGGAF----AGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPG 238
+ F G+PG GP G P P G P G G P GK G
Sbjct: 251 -IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQP 309
Query: 239 GVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGAGVPGVPG- 292
G+ G G GYP G G + G+ G G G+PG+PG
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 293 ----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVP 347
PGI G G+ P AA PG PGF PG G G G P
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGP--------------PGPPGF-PGERGQKGDEGPP 414
Query: 348 GVGVPGA----GIPVVPG-AGIPGAAVPGVVSPEAAAKAA-----AKAAKYGARPGVGVG 397
G+ +PG G P PG G PG A P + + + G + GV
Sbjct: 415 GISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVK 474
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G G F G G+ G PG G+PG+ G PG G PG + + A
Sbjct: 475 G----DKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG----QKGEKGQAGATGPK 526
Query: 458 GLVPGVGVAPGVGVAPGVGVAPGVGL-------------APGVGVAPGVGVAPGVGVAPG 504
GL PG+ APG PG PG L +PG PG+ PG PG
Sbjct: 527 GL-PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPG 585
Query: 505 I-GPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGV--GAGVPGLGVG 560
+ GP G + K + G G+PG +G PG G G G+
Sbjct: 586 LPGPKG------EPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGV 639
Query: 561 AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAA 620
AG PG +PG PG+ G G G VG+PG G
Sbjct: 640 AGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLP------- 692
Query: 621 KAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIF 677
G+ G+ G G+ G+G G PG G GI PP A + G+ PG P F
Sbjct: 693 -----GIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPG---PPGF 744
Query: 678 PG 679
PG
Sbjct: 745 PG 746
Score = 141 bits (356), Expect = 2e-33
Identities = 199/646 (30%), Positives = 240/646 (37%), Gaps = 131/646 (20%)
Query: 23 PSRPG-----GVPGAI-PGGVPGGVFYPG-AGLGALGG-----GALGPGGKP-------L 63
P PG G+PGA P G PG PG AG G G +GP G P
Sbjct: 856 PGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGR 915
Query: 64 KPVPG-----GLAGA-GLGAGLGAFPAVTFPGALVPGGVADA-AAAYKAAKAGAGLGGVP 116
VPG GL G GL G + PG P G D K K GL G+P
Sbjct: 916 SGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIP 975
Query: 117 GVGG-LGVSAAPSVPG--AVVPQPGAGVKPGKVPGVGLPGVYPG--------GVLPGARF 165
GV G G P PG + QPG PG GLPG PG G + F
Sbjct: 976 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPG-QPGLIGPPGLKGTIGDMGF 1034
Query: 166 PGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPGVGPFGGP-------QPGVPLGYP-- 212
PG + G P +GV +P +PG+ G G PG+ G P +PG+P GYP
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP-GYPGN 1093
Query: 213 ------IKAPKLPGGYGLPYTTGK--------LPYGYGPGGVAGAAGKAGYPTGTGV--- 255
+ P LPG G P G+ P GP G++G G G P G
Sbjct: 1094 PGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGG 1153
Query: 256 -------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAA 308
GP + AG G PG G G PG PG +PG+ G G G
Sbjct: 1154 GGHPGQPGPPGEKGKPGQDGIPGPAGQKGE-PGQPGFGNPGPPG-LPGLSGQKGDG---- 1207
Query: 309 AAAAAAAAKAAKYGAAAGL--VPGGPGFGPGVVGVPGA-GVPGV----GVPGAGIPVVPG 361
GL +PG PG PG G PG G PGV G PG+ P + G
Sbjct: 1208 -----------------GLPGIPGNPGL-PGPKGEPGFHGFPGVQGPPGPPGSPGPALEG 1249
Query: 362 A-GIPGA----AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG--VGAGGFPGFGV 414
G PG PG+ PE G + G G+P G G PG
Sbjct: 1250 PKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQ- 1308
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
G G PG+ G+ G G+PGV G PG+ P +A + GL+ G PG+ G
Sbjct: 1309 GNPGRPGLNGMKGDPGLPGVPGFPGMK-GPSGVPGSAGPEGEPGLIGPPG-PPGLPGPSG 1366
Query: 475 VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLG 533
+ + G PG+ PG+ PG GP G+ GL
Sbjct: 1367 QSI-----IIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRN-------GL- 1413
Query: 534 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 579
G G G G PGL G GL G G PG + A
Sbjct: 1414 PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVA 1459
Score = 121 bits (304), Expect = 2e-27
Identities = 187/666 (28%), Positives = 228/666 (34%), Gaps = 128/666 (19%)
Query: 93 PGGVADAAA--AYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVG 150
PG D + K + GL G PG+ G P P G PG G
Sbjct: 34 PGSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRG 93
Query: 151 LPGVYPGGVLPGARFPGVGVLPGVP--TGAGVKPKAPGVGG-----AFAGIPGVGPFGGP 203
PG LPG FPG LPG+P GA PG G F G PG GP
Sbjct: 94 PPG------LPG--FPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGP 145
Query: 204 --QPGVP--LGYP--IKAPKLPGGYGLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTGVG 256
PG+P G P I LPG G P GY GP G+ G G G P +G
Sbjct: 146 PGPPGIPGMKGEPGSIIMSSLPGPKGNP--------GYPGPPGIQGLPGPTGIP--GPIG 195
Query: 257 PQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI----------PGIGGIAGVGTP 306
P G G++ G G+PG G + G G+ G P
Sbjct: 196 P---------------PGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP 240
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPG-----------AGVPGV-GVP 352
+ ++ +PG GP PG+ G PG G PG G P
Sbjct: 241 PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKP 300
Query: 353 G-------AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYG---ARPGVGVGGIPT 401
G GIP +PG G PG PG + G RPG G+
Sbjct: 301 GKDGENGQPGIPGLPGDPGYPGE--PGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEK 358
Query: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG--VGGVPGVGISPEAQAAAAAKAAKYGL 459
+G G PG G G PG+ G PG+ G PG V G PG P + +
Sbjct: 359 GNIGLPGLPG-EKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGIS 417
Query: 460 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA-PGVGVAPGIGPGGVAAAAKSAA 518
+PG PG+ PG PG G + P + PG PG PG +
Sbjct: 418 IPG---PPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPG-SPGDKGLQGEQGV 473
Query: 519 KVAAKAQLRAAAGLG----------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA 568
K G G G+PG +G PG G G G+PG
Sbjct: 474 KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPG 533
Query: 569 VPGALAAAKAAKYGAAV---PGVLGGLGALGGVGIPG--GVVGA----------GPAAAA 613
PGA + + PG+ G G LG G PG G+ G GP
Sbjct: 534 APGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593
Query: 614 AAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGL 673
+ G G GL G +G +G PG G PP + GVA PG
Sbjct: 594 GGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFG-----PPGPVGEKGIQGVAGNPG--- 644
Query: 674 SPIFPG 679
P PG
Sbjct: 645 QPGIPG 650
Score = 65.1 bits (157), Expect = 2e-10
Identities = 110/393 (27%), Positives = 131/393 (33%), Gaps = 75/393 (19%)
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA 354
G+ AG+ A + A AA YG + PG G+ G G G PG+
Sbjct: 5 GVSLAAGLFLLALSLWGQPAEAAACYGCS----PGSKCDCSGIKGEKGERGFPGL----- 55
Query: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
G PG +PG PE G R G GIP G G G
Sbjct: 56 -------EGHPG--LPGFPGPEGPP---------GPRGQKGDDGIP----GPPGPKGIR- 92
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
G G+PG G PG+ G+PG G PG P+ + G PG PG+ PG
Sbjct: 93 GPPGLPGFPGTPGLPGMPGHDGAPG----PQGIPGCNGTKGERGF-PGSPGFPGLQGPPG 147
Query: 475 VGVAPGVGLAPG---VGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLR 527
PG+ PG + PG PG PGI GP G+
Sbjct: 148 PPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGP----------- 196
Query: 528 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA-----GVPGFGAVPGALAAAKAAKYG 582
G PGL G PGL G GL G G PG K
Sbjct: 197 ------PGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRP 250
Query: 583 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLG 642
V G G G G PG GP K + + G G G G G G
Sbjct: 251 IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEK--GEKGEQGEPGKRGKPGKD-GENG 307
Query: 643 VPGVGGLGGIP-----PAAAAKAAKYGVAARPG 670
PG+ GL G P P + + G PG
Sbjct: 308 QPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPG 340
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 167 bits (424), Expect = 2e-41
Identities = 216/712 (30%), Positives = 265/712 (37%), Gaps = 157/712 (22%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G PG P G+ G PG G G G G GKP K G G
Sbjct: 267 GPPG--PPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPG-------------- 310
Query: 87 FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG----LGVSAAPSVPGAVVPQPGAGVK 142
+PG D G G PG G G + P PG V+P+PG G+
Sbjct: 311 -----IPGLPGDP-----------GYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGIT 354
Query: 143 PGKVPGVGLPGVYPGGVLPGAR----FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
G+ +GLPG LPG + FPG+ PG+P G P F G G
Sbjct: 355 IGEKGNIGLPG------LPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQK 408
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG-----------YGPGGVAGAAGKA 247
GP PG+ + P PG GLP G P G GP G G+ G
Sbjct: 409 GDEGP-PGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIPPSDEICEPGPPGPPGSPGDK 465
Query: 248 GYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G GV K F G+ G G+PG+PG +G G
Sbjct: 466 GLQGEQGV-------KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKG 518
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-----AGVPG----VGVPGA-GIP 357
A A GA PG PGF PG G PG G+ G +G PGA G+P
Sbjct: 519 QAGATGPKGLPGIPGA-----PGAPGF-PGSKGEPGDILTFPGMKGDKGELGSPGAPGLP 572
Query: 358 VVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--- 413
+PG PG +PG+ P+ + G G+ G+P +G G PGFG
Sbjct: 573 GLPGT--PGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFGPPG 629
Query: 414 -VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVA 472
VG GI GVAG PG G+PG G PG I+ + + G V G+ PG+
Sbjct: 630 PVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDV-GLPGDPGLPGQ 688
Query: 473 PGVGVAPGVGLAPGVGVAPGVGV--APGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAA 529
PG+ PG PG+ PG+G+ PG PGI GP G
Sbjct: 689 PGLPGIPGSKGEPGI---PGIGLPGPPGPKGFPGIPGPPGAPGT---------------- 729
Query: 530 AGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVL 589
G GL G PG G PG + G PG +PG A K PG
Sbjct: 730 ----PGRIGLEGPPGPPGFPGPKGEPGFAL-PGPPGPPGLPG-FKGALGPKGDRGFPGPP 783
Query: 590 GGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGV----GGLGVPG 645
G G G G+PG GP Q G +G GL G+GV G G+PG
Sbjct: 784 GPPGRTGLDGLPGPKGDVGP------------NGQPGPMGPPGLPGIGVQGPPGPPGIPG 831
Query: 646 -VG--GLGGIP-------------PAAAAKAAKYGVAARPGFGLSPIFPGGA 681
+G GL GIP P + G+ PG PI P G+
Sbjct: 832 PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPG----PIGPPGS 879
Score = 162 bits (410), Expect = 1e-39
Identities = 212/680 (31%), Positives = 259/680 (38%), Gaps = 93/680 (13%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA----GLGALGG--GALGPGGKPLKPVPGGLAGAGLG 76
P P G+PG G PG PG GL + G G GP G + PG G+
Sbjct: 809 PMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIP 868
Query: 77 AGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPG---- 131
G PG +PG A+ + K G+ G PG G LG+ VPG
Sbjct: 869 GAPGPIGPPGSPG--LPGKAG--ASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGD 924
Query: 132 -AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG- 189
+ QPG G+ G PG+ PG PG P + G G+ P PGV G
Sbjct: 925 DGLQGQPGLPGPTGEKGSKGEPGL-PGP--PGPMDPNLLGSKGEKGEPGL-PGIPGVSGP 980
Query: 190 -AFAGIPGVG--PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK 246
+ G+PG P QPG+P G P PK G GLP G + GP G+ G G
Sbjct: 981 KGYQGLPGDPGQPGLSGQPGLP-GPP--GPK--GNPGLPGQPGLI----GPPGLKGTIGD 1031
Query: 247 AGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVL--PGVGGAGVPGVPG--------AIP 295
G+P GV GP + + + G G PG+ G+PG+PG P
Sbjct: 1032 MGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYP 1091
Query: 296 GIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG-V 349
G GI G VG P + PG PGF PG G PG +G PG
Sbjct: 1092 GNPGIKGSVGDPGLPGLPGTPGAKGQ--------PGLPGF-PGTPGPPGPKGISGPPGNP 1142
Query: 350 GVPGAGIPVVPGAGIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGVGGIP----- 400
G+PG PV G G PG P G + A + + G +PG G G P
Sbjct: 1143 GLPGEPGPV-GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG-QPGFGNPGPPGLPGL 1200
Query: 401 TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLV 460
+ G GG PG G G+PG G PG G PGV G PG P A + K
Sbjct: 1201 SGQKGDGGLPGIP-GNPGLPGPKGEPGFHGFPGVQGPPG----PPGSPGPALEGPKGNPG 1255
Query: 461 P-GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAK 515
P G PG PG PG+ G+ G PG+ PG+ GP G+
Sbjct: 1256 PQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPG 1315
Query: 516 SAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA 575
K G PGL G PG+ +GVPG G PG PG
Sbjct: 1316 RPGLNGMK-----------GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGL 1364
Query: 576 AKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 635
+ + G G G G G+ G GP + GL G G GG
Sbjct: 1365 PGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGG 1424
Query: 636 -LGVGGL-GVPGVGGLGGIP 653
G GL G PG GL G P
Sbjct: 1425 RKGDPGLPGQPGTRGLDGPP 1444
Score = 156 bits (395), Expect = 5e-38
Identities = 221/714 (30%), Positives = 264/714 (36%), Gaps = 158/714 (22%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGA-GLGALGGGALGPGGK 61
G + PG +L + G PGA G+PG PG GL L G PGG
Sbjct: 539 GFPGSKGEPGDILTFPGMKGDKGELGSPGA--PGLPGLPGTPGQDGLPGLPGPKGEPGGI 596
Query: 62 PLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL 121
K G GL G + PG PG V + K + AG G PG+ G
Sbjct: 597 TFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGE-----KGIQGVAGNPGQPGIPG- 650
Query: 122 GVSAAPSVPGAVVPQPGAGVKPGKVPG----VGLPGVYPGGVLPGARFPGVGVLPGVPTG 177
PG + QPG PG PG VGLPG PG LPG PG LPG+P
Sbjct: 651 ----PKGDPGQTITQPGKPGLPGN-PGRDGDVGLPGD-PG--LPGQ--PG---LPGIPGS 697
Query: 178 AGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
G GIPG+G P P P G+P +PG G P T G++ GP
Sbjct: 698 KGEP-----------GIPGIGL---PGPPGPKGFP----GIPGPPGAPGTPGRIGLE-GP 738
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G G G P GP G G L G G PG PG PG
Sbjct: 739 PGPPGFPGPKGEPGFALPGPPGPPGLP---------GFKGALGPKGDRGFPGPPGP-PGR 788
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGL----VPGGPGFGPGVVGVPGA-GVPGV--- 349
G+ G+ P G+ PG PG PG +G PG G+PG
Sbjct: 789 TGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGI-PGPIGQPGLHGIPGEKGD 847
Query: 350 -GVPGAGIPVVPGA----GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
G PG +P PG GIPGA PG + P + KA
Sbjct: 848 PGPPGLDVPGPPGERGSPGIPGA--PGPIGPPGSPGLPGKA------------------- 886
Query: 405 GAGGFPGFG-----VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
GA GFPG +G G PG G+PG GVPG+ G G+ P K +K
Sbjct: 887 GASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGE- 945
Query: 460 VPGVGVAPG------VGVA-----PGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GP 507
PG+ PG +G PG+ PGV G PG PG+ PG+ GP
Sbjct: 946 -PGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGP 1004
Query: 508 GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFG 567
G L GL G PGL +G G GV G +GVPG
Sbjct: 1005 PGPKG----------NPGLPGQPGL-IGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Query: 568 AVPGALAAAKAAKYGAAVPGVLGGLG--ALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 625
PG +PG G G + +G+PG GP
Sbjct: 1054 GSPG-------------LPGQKGDKGDPGISSIGLPGL---PGPKGEP------------ 1085
Query: 626 GLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
GL G G G+ G +G PG+ GL G P A G PGF +P PG
Sbjct: 1086 GLPGYPGNPGIK-GSVGDPGLPGLPGTPGAK-------GQPGLPGFPGTPGPPG 1131
Score = 142 bits (357), Expect = 1e-33
Identities = 207/722 (28%), Positives = 262/722 (36%), Gaps = 125/722 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPG--GLAGAGLGA 77
P P G+ G P G+PG +PG GL + G GA GP G +PG G G
Sbjct: 85 PPGPKGIRG--PPGLPG---FPGTPGLPGMPGHDGAPGPQG-----IPGCNGTKGERGFP 134
Query: 78 GLGAFPAVTFPGAL--VPGGVADAAAAYKAAKAGA----------GLGGVPGVGGLGVSA 125
G FP + P +PG + + ++ G G+ G+PG G+
Sbjct: 135 GSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPI 194
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAP 185
P P ++ PG PG +GL P G G P P G + K P
Sbjct: 195 GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG----PPGPPGQISEQKRP 250
Query: 186 GVGGAF----AGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPG 238
+ F G+PG GP G P P G P G G P GK G
Sbjct: 251 -IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQP 309
Query: 239 GVAGAAGKAGYPTGTG----VGPQAAAAAAAKAAAKFGAGAAGVLPG-VGGAGVPGVPG- 292
G+ G G GYP G G + G+ G G G+PG+PG
Sbjct: 310 GIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGE 369
Query: 293 ----AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVP 347
PGI G G+ P AA PG PGF PG G G G P
Sbjct: 370 KGERGFPGIQGPPGLPGPPGAAVMGP--------------PGPPGF-PGERGQKGDEGPP 414
Query: 348 GVGVPGA----GIPVVPG-AGIPGAAVPGVVSPEAAAKAA-----AKAAKYGARPGVGVG 397
G+ +PG G P PG G PG A P + + + G + GV
Sbjct: 415 GISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVK 474
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
G G F G G+ G PG G+PG+ G PG G PG + + A
Sbjct: 475 G----DKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG----QKGEKGQAGATGPK 526
Query: 458 GLVPGVGVAPGVGVAPGVGVAPGVGL-------------APGVGVAPGVGVAPGVGVAPG 504
GL PG+ APG PG PG L +PG PG+ PG PG
Sbjct: 527 GL-PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPG 585
Query: 505 I-GPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGIPGLGVGVGVPGLGV--GAGVPGLGVG 560
+ GP G + K + G G+PG +G PG G G G+
Sbjct: 586 LPGPKG------EPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGV 639
Query: 561 AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAA 620
AG PG +PG PG+ G G G VG+PG G
Sbjct: 640 AGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLP------- 692
Query: 621 KAAQFGLVGAAGLGGL-GVGGLGVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIF 677
G+ G+ G G+ G+G G PG G GI PP A + G+ PG P F
Sbjct: 693 -----GIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPG---PPGF 744
Query: 678 PG 679
PG
Sbjct: 745 PG 746
Score = 140 bits (352), Expect = 5e-33
Identities = 199/649 (30%), Positives = 240/649 (36%), Gaps = 134/649 (20%)
Query: 23 PSRPG-----GVPGAI-PGGVPGGVFYPG-AGLGALGG-----GALGPGGKP-------L 63
P PG G+PGA P G PG PG AG G G +GP G P
Sbjct: 856 PGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGR 915
Query: 64 KPVPG-----GLAGA-GLGAGLGAFPAVTFPGALVPGGVADA-AAAYKAAKAGAGLGGVP 116
VPG GL G GL G + PG P G D K K GL G+P
Sbjct: 916 SGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIP 975
Query: 117 GVGG-LGVSAAPSVPG--AVVPQPGAGVKPGKVPGVGLPGVYPG--------GVLPGARF 165
GV G G P PG + QPG PG GLPG PG G + F
Sbjct: 976 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPG-QPGLIGPPGLKGTIGDMGF 1034
Query: 166 PGVGVLPGVPTGAGV--KPKAPGVGGAFA--GIPGVGPFGGP-------QPGVPLGYP-- 212
PG + G P +GV +P +PG+ G G PG+ G P +PG+P GYP
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP-GYPGN 1093
Query: 213 ------IKAPKLPGGYGLPYTTGK--------LPYGYGPGGVAGAAGKAGYPTGTGV--- 255
+ P LPG G P G+ P GP G++G G G P G
Sbjct: 1094 PGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGG 1153
Query: 256 -------GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAA 308
GP + AG G PG G G PG PG +PG+ G G G
Sbjct: 1154 GGHPGQPGPPGEKGKPGQDGIPGPAGQKGE-PGQPGFGNPGPPG-LPGLSGQKGDG---- 1207
Query: 309 AAAAAAAAKAAKYGAAAGL--VPGGPGFGPGVVGVPGA-GVPGV----GVPGAGIPVVPG 361
GL +PG PG PG G PG G PGV G PG+ P + G
Sbjct: 1208 -----------------GLPGIPGNPGL-PGPKGEPGFHGFPGVQGPPGPPGSPGPALEG 1249
Query: 362 A-GIPGAAVP-------GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG--VGAGGFPG 411
G PG P G+ PE G + G G+P G G PG
Sbjct: 1250 PKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPG 1309
Query: 412 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGV 471
G G PG+ G+ G G+PGV G PG+ P +A + GL+ G PG+
Sbjct: 1310 LQ-GNPGRPGLNGMKGDPGLPGVPGFPGMK-GPSGVPGSAGPEGEPGLIGPPG-PPGLPG 1366
Query: 472 APGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAA 530
G + + G PG+ PG+ PG GP G+
Sbjct: 1367 PSGQSI-----IIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRN------- 1414
Query: 531 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 579
GL G G G G PGL G GL G G PG + A
Sbjct: 1415 GL-PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVA 1462
Score = 121 bits (304), Expect = 2e-27
Identities = 187/666 (28%), Positives = 228/666 (34%), Gaps = 128/666 (19%)
Query: 93 PGGVADAAA--AYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVG 150
PG D + K + GL G PG+ G P P G PG G
Sbjct: 34 PGSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRG 93
Query: 151 LPGVYPGGVLPGARFPGVGVLPGVP--TGAGVKPKAPGVGG-----AFAGIPGVGPFGGP 203
PG LPG FPG LPG+P GA PG G F G PG GP
Sbjct: 94 PPG------LPG--FPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGP 145
Query: 204 --QPGVP--LGYP--IKAPKLPGGYGLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTGVG 256
PG+P G P I LPG G P GY GP G+ G G G P +G
Sbjct: 146 PGPPGIPGMKGEPGSIIMSSLPGPKGNP--------GYPGPPGIQGLPGPTGIP--GPIG 195
Query: 257 PQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI----------PGIGGIAGVGTP 306
P G G++ G G+PG G + G G+ G P
Sbjct: 196 P---------------PGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP 240
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPG-----------AGVPGV-GVP 352
+ ++ +PG GP PG+ G PG G PG G P
Sbjct: 241 PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKP 300
Query: 353 G-------AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYG---ARPGVGVGGIPT 401
G GIP +PG G PG PG + G RPG G+
Sbjct: 301 GKDGENGQPGIPGLPGDPGYPGE--PGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEK 358
Query: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG--VGGVPGVGISPEAQAAAAAKAAKYGL 459
+G G PG G G PG+ G PG+ G PG V G PG P + +
Sbjct: 359 GNIGLPGLPG-EKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGIS 417
Query: 460 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA-PGVGVAPGIGPGGVAAAAKSAA 518
+PG PG+ PG PG G + P + PG PG PG +
Sbjct: 418 IPG---PPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPG-SPGDKGLQGEQGV 473
Query: 519 KVAAKAQLRAAAGLG----------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA 568
K G G G+PG +G PG G G G+PG
Sbjct: 474 KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPG 533
Query: 569 VPGALAAAKAAKYGAAV---PGVLGGLGALGGVGIPG--GVVGA----------GPAAAA 613
PGA + + PG+ G G LG G PG G+ G GP
Sbjct: 534 APGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593
Query: 614 AAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGL 673
+ G G GL G +G +G PG G PP + GVA PG
Sbjct: 594 GGITFKGERGPPGNPGLPGLPG-NIGPMGPPGFG-----PPGPVGEKGIQGVAGNPG--- 644
Query: 674 SPIFPG 679
P PG
Sbjct: 645 QPGIPG 650
Score = 65.1 bits (157), Expect = 2e-10
Identities = 110/393 (27%), Positives = 131/393 (33%), Gaps = 75/393 (19%)
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA 354
G+ AG+ A + A AA YG + PG G+ G G G PG+
Sbjct: 5 GVSLAAGLFLLALSLWGQPAEAAACYGCS----PGSKCDCSGIKGEKGERGFPGL----- 55
Query: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
G PG +PG PE G R G GIP G G G
Sbjct: 56 -------EGHPG--LPGFPGPEGPP---------GPRGQKGDDGIP----GPPGPKGIR- 92
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
G G+PG G PG+ G+PG G PG P+ + G PG PG+ PG
Sbjct: 93 GPPGLPGFPGTPGLPGMPGHDGAPG----PQGIPGCNGTKGERGF-PGSPGFPGLQGPPG 147
Query: 475 VGVAPGVGLAPG---VGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAKVAAKAQLR 527
PG+ PG + PG PG PGI GP G+
Sbjct: 148 PPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGP----------- 196
Query: 528 AAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA-----GVPGFGAVPGALAAAKAAKYG 582
G PGL G PGL G GL G G PG K
Sbjct: 197 ------PGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRP 250
Query: 583 AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLG 642
V G G G G PG GP K + + G G G G G G
Sbjct: 251 IDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEK--GEKGEQGEPGKRGKPGKD-GENG 307
Query: 643 VPGVGGLGGIP-----PAAAAKAAKYGVAARPG 670
PG+ GL G P P + + G PG
Sbjct: 308 QPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPG 340
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 167 bits (424), Expect = 2e-41
Identities = 228/723 (31%), Positives = 286/723 (39%), Gaps = 112/723 (15%)
Query: 23 PSRPG--GVPGAIPG------GVPGGV----FYPGAGLGALGGGALGPGGKPLKPVPGGL 70
P PG G PG G G+PG + F G+ AL GG GP GK P P GL
Sbjct: 380 PGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPDGKRGPPGPPGL 439
Query: 71 AGA--------GL--GAGLGAFPAVT-FPGALVPGGVADAAAAYKAAKAGAGLGGVPGVG 119
G GL G FP + PGA P G A + + + G+PG+
Sbjct: 440 PGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGDEAIKGLPGLP 499
Query: 120 G----LGVSAAPSVPGAVVPQPGAGVKPG-----KVPG-VGLPGVYPGGVLPGAR---FP 166
G G++ P G PG PG VPG +G PG P G +R
Sbjct: 500 GPKGFAGINGEPGRKGD-RGDPGQHGLPGFPGLKGVPGNIGAPG--PKGAKGDSRTITTK 556
Query: 167 GVGVLPGVPTGAGVK--PKAPGVGG--AFAGIPG------VGPFGGP-QPGVPLGYPIKA 215
G PGVP G+K +PG G F G+PG GP G P PG+P
Sbjct: 557 GERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPG 616
Query: 216 PKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGA 275
P G GLP G+ + G G+ G G G P G Q K A G
Sbjct: 617 EMGPPGLGLPGLKGQRGFP-GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVG-GDRQ 674
Query: 276 AGVLPG-VGG-AGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYG-AAAGLVPGG 331
+ PG +GG G+PG+PG PG G G+ G P A A G A PG
Sbjct: 675 EAIQPGCIGGPKGLPGLPGP-PGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGP 733
Query: 332 PGF-GP----GVVGVPGA-GVPG-VGVPGAGIPVVPG-AGIPGAAVPGVVSPEAAAKAAA 383
PGF GP G VG+PG G PG +G+PG P PG G+PG + P A
Sbjct: 734 PGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGP--PGERGLPGEVLGAQPGPRGDA---- 787
Query: 384 KAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
G G+ G+P G G PGF G G+PG+ G+ G G+PG G PG+
Sbjct: 788 -----GVPGQPGLKGLP----GDRGPPGFR-GSQGMPGMPGLKGQPGLPGPSGQPGL--- 834
Query: 444 PEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAP 503
YG PG+ PG APG G+ PG PG PG AP
Sbjct: 835 -------------YG-PPGLHGFPG---APGQEGPLGLPGIPGREGLPGDRGDPGDTGAP 877
Query: 504 G-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAG 562
G +G G++ A + + G G+ G PGL G PG+ G
Sbjct: 878 GPVGMKGLSGDRGDAGFTGEQGHPGS-----PGFKGIDGMPGTPGLKGDRGSPGMDGFQG 932
Query: 563 VPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGAGPAAAAAAAKAAA 620
+PG PG +K +PG+ G G G G G G G P
Sbjct: 933 MPGLKGRPG-FPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPGMKDIKG 991
Query: 621 KAAQFGLVGAAG-LGGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFP 678
+ G +G G LG G+ G+ G+PG+ G+ G+P G PG P FP
Sbjct: 992 EKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGFP 1051
Query: 679 GGA 681
G A
Sbjct: 1052 GVA 1054
Score = 152 bits (383), Expect = 1e-36
Identities = 233/809 (28%), Positives = 289/809 (35%), Gaps = 190/809 (23%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPG--AGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLG 80
P RPG V P G PG PG G G LG G V G G G
Sbjct: 198 PGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYG-----VKGEKGDVG-QPGPN 251
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPG-A 139
P+ T + P GV YK K G G+ G+ G PG + PG +
Sbjct: 252 GIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPG-LRGYPGLS 310
Query: 140 GVK--PGKVPGVGLPGVY--------------PG-----------GVLPGAR----FPGV 168
G K PG+ GL G PG + GAR FPG
Sbjct: 311 GEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARGDPGFPGA 370
Query: 169 GVLP---GVPTGAGVKPKAPGV----GGAFAGIPG-VGPFGG-PQPGVPLGY-----PIK 214
P G P G+ P PG+ G G+PG +GP G PG+P Y P
Sbjct: 371 QGEPGSQGEPGDPGL-PGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPDG 429
Query: 215 APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGA 273
PG GLP G + +G G G AG G P G GP+ A + G
Sbjct: 430 KRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGD 489
Query: 274 GAAGVLPGVGG----AGVPGVPG--------------AIPGIGGIAG-VGTPAAAAAAAA 314
A LPG+ G AG+ G PG PG+ G+ G +G P A
Sbjct: 490 EAIKGLPGLPGPKGFAGINGEPGRKGDRGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGD 549
Query: 315 AAKAAKYGAAA--------------------GL-----VPGGPGFG-------PGVVGVP 342
+ G GL +PG PG G PG G+P
Sbjct: 550 SRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIP 609
Query: 343 GA-------GVPGVGVPG----------AGIPVVPG-AGIPG-AAVPGVVSPEAAAKAAA 383
G G PG+G+PG AG+P PG G PG A PG + + K A
Sbjct: 610 GTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAV 669
Query: 384 KAAKYGA-RPGV-----GVGGI-----PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVP 432
+ A +PG G+ G+ PT G G PGF G G PG G+PG G
Sbjct: 670 GGDRQEAIQPGCIGGPKGLPGLPGPPGPTGAKGLRGIPGF-AGADGGPGPRGLPGDAGRE 728
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG--VGLAPGVGVA 490
G G PG I P A G +G+ PG PG PG +G PG
Sbjct: 729 GFPGPPGF-IGPRGSKGAVGLPGPDGSPGPIGL-PGPDGPPGERGLPGEVLGAQPGPRGD 786
Query: 491 PGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG 549
GV PG+ PG GP G R + G+ G+PGL G PGL
Sbjct: 787 AGVPGQPGLKGLPGDRGPPG----------------FRGSQGM-PGMPGL---KGQPGLP 826
Query: 550 VGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGP 609
+G PGL G+ GF PG + +PG+ G G G G PG GP
Sbjct: 827 GPSGQPGLYGPPGLHGFPGAPG-------QEGPLGLPGIPGREGLPGDRGDPGDTGAPGP 879
Query: 610 AAAAAAAKAAAKAAQFGLVGAAGLGGL-GVGGL----------GVPGVGGLGGIP----- 653
+ A G G G G G+ G+ G PG+ G G+P
Sbjct: 880 VGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGR 939
Query: 654 ---PAAAAKAAKYGVAARPGFGLSPIFPG 679
P + +A +G+ G P F G
Sbjct: 940 PGFPGSKGEAGFFGIPGLKGLAGEPGFKG 968
Score = 136 bits (342), Expect = 7e-32
Identities = 224/778 (28%), Positives = 273/778 (35%), Gaps = 172/778 (22%)
Query: 26 PGGVPGAI----PGGVPGGVFYPGAGLGALGG--GALGPGGKP-LKPVPGGLAGAGLGAG 78
P G PG I P G PG PG LGA G G G G+P LK +PG G
Sbjct: 751 PDGSPGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGS 810
Query: 79 LGAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGGL-GVSAAPSVPGAV 133
G PG +PG + + G GL G PG G G P +PG
Sbjct: 811 QG------MPG--MPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGRE 862
Query: 134 VPQPGAGVKPGKV--PG-VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK--PKAPGVG 188
PG PG PG VG+ G+ G A F G PG P G+ P PG+
Sbjct: 863 -GLPGDRGDPGDTGAPGPVGMKGL--SGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLK 919
Query: 189 GAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G G PG+ F G P L G G P + G+ + +G G+ G AG+ G
Sbjct: 920 GD-RGSPGMDGFQG------------MPGLKGRPGFPGSKGEAGF-FGIPGLKGLAGEPG 965
Query: 249 YPTGTG----VGPQAAAAAAAK-----------AAAKFGAGAAGV--LPGVGG-AGVPGV 290
+ G GP K K GA G+ +PG+ G +G+PG+
Sbjct: 966 FKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGL 1025
Query: 291 PG---------------AIPGIGGIAGVGTPAAAAA----------AAAAAKAAKYGAAA 325
PG IPG+ G GV P A +A YG
Sbjct: 1026 PGRPGHIKGVKGDIGVPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIG 1085
Query: 326 GL-----------VPGGPGFGP--GVVGVPGA-------GVPG-VGVPG-AGIPVVPGA- 362
+PG PG G G+PG G G +G PG G+ V G
Sbjct: 1086 ATGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPP 1145
Query: 363 GIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF-GV-GVGGI 419
G+ G PG+ P + + G + G G P G GFPG G+ G+ G+
Sbjct: 1146 GLKGQTGFPGLTGPPGSQGELGRIGLPGGKGDDGWPGAP----GLPGFPGLRGIRGLHGL 1201
Query: 420 PGVAGVPG-----VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
PG G PG + G PG G PG P G G APG PG
Sbjct: 1202 PGTKGFPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQG-APGERGPPG 1260
Query: 475 VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI----------GPGGVAAAAKSAAKVAAKA 524
+PG+ PG+ + APG APGI GP G AA S
Sbjct: 1261 ---SPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPG 1317
Query: 525 QLRAAAGLG-------------AGIPGLGVGVGVPGLGVGAGVPGLGVG-------AGVP 564
G G+PG G G G G VG G P
Sbjct: 1318 APGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTG-AVGDRGPKGPKGDP 1376
Query: 565 GFGAVPGALAAAKAAKYG---AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 621
GF PG + A A A PG +G G G G PG + GP A K
Sbjct: 1377 GFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGK 1436
Query: 622 AAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
A G G GG+ VPG G G P + G RPG SP PG
Sbjct: 1437 A------GPQGRGGVS----AVPGFRGDEG-PIGHQGPIGQEGAPGRPG---SPGLPG 1480
Score = 118 bits (296), Expect = 2e-26
Identities = 212/727 (29%), Positives = 265/727 (36%), Gaps = 120/727 (16%)
Query: 44 PGAGLGALGGGALGP--GGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAA 101
P G GG P GG+ +P P G G GL FP + G D
Sbjct: 41 PCGGRDCSGGCQCYPEKGGRG-QPGPVGPQGYNGPPGLQGFPGLQ-------GRKGD--- 89
Query: 102 AYKAAKAGAGLGGVPG-VGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVL 160
K + G+ G G VG GVS P G + PG G G+ G G
Sbjct: 90 --KGERGAPGVTGPKGDVGARGVSGFPGADG-IPGHPGQGGPRGRPGYDGCNGTQGDSGP 146
Query: 161 PGARFPGVGVLPGVPTGAGVKPKAPGVGGAFA-------------GIPGVGPFGGPQPGV 207
G PG G P G K + G +A G PG+ F GP PG
Sbjct: 147 QGP--PGSEGFTGPPGPQGPKGQK---GEPYALPKEERDRYRGEPGEPGLVGFQGP-PGR 200
Query: 208 PLGY-----PIKAPKLPGGYGLPYTTGKLPY-GYGPGGVAGAAGKAGYPTGTGVGPQAAA 261
P G+ P+ AP PG G P G+ G G GV G G G P G+
Sbjct: 201 P-GHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKGEKGDVGQPGPNGIPSDTLH 259
Query: 262 AAAAKAAAKF------GAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV----GTPAAA 309
A F G + PG+ G + G G + PG+ G G+ G+P
Sbjct: 260 PIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQK 319
Query: 310 AAAAA-------AAKAAKYGAAAGLVPGGPGFGP---------GVVGVPGA-GVPGV-GV 351
+ + K A PG P + P G G PGA G PG G
Sbjct: 320 GSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARGDPGFPGAQGEPGSQGE 379
Query: 352 PG-AGIPVVPGAGIPGA----AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
PG G+P PG I +PG + P+ A YG PG P G
Sbjct: 380 PGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPDGKRGPPGPPGL 439
Query: 407 GGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPG----VGISPEAQAAAAAKAAKYGLVPG 462
G PG + G+ G G G G+PG G G G + E + +A K GL PG
Sbjct: 440 PGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGDEAIK-GL-PG 497
Query: 463 VGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVA 521
+ PG G+ PG G G+ PG+ PG IG G A + +
Sbjct: 498 L---PGPKGFAGINGEPGRKGDRGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTIT 554
Query: 522 AKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGL----GVG----AGVPGFGAVPGAL 573
K + R G+ G+PG+ G PG G PGL G G G PG+ +PG
Sbjct: 555 TKGE-RGQPGV-PGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTK 612
Query: 574 AA-AKAAKYGAAVPGVLGGLGALGGVGIPG--GVVG-AGPAAA-----------AAAAKA 618
+ G +PG+ G G G G+PG G +G GPA A
Sbjct: 613 GTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVGGD 672
Query: 619 AAKAAQFGLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAK-----YGVAARPGFG 672
+A Q G +G GL GL G G G GL GIP A A G A R GF
Sbjct: 673 RQEAIQPGCIGGPKGLPGL-PGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFP 731
Query: 673 LSPIFPG 679
P F G
Sbjct: 732 GPPGFIG 738
Score = 106 bits (264), Expect = 8e-23
Identities = 154/492 (31%), Positives = 190/492 (38%), Gaps = 101/492 (20%)
Query: 23 PSRPGGVPGA-----IPGGVPGGVFYPG-AGLGALGG--GALGPGGKPLKPVPGGLAGAG 74
P RPG + G +PG +PG +PG AG + G G +G G P GL G
Sbjct: 1026 PGRPGHIKGVKGDIGVPG-IPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGE- 1083
Query: 75 LGAGLGAF----PAVTFPGALVPG--------GVADAAAAY--KAAKAGAGLGGVPGVGG 120
+GA G F + PG PG G+ + K + G G+ GV G
Sbjct: 1084 IGA-TGDFGDIGDTINLPGR--PGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTG 1140
Query: 121 L----GVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPT 176
+ G+ PG P PG+ G++ +GLPG PGA PG LPG P
Sbjct: 1141 VQGPPGLKGQTGFPGLTGP-PGS---QGELGRIGLPGGKGDDGWPGA--PG---LPGFPG 1191
Query: 177 GAGVKPK--APGVGGAFAGIPGVGPFGGPQ-PGVP--LGYPIKAPKLPGGYGLPYTTGK- 230
G++ PG G F G PG G P PG P G P +A LPG G+P G
Sbjct: 1192 LRGIRGLHGLPGTKG-FPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQ 1250
Query: 231 -LPYGYGPGG---------------VAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAK 270
P GP G ++GA G G P G+ GP +AA +K
Sbjct: 1251 GAPGERGPPGSPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSK 1310
Query: 271 FGAGAAGV--LPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLV 328
G G PG G P PG+ G+ G P GA
Sbjct: 1311 GDTGNPGAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMG--NTGPTGAVGDRG 1368
Query: 329 PGGPGFGPGVVGVPGAGVPGVGVPG-AGIP----VVPGA-------GIPGAAVPGVVSPE 376
P GP PG G PG VG PG AGIP V PG G PGA PG + P+
Sbjct: 1369 PKGPKGDPGFPGAPGT----VGAPGIAGIPQKIAVQPGTVGPQGRRGPPGA--PGEMGPQ 1422
Query: 377 AAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG-----VGVGGIPGVAGVPGVGGV 431
+ G R G G G G PGF +G G G G PG G
Sbjct: 1423 GPP------GEPGFRGAPGKAGPQGRG-GVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGS 1475
Query: 432 PGVGGVPGVGIS 443
PG+ G+PG +S
Sbjct: 1476 PGLPGMPGRSVS 1487
Score = 62.4 bits (150), Expect = 1e-09
Identities = 95/308 (30%), Positives = 110/308 (35%), Gaps = 58/308 (18%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLG 80
P PG PG G PG PG L G PG K + PG G GL
Sbjct: 1208 PGSPGSDIHGDPGFPGPPGERGDPGEA-NTLPGPVGVPGQKGDQGAPGERGPPG-SPGLQ 1265
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAVVPQPGA 139
FP +T P + + G D G PG+ GL G P PG+ PG+
Sbjct: 1266 GFPGIT-PPSNISGAPGDK--------------GAPGIFGLKGYRGPPGPPGSAA-LPGS 1309
Query: 140 GVKPGKVPGVGLPGV--YPGGVLPGARFPGVGVLPGV--------------PTGA--GVK 181
G G PG + G P R PGV LPG PTGA
Sbjct: 1310 KGDTGNPGAPGTPGTKGWAGDSGPQGR-PGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRG 1368
Query: 182 PKAPGVGGAFAGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
PK P F G PG VG PG+ G P K PG G G P G G
Sbjct: 1369 PKGPKGDPGFPGAPGTVGA-----PGIA-GIPQKIAVQPGTVGPQGRRGP-PGAPGEMGP 1421
Query: 241 AGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGV--------LPG-VGGAGVPGV 290
G G+ G+ G GPQ +A + G G PG G G+PG+
Sbjct: 1422 QGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGM 1481
Query: 291 PGAIPGIG 298
PG IG
Sbjct: 1482 PGRSVSIG 1489
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 165 bits (418), Expect = 1e-40
Identities = 223/700 (31%), Positives = 254/700 (36%), Gaps = 101/700 (14%)
Query: 26 PGGVPGAI-PGGVPGGVFYPGAG-----LGALGG-GALGPGGKPLKPVPGGLAGAGLGAG 78
P G PG + P G PG PGA GA G GA GP G+P P G AGA G
Sbjct: 352 PAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPG 411
Query: 79 LGAFP-------------AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVS 124
P A FPG P G A G G PG+ G G
Sbjct: 412 TDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPL----GPKGQTGEPGIAGFKGEQ 467
Query: 125 AAPSVPGAVVPQ--PGAGVKPGKVPGVGLP-GVYPGGVLPGAR-FPGVGVLPGVPTGAGV 180
PG PQ PG + GK G P GV P G PG R PG PG AG
Sbjct: 468 GPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGP-PGERGAPGNRGFPGQDGLAGP 526
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL-PYG-YGPG 238
K APG G +G+ G G PG P P LPG GL G P G GP
Sbjct: 527 K-GAPGERGP-SGLAGPKGANG-DPGRP-----GEPGLPGARGLTGRPGDAGPQGKVGPS 578
Query: 239 GVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--AIPG 296
G G G+ G P GPQ A GA G G G+PG PG +PG
Sbjct: 579 GAPGEDGRPGPP-----GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPG 633
Query: 297 IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGVGVPGA 354
G G P A A + + GA PG GF PG G PG G G PG
Sbjct: 634 KDGETGAAGP--PGPAGPAGERGEQGA-----PGPSGFQGLPGPPGPPGEG----GKPG- 681
Query: 355 GIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG 413
G+PG A PG+V P + GA+ G G+P G P
Sbjct: 682 ------DQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP--GTPGTDGPKGA 733
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVG--------ISPEAQAAAAAKAAKYGLVPGVGV 465
G G PG G PG+ G+PG G G+ + + A K GL +G
Sbjct: 734 SGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG- 792
Query: 466 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKA 524
PG A G G PG + G APG G GP G A + + AK
Sbjct: 793 PPGPAGANGEKGEVG---PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKG 849
Query: 525 QLRAAAGLG-AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGA 583
+ A G AG PG G PG GV G G G PGA
Sbjct: 850 EQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTG---PKGARGAQGPPGA----------T 896
Query: 584 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG--VGGL 641
PG G +G G G PG GP+ A + G G GL G G
Sbjct: 897 GFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEK 956
Query: 642 GVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIFPG 679
G PG G G PP A + G+ PG FPG
Sbjct: 957 GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPG 996
Score = 151 bits (381), Expect = 2e-36
Identities = 226/689 (32%), Positives = 255/689 (37%), Gaps = 117/689 (16%)
Query: 26 PGGV-PGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGA-GLGAGLGA 81
PGGV P PG G PG +PG G GP G P + P GLAG G G
Sbjct: 497 PGGVGPIGPPGERGAPGNRGFPGQD------GLAGPKGAPGERGPSGLAGPKGANGDPGR 550
Query: 82 FPAVTFPGAL-VPGGVADAAAAYKAAKAGA-GLGGVPGVGG-LGVSAAPSVPGAVVPQPG 138
PGA + G DA K +GA G G PG G G P V G P+ G
Sbjct: 551 PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPK-G 609
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVP--TGAGVKPKAPGVGGAFA--GI 194
A +PGK GLPG PG+ LPG TGA P G G G
Sbjct: 610 ANGEPGKAGEKGLPGA-----------PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA 658
Query: 195 PGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG 254
PG F G PG P G P + K PG G+P G P GP G G G+ G P G
Sbjct: 659 PGPSGFQG-LPGPP-GPPGEGGK-PGDQGVPGEAGA-PGLVGPRGERGFPGERGSPGAQG 714
Query: 255 V-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGA----GVPGVPGAIPGIGGIAG-VGTPAA 308
+ GP+ K +G AG PG G G+PG GA GI G G G
Sbjct: 715 LQGPRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGA-AGIAGPKGDRGDVGE 772
Query: 309 AAAAAAAAKAAKYGAAAGLVPGGPGFG---------PGVVGVPGA-GVPG----VGVPG- 353
A K G + P GP PG G GA G PG G PG
Sbjct: 773 KGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGP 832
Query: 354 AGIPVVPGA-GIPG-------------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI 399
AG PGA G PG A PG P A G + G G
Sbjct: 833 AGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGP 892
Query: 400 PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
P GA GFPG G G PG G PG G PG G G + +A + GL
Sbjct: 893 P----GATGFPG-AAGRVGPPGSNGNPGPPGPPGPSGKDGPK-GARGDSGPPGRAGEPGL 946
Query: 460 -----VPGVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAA 513
PG PG G PG GLA G+ G+ G PG+ PG
Sbjct: 947 QGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIV-GLPGQRGERGFPGL-PGPSGEP 1004
Query: 514 AKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 573
K A A+ + G PG VG PGL AG PG G PG PG
Sbjct: 1005 GKQGAPGASGDR---------GPPG---PVGPPGLTGPAGEPG---REGSPGADGPPGRD 1049
Query: 574 AAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG- 632
A A V G G GA+G G PG GPA +A G +G +G
Sbjct: 1050 GA-------AGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGP 1102
Query: 633 LGGLGV----------GGLGVPGVGGLGG 651
G G+ G G PG GL G
Sbjct: 1103 AGARGIQGPQGPRGDKGEAGEPGERGLKG 1131
Score = 147 bits (371), Expect = 3e-35
Identities = 231/743 (31%), Positives = 260/743 (34%), Gaps = 133/743 (17%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPA 84
P G PG P G P G P G G GA GP G+ +P G G
Sbjct: 118 PKGPPG--PQG-PAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP----------- 163
Query: 85 VTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPG 144
PG P G + A AG G G LGV P P PG PG
Sbjct: 164 ---PGPPGPPGPPGLGGNFAAQMAG-GFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 219
Query: 145 KVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGP 203
G PG PG PGV P P G P PG G AG PG G G P
Sbjct: 220 PQGFQGNPGE------PGE--PGVSG-PMGPRGPPGPPGKPGDDGE-AGKPGKAGERGPP 269
Query: 204 QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAA 262
P G+P P LPG G G L G G G G++G P G GP
Sbjct: 270 GPQGARGFP-GTPGLPGVKGHRGYPG-LDGAKGEAGAPGVKGESGSPGENGSPGPMGPRG 327
Query: 263 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 322
+ AGAAG G G G PG + GG G P A A G
Sbjct: 328 LPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEG 387
Query: 323 AAAGL----VPGGPG-----FGPGVVGVPG----AGVPGV-GVPG----AGIPVVPGA-- 362
A PG PG PG G+PG AG PG+ G PG G P GA
Sbjct: 388 AQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATG 447
Query: 363 --------GIPGAA----------VPGVVSPEAAAKAAAKAAKYGAR--PGVGVGGIPTY 402
G PG A PG P+ A A + K GAR PG GVG I
Sbjct: 448 PLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPG-GVGPIGPP 506
Query: 403 G----VGAGGFPGFG--------------------VGVGGIPGVAGVPGVGGVPGVGGVP 438
G G GFPG G G PG G PG+ G G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566
Query: 439 GVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLA---PGVGVAPGVGV 495
G P+ + + + G PG G PGV PG A PG G+
Sbjct: 567 G-DAGPQGKVGPSGAPGEDGR-PGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPG 624
Query: 496 APGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG-------AGIPGLGVGVGVPG 547
APG+ PG G G A A + + A G G PG G G G
Sbjct: 625 APGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG 684
Query: 548 LGVGAGVPGLGVG----AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG- 602
+ AG PGL VG G PG PGA + + PG G GA G G PG
Sbjct: 685 VPGEAGAPGL-VGPRGERGFPGERGSPGA-QGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742
Query: 603 -------GVVGAGPAAAAAAAKA-AAKAAQFGLVGAAGL-GGLGV-GGLGVPGVGGLGGI 652
G+ G AA A K + G GA G GG G+ G +G PG G G
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802
Query: 653 -----PPAAAAKAAKYGVAARPG 670
PP A A G G
Sbjct: 803 KGEVGPPGPAGSAGARGAPGERG 825
Score = 143 bits (361), Expect = 5e-34
Identities = 223/713 (31%), Positives = 258/713 (36%), Gaps = 114/713 (15%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPL---KPVPGGLAGAGLGA 77
P G PG PG G+PG G A G +GP G P +P P G GA
Sbjct: 541 PKGANGDPGR-PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQP 599
Query: 78 GLGAFPAVT-------------FPGAL----VPGGVADAAAAYKAAKAG-AGLGGVPGVG 119
G+ FP PGA +PG + AA AG AG G G
Sbjct: 600 GVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAP 659
Query: 120 G-LGVSAAPSVPGAVVPQPGAGVKPGK--VPG-VGLPGV--------YPGGV-LPGAR-F 165
G G P PG PG G KPG VPG G PG+ +PG PGA+
Sbjct: 660 GPSGFQGLPGPPGP----PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGL 715
Query: 166 PGVGVLPGVPTGAGVKPKA-----PGVGG--AFAGIPG-------VGPFGGPQPGVPLGY 211
G LPG P G K + PG G G+PG GP G + V
Sbjct: 716 QGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP-KGDRGDVGEKG 774
Query: 212 PIKAPKLPGGYGLPYTTGKL-PYG-------YGPGGVAGAAGKAGYPTGTG-VGPQAAAA 262
P AP GG GL G P G GP G AG+AG G P G GP A
Sbjct: 775 PEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAG 834
Query: 263 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAAK 317
A A GA G G G G PG PG G GV P A A
Sbjct: 835 FAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPG 894
Query: 318 AAKYGAAAGLV-PGGPGFGPGVVGVPGA----GVPGV----GVPG-AGIPVVPG-AGIPG 366
A + AAG V P G PG G PG G G G PG AG P + G AG PG
Sbjct: 895 ATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPG 954
Query: 367 A-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
PG P A G R G+ G+P G GFPG +PG +G
Sbjct: 955 EKGEPGDDGPSGAEGPPGPQGLAGQR---GIVGLPGQR-GERGFPG-------LPGPSGE 1003
Query: 426 PGVGGVPGVGGVPGVG--ISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGL 483
PG G PG G G + P A + + G +PG PG A GV
Sbjct: 1004 PGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-------SPGADGPPGRDGAAGVKG 1056
Query: 484 APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVG 542
G A G APG +PG P G + A+ + + GA GI G
Sbjct: 1057 DRGETGAVGAPGAPGPPGSPG--PAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1114
Query: 543 VGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGA-AVPGVLGGLGA 594
G G G GL G G +PG A+ A G PG +G G
Sbjct: 1115 RGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGK 1174
Query: 595 LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 647
G GIPG + GP + A G G G G G+ G+G
Sbjct: 1175 DGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLG 1227
Score = 122 bits (306), Expect = 1e-27
Identities = 159/504 (31%), Positives = 180/504 (35%), Gaps = 49/504 (9%)
Query: 215 APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGY------PTGTGVGPQAAAAAAAKAA 268
+P++P G P L G G G G+ G P G GPQ A
Sbjct: 77 SPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKGPP-GPQGPAGEQGPRG 135
Query: 269 AKFGAGAAGVLPGVGGA----GVPGVPG--AIPGIGGIAGVGTPAAAAAAAA---AAKAA 319
+ G G PG G G PG PG PG G G+G AA A A A
Sbjct: 136 DRGDKGEKGA-PGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGA 194
Query: 320 KYGAAAG-LVPGGPGFGPGVVGVPG----AGVPG-VGVPGAGIPVVPGAGIPGAAVPGVV 373
+ G G + P GP PG G PG G PG G PG P+ P G PG PG
Sbjct: 195 QLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGP-RGPPGP--PGKP 251
Query: 374 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG 433
+ A KA + G G G P G G PG G G PG+ G G G PG
Sbjct: 252 GDDGEAGKPGKAGERGPPGPQGARGFP----GTPGLPGV-KGHRGYPGLDGAKGEAGAPG 306
Query: 434 V---GGVPGVGISPEAQAAAAAKAAKYGLVP-GVGVAPGVGVAPGVGVAPG-VGLAPGVG 488
V G PG SP + P G A G PG PG VG A G G
Sbjct: 307 VKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPG 366
Query: 489 VAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPG 547
G G GP G + A+ G GIPG G PG
Sbjct: 367 FPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG 426
Query: 548 LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVV 605
+ AG PG G PG G L K PG+ G G G G PG G
Sbjct: 427 I---AGAPGFPGPRGPPGPQGATGPL----GPKGQTGEPGIAGFKGEQGPKGEPGPAGPQ 479
Query: 606 GA-GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYG 664
GA GPA A + G +G G G G G PG GL G P A + G
Sbjct: 480 GAPGPAGEEGKRGARGEPGGVGPIGPPGERG-APGNRGFPGQDGLAG-PKGAPGERGPSG 537
Query: 665 VAARPGFGLSPIFPGGACLGKACG 688
+A G P PG L A G
Sbjct: 538 LAGPKGANGDPGRPGEPGLPGARG 561
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 165 bits (418), Expect = 1e-40
Identities = 223/700 (31%), Positives = 254/700 (36%), Gaps = 101/700 (14%)
Query: 26 PGGVPGAI-PGGVPGGVFYPGAG-----LGALGG-GALGPGGKPLKPVPGGLAGAGLGAG 78
P G PG + P G PG PGA GA G GA GP G+P P G AGA G
Sbjct: 283 PAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPG 342
Query: 79 LGAFP-------------AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVS 124
P A FPG P G A G G PG+ G G
Sbjct: 343 TDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPL----GPKGQTGEPGIAGFKGEQ 398
Query: 125 AAPSVPGAVVPQ--PGAGVKPGKVPGVGLP-GVYPGGVLPGAR-FPGVGVLPGVPTGAGV 180
PG PQ PG + GK G P GV P G PG R PG PG AG
Sbjct: 399 GPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGP-PGERGAPGNRGFPGQDGLAGP 457
Query: 181 KPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKL-PYG-YGPG 238
K APG G +G+ G G PG P P LPG GL G P G GP
Sbjct: 458 K-GAPGERGP-SGLAGPKGANG-DPGRP-----GEPGLPGARGLTGRPGDAGPQGKVGPS 509
Query: 239 GVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--AIPG 296
G G G+ G P GPQ A GA G G G+PG PG +PG
Sbjct: 510 GAPGEDGRPGPP-----GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPG 564
Query: 297 IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGVGVPGA 354
G G P A A + + GA PG GF PG G PG G G PG
Sbjct: 565 KDGETGAAGP--PGPAGPAGERGEQGA-----PGPSGFQGLPGPPGPPGEG----GKPG- 612
Query: 355 GIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG 413
G+PG A PG+V P + GA+ G G+P G P
Sbjct: 613 ------DQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP--GTPGTDGPKGA 664
Query: 414 VGVGGIPGVAGVPGVGGVPGVGGVPGVG--------ISPEAQAAAAAKAAKYGLVPGVGV 465
G G PG G PG+ G+PG G G+ + + A K GL +G
Sbjct: 665 SGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG- 723
Query: 466 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKA 524
PG A G G PG + G APG G GP G A + + AK
Sbjct: 724 PPGPAGANGEKGEVG---PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKG 780
Query: 525 QLRAAAGLG-AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGA 583
+ A G AG PG G PG GV G G G PGA
Sbjct: 781 EQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTG---PKGARGAQGPPGA----------T 827
Query: 584 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG--VGGL 641
PG G +G G G PG GP+ A + G G GL G G
Sbjct: 828 GFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEK 887
Query: 642 GVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIFPG 679
G PG G G PP A + G+ PG FPG
Sbjct: 888 GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPG 927
Score = 151 bits (381), Expect = 2e-36
Identities = 226/689 (32%), Positives = 255/689 (37%), Gaps = 117/689 (16%)
Query: 26 PGGV-PGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGA-GLGAGLGA 81
PGGV P PG G PG +PG G GP G P + P GLAG G G
Sbjct: 428 PGGVGPIGPPGERGAPGNRGFPGQD------GLAGPKGAPGERGPSGLAGPKGANGDPGR 481
Query: 82 FPAVTFPGAL-VPGGVADAAAAYKAAKAGA-GLGGVPGVGG-LGVSAAPSVPGAVVPQPG 138
PGA + G DA K +GA G G PG G G P V G P+ G
Sbjct: 482 PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPK-G 540
Query: 139 AGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVP--TGAGVKPKAPGVGGAFA--GI 194
A +PGK GLPG PG+ LPG TGA P G G G
Sbjct: 541 ANGEPGKAGEKGLPGA-----------PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA 589
Query: 195 PGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG 254
PG F G PG P G P + K PG G+P G P GP G G G+ G P G
Sbjct: 590 PGPSGFQG-LPGPP-GPPGEGGK-PGDQGVPGEAGA-PGLVGPRGERGFPGERGSPGAQG 645
Query: 255 V-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGA----GVPGVPGAIPGIGGIAG-VGTPAA 308
+ GP+ K +G AG PG G G+PG GA GI G G G
Sbjct: 646 LQGPRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGA-AGIAGPKGDRGDVGE 703
Query: 309 AAAAAAAAKAAKYGAAAGLVPGGPGFG---------PGVVGVPGA-GVPG----VGVPG- 353
A K G + P GP PG G GA G PG G PG
Sbjct: 704 KGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGP 763
Query: 354 AGIPVVPGA-GIPG-------------AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI 399
AG PGA G PG A PG P A G + G G
Sbjct: 764 AGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGP 823
Query: 400 PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
P GA GFPG G G PG G PG G PG G G + +A + GL
Sbjct: 824 P----GATGFPG-AAGRVGPPGSNGNPGPPGPPGPSGKDGPK-GARGDSGPPGRAGEPGL 877
Query: 460 -----VPGVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAA 513
PG PG G PG GLA G+ G+ G PG+ PG
Sbjct: 878 QGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIV-GLPGQRGERGFPGL-PGPSGEP 935
Query: 514 AKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 573
K A A+ + G PG VG PGL AG PG G PG PG
Sbjct: 936 GKQGAPGASGDR---------GPPG---PVGPPGLTGPAGEPG---REGSPGADGPPGRD 980
Query: 574 AAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG- 632
A A V G G GA+G G PG GPA +A G +G +G
Sbjct: 981 GA-------AGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGP 1033
Query: 633 LGGLGV----------GGLGVPGVGGLGG 651
G G+ G G PG GL G
Sbjct: 1034 AGARGIQGPQGPRGDKGEAGEPGERGLKG 1062
Score = 147 bits (371), Expect = 3e-35
Identities = 231/743 (31%), Positives = 260/743 (34%), Gaps = 133/743 (17%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPA 84
P G PG P G P G P G G GA GP G+ +P G G
Sbjct: 49 PKGPPG--PQG-PAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP----------- 94
Query: 85 VTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPG 144
PG P G + A AG G G LGV P P PG PG
Sbjct: 95 ---PGPPGPPGPPGLGGNFAAQMAG-GFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 150
Query: 145 KVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGP 203
G PG PG PGV P P G P PG G AG PG G G P
Sbjct: 151 PQGFQGNPGE------PGE--PGVSG-PMGPRGPPGPPGKPGDDGE-AGKPGKAGERGPP 200
Query: 204 QPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAA 262
P G+P P LPG G G L G G G G++G P G GP
Sbjct: 201 GPQGARGFP-GTPGLPGVKGHRGYPG-LDGAKGEAGAPGVKGESGSPGENGSPGPMGPRG 258
Query: 263 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYG 322
+ AGAAG G G G PG + GG G P A A G
Sbjct: 259 LPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEG 318
Query: 323 AAAGL----VPGGPG-----FGPGVVGVPG----AGVPGV-GVPG----AGIPVVPGA-- 362
A PG PG PG G+PG AG PG+ G PG G P GA
Sbjct: 319 AQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATG 378
Query: 363 --------GIPGAA----------VPGVVSPEAAAKAAAKAAKYGAR--PGVGVGGIPTY 402
G PG A PG P+ A A + K GAR PG GVG I
Sbjct: 379 PLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPG-GVGPIGPP 437
Query: 403 G----VGAGGFPGFG--------------------VGVGGIPGVAGVPGVGGVPGVGGVP 438
G G GFPG G G PG G PG+ G G+ G P
Sbjct: 438 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497
Query: 439 GVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLA---PGVGVAPGVGV 495
G P+ + + + G PG G PGV PG A PG G+
Sbjct: 498 G-DAGPQGKVGPSGAPGEDGR-PGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPG 555
Query: 496 APGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLG-------AGIPGLGVGVGVPG 547
APG+ PG G G A A + + A G G PG G G G
Sbjct: 556 APGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG 615
Query: 548 LGVGAGVPGLGVG----AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG- 602
+ AG PGL VG G PG PGA + + PG G GA G G PG
Sbjct: 616 VPGEAGAPGL-VGPRGERGFPGERGSPGA-QGLQGPRGLPGTPGTDGPKGASGPAGPPGA 673
Query: 603 -------GVVGAGPAAAAAAAKA-AAKAAQFGLVGAAGL-GGLGV-GGLGVPGVGGLGGI 652
G+ G AA A K + G GA G GG G+ G +G PG G G
Sbjct: 674 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 733
Query: 653 -----PPAAAAKAAKYGVAARPG 670
PP A A G G
Sbjct: 734 KGEVGPPGPAGSAGARGAPGERG 756
Score = 143 bits (361), Expect = 5e-34
Identities = 223/713 (31%), Positives = 258/713 (36%), Gaps = 114/713 (15%)
Query: 23 PSRPGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPL---KPVPGGLAGAGLGA 77
P G PG PG G+PG G A G +GP G P +P P G GA
Sbjct: 472 PKGANGDPGR-PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQP 530
Query: 78 GLGAFPAVT-------------FPGAL----VPGGVADAAAAYKAAKAG-AGLGGVPGVG 119
G+ FP PGA +PG + AA AG AG G G
Sbjct: 531 GVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAP 590
Query: 120 G-LGVSAAPSVPGAVVPQPGAGVKPGK--VPG-VGLPGV--------YPGGV-LPGAR-F 165
G G P PG PG G KPG VPG G PG+ +PG PGA+
Sbjct: 591 GPSGFQGLPGPPGP----PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGL 646
Query: 166 PGVGVLPGVPTGAGVKPKA-----PGVGG--AFAGIPG-------VGPFGGPQPGVPLGY 211
G LPG P G K + PG G G+PG GP G + V
Sbjct: 647 QGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP-KGDRGDVGEKG 705
Query: 212 PIKAPKLPGGYGLPYTTGKL-PYG-------YGPGGVAGAAGKAGYPTGTG-VGPQAAAA 262
P AP GG GL G P G GP G AG+AG G P G GP A
Sbjct: 706 PEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAG 765
Query: 263 AAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGVGTPAAAAAAAAAAK 317
A A GA G G G G PG PG G GV P A A
Sbjct: 766 FAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPG 825
Query: 318 AAKYGAAAGLV-PGGPGFGPGVVGVPGA----GVPGV----GVPG-AGIPVVPG-AGIPG 366
A + AAG V P G PG G PG G G G PG AG P + G AG PG
Sbjct: 826 ATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPG 885
Query: 367 A-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
PG P A G R G+ G+P G GFPG +PG +G
Sbjct: 886 EKGEPGDDGPSGAEGPPGPQGLAGQR---GIVGLPGQR-GERGFPG-------LPGPSGE 934
Query: 426 PGVGGVPGVGGVPGVG--ISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGL 483
PG G PG G G + P A + + G +PG PG A GV
Sbjct: 935 PGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-------SPGADGPPGRDGAAGVKG 987
Query: 484 APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVG 542
G A G APG +PG P G + A+ + + GA GI G
Sbjct: 988 DRGETGAVGAPGAPGPPGSPG--PAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1045
Query: 543 VGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGA-AVPGVLGGLGA 594
G G G GL G G +PG A+ A G PG +G G
Sbjct: 1046 RGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGK 1105
Query: 595 LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVG 647
G GIPG + GP + A G G G G G+ G+G
Sbjct: 1106 DGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLG 1158
Score = 120 bits (302), Expect = 3e-27
Identities = 152/476 (31%), Positives = 170/476 (35%), Gaps = 47/476 (9%)
Query: 237 PGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA----GVPGVPG 292
PG + G G P GPQ A + G G PG G G PG PG
Sbjct: 40 PGDIKDIVGPKGPP-----GPQGPAGEQGPRGDRGDKGEKGA-PGPRGRDGEPGTPGNPG 93
Query: 293 --AIPGIGGIAGVGTPAAAAAAAA---AAKAAKYGAAAG-LVPGGPGFGPGVVGVPG--- 343
PG G G+G AA A A A+ G G + P GP PG G PG
Sbjct: 94 PPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 153
Query: 344 -AGVPG-VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
G PG G PG P+ P G PG PG + A KA + G G G P
Sbjct: 154 FQGNPGEPGEPGVSGPMGP-RGPPGP--PGKPGDDGEAGKPGKAGERGPPGPQGARGFP- 209
Query: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGV---GGVPGVGISPEAQAAAAAKAAKYG 458
G G PG G G PG+ G G G PGV G PG SP +
Sbjct: 210 ---GTPGLPGV-KGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGR 265
Query: 459 LVP-GVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKS 516
P G A G PG PG VG A G G G G GP G
Sbjct: 266 TGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGE 325
Query: 517 AAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA 575
+ A+ G GIPG G PG+ AG PG G PG G L
Sbjct: 326 PGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI---AGAPGFPGPRGPPGPQGATGPL-- 380
Query: 576 AKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA-GPAAAAAAAKAAAKAAQFGLVGAAG 632
K PG+ G G G G PG G GA GPA A + G +G G
Sbjct: 381 --GPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPG 438
Query: 633 LGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACG 688
G G G PG GL G P A + G+A G P PG L A G
Sbjct: 439 ERG-APGNRGFPGQDGLAG-PKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARG 492
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 162 bits (410), Expect = 1e-39
Identities = 237/726 (32%), Positives = 276/726 (38%), Gaps = 131/726 (18%)
Query: 23 PSRPGGVPGAIPGGVPG--GVF---YPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGL 75
P+ P G PG P G PG G F Y G G+G G G +GP G P G AGA
Sbjct: 58 PTGPPGPPG--PPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPP------GAAGAPG 109
Query: 76 GAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAG-AGLGGVPGVGGLGVSAAPSVPGAVV 134
G PA PG PG A A A G AG G PG G P G V
Sbjct: 110 PQGFQG-PAGE-PGE--PGQTGPAGARGPAGPPGKAGEDGHPGKPG-----RPGERGVVG 160
Query: 135 PQPGAGVKPGKVPGV-GLPGVYPGGVLPGAR----FPGVGVLPGVP--------TGAGVK 181
PQ GA PG PG+ G G+ L G + PGV PG P TGA
Sbjct: 161 PQ-GARGFPG-TPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGL 218
Query: 182 P------KAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPY-- 233
P APG GA VGP G P G PI + PG G P G++
Sbjct: 219 PGERGRVGAPGPAGARGSDGSVGPVG------PAG-PIGSAGPPGFPGAPGPKGEIGAVG 271
Query: 234 GYGPGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVP 291
GP G AG G+ G P +G VGP A AK GAAG LPGV GA G+PG P
Sbjct: 272 NAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAK---GAAG-LPGVAGAPGLPG-P 326
Query: 292 GAIPGIGGIAG-------VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPG-----FGP--- 336
IPG G AG VG P A + + + G+A P GP GP
Sbjct: 327 RGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGE 386
Query: 337 -GVVGVPG----AGVPGV-GVPG----AGIPVVPG----------------AGIPGAAVP 370
G G PG G PG G+PG AG+ PG AG PG P
Sbjct: 387 AGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGE--P 444
Query: 371 GVVSPEAAAKAAAKAAKYGARPGVGVGGI-----PTYGVGAGGFPGFGVGVGGIPGVAGV 425
G++ P + G VG+ GI P GA G PG +G G G G
Sbjct: 445 GLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPG-NIGFPGPKGPTGD 503
Query: 426 PGVGGVPGVGGVPGV--GISPEAQAAAAAKAAKYGLVPGVGV-----APGVGVAPG-VGV 477
PG G G G+ G P+ A G+ G G PG PG G
Sbjct: 504 PGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGP 563
Query: 478 APGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-AGI 536
A VG G+ G+ G GP G + AA + ++ G G
Sbjct: 564 AGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGE 623
Query: 537 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 596
PG+ VG G +G+PG AG+PG K K + G +G G G
Sbjct: 624 PGVVGAVGTAGPSGPSGLPGERGAAGIPG----------GKGEKGEPGLRGEIGNPGRDG 673
Query: 597 GVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAA 656
G PG V GPA A A A G G G G G +G G G G AA
Sbjct: 674 ARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPG-ERGEVGPAGPNGFAGPAGAA 732
Query: 657 AAKAAK 662
AK
Sbjct: 733 GQPGAK 738
Score = 157 bits (398), Expect = 2e-38
Identities = 227/705 (32%), Positives = 264/705 (37%), Gaps = 92/705 (13%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
P G PG G PG PGA A G +GP G P G+ G AG P +
Sbjct: 392 PPGPPGL--RGSPGSRGLPGADGRA---GVMGPPGSRGASGPAGVRGPNGDAGRPGEPGL 446
Query: 86 TFPGALVPGGVADAAAAYKAAKAGA-GLGGVPG-VGGLGVSAAPSVPGAVVPQPGAGVKP 143
P L PG + A K G G+ G PG +G G P G P+ G P
Sbjct: 447 MGPRGL-PGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTG-DP 504
Query: 144 GKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAGVKPKAPGVGGAFA--GIPGVGPF 200
GK G G L GAR PG P GA P GV G G PG F
Sbjct: 505 GKNGDKGHAG------LAGARGAPG----PDGNNGAQGPPGPQGVQGGKGEQGPPGPPGF 554
Query: 201 GG-PQPGVPLGYPIKAPK--LPGGYGLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTG-- 254
G P P P G K + L G +GLP G P G GP G +GAAG G P G+
Sbjct: 555 QGLPGPSGPAGEVGKPGERGLHGEFGLPGPAG--PRGERGPPGESGAAGPTG-PIGSRGP 611
Query: 255 ---------------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGI 297
VG A + + GAAG+ G G G PG+ G I PG
Sbjct: 612 SGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGR 671
Query: 298 GGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGI 356
G G G A A A + GAA P GP PG G G P AG
Sbjct: 672 DGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGA 731
Query: 357 PVVPGA-GIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGV----GVGGIPTYGVGAG 407
PGA G GA P GVV P AA A G PG G GG P G
Sbjct: 732 AGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGP-PGPAGSRGDGGPP----GMT 786
Query: 408 GFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLV--PGVGV 465
GFPG G G PG +G+ G G PG G G+ P + + G V PG
Sbjct: 787 GFPG-AAGRTGPPGPSGISGPPGPPGPAGKEGLR-GPRGDQGPVGRTGEVGAVGPPGFAG 844
Query: 466 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG-------VGVAPGIG-PGGVAAAAKSA 517
G G PG G+ APG+ PG GVA +G PG + A
Sbjct: 845 EKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPG 904
Query: 518 AKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAK 577
A+ A + G+ G PG G PG G PG G G PG +
Sbjct: 905 ARGPPGAV--GSPGVN-GAPGEAGRDGNPG---NDGPPGRDGQPGHKGERGYPGNIGPVG 958
Query: 578 AAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG-LGGL 636
A A PG G +G G G G +GP A A + G+ G G G
Sbjct: 959 A----AGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEK 1014
Query: 637 GVGGL-GVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGG 680
G GL G+ G GL G+P A +G PG + P P G
Sbjct: 1015 GPRGLPGLKGHNGLQGLP----GIAGHHGDQGAPG-SVGPAGPRG 1054
Score = 154 bits (389), Expect = 3e-37
Identities = 229/734 (31%), Positives = 256/734 (34%), Gaps = 100/734 (13%)
Query: 3 GLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGK 61
GL A R GV+ G PG+ P GV P G G G +GP G
Sbjct: 406 GLPGADGRAGVM-------------GPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGL 452
Query: 62 PLKPVPGGLAGAGLGAGLGAF--------PA--------VTFPGALVPGGVADAAAAYKA 105
P P G AG GL PA + FPG P G D
Sbjct: 453 PGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTG--DPGKNGDK 510
Query: 106 AKAG-AGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVY-PGGVL--P 161
AG AG G PG G + P P V G PG GLPG P G + P
Sbjct: 511 GHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKP 570
Query: 162 GAR-FPGVGVLPGV--PTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-----I 213
G R G LPG P G P G G I GP G P P G P +
Sbjct: 571 GERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAV 630
Query: 214 KAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAK 270
G GLP G +P G G G G G+ G P G G A A A A
Sbjct: 631 GTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGAT 690
Query: 271 FGAGAAGVLPGVGGAGVPGVPGAIPGIG--GIAGVGTPAAAAAAAAA-----AKAAK--- 320
G AG G AG G PG +G G G PA AA A AK K
Sbjct: 691 GDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGEN 750
Query: 321 -----YGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIPGAAVPGVV 373
G P GP PG G G G P PG G P G G PG + G+
Sbjct: 751 GVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGP----PGMTGFPGAAGRTGPPGPS--GIS 804
Query: 374 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--------VGVGGIPGVAGV 425
P A K G R G G T VGA G PGF G G PG G
Sbjct: 805 GPPGPPGPAGKEGLRGPRGDQGPVG-RTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGP 863
Query: 426 PGVGGVPGVGGVPGV----GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGV 481
G+ G PG+ G+PG G+ A A PG PG +PGV APG
Sbjct: 864 QGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGE 923
Query: 482 GLA---PGVGVAPGVGVAPGV----GVAPGIGPGGVAAAAKSAAKV--AAKAQLRAAAGL 532
PG PG PG G IGP G A A V A K R G
Sbjct: 924 AGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETG- 982
Query: 533 GAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL 592
+G G VG G +G G+ G PG P L K +PG+ G
Sbjct: 983 PSGPVGPAGAVGPRG---PSGPQGIRGDKGEPGEKG-PRGLPGLKGHNGLQGLPGIAGHH 1038
Query: 593 GALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLG 650
G G G G GPA + A + G VG AG+ G G G PG G
Sbjct: 1039 GDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPP 1098
Query: 651 GIPPAAAAKAAKYG 664
G PP + +G
Sbjct: 1099 G-PPGVSGGGYDFG 1111
Score = 148 bits (373), Expect = 2e-35
Identities = 203/659 (30%), Positives = 240/659 (36%), Gaps = 111/659 (16%)
Query: 54 GALGPGGKPLKPVPGGLAGA------GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAK 107
G GP G P P P GL G G G GLG P G + P G AA
Sbjct: 57 GPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPM----GLMGPRGPPGAA------- 105
Query: 108 AGAGLGGVPGVGGL-GVSAAPSVPGAVVPQPGAGVK--PGKVPGVGLPGVYPGGVLPGAR 164
G PG G G + P PG P G PGK G PG PG PG R
Sbjct: 106 ------GAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGK-PGR--PGER 156
Query: 165 FPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGG--PQPGVPLGYPIKA-PKLPGG 221
GV+ P GA P PG+ G F GI G G QPG P +K P PG
Sbjct: 157 ----GVVG--PQGARGFPGTPGLPG-FKGIRGHNGLDGLKGQPGAP---GVKGEPGAPGE 206
Query: 222 YGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPG 281
G P TG G+ G G+ G P GP A + G G
Sbjct: 207 NGTPGQTGAR-------GLPGERGRVGAP-----GPAGARGSDGSV------GPVGPAGP 248
Query: 282 VGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 341
+G AG PG PGA G I VG A A + G + P GP PG G+
Sbjct: 249 IGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSG---PVGPPGNPGANGL 305
Query: 342 PG----AGVPGVGVPGAGIPVVPG-AGIPG-------AAVPGVVSPEAAAKAAAKAAKYG 389
G AG+PGV AG P +PG GIPG G+V A + ++ G
Sbjct: 306 TGAKGAAGLPGV----AGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKG 361
Query: 390 ARPGVGVGGIPTYG-----VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G G P G G G G G PG+ G PG G+PG G GV P
Sbjct: 362 EPGSAGPQGPPGPSGEEGKRGPNGEAG-SAGPPGPPGLRGSPGSRGLPGADGRAGVMGPP 420
Query: 445 EAQAAA-----------AAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG- 492
++ A+ A + + GL+ G+ G G VGL PG+ PG
Sbjct: 421 GSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGL-PGIDGRPGP 479
Query: 493 VGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVG 551
+G A G IG G K K A GA G G G PG
Sbjct: 480 IGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGV 539
Query: 552 AGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGA-------AVPGVLGGLGALGGVGIPGG 603
G G G PGF +PG A + K G +PG G G G G G
Sbjct: 540 QGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGA 599
Query: 604 VVGAGPAAAAAAAKAA---AKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAK 659
GP + + + G+VGA G G G G+PG G GIP K
Sbjct: 600 AGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPS-GPSGLPGERGAAGIPGGKGEK 657
Score = 79.0 bits (193), Expect = 1e-14
Identities = 90/289 (31%), Positives = 106/289 (36%), Gaps = 26/289 (8%)
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
G G G G PG G G G PG P AA+Y GVG+ PG G
Sbjct: 39 GPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYD-GKGVGLGPGPMGLMG 97
Query: 475 VGVAPGVGLAPGVGVAPGVGVAPG----VGVAPGIGPGGVAAAAKS---AAKVAAKAQLR 527
PG APG G PG G A GP G A K +
Sbjct: 98 PRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERG 157
Query: 528 AAAGLGA----GIPGLG--VGV----GVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA-- 575
GA G PGL G+ G+ GL G PG+ G PG PG A
Sbjct: 158 VVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARG 217
Query: 576 --AKAAKYGAAVP-GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 632
+ + GA P G G G++G VG G + AGP A + G G AG
Sbjct: 218 LPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAG 277
Query: 633 LGGLGVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 679
G G +G+PG+ G G P P A G A PG +P PG
Sbjct: 278 PAG-PRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPG 325
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 155 bits (391), Expect = 2e-37
Identities = 235/761 (30%), Positives = 271/761 (35%), Gaps = 152/761 (19%)
Query: 28 GVPGAI-PGGVPGGVFYPG-AGLGALGG--GALGPGGK--------PLKPVPG-GLAGA- 73
G PG + P G+PG +PG G+ G GA GP G P PV GL GA
Sbjct: 363 GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAI 422
Query: 74 GLGAGLGAFPAVTFPGALVPGGVADAAAA-----YKAAKAGAGLGGVPGVGGLGVSAAPS 128
G GA PG P G A + + G G PGV G A P
Sbjct: 423 GTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPK 482
Query: 129 -------VPGAVVPQPGAGVK-PGKVPG-VGLPGVYPGGVLPGAR-FPGVGVLPGVPTGA 178
+ G + P G + P PG VG PG PG R FPG LPG P GA
Sbjct: 483 GEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPG-PKGA 541
Query: 179 ----------GVK--------PKAPGVGGA--FAGIPGV-------GPFGGP----QPGV 207
G K P PG+ GA G PGV GP G P +PG
Sbjct: 542 QGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGP 601
Query: 208 PLGYPIKAPKLPGGYGLPYTTGKL--PYGYGPGGVAGAAGKAGYPTGTG-VGPQAAAAAA 264
P I+ PG GLP G P G G AG G+ G P G VGP
Sbjct: 602 PGSIGIRGQ--PGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPP 659
Query: 265 AKAAAKFGAGAAGVL-----------PGVGGA----GVPGVPGAIPGIGGIAGVGTPAAA 309
A + G G PG GG GVPG PGA+ +G G P
Sbjct: 660 GLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGER 719
Query: 310 AAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG-AGIPVVPG----- 361
+ G A G P GP PG G PG G PG+ G+PG GI PG
Sbjct: 720 GEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDR 779
Query: 362 -----------AGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI---------- 399
AG GA +PG + P A + + G R VG G
Sbjct: 780 GGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGEN 839
Query: 400 -PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYG 458
PT GA GF G G G PGV G PG G G G PG P+ A + G
Sbjct: 840 GPT---GAVGFAG-PQGPDGQPGVKGEPGEPGQKGDAGSPG----PQGLAGSPGPHGPNG 891
Query: 459 LVPGVGVAPGVGVAPGVGVAPG-VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSA 517
VPG+ G PG PG G G A G A +G GP G+ S
Sbjct: 892 -VPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSH 950
Query: 518 AKVAAKAQLRAAAGLG-------------------AGIPGLGVGVGVPGLGVGAGVPGLG 558
+V + G G AG G VG+PG G+PGL
Sbjct: 951 GRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLP 1010
Query: 559 VGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKA 618
AG PG GA PG +G G+ G VG PG AG A
Sbjct: 1011 GPAGTPGKVGPTGATG-------DKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGA 1063
Query: 619 AAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAK 659
+ G G AGL G G PG G G P A +
Sbjct: 1064 VGERGDRGDPGPAGL----PGSQGAPGTPGPVGAPGDAGQR 1100
Score = 138 bits (347), Expect = 2e-32
Identities = 227/744 (30%), Positives = 260/744 (34%), Gaps = 144/744 (19%)
Query: 26 PGGVPGAI--PG-----GVPGGVFYPGA-GL----GALG-------GGALGPGGKPLKPV 66
P G PG + PG G PG +PG+ GL GA G G G G P +P
Sbjct: 505 PRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPG 564
Query: 67 PGGLAGAGLGAGLGAFPAVTFP-GALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL---- 121
GL GA GL P V P G L P G A G+ G PG GL
Sbjct: 565 EPGLPGA---RGLTGNPGVQGPEGKLGPLG-APGEDGRPGPPGSIGIRGQPGSMGLPGPK 620
Query: 122 GVSAAPSVPGAV--VPQPGAGVKPGKVPGVGLPGVYPGGVLPGAR----------FPGVG 169
G S P PG PG PGK VG G L G R F G+
Sbjct: 621 GSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLP 680
Query: 170 VLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTT 228
PG P G G KP GV G PG VGP G P G P + + PG GLP
Sbjct: 681 GPPG-PPGEGGKPGDQGVPGD----PGAVGPLG---PRGERGNPGERGE-PGITGLPGEK 731
Query: 229 GKLPYGYGPGGVAGAAGKAGYPTGTGV-------GPQAAAAAAAKAAAKFGAGAAGVLPG 281
G + G+GP G G+ G +G P TG G + A + G G G
Sbjct: 732 G-MAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790
Query: 282 VGGAGVPGVPGAI--PGIGGIAG----------VGTPAAAAAAAAAAKAAKYGAAAGLVP 329
G G G+PG + PG G G VG P + + + GA P
Sbjct: 791 AGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGP 850
Query: 330 GGPGFGPGVVGVPG----------------AGVPGV----GVPGA----GIPVVPGA-GI 364
GP PGV G PG AG PG GVPG G PGA G
Sbjct: 851 QGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGF 910
Query: 365 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVG--GIPGV 422
PG+A G V P A A A G G G P G G PG VG G G
Sbjct: 911 PGSA--GRVGPPGPAGAPGPAGPLGEP---GKEGPP----GLRGDPGSHGRVGDRGPAGP 961
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLV--PGVGVAPGVGVAPGVGVAPG 480
G PG G PG G PG P+ A + G+V PG G+ PG PG
Sbjct: 962 PGGPGDKGDPGEDGQPG----PDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPG 1017
Query: 481 ----VGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLR-----AAAG 531
G G VG G GP G A + + A + AG
Sbjct: 1018 KVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAG 1077
Query: 532 L--GAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGA---VPGALAA-AKAAKYG--- 582
L G PG VG PG G PG G PG +PG +G
Sbjct: 1078 LPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRG 1137
Query: 583 -------------AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVG 629
+PG G G G GIPG GP + G +G
Sbjct: 1138 DRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIG 1197
Query: 630 AAGLGGLGVGGLGVPGVGGLGGIP 653
G+ G VG G G G G P
Sbjct: 1198 PPGVRG-SVGEAGPEGPPGEPGPP 1220
Score = 127 bits (318), Expect = 5e-29
Identities = 215/711 (30%), Positives = 247/711 (34%), Gaps = 120/711 (16%)
Query: 44 PGAGLGALGGGALGPGGKP-LKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAA 102
PG G G G G G+P L PV G+ G AG PG+ P G
Sbjct: 100 PGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGP--------PGSQGPRGERGPKGR 151
Query: 103 YKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV-PQPGAGVKPGKVPGVGLP--------- 152
+ G+ G PGV G AP PG P P +P GL
Sbjct: 152 -PGPRGPQGIDGEPGVPGQ--PGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQV 208
Query: 153 GVYPGGVLP-GARFPGVGVLPGVPTGAGVK--PKAPGVGGAFAGIPGVGPFGGP------ 203
G+ PG V P G R P L G GAG P PG G I GP G P
Sbjct: 209 GLMPGSVGPVGPRGPQG--LQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGED 266
Query: 204 -QPG-------VPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG- 254
+PG V A PG GLP G G G+ G G+ G P G
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHR----GHKGLEGPKGEVGAPGSKGE 322
Query: 255 VGPQAAAAAAAKAAAKFGAGAAGVL-----PGVGGA-GVPGVPG-----AIPGIGGIAG- 302
GP A + G G L PG GA G+PG PG IPG G G
Sbjct: 323 AGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGN 382
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVV------GVPGA----GVPGV-GV 351
G A A G P GP PG+ G PGA G PG G
Sbjct: 383 PGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGP 442
Query: 352 PG-AGIPVVPG-------AGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--- 399
PG AG P PG GI G PGV + A + +G + +G G
Sbjct: 443 PGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGK 502
Query: 400 --PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPG----VGIS-PEAQAAAAA 452
P G G PG VG G PG G PG G+PG G G VG S P+
Sbjct: 503 RGPRGDPGTVGPPG-PVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPG 561
Query: 453 KAAKYGLVPGVGVAPGVGVAPGVGV-----APGVGLAPGVGVAPGVGVAPGVGVAPG-IG 506
+ + GL G+ GV G APG PG + G+ PG PG G
Sbjct: 562 RPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKG 621
Query: 507 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGF 566
G A Q R A G G G VG PGL AG G G GF
Sbjct: 622 SSGDPGKPGEAGNAGVPGQ-RGAPGKD-GEVGPSGPVGPPGL---AGERGEQGPPGPTGF 676
Query: 567 GAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 626
+PG PG G G G G+PG GP + + G
Sbjct: 677 QGLPGP-------------PGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPG 723
Query: 627 LVGAAG----LGGLGVGG-LGVPGVGGLGGI--PPAAAAKAAKYGVAARPG 670
+ G G GG G G G PG G G PP + G+A PG
Sbjct: 724 ITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPG 774
Score = 125 bits (315), Expect = 1e-28
Identities = 202/635 (31%), Positives = 231/635 (36%), Gaps = 66/635 (10%)
Query: 23 PSRPG-----GVPG--AIPG-----GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGL 70
P +PG GVPG PG G G V PG G GP G P P G
Sbjct: 626 PGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGP 685
Query: 71 AGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVP 130
G G G P PGA+ P G + G+ G+PG G+ P P
Sbjct: 686 PGEGGKPGDQGVPGD--PGAVGPLGPR-GERGNPGERGEPGITGLPGEKGMAGGHGPDGP 742
Query: 131 GAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTG--AGVKPK-APGV 187
PG PG GL G +PG R G+ PG P G G+ K A G
Sbjct: 743 KG---SPGPSGTPGDTGPPGLQG------MPGER--GIAGTPG-PKGDRGGIGEKGAEGT 790
Query: 188 GG--AFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG 245
G G+PG P G P P P G + P G G P + G P G G GA G
Sbjct: 791 AGNDGARGLPG--PLGPPGPAGPTGEKGE-PGPRGLVGPPGSRGN-PGSRGENGPTGAVG 846
Query: 246 KAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGV-G 304
AG P G G + K AG+ G G+ G+ P P +PG+ G G G
Sbjct: 847 FAG-PQGPD-GQPGVKGEPGEPGQKGDAGSPGP-QGLAGSPGPHGPNGVPGLKGGRGTQG 903
Query: 305 TPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPG----VGVPG-AGIPV 358
P A +A + G A P GP PG G PG G PG VG G AG P
Sbjct: 904 PPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPG 963
Query: 359 VPG-AGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGV 416
PG G PG PG P A + G G G+P G G PG VG
Sbjct: 964 GPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLP-GPAGTPG-KVGP 1021
Query: 417 GGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVA--PGVGVAPG 474
G G G PG G PG G G PE A + G V G PG PG
Sbjct: 1022 TGATGDKGPPGPVGPPGSNGPVGEP-GPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPG 1080
Query: 475 VGVAPGVGLAPGVGVAPG-VGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG 533
APG PG APG G G IGP G A + G
Sbjct: 1081 SQGAPGT---PGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRG 1137
Query: 534 -AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPG-FG--AVPGALA-AAKAAKYGA----A 584
G G G+ GL G G AG+PG FG PG + + K G
Sbjct: 1138 DRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIG 1197
Query: 585 VPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAA 619
PGV G +G G G PG GP AA
Sbjct: 1198 PPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAA 1232
Score = 80.5 bits (197), Expect = 5e-15
Identities = 129/409 (31%), Positives = 145/409 (35%), Gaps = 63/409 (15%)
Query: 23 PSRPGGVPGAIPG----GVPGGVFYPGAGLGALGG-------GALGPGGKPLKPVPGGLA 71
P P GVPG G G PG +PG+ G +G G GP G+P K P GL
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSA-GRVGPPGPAGAPGPAGPLGEPGKEGPPGLR 944
Query: 72 G-AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAG----AGLGGVPGVGGL-GVSA 125
G G +G PG PG D + G AG G G+ G+ G
Sbjct: 945 GDPGSHGRVGDRGPAGPPGG--PGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRG 1002
Query: 126 APSVPGAVVPQPGAGVKPGKVPGVGLPGVY--PGGVLPGARFPGVGVLPGVPTGAGVKPK 183
+PG PG PGKV G G PG V P VG PG P G
Sbjct: 1003 ERGMPGL----PGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGE-PG-PEGPAGNDG 1056
Query: 184 APGVGGAFAGIPGVGPFGGPQPGVPLGYPIK--APKLPGGYGLPYTTGKL--PYGYGPGG 239
PG GA VG G P G P AP PG G P G+ P GP G
Sbjct: 1057 TPGRDGA------VGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIG 1110
Query: 240 VAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGG 299
G AGK G P GPQ + G G G G+ G+PG PG G
Sbjct: 1111 PPGRAGKRGLP-----GPQGPRGDKGDHGDRGDRGQKGHR---GFTGLQGLPGP-PGPNG 1161
Query: 300 IAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 358
G G P G P GP PGV G G P G PG P
Sbjct: 1162 EQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGP-EGPPGEPGPP 1220
Query: 359 VPGAGIPG---AAVPGVVS----------PEAAAKAAAKAAKYGARPGV 394
P G PG AA+ ++ PE AA K PGV
Sbjct: 1221 GP-PGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGV 1268
Score = 75.9 bits (185), Expect = 1e-13
Identities = 112/359 (31%), Positives = 132/359 (36%), Gaps = 50/359 (13%)
Query: 330 GGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKY 388
G FG G G G PG+ +PVV G G PG A P P + + K
Sbjct: 103 GNTNFGRGRKGQKGE--PGL------VPVVTGIRGRPGPAGP----PGSQGPRGERGPK- 149
Query: 389 GARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEAQ 447
RPG P G+ G PGV G PG G PG PG G+S
Sbjct: 150 -GRPG----------------PRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFS 192
Query: 448 AAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IG 506
A A K GL VG+ PG V P VG GL G A G PG PG +G
Sbjct: 193 AQMAGLDEKSGLGSQVGLMPG-SVGP-VGPRGPQGLQGQQGGAGPTG-PPGEPGDPGPMG 249
Query: 507 PGGVAAAAKSAAKVAAKAQLRAAAGLG----AGIPGLGVGVGVPGLGVGAGVPGLGVGAG 562
P G K + G AG PG G PGL PGL G
Sbjct: 250 PIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGL------PGLKGHRG 303
Query: 563 VPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKA 622
G G + A +K A G +G +G LG G+PG GP A A
Sbjct: 304 HKGLEGPKGEVGAP-GSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMP 362
Query: 623 AQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA--AKYGVAARPGFGLSPIFPG 679
+ G +G G+ G G G PG+ G G A + + G PG SP PG
Sbjct: 363 GKPGPMGPLGIPG-SSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPG 420
>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
sapiens]
Length = 1691
Score = 153 bits (386), Expect = 6e-37
Identities = 210/699 (30%), Positives = 277/699 (39%), Gaps = 91/699 (13%)
Query: 28 GVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
G+PG +PG G PG PG GL L G PG K +PG GL G
Sbjct: 602 GLPG-LPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQ---QGLPGSKGITLPC 657
Query: 86 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAAPSVPGAV-VPQ-PGAGVK 142
PG+ P G + K GL G PG G G P PG V +P+ PG
Sbjct: 658 IIPGSYGPSGFP-GTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGF--- 713
Query: 143 PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVP-----TGA--GVKPKAPGVGG----- 189
PG GLPG +PG LPG PG+ PG+P TG G + APG G
Sbjct: 714 PGPRGEKGLPG-FPG--LPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLT 770
Query: 190 ------AFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAG 242
+G+PG+ G G P P G +P PG G P T G GP G+ G
Sbjct: 771 GHKGFLGDSGLPGLKGVHGKPGLLGPKGER-GSPGTPGQVGQPGTPGSS----GPYGIKG 825
Query: 243 AAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 302
+G G P G+ + K + G G + G G+ G+PG PG+ G+ G
Sbjct: 826 KSGLPGAPGFPGI-----SGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGN-PGLVGLKG 879
Query: 303 V-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV----GVPGAGIP 357
G+P A A + + G+ G GF PG+ G+PG +PG G+PG+
Sbjct: 880 SPGSPGVAGLPALSGPKGEKGSV-----GFVGF-PGIPGLPG--IPGTRGLKGIPGSTGK 931
Query: 358 VVPG--AGIPGA----AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 411
+ P AG PG PG V + + + G + G G+ GFPG
Sbjct: 932 MGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQG-------SAGSNGFPG 984
Query: 412 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGV 471
G G AG PG G+PG G+PG+ + GL PG+ + G+
Sbjct: 985 ----PRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL-PGLKGSSGITG 1039
Query: 472 APGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAG 531
PG+ PG + G+ +PG+ PG PG+ G + + K Q +
Sbjct: 1040 FPGM---PGESGSQGIRGSPGL---PGASGLPGL-KGDNGQTVEISGSPGPKGQPGESGF 1092
Query: 532 LGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 590
G G GL +G PG G G+ G+PG PG A + G +PG G
Sbjct: 1093 KGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV--AGMRGEPG--LPGSSG 1148
Query: 591 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-LGVPGVGGL 649
GA+G +G PG + G G G G GV G G+PG G
Sbjct: 1149 HQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGE 1208
Query: 650 GGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACG 688
G P K G+ + G P G A L A G
Sbjct: 1209 KGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPG 1247
Score = 147 bits (371), Expect = 3e-35
Identities = 230/790 (29%), Positives = 291/790 (36%), Gaps = 168/790 (21%)
Query: 20 ILHPSRPGGVPGAI-PGGVPGGVFYPG----------AGLGALGG-------GALGPGGK 61
I P G PGA+ P G PG PG GLG G G GP G
Sbjct: 182 ITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGP 241
Query: 62 P-------LKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGG 114
P P G G+ G FP ++ P PG K K G+ G
Sbjct: 242 PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGP----PGFPGLGTTGEKGEKGEKGIPG 297
Query: 115 VPG----VGGLGVSAAPSVPG--AVVPQPG----AGVKPGKVPGVGLPGV-----YPGGV 159
+PG +G GV P G + PG G++ G+ +GLPG G V
Sbjct: 298 LPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIE-GQKGDIGLPGPDVFIDIDGAV 356
Query: 160 LPG-ARFPGVGVLPGVPTGAGVKP-KAP-GVGG--AFAGIPG-VGPFGGP----QPGVPL 209
+ G PGV LPG+ G++ + P GV G A +G+PG +GP G P G P
Sbjct: 357 ISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPG 416
Query: 210 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG-----------KAGYPTGTG-VGP 257
I A LPG GLP GP G G ++G+P G GP
Sbjct: 417 RTTIGAAGLPGRDGLP----------GPPGPPGPPSPEFETETLHNKESGFPGLRGEQGP 466
Query: 258 QA-AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAG--------- 302
+ K + F A GV P G G PG PG +PG+ G G
Sbjct: 467 KGNLGLKGIKGDSGFCACDGGV-PNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQG 525
Query: 303 -VGTPAAAAAAAAAAKAAKYG-AAAGLVPGGPGFG--------PGVVGVPGA-GVPGV-G 350
G P + K G + G PG GV+G PG GVPG+ G
Sbjct: 526 PAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPG 585
Query: 351 VPG------------AGIPVVPG-------AGIPGAAVPGVVSPEAAAKAAAKAAKYGAR 391
+PG G+P +PG G+PG +PG+ P K G +
Sbjct: 586 LPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQ 645
Query: 392 PGVGVGGI-----------PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV 440
G GI P+ G GFPG G G+PG G PG G G G PG+
Sbjct: 646 GLPGSKGITLPCIIPGSYGPSGFPGTPGFPG-PKGSRGLPGTPGQPGSSGSKGEPGSPGL 704
Query: 441 GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGV--------GVAPG 492
PE + K GL PG PG PG+ +PG+ + G APG
Sbjct: 705 VHLPELPGFPGPRGEK-GL-PGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPG 762
Query: 493 VGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVG 551
G+ G +G G+ V K L G G PG VG PG
Sbjct: 763 EQGLQGLTGHKGFLGDSGL----PGLKGVHGKPGLLGPKG-ERGSPGTPGQVGQPGTPGS 817
Query: 552 AGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGAAV----PGVLGGLGALGGVGI 600
+G G+ +G+PG PG K G+ V PG+ G G G VG+
Sbjct: 818 SGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGL 877
Query: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
G G A A + + G VG G+ GL G+PG GL GI P + K
Sbjct: 878 KGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLP----GIPGTRGLKGI-PGSTGKM 932
Query: 661 AKYGVAARPG 670
G A PG
Sbjct: 933 GPSGRAGTPG 942
Score = 140 bits (352), Expect = 5e-33
Identities = 226/769 (29%), Positives = 289/769 (37%), Gaps = 154/769 (20%)
Query: 23 PSRPG--GVPGAI-----PG--GVPGGVF-----YPGA-GLGALGG--GALGPGGKP-LK 64
P PG G+PG I PG G G +F PG GL L G G LG G P LK
Sbjct: 726 PGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLK 785
Query: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL--- 121
V G GL G + PG + G ++ Y K +GL G PG G+
Sbjct: 786 GVHGK---PGLLGPKGERGSPGTPGQVGQPGTPGSSGPY-GIKGKSGLPGAPGFPGISGH 841
Query: 122 ----GVSAAPSVPGAVVPQPGAGVK--PGKVPGVGL------PGVYPGGVLPGAR----- 164
G PG++V + G+K PG VGL PGV L G +
Sbjct: 842 PGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGS 901
Query: 165 -----FPGVGVLPGVPTGAGVKPKAPGVGGAF-----AGIPGV-------GPFGGPQPGV 207
FPG+ LPG+P G+K PG G AG PG GP G P P
Sbjct: 902 VGFVGFPGIPGLPGIPGTRGLKG-IPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRR 960
Query: 208 PLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAK 266
P+ +K K G G + G P G G AG G G P G+ P + K
Sbjct: 961 PMSNLWLKGDK--GSQGSAGSNG-FPGPRGDKGEAGRPGPPGLPGAPGL-PGIIKGVSGK 1016
Query: 267 AAAKFGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAA 324
G G LPG+ G +G+ G PG +PG G G+ G+P A+ G
Sbjct: 1017 PGPPGFMGIRG-LPGLKGSSGITGFPG-MPGESGSQGIRGSPGLPGASGLPGLKGDNGQT 1074
Query: 325 AGLV--------PGGPGFGP--------GVVGVPG-------AGVPG-VGVPGA-GIPVV 359
+ PG GF G +G PG GV G VG+PGA G P V
Sbjct: 1075 VEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV 1134
Query: 360 PGA----GIPGAA----------VPGVVSPEAAAKAAAKAAKYG--------ARPGVGVG 397
G G+PG++ PG++ P+ G PG +
Sbjct: 1135 AGMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSIT 1194
Query: 398 GIPTYG-----VGAGGFPGFGVGVGGIPGV------AGVPGVGGVPGVGGVPGVGISPEA 446
G+P G G+PG G+G G PG+ G PG+ G G+ G PG+ + P
Sbjct: 1195 GVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISL-PSL 1253
Query: 447 QAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGI 505
A + GL G PG PG PG G PG PG+ G
Sbjct: 1254 IAGQPGDPGRPGL-DGERGRPGPAGPPG---PPGPSSNQGDTGDPGF---PGIPGPKGPK 1306
Query: 506 GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPG 565
G G+ + ++ K +R G G PG VG PG G PG+ AG G
Sbjct: 1307 GDQGIPGFSGLPGELGLKG-MRGEPGF-MGTPG---KVGPPG---DPGFPGMKGKAGPRG 1358
Query: 566 FGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 625
+ G A+ PG LG G G G+ G GP +
Sbjct: 1359 SSGLQGDPGQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLP------ 1412
Query: 626 GLVGAAGLGGL--GVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 670
G+ G G GL G LG PG+ GL G P A + +G+ PG
Sbjct: 1413 GIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPG 1461
Score = 127 bits (319), Expect = 3e-29
Identities = 206/714 (28%), Positives = 258/714 (36%), Gaps = 139/714 (19%)
Query: 54 GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLG 113
G GP G P G G+ +GL FPG L P G K G
Sbjct: 50 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERG--FPGLLGPYG----------PKGDKGPM 97
Query: 114 GVPGVGGLGVSAAPSVPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171
GVPG LG++ P PG P+ PG G VG PG P G +PG+
Sbjct: 98 GVPGF--LGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPG--PDG------YPGLLGP 147
Query: 172 PGVPTGAGVKPKAPGVGGAF------AGIPGVGPFGGPQ--PGVPLGY-PIKAPKLPGGY 222
PG+P G K G+F G+PG+ GPQ PG P P P L G
Sbjct: 148 PGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPP 207
Query: 223 GLP---YTTGKLPYGY----GPGGVAGAAGKAGYPTGTG----VG-PQAAAAAAAKAAAK 270
G P G + G+ G G G G AG P TG +G P+ + + K
Sbjct: 208 GPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPK 267
Query: 271 FGAGAAGV--LPGVGGAGVPGVPG--AIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA 325
G +G PG+G G G G IPG+ G G +G+ K G
Sbjct: 268 GFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLG--- 324
Query: 326 GLVPGGPGFGPGVVGVPG-AGVPG----VGVPGAGIPVVPG-AGIPGAAVPGVVSPEAAA 379
PG GF G+ G G G+PG + + GA I PG G+PG +PG+ E
Sbjct: 325 --FPGLNGF-QGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPG--LPGLKGDEGI- 378
Query: 380 KAAAKAAKYGARPGVGVGGIPTY-----GVGAGGFPGF----------GVGVGGIPGVAG 424
G R GV G+P +G GFPG +G G+PG G
Sbjct: 379 --------QGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDG 430
Query: 425 VPGVGGVPG--------------VGGVPGVGISPEAQAAAAAKAAK--------YGLVPG 462
+PG G PG G PG+ + K K G VP
Sbjct: 431 LPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPN 490
Query: 463 VGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGP-GGVAAAAKSAAKV 520
G PG PG G+ G G G A G APG +GP G K +
Sbjct: 491 TG-PPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPI 549
Query: 521 AAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 580
+ Q G+PG G G G PG G+PG +PG +
Sbjct: 550 LSTIQ---------GMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGE 600
Query: 581 YGAAVPGVLGGLGALGGVGIPG-GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGL----- 633
G +PG+ G G G G+PG G+ G GP Q GL G+ G+
Sbjct: 601 KG--LPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCI 658
Query: 634 --GGLGVGGL----GVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 679
G G G G PG G G+P P + G PG P PG
Sbjct: 659 IPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPG 712
Score = 92.8 bits (229), Expect = 9e-19
Identities = 155/530 (29%), Positives = 195/530 (36%), Gaps = 89/530 (16%)
Query: 198 GPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYG----YGPGGVAGAAGKAGYPT 251
GP G P P G+ L G G P G PYG GP GV G G G P
Sbjct: 53 GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLG--PYGPKGDKGPMGVPGFLGINGIPG 110
Query: 252 GTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GTPA 307
G GP+ G G VG G G PG + PG+ G G G P
Sbjct: 111 HPGQPGPRGPPGLD---------GCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGA--GI 364
A + K G PG PG+ G+ G G PG PGA P P G
Sbjct: 162 LAPGSFKGMK------------GDPGL-PGLDGITGPQGAPGF--PGAVGPAGPPGLQGP 206
Query: 365 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGV 422
PG PG + P+ + K G + VG+ G P G F GF G G G
Sbjct: 207 PGP--PGPLGPDGNMGLGFQGEK-GVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGE 263
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 482
G G G+ G G PG+G + E + + G +PG+ G + GV PG
Sbjct: 264 PGPKGFPGISGPPGFPGLGTTGEK-----GEKGEKG-IPGLPGPRGPMGSEGVQGPPGQQ 317
Query: 483 LAPGVGVAPGVGVAPGV-GVAPGIG-PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
G PG+ G+ G IG PG A ++ GL PGL
Sbjct: 318 GKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGL----PGLK 373
Query: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 600
G+ GL +GVPGL +GVPG P K + G +G G G G+
Sbjct: 374 GDEGIQGLRGPSGVPGLPALSGVPG-ALGPQGFPGLKGDQ-GNPGRTTIGAAGLPGRDGL 431
Query: 601 PGGVVGAGPAAAAAAAKAA-AKAAQF-GLVGAAG-LGGLGVGGL---------------- 641
PG GP + + K + F GL G G G LG+ G+
Sbjct: 432 PGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNT 491
Query: 642 ------GVPGVGGLGGIPPAAAAKAAK-----YGVAARPGFGLSPIFPGG 680
G PG GL G+P A+ + G A PG + P+ P G
Sbjct: 492 GPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGL-VGPLGPSG 540
>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
sapiens]
Length = 1690
Score = 153 bits (386), Expect = 6e-37
Identities = 210/699 (30%), Positives = 277/699 (39%), Gaps = 91/699 (13%)
Query: 28 GVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
G+PG +PG G PG PG GL L G PG K +PG GL G
Sbjct: 601 GLPG-LPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQ---QGLPGSKGITLPC 656
Query: 86 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGV-GGLGVSAAPSVPGAV-VPQ-PGAGVK 142
PG+ P G + K GL G PG G G P PG V +P+ PG
Sbjct: 657 IIPGSYGPSGFP-GTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGF--- 712
Query: 143 PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVP-----TGA--GVKPKAPGVGG----- 189
PG GLPG +PG LPG PG+ PG+P TG G + APG G
Sbjct: 713 PGPRGEKGLPG-FPG--LPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLT 769
Query: 190 ------AFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAG 242
+G+PG+ G G P P G +P PG G P T G GP G+ G
Sbjct: 770 GHKGFLGDSGLPGLKGVHGKPGLLGPKGER-GSPGTPGQVGQPGTPGSS----GPYGIKG 824
Query: 243 AAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG 302
+G G P G+ + K + G G + G G+ G+PG PG+ G+ G
Sbjct: 825 KSGLPGAPGFPGI-----SGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGN-PGLVGLKG 878
Query: 303 V-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV----GVPGAGIP 357
G+P A A + + G+ G GF PG+ G+PG +PG G+PG+
Sbjct: 879 SPGSPGVAGLPALSGPKGEKGSV-----GFVGF-PGIPGLPG--IPGTRGLKGIPGSTGK 930
Query: 358 VVPG--AGIPGA----AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 411
+ P AG PG PG V + + + G + G G+ GFPG
Sbjct: 931 MGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQG-------SAGSNGFPG 983
Query: 412 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGV 471
G G AG PG G+PG G+PG+ + GL PG+ + G+
Sbjct: 984 ----PRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL-PGLKGSSGITG 1038
Query: 472 APGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAG 531
PG+ PG + G+ +PG+ PG PG+ G + + K Q +
Sbjct: 1039 FPGM---PGESGSQGIRGSPGL---PGASGLPGL-KGDNGQTVEISGSPGPKGQPGESGF 1091
Query: 532 LGA-GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 590
G G GL +G PG G G+ G+PG PG A + G +PG G
Sbjct: 1092 KGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV--AGMRGEPG--LPGSSG 1147
Query: 591 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-LGVPGVGGL 649
GA+G +G PG + G G G G GV G G+PG G
Sbjct: 1148 HQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGE 1207
Query: 650 GGIPPAAAAKAAKYGVAARPGFGLSPIFPGGACLGKACG 688
G P K G+ + G P G A L A G
Sbjct: 1208 KGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPG 1246
Score = 147 bits (371), Expect = 3e-35
Identities = 230/790 (29%), Positives = 291/790 (36%), Gaps = 168/790 (21%)
Query: 20 ILHPSRPGGVPGAI-PGGVPGGVFYPG----------AGLGALGG-------GALGPGGK 61
I P G PGA+ P G PG PG GLG G G GP G
Sbjct: 181 ITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGP 240
Query: 62 P-------LKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGG 114
P P G G+ G FP ++ P PG K K G+ G
Sbjct: 241 PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGP----PGFPGLGTTGEKGEKGEKGIPG 296
Query: 115 VPG----VGGLGVSAAPSVPG--AVVPQPG----AGVKPGKVPGVGLPGV-----YPGGV 159
+PG +G GV P G + PG G++ G+ +GLPG G V
Sbjct: 297 LPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIE-GQKGDIGLPGPDVFIDIDGAV 355
Query: 160 LPG-ARFPGVGVLPGVPTGAGVKP-KAP-GVGG--AFAGIPG-VGPFGGP----QPGVPL 209
+ G PGV LPG+ G++ + P GV G A +G+PG +GP G P G P
Sbjct: 356 ISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPG 415
Query: 210 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAG-----------KAGYPTGTG-VGP 257
I A LPG GLP GP G G ++G+P G GP
Sbjct: 416 RTTIGAAGLPGRDGLP----------GPPGPPGPPSPEFETETLHNKESGFPGLRGEQGP 465
Query: 258 QA-AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAG--------- 302
+ K + F A GV P G G PG PG +PG+ G G
Sbjct: 466 KGNLGLKGIKGDSGFCACDGGV-PNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQG 524
Query: 303 -VGTPAAAAAAAAAAKAAKYG-AAAGLVPGGPGFG--------PGVVGVPGA-GVPGV-G 350
G P + K G + G PG GV+G PG GVPG+ G
Sbjct: 525 PAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPG 584
Query: 351 VPG------------AGIPVVPG-------AGIPGAAVPGVVSPEAAAKAAAKAAKYGAR 391
+PG G+P +PG G+PG +PG+ P K G +
Sbjct: 585 LPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQ 644
Query: 392 PGVGVGGI-----------PTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV 440
G GI P+ G GFPG G G+PG G PG G G G PG+
Sbjct: 645 GLPGSKGITLPCIIPGSYGPSGFPGTPGFPG-PKGSRGLPGTPGQPGSSGSKGEPGSPGL 703
Query: 441 GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGV--------GVAPG 492
PE + K GL PG PG PG+ +PG+ + G APG
Sbjct: 704 VHLPELPGFPGPRGEK-GL-PGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPG 761
Query: 493 VGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVG 551
G+ G +G G+ V K L G G PG VG PG
Sbjct: 762 EQGLQGLTGHKGFLGDSGL----PGLKGVHGKPGLLGPKG-ERGSPGTPGQVGQPGTPGS 816
Query: 552 AGVPGLGVGAGVPGFGAVPGAL-------AAAKAAKYGAAV----PGVLGGLGALGGVGI 600
+G G+ +G+PG PG K G+ V PG+ G G G VG+
Sbjct: 817 SGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGL 876
Query: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
G G A A + + G VG G+ GL G+PG GL GI P + K
Sbjct: 877 KGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLP----GIPGTRGLKGI-PGSTGKM 931
Query: 661 AKYGVAARPG 670
G A PG
Sbjct: 932 GPSGRAGTPG 941
Score = 140 bits (352), Expect = 5e-33
Identities = 226/769 (29%), Positives = 289/769 (37%), Gaps = 154/769 (20%)
Query: 23 PSRPG--GVPGAI-----PG--GVPGGVF-----YPGA-GLGALGG--GALGPGGKP-LK 64
P PG G+PG I PG G G +F PG GL L G G LG G P LK
Sbjct: 725 PGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLK 784
Query: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL--- 121
V G GL G + PG + G ++ Y K +GL G PG G+
Sbjct: 785 GVHGK---PGLLGPKGERGSPGTPGQVGQPGTPGSSGPY-GIKGKSGLPGAPGFPGISGH 840
Query: 122 ----GVSAAPSVPGAVVPQPGAGVK--PGKVPGVGL------PGVYPGGVLPGAR----- 164
G PG++V + G+K PG VGL PGV L G +
Sbjct: 841 PGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGS 900
Query: 165 -----FPGVGVLPGVPTGAGVKPKAPGVGGAF-----AGIPGV-------GPFGGPQPGV 207
FPG+ LPG+P G+K PG G AG PG GP G P P
Sbjct: 901 VGFVGFPGIPGLPGIPGTRGLKG-IPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRR 959
Query: 208 PLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAK 266
P+ +K K G G + G P G G AG G G P G+ P + K
Sbjct: 960 PMSNLWLKGDK--GSQGSAGSNG-FPGPRGDKGEAGRPGPPGLPGAPGL-PGIIKGVSGK 1015
Query: 267 AAAKFGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAA 324
G G LPG+ G +G+ G PG +PG G G+ G+P A+ G
Sbjct: 1016 PGPPGFMGIRG-LPGLKGSSGITGFPG-MPGESGSQGIRGSPGLPGASGLPGLKGDNGQT 1073
Query: 325 AGLV--------PGGPGFGP--------GVVGVPG-------AGVPG-VGVPGA-GIPVV 359
+ PG GF G +G PG GV G VG+PGA G P V
Sbjct: 1074 VEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGV 1133
Query: 360 PGA----GIPGAA----------VPGVVSPEAAAKAAAKAAKYG--------ARPGVGVG 397
G G+PG++ PG++ P+ G PG +
Sbjct: 1134 AGMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSIT 1193
Query: 398 GIPTYG-----VGAGGFPGFGVGVGGIPGV------AGVPGVGGVPGVGGVPGVGISPEA 446
G+P G G+PG G+G G PG+ G PG+ G G+ G PG+ + P
Sbjct: 1194 GVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISL-PSL 1252
Query: 447 QAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGI 505
A + GL G PG PG PG G PG PG+ G
Sbjct: 1253 IAGQPGDPGRPGL-DGERGRPGPAGPPG---PPGPSSNQGDTGDPGF---PGIPGPKGPK 1305
Query: 506 GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPG 565
G G+ + ++ K +R G G PG VG PG G PG+ AG G
Sbjct: 1306 GDQGIPGFSGLPGELGLKG-MRGEPGF-MGTPG---KVGPPG---DPGFPGMKGKAGPRG 1357
Query: 566 FGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 625
+ G A+ PG LG G G G+ G GP +
Sbjct: 1358 SSGLQGDPGQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLP------ 1411
Query: 626 GLVGAAGLGGL--GVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 670
G+ G G GL G LG PG+ GL G P A + +G+ PG
Sbjct: 1412 GIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPG 1460
Score = 127 bits (319), Expect = 3e-29
Identities = 206/714 (28%), Positives = 258/714 (36%), Gaps = 139/714 (19%)
Query: 54 GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLG 113
G GP G P G G+ +GL FPG L P G K G
Sbjct: 49 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERG--FPGLLGPYG----------PKGDKGPM 96
Query: 114 GVPGVGGLGVSAAPSVPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171
GVPG LG++ P PG P+ PG G VG PG P G +PG+
Sbjct: 97 GVPGF--LGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPG--PDG------YPGLLGP 146
Query: 172 PGVPTGAGVKPKAPGVGGAF------AGIPGVGPFGGPQ--PGVPLGY-PIKAPKLPGGY 222
PG+P G K G+F G+PG+ GPQ PG P P P L G
Sbjct: 147 PGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPP 206
Query: 223 GLP---YTTGKLPYGY----GPGGVAGAAGKAGYPTGTG----VG-PQAAAAAAAKAAAK 270
G P G + G+ G G G G AG P TG +G P+ + + K
Sbjct: 207 GPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPK 266
Query: 271 FGAGAAGV--LPGVGGAGVPGVPG--AIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA 325
G +G PG+G G G G IPG+ G G +G+ K G
Sbjct: 267 GFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLG--- 323
Query: 326 GLVPGGPGFGPGVVGVPG-AGVPG----VGVPGAGIPVVPG-AGIPGAAVPGVVSPEAAA 379
PG GF G+ G G G+PG + + GA I PG G+PG +PG+ E
Sbjct: 324 --FPGLNGF-QGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPG--LPGLKGDEGI- 377
Query: 380 KAAAKAAKYGARPGVGVGGIPTY-----GVGAGGFPGF----------GVGVGGIPGVAG 424
G R GV G+P +G GFPG +G G+PG G
Sbjct: 378 --------QGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDG 429
Query: 425 VPGVGGVPG--------------VGGVPGVGISPEAQAAAAAKAAK--------YGLVPG 462
+PG G PG G PG+ + K K G VP
Sbjct: 430 LPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPN 489
Query: 463 VGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG-IGP-GGVAAAAKSAAKV 520
G PG PG G+ G G G A G APG +GP G K +
Sbjct: 490 TG-PPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPI 548
Query: 521 AAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAK 580
+ Q G+PG G G G PG G+PG +PG +
Sbjct: 549 LSTIQ---------GMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGE 599
Query: 581 YGAAVPGVLGGLGALGGVGIPG-GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGL----- 633
G +PG+ G G G G+PG G+ G GP Q GL G+ G+
Sbjct: 600 KG--LPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCI 657
Query: 634 --GGLGVGGL----GVPGVGGLGGIP--PAAAAKAAKYGVAARPGFGLSPIFPG 679
G G G G PG G G+P P + G PG P PG
Sbjct: 658 IPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPG 711
Score = 92.8 bits (229), Expect = 9e-19
Identities = 155/530 (29%), Positives = 195/530 (36%), Gaps = 89/530 (16%)
Query: 198 GPFGGPQPGVPLGYPIKA--PKLPGGYGLPYTTGKLPYG----YGPGGVAGAAGKAGYPT 251
GP G P P G+ L G G P G PYG GP GV G G G P
Sbjct: 52 GPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLG--PYGPKGDKGPMGVPGFLGINGIPG 109
Query: 252 GTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI--PGIGGIAGV-GTPA 307
G GP+ G G VG G G PG + PG+ G G G P
Sbjct: 110 HPGQPGPRGPPGLD---------GCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGA--GI 364
A + K G PG PG+ G+ G G PG PGA P P G
Sbjct: 161 LAPGSFKGMK------------GDPGL-PGLDGITGPQGAPGF--PGAVGPAGPPGLQGP 205
Query: 365 PGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPGV 422
PG PG + P+ + K G + VG+ G P G F GF G G G
Sbjct: 206 PGP--PGPLGPDGNMGLGFQGEK-GVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGE 262
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 482
G G G+ G G PG+G + E + + G +PG+ G + GV PG
Sbjct: 263 PGPKGFPGISGPPGFPGLGTTGEK-----GEKGEKG-IPGLPGPRGPMGSEGVQGPPGQQ 316
Query: 483 LAPGVGVAPGVGVAPGV-GVAPGIG-PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLG 540
G PG+ G+ G IG PG A ++ GL PGL
Sbjct: 317 GKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGL----PGLK 372
Query: 541 VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGI 600
G+ GL +GVPGL +GVPG P K + G +G G G G+
Sbjct: 373 GDEGIQGLRGPSGVPGLPALSGVPG-ALGPQGFPGLKGDQ-GNPGRTTIGAAGLPGRDGL 430
Query: 601 PGGVVGAGPAAAAAAAKAA-AKAAQF-GLVGAAG-LGGLGVGGL---------------- 641
PG GP + + K + F GL G G G LG+ G+
Sbjct: 431 PGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNT 490
Query: 642 ------GVPGVGGLGGIPPAAAAKAAK-----YGVAARPGFGLSPIFPGG 680
G PG GL G+P A+ + G A PG + P+ P G
Sbjct: 491 GPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGL-VGPLGPSG 539
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 149 bits (376), Expect = 8e-36
Identities = 203/647 (31%), Positives = 235/647 (36%), Gaps = 160/647 (24%)
Query: 52 GGGALGPGG----KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAK 107
GGGA G G K ++P+ G G G G + + P L+P
Sbjct: 29 GGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLP--LLP-------------- 72
Query: 108 AGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVY----PGGVLPGA 163
L G PG P PG P PG PGK PG+G PG++ P G PG
Sbjct: 73 --MDLKGEPG--------PPGKPGPRGP-PGPPGFPGK-PGMGKPGLHGQPGPAGP-PGF 119
Query: 164 RFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQ--PGVPLGYPIKAPKLPGG 221
G PG+P G P PG+ G GI G GP PG+P I P PG
Sbjct: 120 SRMGKAGPPGLPGKVG-PPGQPGLRGE-PGIRGDQGLRGPPGPPGLPGPSGITIPGKPGA 177
Query: 222 YGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPG 281
G+P GP G G G G P GP G G G LPG
Sbjct: 178 QGVP----------GPPGFQGEPGPQGEP-----GPPGDRGLKGDN----GVGQPG-LPG 217
Query: 282 VGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 341
G G G PG PG+ G AG+G P A + G VPG G PG VG
Sbjct: 218 APGQG--GAPGP-PGLPGPAGLGKPGLDGLPGAPGDKGESGPPG--VPGPRG-EPGAVGP 271
Query: 342 PGA-GVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP 400
G GV GVGVPGA AG+PG P GA+ G G P
Sbjct: 272 KGPPGVDGVGVPGA-------AGLPGPQGPS-----------------GAKGEPGTRGPP 307
Query: 401 TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGV---GGVPGVGISPEAQAAAAAKAAKY 457
+G G+ G+ G+PG G G GVPG+ G PG P Q
Sbjct: 308 GL-IGPTGY-----GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQ------- 354
Query: 458 GLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKS 516
G+G PG+ PG PG PG G G PGV G+ GP G+A
Sbjct: 355 ----GLGGPPGL---PGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLA----- 402
Query: 517 AAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAA 576
G PG+ G+PG G PG G PGF PG
Sbjct: 403 ------------------GKPGVPGERGLPG---AHGPPGPTGPKGEPGFTGRPGG---- 437
Query: 577 KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL 636
PGV G LG G +G+PG GP+ A GL G G GL
Sbjct: 438 ---------PGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGL 488
Query: 637 ----GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
G G G PG G G PP G PG P PG
Sbjct: 489 PGPPGEGRAGEPGTAGPTG-PPGVPGSPGITGPPGPPGPPGPPGAPG 534
Score = 137 bits (344), Expect = 4e-32
Identities = 173/533 (32%), Positives = 212/533 (39%), Gaps = 56/533 (10%)
Query: 15 LLLLSILHPSRPGGVPGAIPGGVPGGVFYPGA-GLGALG-GGALGPGGKPLKPVPGGLAG 72
LL + + P G PG P G PG +PG G+G G G GP G P G
Sbjct: 70 LLPMDLKGEPGPPGKPG--PRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGP 127
Query: 73 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGA 132
GL +G G PG D + + G G+PG G+ + P G
Sbjct: 128 PGLPGKVGPPGQPGLRGE--PGIRGD-----QGLRGPPGPPGLPGPSGITIPGKPGAQGV 180
Query: 133 VVP-----QPGAGVKPGKVPGVGLPGVYPGGV--LPGARFPGVGVLPG---VPTGAGV-K 181
P +PG +PG GL G G LPGA PG G PG +P AG+ K
Sbjct: 181 PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGA--PGQGGAPGPPGLPGPAGLGK 238
Query: 182 PKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGV 240
P G+ GA GP G P P G P K P G G+P G LP GP G
Sbjct: 239 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAG-LPGPQGPSGA 297
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGI 300
G G G P G +GP K G AGV +G G PG G PG G
Sbjct: 298 KGEPGTRG-PPGL-IGPTGYGMPGLPGP-KGDRGPAGVPGLLGDRGEPGEDGE-PGEQGP 353
Query: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVP 360
G+G P +A + G GPG PGV G+ G P G+ AG P VP
Sbjct: 354 QGLGGPPGLPGSAGLP--GRRGPPGPKGEAGPGGPPGVPGIRGDQGPS-GL--AGKPGVP 408
Query: 361 GA-GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFG--VGV 416
G G+PGA PG P+ + G +G G +G G PG G+
Sbjct: 409 GERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKG----DLGLPGQPGLRGPSGI 464
Query: 417 GGIPGVAGVPGVGGVPGVGGVPGV-GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 475
G+ G AG G G+PG+ G PG+ G E +A A G PGV +PG+ PG
Sbjct: 465 PGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTG-PPGVPGSPGITGPPGP 523
Query: 476 GVAPGVGLAPGVGVAPGV-----------GVAPGVGVAPGIGPGGVAAAAKSA 517
PG APG G+ G G G P G G ++A A A
Sbjct: 524 PGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPA 576
Score = 65.9 bits (159), Expect = 1e-10
Identities = 93/283 (32%), Positives = 112/283 (39%), Gaps = 37/283 (13%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVT 86
G+PG +PG P G P G LG G G G+P + P GL G G P
Sbjct: 316 GMPG-LPG--PKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRR 372
Query: 87 FP----GALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVP--QPGA 139
P G PGG + + +GL G PGV G G+ A PG P +PG
Sbjct: 373 GPPGPKGEAGPGG-PPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGF 431
Query: 140 GVKPGKVPGV-------------GLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPG 186
+PG PGV G PG+ +PG + P + P G +P PG
Sbjct: 432 TGRPGG-PGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPG 490
Query: 187 VGG-AFAGIPGV-GPFGGP----QPGV--PLGYPIKAPKLPGGYGLPYTTGKLPYGYGPG 238
G AG PG GP G P PG+ P G P P PG G TG G
Sbjct: 491 PPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPP-GPPGPPGAPGAFDETGIAGLHLPNG 549
Query: 239 GVAGAA-GKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLP 280
GV GA GK G P G+G +A A A A A +P
Sbjct: 550 GVEGAVLGKGGKPQ-FGLGELSAHATPAFTAVLTSPFPASGMP 591
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 149 bits (375), Expect = 1e-35
Identities = 165/503 (32%), Positives = 199/503 (39%), Gaps = 79/503 (15%)
Query: 136 QPGAGVKPGK--VPGVGLPGVY----PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 189
+PG PG +PG G+PG+ P G PG PG+ +PG P G+ PG G
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGY-PGVGKPGMPGMPGKPGAMGM----PGAKG 179
Query: 190 AFAGIPGVGPFGGPQPGVPLGYPIKAPKL--PGGYGLPYTTGKLPYG-YGPGGVAGAAGK 246
+GP G P P P G P P + PGG GLP G P G GP G+ G G
Sbjct: 180 EIGQKGEIGPMGIPGPQGPPG-PHGLPGIGKPGGPGLPGQPG--PKGDRGPKGLPGPQGL 236
Query: 247 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTP 306
G G G A PGV G PG+ G PG G+ GVG P
Sbjct: 237 RGPKGDKGFGMPGA-------------------PGVKGP--PGMHGP-PGPVGLPGVGKP 274
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA-GIPVVPG--AG 363
K GA P GP PGV G P G+PG+G PG GIP PG G
Sbjct: 275 GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP--GIPGIGKPGQDGIPGQPGFPGG 332
Query: 364 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPG 421
+PG+ P PG+G G P G GG PG +G G G
Sbjct: 333 KGEQGLPGLPGPPGL-------------PGIGKPGFPGPKGDRGMGGVPG-ALGPRGEKG 378
Query: 422 VAGVPGVGGVPGVGGVPGV--GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAP 479
G PG+GG PG G+PG+ + P + G+V G PG PG+ P
Sbjct: 379 PIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQG-PPGPKGEPGLQGFP 437
Query: 480 GVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG----A 534
G G PG+ PG +G G GV + K + G
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPP 497
Query: 535 GIPGLG---VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGG 591
GIPG+G +G PG+ G PGL G PG G PG A +G PG G
Sbjct: 498 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK-PGV-----AGLHGP--PGKPGA 549
Query: 592 LGALGGVGIPGGVVGAGPAAAAA 614
LG G G+PG GP A
Sbjct: 550 LGPQGQPGLPGPPGPPGPPGPPA 572
Score = 137 bits (344), Expect = 4e-32
Identities = 175/515 (33%), Positives = 214/515 (41%), Gaps = 81/515 (15%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGG----------GAL 56
A P+ G + L S+ P G PG P G PG PG G+ + G G
Sbjct: 103 AVPKKGKEIPLASLRGEQGPRGEPG--PRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKP 160
Query: 57 GPGGKPLKPVPGGLAGAGLGAGL-GAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGV 115
G G P KP G+ GA G G + PG P G K G GL G
Sbjct: 161 GMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPG--GPGLPGQ 218
Query: 116 PGV-GGLGVSAAPSVPGAVVPQPGAGVKPGKVPGV-GLPGVY--PGGV-LPGARFPGVGV 170
PG G G P G P+ G PGV G PG++ PG V LPG PGV
Sbjct: 219 PGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTG 278
Query: 171 LPGVPTGAGVKPKAPGVGGAFA--GIPGVGPFGGPQPGVP-LGYPIKAPKLPGGYGLPYT 227
PG P G KP APG G G+PGV GP PG+P +G P + +PG G P
Sbjct: 279 FPG-PQGPLGKPGAPGEPGPQGPIGVPGVQ---GP-PGIPGIGKPGQ-DGIPGQPGFPGG 332
Query: 228 TGK--LPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL--PGVG 283
G+ LP GP G+ G GK G+P GP+ A G G + PG+G
Sbjct: 333 KGEQGLPGLPGPPGLPGI-GKPGFP-----GPKGDRGMGGVPGALGPRGEKGPIGAPGIG 386
Query: 284 GA-GVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA--GL--VPGGPGFGPG 337
G G PG+PG IPG G G +G P G GL PG PGF G
Sbjct: 387 GPPGEPGLPG-IPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF-LG 444
Query: 338 VVGVPGA-GVPG-VGVPG-AGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV 394
VG PG G+PG +G G AG VPG +PG VPG++ P+ G PG+
Sbjct: 445 EVGPPGMRGLPGPIGPKGEAGQKGVPG--LPG--VPGLLGPKGEPGIPGDQGLQGP-PGI 499
Query: 395 -GVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVG-----------------------G 430
G+GG P+ +G G PG G G+PG G PG+G G
Sbjct: 500 PGIGG-PSGPIGPPGIPG-PKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPG 557
Query: 431 VPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGV 465
+PG G PG P +Y G+G+
Sbjct: 558 LPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGI 592
Score = 134 bits (336), Expect = 4e-31
Identities = 179/557 (32%), Positives = 211/557 (37%), Gaps = 119/557 (21%)
Query: 123 VSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 182
+ AP + VP+ G ++P L G PG R P P
Sbjct: 93 IQPAPRMGKEAVPKKGK-----EIPLASLRGEQGPRGEPGPRGP---------------P 132
Query: 183 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVA 241
PG+ G GIPG+ GPQ GYP + P +PG G P G +P G G
Sbjct: 133 GPPGLPGH--GIPGIKGKPGPQ-----GYPGVGKPGMPGMPGKPGAMG-MPGAKGEIGQK 184
Query: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 301
G G G P GPQ G LPG+G G PG+PG PG G
Sbjct: 185 GEIGPMGIP-----GPQ-------------GPPGPHGLPGIGKPGGPGLPGQ-PGPKGDR 225
Query: 302 GV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGV-GVPGAGIP 357
G G P A V G PG PG VG+PG G PGV G PG P
Sbjct: 226 GPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP 285
Query: 358 VVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV---GGIPTYGVGAGGFPGFG- 413
+ G PGA PG P+ G PG+G GIP G GFPG
Sbjct: 286 L----GKPGA--PGEPGPQGPIGVPGVQGPPGI-PGIGKPGQDGIP----GQPGFPGGKG 334
Query: 414 -VGVGGIPGVAGVPGVG--GVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 470
G+ G+PG G+PG+G G PG G G+G P A K +G APG+G
Sbjct: 335 EQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGP-------IG-APGIG 386
Query: 471 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAA 529
PG PG+ PG PG PG GI GP G +
Sbjct: 387 GPPGEPGLPGI---PGPMGPPGAIGFPGPKGEGGIVGPQGPPGP-------------KGE 430
Query: 530 AGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGA-------GVPGFGAVPGALAAAKAAK 580
GL G PG VG PG+ G+PG +G GVPG VPG L
Sbjct: 431 PGLQGFPGKPGFLGEVGPPGM---RGLPG-PIGPKGEAGQKGVPGLPGVPGLLGPK---- 482
Query: 581 YGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG 640
PG+ G G G GIPG +GP + G G G+G GV G
Sbjct: 483 ---GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAG 539
Query: 641 L----GVPGVGGLGGIP 653
L G PG G G P
Sbjct: 540 LHGPPGKPGALGPQGQP 556
Score = 124 bits (310), Expect = 4e-28
Identities = 163/540 (30%), Positives = 198/540 (36%), Gaps = 109/540 (20%)
Query: 179 GVKPKAPGVGGAFAG-IPGVGPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLP 232
G+KP P + IP P G P +PL A P L G P+ LP
Sbjct: 32 GIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPH----LP 87
Query: 233 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
A GK P P A+ + G PG+ G G+PG+ G
Sbjct: 88 QYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKG 147
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG 348
PG G GVG P +PG PG PG +G+PGA G G
Sbjct: 148 K-PGPQGYPGVGKPG--------------------MPGMPG-KPGAMGMPGAKGEIGQKG 185
Query: 349 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
+G+PG P P G+PG PG P + K G R G+ G P
Sbjct: 186 EIGPMGIPGPQGPPGPH-GLPGIGKPG--GPGLPGQPGPK----GDRGPKGLPG-PQGLR 237
Query: 405 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 464
G G GFG+ G PGV G PG+ G PG G+PGVG PGV
Sbjct: 238 GPKGDKGFGMP--GAPGVKGPPGMHGPPGPVGLPGVG------------------KPGVT 277
Query: 465 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 524
PG G APG G PGV PG+ PGIG G K
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGI---PGIGKPGQDGIPGQPGFPGGKG 334
Query: 525 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGA 583
+ G+PGL G+PG+ G PG G G G VPGAL + GA
Sbjct: 335 E--------QGLPGLPGPPGLPGI----GKPGFPGPKGDRGMGGVPGALGPRGEKGPIGA 382
Query: 584 ----------AVPGVLGGLGALGGVGIP-----GGVVG----AGPAAAAAAAKAAAKAAQ 624
+PG+ G +G G +G P GG+VG GP K
Sbjct: 383 PGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF 442
Query: 625 FGLVGAAGLGGL-----GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
G VG G+ GL G G GV GL G+P K + G+ G P PG
Sbjct: 443 LGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPK-GEPGIPGDQGLQGPPGIPG 501
Score = 110 bits (276), Expect = 3e-24
Identities = 139/415 (33%), Positives = 164/415 (39%), Gaps = 76/415 (18%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGG-----GALGPGGKPLKPVPGGLAGAGL 75
P PG G PG G PG V PG G + G G LG G P +P P G G
Sbjct: 248 PGAPGVKGPPGM--HGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPG 305
Query: 76 GAGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV 134
G P + PG +PG + K GL G+PG GL P PG
Sbjct: 306 VQGPPGIPGIGKPGQDGIPG-----QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPG--- 357
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGI 194
P+ G+ G VPG P G + GA PG+G PG P G+ P G GA G
Sbjct: 358 PKGDRGM--GGVPGALGPRGEKGPI--GA--PGIGGPPGEPGLPGI-PGPMGPPGAI-GF 409
Query: 195 PG-------VGPFGGPQP-GVP--LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAA 244
PG VGP G P P G P G+P K P G G P G LP GP G AG
Sbjct: 410 PGPKGEGGIVGPQGPPGPKGEPGLQGFPGK-PGFLGEVGPPGMRG-LPGPIGPKGEAGQK 467
Query: 245 GKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIG 298
G G P G+ GP+ + G G+ G G PG+PG +PG
Sbjct: 468 GVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPP 527
Query: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPGAGI 356
G G+G P A K PG GP PG+ G PG PG P A +
Sbjct: 528 GFPGIGKPGVAGLHGPPGK-----------PGALGPQGQPGLPGPPGP--PGPPGPPAVM 574
Query: 357 PVVP---GAGIP--GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
P P G +P G + GV P A YGA+ G G P Y + A
Sbjct: 575 PPTPPPQGEYLPDMGLGIDGVKPPHA----------YGAKKGKNGG--PAYEMPA 617
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 149 bits (375), Expect = 1e-35
Identities = 165/503 (32%), Positives = 199/503 (39%), Gaps = 79/503 (15%)
Query: 136 QPGAGVKPGK--VPGVGLPGVY----PGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 189
+PG PG +PG G+PG+ P G PG PG+ +PG P G+ PG G
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGY-PGVGKPGMPGMPGKPGAMGM----PGAKG 179
Query: 190 AFAGIPGVGPFGGPQPGVPLGYPIKAPKL--PGGYGLPYTTGKLPYG-YGPGGVAGAAGK 246
+GP G P P P G P P + PGG GLP G P G GP G+ G G
Sbjct: 180 EIGQKGEIGPMGIPGPQGPPG-PHGLPGIGKPGGPGLPGQPG--PKGDRGPKGLPGPQGL 236
Query: 247 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTP 306
G G G A PGV G PG+ G PG G+ GVG P
Sbjct: 237 RGPKGDKGFGMPGA-------------------PGVKGP--PGMHGP-PGPVGLPGVGKP 274
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGA-GIPVVPG--AG 363
K GA P GP PGV G P G+PG+G PG GIP PG G
Sbjct: 275 GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP--GIPGIGKPGQDGIPGQPGFPGG 332
Query: 364 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGI--PTYGVGAGGFPGFGVGVGGIPG 421
+PG+ P PG+G G P G GG PG +G G G
Sbjct: 333 KGEQGLPGLPGPPGL-------------PGIGKPGFPGPKGDRGMGGVPG-ALGPRGEKG 378
Query: 422 VAGVPGVGGVPGVGGVPGV--GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAP 479
G PG+GG PG G+PG+ + P + G+V G PG PG+ P
Sbjct: 379 PIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQG-PPGPKGEPGLQGFP 437
Query: 480 GVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG----A 534
G G PG+ PG +G G GV + K + G
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPP 497
Query: 535 GIPGLG---VGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGG 591
GIPG+G +G PG+ G PGL G PG G PG A +G PG G
Sbjct: 498 GIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK-PGV-----AGLHGP--PGKPGA 549
Query: 592 LGALGGVGIPGGVVGAGPAAAAA 614
LG G G+PG GP A
Sbjct: 550 LGPQGQPGLPGPPGPPGPPGPPA 572
Score = 137 bits (344), Expect = 4e-32
Identities = 175/515 (33%), Positives = 214/515 (41%), Gaps = 81/515 (15%)
Query: 7 AAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGG----------GAL 56
A P+ G + L S+ P G PG P G PG PG G+ + G G
Sbjct: 103 AVPKKGKEIPLASLRGEQGPRGEPG--PRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKP 160
Query: 57 GPGGKPLKPVPGGLAGAGLGAGL-GAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGV 115
G G P KP G+ GA G G + PG P G K G GL G
Sbjct: 161 GMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPG--GPGLPGQ 218
Query: 116 PGV-GGLGVSAAPSVPGAVVPQPGAGVKPGKVPGV-GLPGVY--PGGV-LPGARFPGVGV 170
PG G G P G P+ G PGV G PG++ PG V LPG PGV
Sbjct: 219 PGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTG 278
Query: 171 LPGVPTGAGVKPKAPGVGGAFA--GIPGVGPFGGPQPGVP-LGYPIKAPKLPGGYGLPYT 227
PG P G KP APG G G+PGV GP PG+P +G P + +PG G P
Sbjct: 279 FPG-PQGPLGKPGAPGEPGPQGPIGVPGVQ---GP-PGIPGIGKPGQ-DGIPGQPGFPGG 332
Query: 228 TGK--LPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL--PGVG 283
G+ LP GP G+ G GK G+P GP+ A G G + PG+G
Sbjct: 333 KGEQGLPGLPGPPGLPGI-GKPGFP-----GPKGDRGMGGVPGALGPRGEKGPIGAPGIG 386
Query: 284 GA-GVPGVPGAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA--GL--VPGGPGFGPG 337
G G PG+PG IPG G G +G P G GL PG PGF G
Sbjct: 387 GPPGEPGLPG-IPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF-LG 444
Query: 338 VVGVPGA-GVPG-VGVPG-AGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGV 394
VG PG G+PG +G G AG VPG +PG VPG++ P+ G PG+
Sbjct: 445 EVGPPGMRGLPGPIGPKGEAGQKGVPG--LPG--VPGLLGPKGEPGIPGDQGLQGP-PGI 499
Query: 395 -GVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVG-----------------------G 430
G+GG P+ +G G PG G G+PG G PG+G G
Sbjct: 500 PGIGG-PSGPIGPPGIPG-PKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPG 557
Query: 431 VPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGV 465
+PG G PG P +Y G+G+
Sbjct: 558 LPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGI 592
Score = 134 bits (336), Expect = 4e-31
Identities = 179/557 (32%), Positives = 211/557 (37%), Gaps = 119/557 (21%)
Query: 123 VSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKP 182
+ AP + VP+ G ++P L G PG R P P
Sbjct: 93 IQPAPRMGKEAVPKKGK-----EIPLASLRGEQGPRGEPGPRGP---------------P 132
Query: 183 KAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPKLPGGYGLPYTTGKLPYGYGPGGVA 241
PG+ G GIPG+ GPQ GYP + P +PG G P G +P G G
Sbjct: 133 GPPGLPGH--GIPGIKGKPGPQ-----GYPGVGKPGMPGMPGKPGAMG-MPGAKGEIGQK 184
Query: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIA 301
G G G P GPQ G LPG+G G PG+PG PG G
Sbjct: 185 GEIGPMGIP-----GPQ-------------GPPGPHGLPGIGKPGGPGLPGQ-PGPKGDR 225
Query: 302 GV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG--PGVVGVPGAGVPGV-GVPGAGIP 357
G G P A V G PG PG VG+PG G PGV G PG P
Sbjct: 226 GPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP 285
Query: 358 VVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGV---GGIPTYGVGAGGFPGFG- 413
+ G PGA PG P+ G PG+G GIP G GFPG
Sbjct: 286 L----GKPGA--PGEPGPQGPIGVPGVQGPPGI-PGIGKPGQDGIP----GQPGFPGGKG 334
Query: 414 -VGVGGIPGVAGVPGVG--GVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 470
G+ G+PG G+PG+G G PG G G+G P A K +G APG+G
Sbjct: 335 EQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGP-------IG-APGIG 386
Query: 471 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAA 529
PG PG+ PG PG PG GI GP G +
Sbjct: 387 GPPGEPGLPGI---PGPMGPPGAIGFPGPKGEGGIVGPQGPPGP-------------KGE 430
Query: 530 AGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGA-------GVPGFGAVPGALAAAKAAK 580
GL G PG VG PG+ G+PG +G GVPG VPG L
Sbjct: 431 PGLQGFPGKPGFLGEVGPPGM---RGLPG-PIGPKGEAGQKGVPGLPGVPGLLGPK---- 482
Query: 581 YGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG 640
PG+ G G G GIPG +GP + G G G+G GV G
Sbjct: 483 ---GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAG 539
Query: 641 L----GVPGVGGLGGIP 653
L G PG G G P
Sbjct: 540 LHGPPGKPGALGPQGQP 556
Score = 124 bits (310), Expect = 4e-28
Identities = 163/540 (30%), Positives = 198/540 (36%), Gaps = 109/540 (20%)
Query: 179 GVKPKAPGVGGAFAG-IPGVGPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLP 232
G+KP P + IP P G P +PL A P L G P+ LP
Sbjct: 32 GIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPH----LP 87
Query: 233 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
A GK P P A+ + G PG+ G G+PG+ G
Sbjct: 88 QYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKG 147
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPG 348
PG G GVG P +PG PG PG +G+PGA G G
Sbjct: 148 K-PGPQGYPGVGKPG--------------------MPGMPG-KPGAMGMPGAKGEIGQKG 185
Query: 349 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
+G+PG P P G+PG PG P + K G R G+ G P
Sbjct: 186 EIGPMGIPGPQGPPGPH-GLPGIGKPG--GPGLPGQPGPK----GDRGPKGLPG-PQGLR 237
Query: 405 GAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 464
G G GFG+ G PGV G PG+ G PG G+PGVG PGV
Sbjct: 238 GPKGDKGFGMP--GAPGVKGPPGMHGPPGPVGLPGVG------------------KPGVT 277
Query: 465 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 524
PG G APG G PGV PG+ PGIG G K
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGI---PGIGKPGQDGIPGQPGFPGGKG 334
Query: 525 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-AAKAAKYGA 583
+ G+PGL G+PG+ G PG G G G VPGAL + GA
Sbjct: 335 E--------QGLPGLPGPPGLPGI----GKPGFPGPKGDRGMGGVPGALGPRGEKGPIGA 382
Query: 584 ----------AVPGVLGGLGALGGVGIP-----GGVVG----AGPAAAAAAAKAAAKAAQ 624
+PG+ G +G G +G P GG+VG GP K
Sbjct: 383 PGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF 442
Query: 625 FGLVGAAGLGGL-----GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
G VG G+ GL G G GV GL G+P K + G+ G P PG
Sbjct: 443 LGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPK-GEPGIPGDQGLQGPPGIPG 501
Score = 110 bits (276), Expect = 3e-24
Identities = 139/415 (33%), Positives = 164/415 (39%), Gaps = 76/415 (18%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGG-----GALGPGGKPLKPVPGGLAGAGL 75
P PG G PG G PG V PG G + G G LG G P +P P G G
Sbjct: 248 PGAPGVKGPPGM--HGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPG 305
Query: 76 GAGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVV 134
G P + PG +PG + K GL G+PG GL P PG
Sbjct: 306 VQGPPGIPGIGKPGQDGIPG-----QPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPG--- 357
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGI 194
P+ G+ G VPG P G + GA PG+G PG P G+ P G GA G
Sbjct: 358 PKGDRGM--GGVPGALGPRGEKGPI--GA--PGIGGPPGEPGLPGI-PGPMGPPGAI-GF 409
Query: 195 PG-------VGPFGGPQP-GVP--LGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAA 244
PG VGP G P P G P G+P K P G G P G LP GP G AG
Sbjct: 410 PGPKGEGGIVGPQGPPGPKGEPGLQGFPGK-PGFLGEVGPPGMRG-LPGPIGPKGEAGQK 467
Query: 245 GKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIG 298
G G P G+ GP+ + G G+ G G PG+PG +PG
Sbjct: 468 GVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPP 527
Query: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPGAGI 356
G G+G P A K PG GP PG+ G PG PG P A +
Sbjct: 528 GFPGIGKPGVAGLHGPPGK-----------PGALGPQGQPGLPGPPGP--PGPPGPPAVM 574
Query: 357 PVVP---GAGIP--GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
P P G +P G + GV P A YGA+ G G P Y + A
Sbjct: 575 PPTPPPQGEYLPDMGLGIDGVKPPHA----------YGAKKGKNGG--PAYEMPA 617
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 147 bits (372), Expect = 2e-35
Identities = 232/772 (30%), Positives = 280/772 (36%), Gaps = 145/772 (18%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGA------- 73
P PG G PG + PG L G G GP G P P P G GA
Sbjct: 538 PGPPGRDGSKGMRGEPGELGEPG-----LPGEVGMRGPQGPPGLPGPPGRVGAPGLQGER 592
Query: 74 ---GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPG-VGGLGVSAAPSV 129
G G FPG PG + +G+ G G G +G + P V
Sbjct: 593 GEKGTRGEKGERGLDGFPGK--PGDTGQ-----QGRPGPSGVAGPQGEKGDVGPAGPPGV 645
Query: 130 PGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPK----- 183
PG+VV Q G + G G G PG PGAR P G G P G++ K
Sbjct: 646 PGSVVQQEGLKGEQGAPGPRGHQGA-PGP--PGARGPIGPEGRDGPPGLQGLRGKKGDMG 702
Query: 184 APGVGGAFA-----GIPGV-GPFG-GPQPGVP--LGYPIKAPKLPGGYGLPYTTGK--LP 232
PG+ G G PGV GP G G PG+P +G+P K P PG G P G P
Sbjct: 703 PPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGK-PGPPGPTGPPGKDGPNGPP 761
Query: 233 YGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGV--LPGV------- 282
G G G G+ G P G+ G A + K AG G PGV
Sbjct: 762 GPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQ 821
Query: 283 ---GGAGVPGV-----------PGAIPGIGGIAGVGTPAAAAAAAAAAKAAK-------- 320
G G+PG+ P PG+ G + TP K K
Sbjct: 822 GEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGE 881
Query: 321 ---YGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPG-AGIPG-AAVPGVVS 374
G L P GP PG G GA G PG AG P PG G PG + PG V
Sbjct: 882 PGLQGRPGELGPQGPTGPPGAKGQEGAHGAPG----AAGNPGAPGHVGAPGPSGPPGSVG 937
Query: 375 PEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVG--GVP 432
K + G + G G P VG G P G PG+ G PG G G P
Sbjct: 938 APGLRGTPGKDGERGEKGAAGEEGSPG-PVGPRGDP-------GAPGLPGPPGKGKDGEP 989
Query: 433 GVGGVPGVGISPEAQAAAAAK-------AAKYGLVPGVGVAPGVGVAPGVGVAPGVGLA- 484
G+ G PG+ P AA K A V G APG+ +PG PG+G+A
Sbjct: 990 GLRGSPGLP-GPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAG 1048
Query: 485 -PGVGVAPGVGVAPGVGVAPGI----GPGGVAAAAKSAAK--VAAKAQLRAAAGLG---- 533
PG PG +PG PG GP G A + + K L + G
Sbjct: 1049 PPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINL 1108
Query: 534 ----------------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAK 577
G+PG GVPG G G AG PG PG +A +
Sbjct: 1109 LAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPG-IAGPQ 1167
Query: 578 AAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL---- 633
++ G +G G G G+PG + G A A A G+ G+ G
Sbjct: 1168 GSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPP 1227
Query: 634 GGLGVGGL-GVPGVGGLGGI-----PPAAAAKAAKYGVAARPGFGLSPIFPG 679
G G GL G+PG G G PP KA + G+ G P F G
Sbjct: 1228 GPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKG 1279
Score = 132 bits (332), Expect = 1e-30
Identities = 197/648 (30%), Positives = 232/648 (35%), Gaps = 82/648 (12%)
Query: 59 GGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPG---GVADAAAAYKAAKAGAGLGGV 115
G K V G + G +GA V PG G+ K K GL G
Sbjct: 481 GEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGP 540
Query: 116 PGVGGL-------GVSAAPSVPGAV---VPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGA 163
PG G G P +PG V PQ PG PG+V GL G G
Sbjct: 541 PGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGE 600
Query: 164 RFP-GVGVLPGVP--TGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPG 220
+ G+ PG P TG +P GV G VGP G PGVP G ++ L G
Sbjct: 601 KGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAG--PPGVP-GSVVQQEGLKG 657
Query: 221 GYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLP 280
G P G G G GA G G P G GP K G G+L
Sbjct: 658 EQGAPGPRGH----QGAPGPPGARGPIG-PEGRD-GPPGLQGLRGKKGDMGPPGIPGLLG 711
Query: 281 GVGGAGVPGVPGAIPGIGGIAG----VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGP 336
G G PGVPG PG GG G +G P K G P GP P
Sbjct: 712 LQGPPGPPGVPGP-PGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDG------PNGPPGPP 764
Query: 337 GVVGVPGA----GVPG-------VGVPG-AGIPVVPG-AGIPGA-AVPGVVSPEAAAKAA 382
G G PG G+PG +G G AG P G AG+PGA PGV +
Sbjct: 765 GTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEK 824
Query: 383 AKAAKYGARPGVGVGGIPTYGVGAGGFPGFG---------VGVGGIPGVAGVPGVGGVPG 433
+ G + G G G G PG G G G G PG+ G PG
Sbjct: 825 GELGLPGLKGDRGEKG-EAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPG 883
Query: 434 VGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGV 493
+ G PG + P+ + G APG PG APG APG PG
Sbjct: 884 LQGRPG-ELGPQGPTGPPGAKGQ----EGAHGAPGAAGNPG---APGHVGAPGPSGPPGS 935
Query: 494 GVAPGVGVAPG----IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG 549
APG+ PG G G A S V + A GL G PG G G PGL
Sbjct: 936 VGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGD-PGAPGL-PGPPGKGKD-GEPGLR 992
Query: 550 VGAGVPG-LGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG--GVGIPGGVVG 606
G+PG LG A + K PG+ G G+ G G+G+ G
Sbjct: 993 GSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGP 1052
Query: 607 AGPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGI 652
+GP + + G G AG G G G PG GL +
Sbjct: 1053 SGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSL 1100
Score = 116 bits (290), Expect = 8e-26
Identities = 216/734 (29%), Positives = 247/734 (33%), Gaps = 114/734 (15%)
Query: 22 HPSRPGGVPGAIPGGVPGGVFYPGA-GLGALGG-----GALGPGGKPLKPVPGGLAGA-G 74
+P PG V P G PG V PG G G GA G G P P G GA G
Sbjct: 917 NPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPG 976
Query: 75 L----GAGLGAFPAVT-FPGALVPGGVADAAAAYKA-AKAGAGLGGVPGVGGLGVSAAPS 128
L G G P + PG +PG + AA K LGG G G P
Sbjct: 977 LPGPPGKGKDGEPGLRGSPG--LPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPG 1034
Query: 129 VPGAVVPQPGAGVK--PGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPG 186
PG+ PG GV PG G G LPG FPG P P G P PG
Sbjct: 1035 SPGSR-GDPGIGVAGPPGPSGPPGDKGSPGSRGLPG--FPG----PQGPAGRDGAPGNPG 1087
Query: 187 VGGAFAGIPGVGPFGGPQP----------GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYG 236
G G PG+ P P G P P LPG G GK P G
Sbjct: 1088 ERGP-PGKPGLSSLLSPGDINLLAKDVCNDCPPGPP-GLPGLPGFKGDKGVPGK-PGREG 1144
Query: 237 PGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGG-AGVPGVPGAIP 295
G G AG G P G+ + A + G PGV G G PG PG P
Sbjct: 1145 TEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGP-P 1203
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL--VPG-----------GPGFGPGVVGVP 342
G GIAG P + +GL +PG GP PG G P
Sbjct: 1204 GADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEP 1263
Query: 343 GA-------GVPGV-------GVPG----AGIPVVPGA-GIPG----AAVPGVVSPEAAA 379
G G PG G PG +G +PG G+PG G P+
Sbjct: 1264 GLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPR 1323
Query: 380 KAAAKAAKYGARPGVGVGGIPTYGVGAG-----GFPGF--GVGVGGIPGVAGVPGVGGVP 432
K G+ G G P G G PGF G G PG GVPG GVP
Sbjct: 1324 GPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVP 1383
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYGL-VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAP 491
G G PG K G PG PG G+ G+ G P
Sbjct: 1384 GKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPP 1443
Query: 492 GVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLG-------------AGIPG 538
G PG G P ++ + + R A L G PG
Sbjct: 1444 GPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPG 1503
Query: 539 LGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGV 598
G+PG G PG G+ G + P + AK PGV G G +G
Sbjct: 1504 PPGKDGLPGRAGPMGEPGRPGQGGLEG-PSGPIGPKGERGAKGDPGAPGV-GLRGEMGPP 1561
Query: 599 GIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAA 658
GIPG G A+ GL G G G G G PG+ G G P
Sbjct: 1562 GIPGQPGEPG-------------YAKDGLPGIPGPQG-ETGPAGHPGLPGPPGPPGQCDP 1607
Query: 659 KAAKY--GVAARPG 670
Y +AARPG
Sbjct: 1608 SQCAYFASLAARPG 1621
Score = 114 bits (284), Expect = 4e-25
Identities = 190/609 (31%), Positives = 221/609 (36%), Gaps = 104/609 (17%)
Query: 110 AGLGGVPGVGG-LGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGV 168
AG G GV G +G+ GA+ P G K K G G+ P G +
Sbjct: 480 AGEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEK----GDVGIGPFGQGEKGEKGSL 535
Query: 169 GVLPGVPTGAGVKPKA--PGVGGAFAGIPGVGPFGGPQ--PGVPLGYP--IKAPKLPGGY 222
G LPG P G K PG G G+PG GPQ PG+P G P + AP L G
Sbjct: 536 G-LPGPPGRDGSKGMRGEPGELGE-PGLPGEVGMRGPQGPPGLP-GPPGRVGAPGLQGER 592
Query: 223 GLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGV 282
G T G+ G G+ G GK G TG P + A G G V
Sbjct: 593 GEKGTRGEK----GERGLDGFPGKPG-DTGQQGRPGPSGVA----------GPQGEKGDV 637
Query: 283 GGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGV 341
G AG PGVPG++ G+ G G P A GA + P G PG+ G+
Sbjct: 638 GPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPP---GARGPIGPEGRDGPPGLQGL 694
Query: 342 PGA----GVPGVGVPGA-GIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 395
G G PG+ PG G+ PG G+PG PG G
Sbjct: 695 RGKKGDMGPPGI--PGLLGLQGPPGPPGVPGPPGPG-----------------------G 729
Query: 396 VGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAA 455
G+P G GFPG G PG G PG G G G PG P +
Sbjct: 730 SPGLP----GEIGFPG----KPGPPGPTGPPGKDGPNGPPGPPGTKGEP-GERGEDGLPG 780
Query: 456 KYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGV-GVAPGVGVAPGIGPGGVAA-- 512
K GL +G G+ PG G+ APG PGV G G +G G+
Sbjct: 781 KPGLRGEIG-EQGLAGRPGEKGEAGLPGAPGF---PGVRGEKGDQGEKGELGLPGLKGDR 836
Query: 513 AAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGA 572
K A A L L P + G G G PGL G PG PG
Sbjct: 837 GEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKG---EKGDPGL---PGEPGLQGRPGE 890
Query: 573 LA--------AAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQ 624
L AK + PG G GA G VG PG G A K +
Sbjct: 891 LGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGE 950
Query: 625 FGLVGAAGLGGLG--VGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPGGAC 682
G GAAG G VG G PG GL G PP G PG SP PG
Sbjct: 951 RGEKGAAGEEGSPGPVGPRGDPGAPGLPG-PPGK-------GKDGEPGLRGSPGLPGPLG 1002
Query: 683 LGKACGRKR 691
ACG+ R
Sbjct: 1003 TKAACGKVR 1011
Score = 111 bits (278), Expect = 2e-24
Identities = 189/653 (28%), Positives = 229/653 (35%), Gaps = 109/653 (16%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGK-----------PLKPVPGGLAGAGLG 76
G PG IPG PG PG G+ G + PG K P P G GA
Sbjct: 1028 GAPG-IPGS-PGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGN 1085
Query: 77 AGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAVVP 135
G P +L+ G + A G G+PG+ G G P PG
Sbjct: 1086 PGERGPPGKPGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPG---- 1141
Query: 136 QPGAGVKPGKVPGVGLPGVYPGGVLP----GAR-------------FPGVGVLPGVPTGA 178
+ G K G+ GLPG PG P G R PGV G P
Sbjct: 1142 REGTEGKKGEAGPPGLPGP-PGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNP 1200
Query: 179 GVKPKAPGVGGAFAGIPGV----GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYG 234
G P A G+ GA AG PG+ G G P P P G P +PG G GK
Sbjct: 1201 G-PPGADGIAGA-AGPPGIQGSPGKEGPPGPQGPSGLP----GIPGEEGKEGRDGKP--- 1251
Query: 235 YGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAI 294
GP G G AG+ G P GP+ A +GA G G G+PG G +
Sbjct: 1252 -GPPGEPGKAGEPGLP-----GPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEG-L 1304
Query: 295 PGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA---------- 344
PG G G P K G+ PG PG PG G PG
Sbjct: 1305 PGKDGDTGPTGPQGPQGPRGPP--GKNGS-----PGSPG-EPGPSGTPGQKGSKGENGSP 1356
Query: 345 GVPGV----GVPGA-GIPVVPGA-GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVG 397
G+PG G PG G VPG G+PG PG G + G
Sbjct: 1357 GLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDP 1416
Query: 398 GIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEAQAAAAAKAAK 456
GIP G G G +G G+PG G G G PG G PG+ G SP + +
Sbjct: 1417 GIP----GHKGHTGL-MGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEE 1471
Query: 457 YGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAK 515
G +A + P + G PG PG PG G G G
Sbjct: 1472 LGKQLETRLAYLLAQMPPAYMKSSQG-RPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEG 1530
Query: 516 SAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAA 575
+ + K + A GA GL +G PG+ G PG G+PG
Sbjct: 1531 PSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKD-GLPG---------- 1579
Query: 576 AKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLV 628
+PG G G G G+PG G + A A+ AA+ G V
Sbjct: 1580 ---------IPGPQGETGPAGHPGLPGPPGPPGQCDPSQCAYFASLAARPGNV 1623
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 146 bits (368), Expect = 7e-35
Identities = 170/541 (31%), Positives = 204/541 (37%), Gaps = 55/541 (10%)
Query: 117 GVGGLGVSAAPSVPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGV 174
G+ G P PG P+ PG PGK PG PG+ PG+
Sbjct: 52 GIAVRGEQGTPGPPGPAGPRGHPGPSGPPGK---------------PGYGSPGLQGEPGL 96
Query: 175 PTGAGVKPKAPGVGGAFAGIPGV----GPFGGPQPGVPLGYPIKAPK-LPGGYGLPYTTG 229
P G P A G G G+PG GP+G P G P P+ PG G+P G
Sbjct: 97 PGPPG--PSAVGKPGV-PGLPGKPGERGPYGPKGDVGPAGLP--GPRGPPGPPGIPGPAG 151
Query: 230 -KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 288
+P G G GA G G+P G P K +GA G+ G P
Sbjct: 152 ISVPGKPGQQGPTGAPGPRGFPGEKG-APGVPGMNGQKGEMGYGAPGRPGERGLPGPQGP 210
Query: 289 GVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPG 348
P PG+G G P + G + P GP PG G G G PG
Sbjct: 211 TGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGP---IGPPGPQGPPGERGPEGIGKPG 267
Query: 349 -VGVPGAGIPVVPGA-GIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
G PG P +PG G+PGA PG+ P K G + G G+P G GA
Sbjct: 268 AAGAPGQ--PGIPGTKGLPGA--PGIAGP-PGPPGFGKPGLPGLKGERGPAGLPG-GPGA 321
Query: 407 GGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGV-GISPEAQAAAAAKAAKYGLVPGVGV 465
G G G+ G PG+ G PG G G G+PG G+ A A Y G
Sbjct: 322 KGEQG-PAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERG 380
Query: 466 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKA 524
+PG PG PG+ G PG PGVG PG+ GP G A AK +A
Sbjct: 381 SPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVG-PAGAKGMPGHNGEA 439
Query: 525 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG-ALAAAKAAKYGA 583
R A GIPG +G P G+PG G PG PG A A K
Sbjct: 440 GPRGA----PGIPGTRGPIGPP------GIPGFPGSKGDPGSPGPPGPAGIATKGLNGPT 489
Query: 584 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGV 643
PG G G G G+PG GP A + KA Q + L G G+
Sbjct: 490 GPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGM 549
Query: 644 P 644
P
Sbjct: 550 P 550
Score = 124 bits (310), Expect = 4e-28
Identities = 164/533 (30%), Positives = 188/533 (35%), Gaps = 101/533 (18%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGL-------GALGGGALG-PG--GKPLKPVPGGLAG 72
P+ P G PG P G PG Y GL G G A+G PG G P KP G G
Sbjct: 67 PAGPRGHPG--PSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYG 124
Query: 73 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGA-GLGGVPGVGGL-GVSAAPSVP 130
G P P P G+ A K G G G PG G G AP VP
Sbjct: 125 PKGDVGPAGLPGPRGPPG--PPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVP 182
Query: 131 GAVVPQPGAGV-KPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG 189
G + G PG+ GLPG P G + PGVG G P PG+ G
Sbjct: 183 GMNGQKGEMGYGAPGRPGERGLPG--PQGPTGPSGPPGVG-----KRGENGVPGQPGIKG 235
Query: 190 AFAGIPG-VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G PG +GP G P P P PG G P G G G AGA G+ G
Sbjct: 236 D-RGFPGEMGPIGPPGPQGP----------PGERG--------PEGIGKPGAAGAPGQPG 276
Query: 249 YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAA 308
P G+ P A A PG G G+PG+ G G G G
Sbjct: 277 IPGTKGL-PGAPGIAGPPGP-----------PGFGKPGLPGLKGERGPAGLPGGPGAKGE 324
Query: 309 AAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----------AGVPGV----GVPGA 354
A K G + P GP PG G+PG AG PG G PG+
Sbjct: 325 QGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGS 384
Query: 355 ----GIPVVPG-------AGIPG-------AAVPGVVSPEAAAKAAAKAAKYGARPGVGV 396
G P PG G+PG PG+ P A A G G
Sbjct: 385 DGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGA 444
Query: 397 GGIP-TYG-VGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKA 454
GIP T G +G G PGF PG G PG G PG G+ G++
Sbjct: 445 PGIPGTRGPIGPPGIPGF-------PGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGP 497
Query: 455 AKYGLVPGVGVAPGVGVAPGVGVAP----GVGLAPGVGVAPGVGVAPGVGVAP 503
+ PG+ PG PG V P G P + P V GV P
Sbjct: 498 RGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMP 550
Score = 111 bits (277), Expect = 3e-24
Identities = 148/482 (30%), Positives = 176/482 (36%), Gaps = 86/482 (17%)
Query: 198 GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGY----GPGGVAGAAGKAGYPTGT 253
G F + +P G P + +PYT G G G AG G+P
Sbjct: 18 GVFYAERYQMPTGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHP--- 74
Query: 254 GVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAA 313
GP +G G PG G G+ G PG +PG G + VG P
Sbjct: 75 --GP---------------SGPPGK-PGYGSPGLQGEPG-LPGPPGPSAVGKPGVPGLPG 115
Query: 314 AAAKAAKYGAAAGLVPGG---PGFGPGVVGVPG-AGVPGVGVPGAGIPV-VPGA-GIPGA 367
+ YG + P G P PG G+PG AG+ G PG P PG G PG
Sbjct: 116 KPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGE 175
Query: 368 -AVPGVVSPEAAAKAAAKAAKYGA--RPGV-GVGGIPTYGVGAGGFPGFGV-GVGGIPGV 422
PGV YGA RPG G+ G P G G PG G G G+PG
Sbjct: 176 KGAPGVPGMNGQKGEMG----YGAPGRPGERGLPG-PQGPTGPSGPPGVGKRGENGVPGQ 230
Query: 423 AGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVG 482
G+ G G PG G G P Q + + G+G PG APG PG
Sbjct: 231 PGIKGDRGFPGEMGPIG---PPGPQGPPGERGPE-----GIG-KPGAAGAPGQPGIPGTK 281
Query: 483 LAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVG 542
PG APG+ PG PG G G+ L+ G AG+PG G
Sbjct: 282 GLPG---APGIAGPPG---PPGFGKPGLPG-------------LKGERG-PAGLPG---G 318
Query: 543 VGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA--AAKAAKYGAAVPGVLGGLGALGGVGI 600
G G AG+PG PG PG + K +PG G G G G
Sbjct: 319 PGAKGEQGPAGLPGK------PGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGY 372
Query: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKA 660
PG G + K GL G G GL G G PGVGG G+P
Sbjct: 373 PGAKGERGSPGSDGKPGYPGKP---GLDGPKGNPGLP-GPKGDPGVGGPPGLPGPVGPAG 428
Query: 661 AK 662
AK
Sbjct: 429 AK 430
Score = 70.1 bits (170), Expect = 7e-12
Identities = 93/301 (30%), Positives = 110/301 (36%), Gaps = 67/301 (22%)
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
G G PG G G G PG G PG YG PG+ PG+ PG
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPG--------------KPGYG-SPGLQGEPGLPGPPG 101
Query: 475 VGVA--PGVGLAPG-------------VGVA--PGVGVAPGVGVAPGI-GPGGVAAAAKS 516
PGV PG VG A PG PG PGI GP G++ K
Sbjct: 102 PSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPG---PPGIPGPAGISVPGKP 158
Query: 517 AAK--VAAKAQLRAAAGLGA-GIPGLG-----VGVGVPGLGVGAGVPGL--------GVG 560
+ A GA G+PG+ +G G PG G+PG G
Sbjct: 159 GQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPG 218
Query: 561 AGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGAGPAAAAAAAKA 618
G G VPG K PG +G +G G G PG G G G AA A
Sbjct: 219 VGKRGENGVPG----QPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQ 274
Query: 619 AAKAAQFGLVGAAGLGG-LGVGGLGVPGVGGL------GGIP--PAAAAKAAKYGVAARP 669
GL GA G+ G G G G PG+ GL G+P P A + G+ +P
Sbjct: 275 PGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKP 334
Query: 670 G 670
G
Sbjct: 335 G 335
Score = 48.5 bits (114), Expect = 2e-05
Identities = 66/226 (29%), Positives = 77/226 (34%), Gaps = 45/226 (19%)
Query: 460 VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGI-GPGGVAAAAKSAA 518
V G PG G PG PG PG G +PG+ PG+ GP G +A K
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPG---KPGYG-SPGLQGEPGLPGPPGPSAVGKPGV 110
Query: 519 KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKA 578
G+PG G G G GL G PG +PG +
Sbjct: 111 P---------------GLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVP 155
Query: 579 AKYGAAVPGVLGGLGALGGVGIPG-----GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 633
K PG G GA G G PG GV G A + + GL G G
Sbjct: 156 GK-----PGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQG- 209
Query: 634 GGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
G G PGVG K + GV +PG FPG
Sbjct: 210 ---PTGPSGPPGVG-----------KRGENGVPGQPGIKGDRGFPG 241
>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
Length = 1714
Score = 145 bits (367), Expect = 9e-35
Identities = 204/702 (29%), Positives = 256/702 (36%), Gaps = 102/702 (14%)
Query: 23 PSRPGGVPGAI----PGGVPGGVFYPGA-GLGALGGGALGPGGKPLKPVPGGLAGAGLGA 77
P P G+PG P G+PG PG GL G PG P +PVPG GL
Sbjct: 499 PPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSG 558
Query: 78 -----------GLGAFPAVT-FPGAL-VPGGVAD-AAAAYKAAKAGAGLGGVPG-VGGLG 122
GL P + PG +PG + + Y + AG G PG G G
Sbjct: 559 LMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQG 618
Query: 123 VSAAPSVPGAVVPQ-----PGAGVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPT 176
+P G + P+ PG K G G PG + G R P G+ PG+
Sbjct: 619 FIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDF------GDRGPAGLDGSPGLVG 672
Query: 177 GAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYG 236
G G P PG+ G+ + +GP G P P+G L G GLP G G
Sbjct: 673 GTG-PPGFPGLRGSVGPVGPIGPAGIPG---PMG-------LSGNKGLPGIKG----DKG 717
Query: 237 PGGVAGAAGKAGYPTGTG-VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--A 293
G AG G+ GYP G VG K+ G G+ G G G PG
Sbjct: 718 EQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIG 777
Query: 294 IPGIGGIAGV-------GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AG 345
IPG G G G P + GA L P G G G PG G
Sbjct: 778 IPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEG 837
Query: 346 VPG-VGVPG--AGIPVVPGAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
+ G VG G I G+PG + G + + + G + +G G P
Sbjct: 838 LKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPG 897
Query: 402 Y--GVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPG-VGI-SPEAQAAAAAKAAKY 457
+G G PG VG G PG G G G G G+ G GI + + K +
Sbjct: 898 VPGPIGPLGLPGH-VGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPH 956
Query: 458 GLVPGVG--VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPG----IGPGGVA 511
GL+ G G PG+ PG G+ PG+ G PG GP G
Sbjct: 957 GLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTE 1016
Query: 512 AAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG 571
+ + AK + A +G G G PGL G PG G G VPG
Sbjct: 1017 GESGLQGEPGAKGDVGTAGSVG--------GTGEPGLRGEPGAPGEEGLQGKDGLKGVPG 1068
Query: 572 --ALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVG----------------AGPAA 611
L K +PG++G LG G G+PG G+VG GP
Sbjct: 1069 GRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTG 1128
Query: 612 AAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 653
+ K + G GA G G VG LG+ G G GIP
Sbjct: 1129 EVGSRGPPGKIGKSGPKGARGTRG-AVGHLGLMGPDGEPGIP 1169
Score = 114 bits (285), Expect = 3e-25
Identities = 222/816 (27%), Positives = 277/816 (33%), Gaps = 193/816 (23%)
Query: 22 HPSRPGGVPG--AIPG--GVPGGVFYPGAGLGALGGGALGPGGKP-LKPVPGGLAGAGLG 76
HP PG +PG IPG G G YPG G GP G P K G + G
Sbjct: 574 HPGLPG-LPGEQGIPGFAGNIGSPGYPGRQ------GLAGPEGNPGPKGAQGFIGSPGEA 626
Query: 77 AGLGAFPAVTFPGAL----------VPGGVADAAAAYKAAKAGAGLGGVPG-VGGLGVSA 125
LG PG PG D + AGL G PG VGG G
Sbjct: 627 GQLGPEGERGIPGIRGKKGFKGRQGFPGDFGD--------RGPAGLDGSPGLVGGTGPPG 678
Query: 126 APSVPGAVVPQPGAGVKPGKVPGV-------GLPGVY-------PGGVLPGARFPGVGVL 171
P + G+V P G P +PG GLPG+ G L +PG
Sbjct: 679 FPGLRGSVGPVGPIG--PAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGA 736
Query: 172 PGVPTGAGVKPKAPGVGGAFAGIPGV-GPFGGPQP-------GVPLGYPIKAPK------ 217
G+P G++ K+ G G PG+ GP G P P G+P + PK
Sbjct: 737 VGLPGPPGMRGKSGPSGQT--GDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR 794
Query: 218 -LPGGYGLPYTTGKL-PYG----YGPGGVAGAAGKAGYPTGTG----------------- 254
PG GL T G+ P G GP G G G AG P G
Sbjct: 795 GPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGET 854
Query: 255 --VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAG-VGTPAAAAA 311
VG K G+ G L G GV G PG PG+ G G +G P A
Sbjct: 855 GPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGP-PGVPGPIGPLGLPGHVGA 913
Query: 312 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-------------------------GV 346
G P G G+ G G G
Sbjct: 914 RGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGK 973
Query: 347 PGV-GVPGA----GIPVVPGA-GIPGAAVP----GVVSPEAAAKAAAKAAKYGARPGVGV 396
PG+ G+PG+ G+P PG G+ G P G+ P + + GA+ VG
Sbjct: 974 PGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGT 1033
Query: 397 GGIPTYGVGAGGFPGF----------GV----GVGGIPGVAGVPGVGGVPGVGGVPGVGI 442
G VG G PG G+ G+ G+PG G+PG G G G+PG+ I
Sbjct: 1034 AG----SVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGI-I 1088
Query: 443 SPEAQAAAAAKAAKYGLV--PGVGVAPG-------VGVAPGVGVA--PG-VGLAPGVGVA 490
P ++ G+V PG PG +G VG PG +G + G
Sbjct: 1089 GPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGAR 1148
Query: 491 PGVGVAPGVGVA-----PGI----------------GPGGVAAAAKSAAKVAAKAQLRAA 529
G +G+ PGI GP G + V R
Sbjct: 1149 GTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGE 1208
Query: 530 AG-LG-------AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAA----- 576
G +G G G VGVPGL G G G G + G +
Sbjct: 1209 PGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGK 1268
Query: 577 KAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGL 636
K A + PG+ G G LG GI G G + K G+ G G GL
Sbjct: 1269 KGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGL 1328
Query: 637 GVGGLGVPGVGGLGGIP--PAAAAKAAKYGVAARPG 670
G G PGV G G+P P + G+ +PG
Sbjct: 1329 A-GAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPG 1363
Score = 104 bits (259), Expect = 3e-22
Identities = 194/668 (29%), Positives = 233/668 (34%), Gaps = 126/668 (18%)
Query: 26 PGGVPGAI-PGGVPG-----------------GVFYPGAGLGALG-GGALGPGGKPLKPV 66
P GVPG I P G+PG G P LG G GA G G K
Sbjct: 895 PPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRG 954
Query: 67 PGGLAGAGLGAGLGAFPAVTFPGAL-VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSA 125
P GL G G F PG +PG D + G G V G +G+
Sbjct: 955 PHGLIGKTGNPGERGFQGK--PGLQGLPGSTGDRGLPGEPGLRGLQ-GDVGPPGEMGMEG 1011
Query: 126 APSVPGAVVPQPGAGVK-----PGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGVPTGAG 179
P G Q G K G V G G PG+ PG G L GVP G G
Sbjct: 1012 PPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRG 1071
Query: 180 VKPKAPGVGGAFAGIPGV-GPFG-GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
+ P G G G+PG+ GP G Q G+P P +PG G P
Sbjct: 1072 L-PGEDGEKGEM-GLPGIIGPLGRSGQTGLP--GPEGIVGIPGQRGRP------------ 1115
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G G+ G PTG VG + K+ K G G + +G G G PG IPG
Sbjct: 1116 -GKKGDKGQIG-PTGE-VGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPG-IPGY 1171
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGV-GVPG-A 354
G G P+ K + L P GP PG VG G G PG G G
Sbjct: 1172 RGHQGQPGPSGLPGPKGE-KGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHV 1230
Query: 355 GIPVVPGA----GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYG--VGAG 407
G+P + GA G PG G + + K GA G GIP +G
Sbjct: 1231 GVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPK 1290
Query: 408 GFPGF--GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGV 465
G G+ G+ G PG G PG G+PG+ G PG
Sbjct: 1291 GIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPG-------------------------- 1324
Query: 466 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 525
G+ APG PGV + G+ +PG+ G PG PG + K
Sbjct: 1325 RTGLAGAPG---PPGVKGSSGLPGSPGIQGPKGEQGLPG-QPG-----------IQGKRG 1369
Query: 526 LRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 585
R A G G PGL G PG G+ GF PG K + A +
Sbjct: 1370 HRGAQGDQG-------PCGDPGL---KGQPGEYGVQGLTGFQGFPG----PKGPEGDAGI 1415
Query: 586 PGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPG 645
G+ G G +G G GP + G G G G G G PG
Sbjct: 1416 VGISGPKGPIGHRG------NTGPLGREGIIGPTGRTGPRGEKGFRGETG-PQGPRGQPG 1468
Query: 646 VGGLGGIP 653
G G P
Sbjct: 1469 PPGPPGAP 1476
Score = 78.2 bits (191), Expect = 2e-14
Identities = 130/447 (29%), Positives = 163/447 (36%), Gaps = 61/447 (13%)
Query: 28 GVPGAI-PGGVPGGVFYPGA-GLGALGG-----------GALGPGGKP-LKPVPGGLAGA 73
G+PG I P G G PG G+ + G G +GP G+ + PG + +
Sbjct: 1083 GLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKS 1142
Query: 74 GLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAV 133
G G AV G + P G Y+ + G G+PG G P V
Sbjct: 1143 GPKGARGTRGAVGHLGLMGPDG-EPGIPGYRGHQGQPGPSGLPGPKG--EKGYPGEDSTV 1199
Query: 134 VPQPGAGVKPGKVPGVGLPGVYPGGVLPGAR-FPGVGVLPGV--PTGAGVKPKAPGVGGA 190
+ PG +PG V G G PGA + G +PG+ TG P PG G
Sbjct: 1200 LGPPGPRGEPGPVGDQGERGE------PGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGE 1253
Query: 191 FAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYP 250
G+ G G + P P +PG GL G Y +G G++G GK G P
Sbjct: 1254 -QGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGY-HGADGISGNPGKIGPP 1311
Query: 251 TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGV-GGAGVPGVPGAIPGIGGIAGV-GTPAA 308
G Q AGA G PGV G +G+PG PG I G G G+ G P
Sbjct: 1312 -----GKQGLPGIRGGPGRTGLAGAPGP-PGVKGSSGLPGSPG-IQGPKGEQGLPGQPGI 1364
Query: 309 AAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGAGIPVVPGAGIP-- 365
K G GP PG+ G PG GV G+ G PG P
Sbjct: 1365 QG---------KRGHRGAQGDQGPCGDPGLKGQPGEYGVQGL----TGFQGFPGPKGPEG 1411
Query: 366 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
A + G+ P+ G +G PT G G GF G G G
Sbjct: 1412 DAGIVGISGPKGPIGHRGNTGPLGREGIIG----PTGRTGPRGEKGFR----GETGPQGP 1463
Query: 426 PGVGGVPGVGGVPGVGISPEAQAAAAA 452
G G PG G PG + AA A
Sbjct: 1464 RGQPGPPGPPGAPGPRKQMDINAAIQA 1490
Score = 76.6 bits (187), Expect = 7e-14
Identities = 123/477 (25%), Positives = 170/477 (35%), Gaps = 77/477 (16%)
Query: 230 KLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPG 289
++ Y GP G G G G P G GP G G+ G G+PG
Sbjct: 483 EMEYLRGPKGDTGPPGPPG-PAGIP-GPSGKR------------GPRGIPGPHGNPGLPG 528
Query: 290 VPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPG 348
+PG G P + + G + + P G G+ G PG G+PG
Sbjct: 529 LPGP------KGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPG 582
Query: 349 -VGVPG----AGIPVVPG-------------------AGIPGAA----------VPGVVS 374
G+PG G P PG G PG A +PG+
Sbjct: 583 EQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRG 642
Query: 375 PEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPGF--GVGVGGIPGVAGVPGVGG 430
+ +G R G+ G P G G GFPG VG G G AG+PG G
Sbjct: 643 KKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMG 702
Query: 431 VPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVA 490
+ G G+PG+ + + A + + G PG A G+ PG+ G G
Sbjct: 703 LSGNKGLPGIK-GDKGEQGTAGELGEPG-YPGDKGAVGLPGPPGMRGKSGPSGQTGDPGL 760
Query: 491 PGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGV 550
G PG P PG + ++ + K L G PGL G G
Sbjct: 761 QGPSGPPG----PEGFPGDIGIPGQNGPE-GPKGLLGNRG--PPGPPGLKGTQGEEGPIG 813
Query: 551 GAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG--GVVGA- 607
G G G G+ PG + K G +G +G G VG+PG G+ G+
Sbjct: 814 AFGELGPRGKPGQKGYAGEPG----PEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSI 869
Query: 608 GPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGGLGVPGVGGLGGIPPAAAAKAAK 662
G + + G++G G G+ +G LG+PG G G P + K +
Sbjct: 870 GEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQR 926
Score = 67.0 bits (162), Expect = 6e-11
Identities = 81/278 (29%), Positives = 99/278 (35%), Gaps = 25/278 (8%)
Query: 410 PGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAK--YGLVPGVGV-- 465
P G G PG AG+PG G G G+PG +P K K G PG V
Sbjct: 490 PKGDTGPPGPPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPG 549
Query: 466 ------APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAK 519
G+ PG+ G+ PG+ PG P G A IG G A
Sbjct: 550 EKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIP--GFAGNIGSPGYPGRQGLAGP 607
Query: 520 VAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAA 579
A +G+ PG +G G G+PG+ G G PG A
Sbjct: 608 EGNPGPKGAQGFIGS--PGEAGQLGPEG---ERGIPGIRGKKGFKGRQGFPGDFGDRGPA 662
Query: 580 KYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG-LGGLGV 638
+ PG++GG G G G+ G V GP A + GL G G G G
Sbjct: 663 GLDGS-PGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGT 721
Query: 639 GG-LGVPGVGGLGGI-----PPAAAAKAAKYGVAARPG 670
G LG PG G G PP K+ G PG
Sbjct: 722 AGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPG 759
Score = 60.5 bits (145), Expect = 5e-09
Identities = 93/343 (27%), Positives = 112/343 (32%), Gaps = 76/343 (22%)
Query: 19 SILHPSRPGGVPGAIPG----GVPGGVFYPG-AGLGALGG--GALGPGGKPLKPVPGGLA 71
++L P P G PG + G PG Y G G+ L G G GP G+P GL
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLK 1257
Query: 72 GAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPG 131
G G K K G G PG+ GL P
Sbjct: 1258 GERGSEG------------------------NKGKKGAPGPSGKPGIPGLQGLLGPKGIQ 1293
Query: 132 AVVPQPGAGVKPGKV--PGV-GLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVG 188
G PGK+ PG GLPG+ G PG TG P PGV
Sbjct: 1294 GYHGADGISGNPGKIGPPGKQGLPGIRGG---PGR------------TGLAGAPGPPGVK 1338
Query: 189 GAFAGIPGVGPFGGP--QPGVPLGYPIKAPKLPGGYGLPYTTGKLPY--GYGPGGVAGAA 244
G+ +G+PG GP + G+P G P GK + G G G
Sbjct: 1339 GS-SGLPGSPGIQGPKGEQGLP--------------GQPGIQGKRGHRGAQGDQGPCGDP 1383
Query: 245 GKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVG 304
G G P GV Q K G AG++ G+ G G I G +G
Sbjct: 1384 GLKGQPGEYGV--QGLTGFQGFPGPKGPEGDAGIV------GISGPKGPIGHRGNTGPLG 1435
Query: 305 TPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVP 347
+ G P GP PG G PGA P
Sbjct: 1436 REGIIGPTGRTGPRGEKGFRGETGPQGPRGQPGPPGPPGAPGP 1478
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 144 bits (364), Expect = 2e-34
Identities = 217/688 (31%), Positives = 260/688 (37%), Gaps = 105/688 (15%)
Query: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLG 80
+P PG A P G PG + P G +GG G GP G P P G G +GL
Sbjct: 2151 NPGLPGERGMAGPEGKPG-LQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGP---SGLK 2206
Query: 81 AFPAVTFPGALVPG-GVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPSVPGAV--VPQ 136
P T P PG G+ A GL G PG GL G +P +PG V +
Sbjct: 2207 GEPGETGP----PGRGLTGPTGA-------VGLPGPPGPSGLVGPQGSPGLPGQVGETGK 2255
Query: 137 PGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG-AFAGIP 195
PGA PG+ G G +PG+ PG LPG P G +P G G A G+P
Sbjct: 2256 PGA---PGRDGASGKDGDRGSPGVPGS--PG---LPG-PVGPKGEPGPTGAPGQAVVGLP 2306
Query: 196 GVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV 255
G G PG G + P G GLP GP G G AG+AG P G
Sbjct: 2307 GAKGEKGA-PGGLAGDLVGEPGAKGDRGLP----------GPRGEKGEAGRAGEPGDPGE 2355
Query: 256 GPQAAAAAAAKAAAKFGAGAAGVL-----PGV-GGAGVPGVPGAIPGIGGIAG------- 302
Q A G G G PGV G G+PG+PGA PG+ G G
Sbjct: 2356 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGA-PGVVGFPGQTGPRGE 2414
Query: 303 VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-------GVPGVGVPGA- 354
+G P + A + G L P GP PG VG PGA G PGVG+PG
Sbjct: 2415 MGQPGPSGERGLAGPPGREGIPGPLGPPGP---PGSVGPPGASGLKGDKGDPGVGLPGPR 2471
Query: 355 ---GIPVVPGA-GIPGAAVP-GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGF 409
G P + G G PG P G+ P + + G+ G G +G G
Sbjct: 2472 GERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPG- 2530
Query: 410 PGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGV 469
P G G G G+ G G G G PG + GL PG+ G
Sbjct: 2531 PRGAKGDMGERGPRGLDGDKGPRGDNGDPG----DKGSKGEPGDKGSAGL-PGLRGLLGP 2585
Query: 470 GVAPGVGVAPGVGLAPGVGVAPGV-GVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRA 528
PG PG +PG PG+ G VG +GP G+ + ++
Sbjct: 2586 QGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGF---MGPRGLKG----------ERGVKG 2632
Query: 529 AAGLGA--GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG--ALAAAKAAKYGAA 584
A GL G G G PGL AG G GVPG PG L K +
Sbjct: 2633 ACGLDGEKGDKGEAGPPGRPGL---AGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDG 2689
Query: 585 VPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVP 644
PG G G G G PG GP+ +A G G GL G G G P
Sbjct: 2690 QPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQG-QKGERGPP 2748
Query: 645 G--VGGLGGIPPAAAAKAAKYGVAARPG 670
G V G G+P A + G RPG
Sbjct: 2749 GERVVGAPGVPGAPGER----GEQGRPG 2772
Score = 141 bits (355), Expect = 2e-33
Identities = 211/691 (30%), Positives = 250/691 (36%), Gaps = 117/691 (16%)
Query: 26 PGGVPG--AIPG--GVPGGVFYPGAGLGALGG-GALGPGGKPLKPVPGGLAGAGLGAGLG 80
P G PG + G G PG PG LG G G G G+P KP GL G G G
Sbjct: 1995 PIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEA 2054
Query: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAG 140
P K + G G PG+ G P P V +PG G
Sbjct: 2055 GRPGER------------GERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPG 2102
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGP 199
+ + P GL G G + P G +PG+ G +P G G G+PG
Sbjct: 2103 LSGEQGPP-GLKGAKGEPGSNGDQGPKGDRGVPGIKGDRG-EPGPRGQDGN-PGLPGERG 2159
Query: 200 FGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQA 259
GP+ L P P GG+G P GP G G AG AG PQ
Sbjct: 2160 MAGPEGKPGLQGPRGPPGPVGGHGDP----------GPPGAPGLAGPAG--------PQG 2201
Query: 260 AAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--------AIPGIGGIAG-VGTPAAAA 310
+ + + G G+ G G+PG PG PG+ G G G P A
Sbjct: 2202 PSGLKGEPG-ETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPG 2260
Query: 311 AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG----AGVPG---VGVPGA-GIPVVPG- 361
A+ K G+ VPG PG PG VG G G PG VG+PGA G PG
Sbjct: 2261 RDGASGKDGDRGSPG--VPGSPGL-PGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGG 2317
Query: 362 -----AGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGF-GV 414
G PGA G+ P A +A + G G G P G GF G GV
Sbjct: 2318 LAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAP----GPKGFKGDPGV 2373
Query: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
GV G PG G PGV G G+ G+PG PGV PG G
Sbjct: 2374 GVPGSPGPPGPPGVKGDLGLPGLPG--------------------APGVVGFPGQTGPRG 2413
Query: 475 VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA 534
PG G+ PG PG PG PG V S K G
Sbjct: 2414 EMGQPGPSGERGLAGPPGREGIPGPLGPPG-PPGSVGPPGASGLK-------GDKGDPGV 2465
Query: 535 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPG--------ALAAAKAAKYGAAV- 585
G+PG G PG+ G PG G+ G G A K K +AV
Sbjct: 2466 GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVI 2525
Query: 586 ---PGVLGGLGALGGVGIPGGVVG-AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 641
PG G G +G G P G+ G GP + G G+AGL GL G L
Sbjct: 2526 LGPPGPRGAKGDMGERG-PRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLR-GLL 2583
Query: 642 GVPGVGGLGGIP--PAAAAKAAKYGVAARPG 670
G G G GIP P + K G+ G
Sbjct: 2584 GPQGQPGAAGIPGDPGSPGKDGVPGIRGEKG 2614
Score = 132 bits (332), Expect = 1e-30
Identities = 209/717 (29%), Positives = 243/717 (33%), Gaps = 130/717 (18%)
Query: 26 PGGVPGAIPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFP 83
P G PG +PG G PG PG+ G G G+P P G G GL P
Sbjct: 1270 PPGDPG-LPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSP 1328
Query: 84 AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPG--VGGLGVSAAPSVPGAVVPQPGAGV 141
+PG D + + G G PG +GG G P +PG PG
Sbjct: 1329 G-------LPGPRGDPGE--RGPRGPKGEPGAPGQVIGGEG----PGLPGR-KGDPGPSG 1374
Query: 142 KPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVK-PKAPGVGGAFAGIPGV-GP 199
PG +G PG LPG + G G + P PG GG G PG+ G
Sbjct: 1375 PPGPRGPLGDPGPRGPPGLPGT------AMKGDKGDRGERGPPGPGEGGIAPGEPGLPGL 1428
Query: 200 FGGPQPGVPLGYPIK----------APKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGY 249
G P P P+G P K AP LPG G P G GP G G G G+
Sbjct: 1429 PGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGP----RGPPGAIGPKGDRGF 1484
Query: 250 PTGTG-------------VGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG---- 292
P G G + A + AK G G G G PG PG
Sbjct: 1485 PGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAV 1544
Query: 293 AIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPG-------FGP----GVVG 340
P + G G G A A + G ++PG PG GP G G
Sbjct: 1545 VGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAG 1604
Query: 341 VPG-AGVPG----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 395
PG +G PG G PG PV P G P KA + G R G
Sbjct: 1605 PPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPG 1664
Query: 396 VGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAA 455
V G P G G PG G G PG +G G G PG G PG + A +
Sbjct: 1665 VRG-PVGEKGDQGDPGED-GRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPG 1722
Query: 456 KYGLV--------PGVGVAPGVGVAPGVGVAPGVGLAPGV-GVA--------PGVGVAPG 498
G PG+ APG G PG PGV G A PG+ G
Sbjct: 1723 DRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSG 1782
Query: 499 VGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGL 557
+ PG GP G AA A G+PGL G+PG G+PG
Sbjct: 1783 LDGKPGAAGPSGPNGAAGKAGDPGRD-----------GLPGLRGEQGLPGPSGPPGLPGK 1831
Query: 558 GVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAK 617
G PG G PG G G G G G GP A
Sbjct: 1832 PGEDGKPGLNGKNGE----------PGDPGEDGRKGEKGDSGASGREGRDGPKGERGAP- 1880
Query: 618 AAAKAAQFGLVGAAGLGGL----GVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 670
G++G G GL G G G PGV G G P + G PG
Sbjct: 1881 --------GILGPQGPPGLPGPVGPPGQGFPGVPG-GTGPKGDRGETGSKGEQGLPG 1928
Score = 128 bits (321), Expect = 2e-29
Identities = 210/735 (28%), Positives = 261/735 (35%), Gaps = 125/735 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P+ P G G P G+ PG G GP G + P G +G G
Sbjct: 1561 PAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGR 1620
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVPQPGAGV 141
P PG + P G D K + G G+PG G G+ AP V G V + G
Sbjct: 1621 PGP--PGPVGPRG-RDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQG- 1676
Query: 142 KPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG--VPTGAGVKPKA--------------- 184
PG+ G PG G PG PG V TG G + K
Sbjct: 1677 DPGEDGRNGSPG--SSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKG 1734
Query: 185 -PGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPK-------LPGGYGLPYTTGKLPYGY 235
PG+ GA G G+ F GP PG P G P ++ P PG G GK P
Sbjct: 1735 DPGLPGA-PGERGIEGFRGP-PG-PQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK-PGAA 1790
Query: 236 GPGGVAGAAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGV 290
GP G GAAGKAG P G+ G Q + G G PG+ G G PG
Sbjct: 1791 GPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK-PGLNGKNGEPGD 1849
Query: 291 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGV- 349
PG G G A+ + GA L P GP PG VG PG G PGV
Sbjct: 1850 PGED---GRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVP 1906
Query: 350 ------------------GVPG-AGIPVVPG-----------AGIPGAAVPGVVS----- 374
G+PG G+ PG AGI +A+ +V
Sbjct: 1907 GGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDES 1966
Query: 375 -------PEAAAKAAAKAAKYGARPGVGVGGIP--------TYGVGAGGFPGFGVGVGGI 419
PE + + G G G P G G PG +G G
Sbjct: 1967 SGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGP 2026
Query: 420 PGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAP 479
PG +G+ G G PG+ G+PG +A +A + G G G G P
Sbjct: 2027 PGPSGLAGEPGKPGIPGLPG-------RAGGVGEAGRPG-ERGERGEKGERGEQGRDGPP 2078
Query: 480 GVGLAPGVGVAPGVGVA---PGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGI 536
G+ PG PG V+ PG G++ GP G+ A + G+
Sbjct: 2079 GLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKG-----DRGV 2133
Query: 537 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 596
PG+ G PG G PGL G+ G PG PG +GG G G
Sbjct: 2134 PGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGP-------RGPPGPVGGHGDPG 2186
Query: 597 GVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL-GVPGVGGLGGIPPA 655
G PG AGPA + + + G G G G GL G PG GL G P
Sbjct: 2187 PPGAPG---LAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVG-PQG 2242
Query: 656 AAAKAAKYGVAARPG 670
+ + G +PG
Sbjct: 2243 SPGLPGQVGETGKPG 2257
Score = 121 bits (303), Expect = 2e-27
Identities = 196/686 (28%), Positives = 239/686 (34%), Gaps = 85/686 (12%)
Query: 23 PSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKP-VPGGLAGAGLGAGL 79
P PG G+PG+ PG P G P G G G G P +P PG G +
Sbjct: 1420 PGEPGLPGLPGS-PG--PQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAI 1476
Query: 80 GAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGA 139
G FPG L G + AG G+PGV G + P P + G
Sbjct: 1477 GPKGDRGFPGPLGEAG----EKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGE 1532
Query: 140 GVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGA-GVKPKAPGVGGAFAGIPGVG 198
+PG+ G P V G + G + V P P GA GV+ + G G P G
Sbjct: 1533 KGEPGR---PGDPAVV-GPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDP--G 1586
Query: 199 PFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTG-VGP 257
P G P P+G +A PG G P G P GP G G G+ G G GP
Sbjct: 1587 PKGDPGDRGPIGLTGRAGP-PGDSGPPGEKGD-PGRPGPPGPVGPRGRDGEVGEKGDEGP 1644
Query: 258 QAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAG----VGTPAA 308
KA + GA GV VG G G PG PG G G G P
Sbjct: 1645 PGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGP 1704
Query: 309 AA----AAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV-GVPG-AGIPVVPG 361
A + + G P GP PG+ G PG G+ G G PG G P V G
Sbjct: 1705 PGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRG 1764
Query: 362 -AGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGI 419
AG G PG+ A G G G P G G PG G G+
Sbjct: 1765 PAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDP----GRDGLPGLR-GEQGL 1819
Query: 420 PGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVA--------PGVGV 471
PG +G PG+ G PG G PG+ + + + G G + G
Sbjct: 1820 PGPSGPPGLPGKPGEDGKPGLN-GKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERG 1878
Query: 472 APGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGG--VAAAAKSAAKVAAKAQLRAA 529
APG+ G PG PG G GV G GP G +K + + LR
Sbjct: 1879 APGILGPQGPPGLPGPVGPPGQGFP---GVPGGTGPKGDRGETGSKGEQGLPGERGLRGE 1935
Query: 530 AGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVL 589
G + L G+ + V +G F VP K PG
Sbjct: 1936 PGSVPNVDRLLETAGIKASALREIVETWDESSG--SFLPVPERRRGPKGDSGEQGPPGKE 1993
Query: 590 GGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGL 649
G +G G G+ G GP G GL +G G PG GL
Sbjct: 1994 GPIGFPGERGLKGDRGDPGP---------------------QGPPGLALGERGPPGPSGL 2032
Query: 650 GGIP-----PAAAAKAAKYGVAARPG 670
G P P +A G A RPG
Sbjct: 2033 AGEPGKPGIPGLPGRAGGVGEAGRPG 2058
Score = 120 bits (300), Expect = 6e-27
Identities = 191/621 (30%), Positives = 223/621 (35%), Gaps = 102/621 (16%)
Query: 111 GLGGVPGVGG-LGVSAAPSVPGAVVPQ-----PGAGVKPGKVPGVGLPGVYPG--GVLPG 162
G G PG+ G G PG+ + PGA +PG G PG PG G+
Sbjct: 1269 GPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGT-PGAPGLKGS 1327
Query: 163 ARFPGVGVLPGV--PTGAGVKPKAPG--VGGAFAGIPG----VGPFGGPQPGVPLGYPIK 214
PG PG P G +P APG +GG G+PG GP G P P PLG P
Sbjct: 1328 PGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDP-- 1385
Query: 215 APKLPGGYGLPYTTGKL---------PYGYGPGGVA-GAAGKAGYPTGTGVGPQAAAAAA 264
P+ P G LP T K P G G GG+A G G G P G PQ
Sbjct: 1386 GPRGPPG--LPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPG--PQGPVGPP 1441
Query: 265 AKAAAKFGA--GAAGVLPG----------------VGGAGVPGVPGAIPGIGGIAGVGTP 306
K K + GA G LPG +G G G PG + G G P
Sbjct: 1442 GKKGEKGDSEDGAPG-LPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500
Query: 307 AAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPG 366
A + A + GA P GP G G PG G P V G + G
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGR---------PGDPAVVGPAVAG 1551
Query: 367 -AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG----FGV-GVGGIP 420
G V P A + G PG+ + G P G G PG G+ G G P
Sbjct: 1552 PKGEKGDVGPAGPRGATGVQGERGP-PGLVLPGDP----GPKGDPGDRGPIGLTGRAGPP 1606
Query: 421 GVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPG 480
G +G PG G PG G PG + P + + G PG PG G+ APG
Sbjct: 1607 GDSGPPGEKGDPGRPGPPG-PVGPRGRDGEVGEKGDEG-PPGDPGLPGKAGERGLRGAPG 1664
Query: 481 VGLAPGVGVAPGVGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA---GI 536
V G G G +PG GP G G GA G
Sbjct: 1665 VRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVD----TGPGAREKGE 1720
Query: 537 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALG 596
PG G G G+PG G+ GF PG PGV G G G
Sbjct: 1721 PGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGP----------QGDPGVRGPAGEKG 1770
Query: 597 GVGIPG-----GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGG 651
G PG G+ G AA + AA A G G GL GL G G+PG G G
Sbjct: 1771 DRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKA--GDPGRDGLPGLR-GEQGLPGPSGPPG 1827
Query: 652 IP--PAAAAKAAKYGVAARPG 670
+P P K G PG
Sbjct: 1828 LPGKPGEDGKPGLNGKNGEPG 1848
Score = 117 bits (292), Expect = 5e-26
Identities = 226/747 (30%), Positives = 263/747 (35%), Gaps = 128/747 (17%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P P G PGA PG V GG G GL G GP G P P G G GL
Sbjct: 1342 PRGPKGEPGA-PGQVIGG---EGPGLPGRKGDP-GPSGPPGPRGPLGDPGPRGPPGL--- 1393
Query: 83 PAVTFPGALVPGGVADAAAAYKAAKAGAGLGGV-PGVGGL-GVSAAPSVPGAVVPQPGAG 140
PG + G D + G G GG+ PG GL G+ +P G V P G
Sbjct: 1394 -----PGTAMKGDKGDRG---ERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKG 1445
Query: 141 VKPGKVPGV-GLPGVYPGGV-------LPGARFP-GVGVLPGVPTGAGVKPKA--PGVGG 189
K G GLPG PG PGA P G PG AG K + PG G
Sbjct: 1446 EKGDSEDGAPGLPG-QPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAG 1504
Query: 190 AFAGIPGV-------GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAG 242
+ G+PGV GP G P P G + PG G P G P GP G G
Sbjct: 1505 S-RGLPGVAGRPGAKGPEGPPGPTGRQGEKGE----PGRPGDPAVVG--PAVAGPKGEKG 1557
Query: 243 AAGKAGYPTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIG 298
G AG TGV GP K G G + G AG PG G PG
Sbjct: 1558 DVGPAGPRGATGVQGERGPPGLVLPG-DPGPKGDPGDRGPIGLTGRAGPPGDSGP-PGEK 1615
Query: 299 GIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVP---- 352
G G G P + + G PG PG PG G G G PGV P
Sbjct: 1616 GDPGRPGPPGPVGPRGRDGEVGEKGDEGP--PGDPGL-PGKAGERGLRGAPGVRGPVGEK 1672
Query: 353 -GAGIPVVPGA-GIPGAA-------VPGVVSPEAAAKAAAKAAKYGARPG---------- 393
G P G G PG++ PG P A+ PG
Sbjct: 1673 GDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGP 1732
Query: 394 VGVGGIPTYGVGAGGFPGF----------GV-GVGGIPGVAGVPGVGGVPGVGGVPGVGI 442
G G+P G G GF GV G G G G PG+ G G+ G PG
Sbjct: 1733 KGDPGLPG-APGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAA- 1790
Query: 443 SPEAQAAAAAKAAKYGL--VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVG 500
P AA KA G +PG+ G+ PG PG+ PG PG+ G
Sbjct: 1791 GPSGPNGAAGKAGDPGRDGLPGLRGEQGL---PGPSGPPGLPGKPGEDGKPGLNGKNGEP 1847
Query: 501 VAPGI----GPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVPGLGVGAGVP 555
PG G G + A+ + K + A LG G PGL VG PG G GVP
Sbjct: 1848 GDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGF-PGVP 1906
Query: 556 GLGVGA-------------GVPGF-------GAVPGALAAAKAAKYGA-AVPGVLGGLGA 594
G G G G+PG G+VP + A A A+ ++
Sbjct: 1907 G-GTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDE 1965
Query: 595 LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPP 654
G +P GP + K G G GL G G PG G G+
Sbjct: 1966 SSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKG----DRGDPGPQGPPGLAL 2021
Query: 655 AAAAKAAKYGVAARPGFGLSPIFPGGA 681
G+A PG P PG A
Sbjct: 2022 GERGPPGPSGLAGEPGKPGIPGLPGRA 2048
Score = 97.8 bits (242), Expect = 3e-20
Identities = 148/501 (29%), Positives = 170/501 (33%), Gaps = 81/501 (16%)
Query: 232 PYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGV 290
P G G G G G P TG GPQ +A + GA G G AG PG
Sbjct: 1259 PGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGT 1318
Query: 291 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG-PGVVGVPG-AGVPG 348
PGA PG+ G G+ P A G V GG G G PG G PG +G PG
Sbjct: 1319 PGA-PGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPG 1377
Query: 349 ----VGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV 404
+G PG P G+PG A+ G PG G GGI
Sbjct: 1378 PRGPLGDPGPRGP----PGLPGTAMKGDKGDRGER----------GPPGPGEGGIAPGEP 1423
Query: 405 GAGGFPGF----------------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQA 448
G G PG G G PG+ G PG G G G PG I P+
Sbjct: 1424 GLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPG-AIGPKGDR 1482
Query: 449 AAAAKAAKYGL--------------VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVG 494
+ G +PGV PG A G PG G PG
Sbjct: 1483 GFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPG---AKGPEGPPGPTGRQGEKGEPGRP 1539
Query: 495 VAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAG 553
P V V P + GP G A A G +PG G PG G
Sbjct: 1540 GDPAV-VGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPG---DRG 1595
Query: 554 VPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAA 613
GL AG PG PG PG G G +G G G V G
Sbjct: 1596 PIGLTGRAGPPGDSGPPGE----------KGDPGRPGPPGPVGPRGRDGEVGEKGDEGPP 1645
Query: 614 AAAKAAAKAAQFGLVGAAGL-GGLG-VGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGF 671
KA + GL GA G+ G +G G G PG G G P ++ K G PG
Sbjct: 1646 GDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPK----GDRGEPG- 1700
Query: 672 GLSPIFPGGACLGKACGRKRK 692
P P G + G + K
Sbjct: 1701 ---PPGPPGRLVDTGPGAREK 1718
Score = 91.7 bits (226), Expect = 2e-18
Identities = 155/545 (28%), Positives = 184/545 (33%), Gaps = 168/545 (30%)
Query: 23 PSRPG--GVPGAI-PGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGL 79
P PG G+PG + P G PG PG + L PG K K PGGLAG +G
Sbjct: 2274 PGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGL------PGAKGEKGAPGGLAGDLVGE-- 2325
Query: 80 GAFPAVTFPGAL----VPGGVADAAAAYKAAKAGA----GLGGVPGVGGLGVSAAPSVPG 131
PGA +PG + A +A + G G G PG G VPG
Sbjct: 2326 --------PGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPG 2377
Query: 132 AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG-- 189
+ PG PG +GLPG LPGA PGV PG TG + PG G
Sbjct: 2378 S----PGPPGPPGVKGDLGLPG------LPGA--PGVVGFPG-QTGPRGEMGQPGPSGER 2424
Query: 190 AFAGIPG----VGPFGGPQPGVPLGYP----IKAPKLPGGYGLPYTTGKL---------- 231
AG PG GP G P P +G P +K K G GLP G+
Sbjct: 2425 GLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDG 2484
Query: 232 -PYGYGPGGVAGAAGKAGYPTGTG-----------------VGPQAAAAAAAKAAAKFGA 273
P GP G+ G G G G +GP A +
Sbjct: 2485 RPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPR 2544
Query: 274 GAAGVLPGVGGAGVPGVPGA-----------IPGIGGIAGV-GTPAAAAAAAAAAKAAKY 321
G G G G PG G+ +PG+ G+ G G P AA K
Sbjct: 2545 GLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKD 2604
Query: 322 GAAAGLVPG-----------GPGFGPGVVGVPGA-GVPG-------VGVPGA-------- 354
G VPG GP G GV GA G+ G G PG
Sbjct: 2605 G-----VPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKG 2659
Query: 355 --GIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 411
G P VPG +G PG G++ P+ + G + G G P G GGFPG
Sbjct: 2660 EMGEPGVPGQSGAPGKE--GLIGPKGDRGFDGQPGPKGDQGEKGERGTP----GIGGFPG 2713
Query: 412 FG-------------------------------------VGVGGIPGVAGVPGVGGVPGV 434
VG G+PG G G G PG
Sbjct: 2714 PSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGP 2773
Query: 435 GGVPG 439
G G
Sbjct: 2774 AGPRG 2778
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 144 bits (362), Expect = 4e-34
Identities = 224/750 (29%), Positives = 275/750 (36%), Gaps = 147/750 (19%)
Query: 11 PGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGA----GLGALGGGALGPGGKPLKPV 66
PG ++ S+ +P P G+ G + G PGG G GL A G +GP G P P
Sbjct: 453 PGSSVIYCSVGNPG-PQGIKGKV--GPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPG 509
Query: 67 PGGLAG-AGLGAGLGAFPAVTFPGALVPGGV-----ADAAAAYKAAKAGAGLGGVPG-VG 119
G G GL LG PGA P G+ A K AK + V G G
Sbjct: 510 RQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKG 569
Query: 120 GLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGG---VLPGAR-FPGVGVLPGVP 175
G P PG QPG+ + G G PG PG PG + FPG P P
Sbjct: 570 ERGPDGPPGFPG----QPGSHGRDGHAGEKGDPGP-PGDHEDATPGGKGFPG----PLGP 620
Query: 176 TGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP-IKAPK-LPGGYGLPYTTG-KLP 232
G PG+G F G PG PGVP G+P ++ P L G G + P
Sbjct: 621 PGKAGPVGPPGLG--FPGPPGERG----HPGVP-GHPGVRGPDGLKGQKGDTISCNVTYP 673
Query: 233 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
+GP G G G G+P GPQ A + K G G A +PG PG
Sbjct: 674 GRHGPPGFDGPPGPKGFP-----GPQGAPGLSGSDGHKGRPGTPGT------AEIPGPPG 722
Query: 293 -----AIPGIGGIAG---VGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG- 343
PG GG G VG P + + +PG P FG +G PG
Sbjct: 723 FRGDMGDPGFGGEKGSSPVGPPGPPGSPGVNGQKG--------IPGDPAFGH--LGPPGK 772
Query: 344 ---AGVPGVGVPGAGIPVVPGA----GIPG-------------AAVPGVVSPEAAAKAAA 383
+GVPG+ P G P PGA GIPG A PGV P
Sbjct: 773 RGLSGVPGIKGP-RGDPGCPGAEGPAGIPGFLGLKGPKGREGHAGFPGVPGPPG------ 825
Query: 384 KAAKYGARPGV-GVGGIPTYGVGAGGFPGFG----------VGVGGIPGVAGVPGVGGVP 432
+ + GA PG+ G G+P Y G G G G+ G+PG+ G PG G P
Sbjct: 826 HSCERGA-PGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPP 884
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG 492
G+ G+PG + GL PG PG PG PG PG G
Sbjct: 885 GLPGIPG-PFGDDGLPGPPGPKGPRGL-PGFPGFPGERGKPGAEGCPGAKGEPGEKGMSG 942
Query: 493 VGVAPGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGA----GIPGLGVGVGVPG 547
+ G+ A G IGP G ++A +Q G G PG G PG
Sbjct: 943 LPGDRGLRGAKGAIGPPG------DEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTPG 996
Query: 548 LGVGAGVPGL----GVGAGVPGFGAVPG-----ALAAAKAAKYGAAVPGVLGGLGALGGV 598
+ G PG G G PG PG + + PG+ G G G
Sbjct: 997 MQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSP 1056
Query: 599 GIPG--GVVGA--------------GPAAAAAAAKAAAKAAQFGLVGAAGLGGL--GVGG 640
G PG G+ GA GP + FG G GL G+ G
Sbjct: 1057 GPPGFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGIQGPRGS 1116
Query: 641 LGVPGVGGLGGIPPAAAAKAAKYGVAARPG 670
G PG G G PP G+ +PG
Sbjct: 1117 PGRPGPPGSSG-PPGCPGDHGMPGLRGQPG 1145
Score = 138 bits (347), Expect = 2e-32
Identities = 240/827 (29%), Positives = 288/827 (34%), Gaps = 211/827 (25%)
Query: 28 GVPGAI-------PGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAG 78
G PGA P GVPG +PG L + G G GP GKP G++G G
Sbjct: 98 GPPGAAGDKGDKGPTGVPG---FPG--LDGIPGHPGPPGPRGKP------GMSGHNGSRG 146
Query: 79 LGAFPAVTFPGALVPGG----------------VADAAAAYKAAKAGAGLGGVPGVGGLG 122
FP GAL PGG + A + + GL G+PG G G
Sbjct: 147 DPGFPGGR--GALGPGGPLGHPGEKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGSWGAG 204
Query: 123 VSAAPS----VPGAVVP-----------QPGAGVK-----PGKVPGVGLPG--------- 153
A P+ PG V P PG GVK PG+V G PG
Sbjct: 205 GPAGPTGYPGEPGLVGPPGQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPD 264
Query: 154 --VYPGGVLPGAR-FPGVGVLPGVP-----TGAGVK--------------------PKAP 185
+Y G G + PG+ LPG P +G G K P P
Sbjct: 265 FCLYKGE--KGIKGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFP 322
Query: 186 GVGG--AFAGIPG----VGPFGGP-------QPGVPLGYPIKAPKLPGGYGLPYTTGKLP 232
G+ G G PG +GP G P PGV + P+ PG G P G+
Sbjct: 323 GLKGELGLVGDPGLFGLIGPKGDPGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETG 382
Query: 233 YGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGG-AGVPGVP 291
GP G G G+ G +GP G G LPG+ G AG+PG P
Sbjct: 383 -DVGPPGPPGLLGRPGEACAGMIGPPGPQ------------GFPG-LPGLPGEAGIPGRP 428
Query: 292 GAIPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAA--------GLV--PGGPG------- 333
+ PG G G G P A + Y + G V PGG G
Sbjct: 429 DSAPGKPGKPGSPGLPGAPGLQGLPGSSVIYCSVGNPGPQGIKGKVGPPGGRGPKGEKGN 488
Query: 334 -----FGPGVVGVPG-AGVPG-------VGVPG----AGIPVVPGA----GIPG----AA 368
PG +G PG G+PG +G+PG G P PGA G+PG +
Sbjct: 489 EGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASG 548
Query: 369 VPG--------VVS----------PEAAAKAAAKAAKYGARPGVGVGGIP-------TYG 403
PG VVS P+ + +G G G P
Sbjct: 549 PPGNKGAKGDMVVSRVKGHKGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDAT 608
Query: 404 VGAGGFPGFGVGVGGIPGVAGVPGVG--GVPGVGGVPGVGISPEAQAAAAAKAAKYGLV- 460
G GFPG +G G G G PG+G G PG G PGV P + K K +
Sbjct: 609 PGGKGFPG-PLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQKGDTIS 667
Query: 461 -----PGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAA 514
PG PG PG PG APG+ + G PG G A GP G
Sbjct: 668 CNVTYPGRHGPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDM 727
Query: 515 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGV--GAGVPGLGVGAGVPGFGAVPGA 572
K G PG+ G+PG G PG +GVPG P
Sbjct: 728 GDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKG-PRG 786
Query: 573 LAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 632
A+ A +PG LG G G G G GP + A Q GL G G
Sbjct: 787 DPGCPGAEGPAGIPGFLGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPGLPGYPG 846
Query: 633 LGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
G GG G PG G PP A G+ RPG P PG
Sbjct: 847 SPG-APGGKGQPGDVG----PPGPAGMKGLPGLPGRPGAHGPPGLPG 888
Score = 130 bits (326), Expect = 5e-30
Identities = 229/784 (29%), Positives = 267/784 (34%), Gaps = 178/784 (22%)
Query: 22 HPSRPGGVPGA--IPG--GVPGGVFYPGAGLGALGGGALGPGGKPLKP-------VPGGL 70
H RPG PG IPG G G + PG G G G +GP G P P +PG
Sbjct: 705 HKGRPG-TPGTAEIPGPPGFRGDMGDPGFG-GEKGSSPVGPPGPPGSPGVNGQKGIPGDP 762
Query: 71 AGAGLGA----GLGAFPAVT-------FPGALVPGGVAD--AAAAYKAAKAGAGLGGVPG 117
A LG GL P + PGA P G+ K + AG GVPG
Sbjct: 763 AFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPGFLGLKGPKGREGHAGFPGVPG 822
Query: 118 VGGLGVS-AAPSVPGAVVPQPGAGVKPGKVPGVGLPG-VYPGGVLPGARFPGVGVLPGVP 175
G AP +PG PG PG G G PG V P G PG LPG P
Sbjct: 823 PPGHSCERGAPGIPGQP-GLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPG---LPGRP 878
Query: 176 TGAGVKPKAPGVGGAFA--GIPGVGPFGGPQ--PGVPLGYPIKAPKLPGGYGLPYTTGK- 230
GA P PG+ G F G+PG GP+ PG P G+P + K PG G P G+
Sbjct: 879 -GAHGPPGLPGIPGPFGDDGLPGPPGPKGPRGLPGFP-GFPGERGK-PGAEGCPGAKGEP 935
Query: 231 -------LPYGYGPGGVAGAAGKAGYPTGTGV-------------GPQAAAAAAAKAAAK 270
LP G G+ GA G G P G GP + K
Sbjct: 936 GEKGMSGLP---GDRGLRGAKGAIGPPGDEGEMAIISQKGTPGEPGPPGDDGFPGERGDK 992
Query: 271 -------------------FGAGAAGVLPGVGGAGVPGVPGA--------IPGIGGIAGV 303
F G G G G PG PG+ PG+ G G
Sbjct: 993 GTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGE 1052
Query: 304 -GTPA----AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-------AGVPGV-- 349
G+P + A K K A+ P GP PG G PG G+PG+
Sbjct: 1053 PGSPGPPGFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGIQG 1112
Query: 350 --------GVPGA-GIPVVPG-------------------------AGIPGAAVPGVVSP 375
G PG+ G P PG GIPG PG+ P
Sbjct: 1113 PRGSPGRPGPPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGP--PGIKGP 1170
Query: 376 EAAAKAAAKAAKYGARPGVGVGGIPTYGV-GAGGFPGFGVGVGGIPGVAGV--PGVGGVP 432
+ G + G G+ G G G PG G G PG G+ PG G
Sbjct: 1171 SGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGIPGLK-GERGDPGSPGISPPGPRGKK 1229
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPG----VG 488
G G PG P A A +A K PG G G APG PG +
Sbjct: 1230 GPPGPPGSS-GPPGPAGATGRAPKDIPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLR 1288
Query: 489 VAPGVGVAPGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA-GIPGLGVGVGVP 546
PG PG PG GP G K K + G G PG G+P
Sbjct: 1289 GEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLP 1348
Query: 547 GLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVG 606
G PG G+PG PG A +PG G G G +G+PG
Sbjct: 1349 G------PPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGAMGLPGMRGP 1402
Query: 607 AGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVA 666
+GP G G GL G GV GV G G PP + G
Sbjct: 1403 SGP----------------GCKGEPGLD----GRRGVDGVPGSPG-PPGRKGDTGEDGYP 1441
Query: 667 ARPG 670
PG
Sbjct: 1442 GGPG 1445
Score = 124 bits (312), Expect = 2e-28
Identities = 198/658 (30%), Positives = 228/658 (34%), Gaps = 120/658 (18%)
Query: 23 PSRPG--GVPGAIPG-GVPGGVFYPG-AGLGALGG-----GALGPGGKPLKPVPGGLAGA 73
P PG G PGA G G PG V PG AG+ L G GA GP G P +PG
Sbjct: 839 PGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLP--GIPGPFGDD 896
Query: 74 GLGA--------GLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVS 124
GL GL FP FPG G A+ K G+ G+PG GL G
Sbjct: 897 GLPGPPGPKGPRGLPGFPG--FPGERGKPG-AEGCPGAKGEPGEKGMSGLPGDRGLRGAK 953
Query: 125 AAPSVPG-----AVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAG 179
A PG A++ Q G +PG G PG PG + G
Sbjct: 954 GAIGPPGDEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTPGMQ------------GRR 1001
Query: 180 VKPKAPGVGGAFAGIPGV----GPFGGPQPGVPLGYP--IKAPKLPGGYGLPYTTGKLPY 233
+P G G G PG GP G P P G I P LPG G P + G P
Sbjct: 1002 GEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPG--PP 1059
Query: 234 GY-GPGGVAGAAGKAGYPTGT--GVGPQAAAAAAAKAAAKFGAGAAGVLPGV----GGAG 286
G+ G G G G G P GP+ + FGA LPG+ G G
Sbjct: 1060 GFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPG-CPGHFGASGEQGLPGIQGPRGSPG 1118
Query: 287 VPGVPGA-----IPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVG 340
PG PG+ PG G+ G+ G P G GP PG+ G
Sbjct: 1119 RPGPPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNG 1178
Query: 341 VPG---------------AGVPG-VGVPGA----GIPVVPGAGIPGA-------AVPGVV 373
+ G G PG VG+PG G P PG PG PG
Sbjct: 1179 LHGLKGQKGTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSS 1238
Query: 374 SPEAAAKAAAKAAKYGARPGV-------GVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVP 426
P A A +A K PG G G P G G PG + G PG G+P
Sbjct: 1239 GPPGPAGATGRAPKDIPDPGPPGDQGPPGPDG-PRGAPGPPGLPGSVDLLRGEPGDCGLP 1297
Query: 427 GVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVP----GVGVAPGVGVAPGVGVAPGVG 482
G G PG G PG P K P G PG PG G
Sbjct: 1298 GPPGPPGPPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPT 1357
Query: 483 LAPGVGVAPGVGV-------APGVGVAPGI-GPGGVAAAAKSAAKVAAKAQLRAAAGLGA 534
PG PG PG+ APG+ GP G +R +G G
Sbjct: 1358 GLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGAMGL----------PGMRGPSGPGC 1407
Query: 535 -GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGG 591
G PGL GV G+ G PG G G+ PG PG LGG
Sbjct: 1408 KGEPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGPGPPGPIGDPGPKGFGPGYLGG 1465
Score = 95.9 bits (237), Expect = 1e-19
Identities = 143/491 (29%), Positives = 173/491 (35%), Gaps = 106/491 (21%)
Query: 197 VGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVG 256
+GP GG V P K G G P GP G G G G P G
Sbjct: 44 IGPCGGRDCSVCHCVPEK-----GSRGPP----------GPPGPQGPIGPLGAP-----G 83
Query: 257 PQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGV-GTPAAAAAAA 313
P + + GAAG G GVPG PG IPG G G G P +
Sbjct: 84 PIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNG 143
Query: 314 AAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVV 373
+ G L PGGP PG G G V +G AV G+
Sbjct: 144 SRGDPGFPGGRGALGPGGPLGHPGEKGEKGNSVFILG-----------------AVKGI- 185
Query: 374 SPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPG 433
G R G+ G+P GAGG P G G PG+ G PG G PG
Sbjct: 186 --------------QGDRGDPGLPGLPG-SWGAGG-PAGPTGYPGEPGLVGPPGQPGRPG 229
Query: 434 VGGVPGVGISPEAQAAAAAKAAKYGLV-PGVGVAP----------GVGVAPGVGVAPGVG 482
+ G PGVG+ + Q + + G P + V P G+ PG+ PG
Sbjct: 230 LKGNPGVGV--KGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMVGLPG-- 285
Query: 483 LAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVG 542
PG G+G G+ GP G + S K +L GL G PGL
Sbjct: 286 -PPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFPGLKGEL----GL-VGDPGLFGL 339
Query: 543 VGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYG-AAVPGVLGGLGALGGVGIP 601
+G G G PG PG L G PG G G G VG P
Sbjct: 340 IGPKGDPGNRGHPG------------PPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPP 387
Query: 602 G--GVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAK 659
G G++G A A G++G G G G G+PG G+ G P +A K
Sbjct: 388 GPPGLLGRPGEACA------------GMIGPPGPQGF-PGLPGLPGEAGIPGRPDSAPGK 434
Query: 660 AAKYGVAARPG 670
K G PG
Sbjct: 435 PGKPGSPGLPG 445
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 140 bits (354), Expect = 3e-33
Identities = 213/742 (28%), Positives = 266/742 (35%), Gaps = 123/742 (16%)
Query: 1 MAGLTAAAPRPGVLLLLLSILHPSRPG---GVPGAIPGGVPGGVFYPGA-GLGALGGGAL 56
MAG A AP +LLLLL L + G+PG P G PG PG G+ G
Sbjct: 1 MAGPRACAPL--LLLLLLGELLAAAGAQRVGLPG--PPGPPGPPGKPGQDGID----GEA 52
Query: 57 GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVP 116
GP G P P P G G G P + L + G G P
Sbjct: 53 GPPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPP 112
Query: 117 GVGGLGVSAAPSVPGAVVPQPGAGVK----PGKVPGV----------GLPGVYPGGV--- 159
G+GG G+ P G P G G++ P +PG+ G PGV P G
Sbjct: 113 GLGGKGLPGPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDL 172
Query: 160 -LPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYP----IK 214
P PG PG+P G G G + G G P P P G P ++
Sbjct: 173 QCPSICPPGPPGPPGMPGFKG----PTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQ 228
Query: 215 APK----LPGGYGLPYTTGKLPYGY-GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAA 269
P+ LPG G P G P G+ GP G+ GA GKAG GP+
Sbjct: 229 GPRGLRGLPGPLGPPGDRG--PIGFRGPPGIPGAPGKAG--DRGERGPEGFRGPKGDLGR 284
Query: 270 KFGAGAAGVLPGVGGAGVPGVPG-----AIPGIGGIAGV-------------GTPAAAAA 311
G GV G +G PG+PG +PG+ G G G P
Sbjct: 285 PGPKGTPGV---AGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGR 341
Query: 312 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 371
A + + + G A L GP PGV G AG+PG AG G+A G
Sbjct: 342 AGSKGEKGERGRAGELGEAGPSGEPGVPG--DAGMPGER---------GEAGHRGSA--G 388
Query: 372 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGV 431
+ P+ A G + +G G+P G G G VG G G AG G G+
Sbjct: 389 ALGPQGPPGAPGVRGFQGQKGSMGDPGLP----GPQGLRG-DVGDRGPGGAAGPKGDQGI 443
Query: 432 PGVGGVPG--VGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGV 489
G G+PG + P ++ G + G G GV PG G+
Sbjct: 444 AGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKG-TQGPNGTSGVQGVPGPPGPLGLQG 502
Query: 490 APGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAG--LGAGIPGLGVGVGVPG 547
PGV PG+ PG+ PG K A++ ++R G + I L + P
Sbjct: 503 VPGV---PGITGKPGV-PG----------KEASEQRIRELCGGMISEQIAQLAAHLRKPL 548
Query: 548 LGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGA 607
G PG AG PG PG++ A PG G G LG G G
Sbjct: 549 APGSIGRPG---PAGPPGPPGPPGSIGHPGA----RGPPGYRGPTGELGDPGPRGNQGDR 601
Query: 608 GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL-GVPGVGGLGGIPPAAAAKAAKYGVA 666
G AA A + Q G G G+ G G G PG G PP G
Sbjct: 602 GDKGAAGAGLDGPEGDQ-GPQGPQGVPGTSKDGQDGAPGEPG----PPGDPGLPGAIGAQ 656
Query: 667 ARPGFGLSPIFPGGACLGKACG 688
PG I AC G G
Sbjct: 657 GTPG-----ICDTSACQGAVLG 673
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 140 bits (352), Expect = 5e-33
Identities = 223/719 (31%), Positives = 263/719 (36%), Gaps = 109/719 (15%)
Query: 28 GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKP-LKPVPG--GLAGA-GLGAGLGAFP 83
G+PGA PG G + PG G GP G P L+ VPG GL G GL A LG+ P
Sbjct: 888 GMPGA-PGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLP 946
Query: 84 AVTFPGALVPGGVADAAAA---YKAAKAGAGLGGVPGVGGLGVSAAPSV----PGAVVPQ 136
+ G A Y K G G+PGV GL A + P A +
Sbjct: 947 IEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEAR 1006
Query: 137 -PGAGVKPGKVPGVGLPGVYPGGVLPGARF----PGVGVLPGVPTGAGVKPKAPGVGGAF 191
+ PG V GLPG PG LPG R PG+ PG P G PG GA
Sbjct: 1007 GDNSEGDPGCVGSPGLPGP-PG--LPGQRGEEGPPGMRGSPGPPGPIG----PPGFPGA- 1058
Query: 192 AGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK--LPYGYGPGGVAGAAGKAGY 249
G PG+ G + L P PG G P TG LP G G G+AG+ G
Sbjct: 1059 VGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGE 1118
Query: 250 PTGTGV----GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGT 305
P G GP A + + +G G G G PG PG PG G VG+
Sbjct: 1119 PGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGP-PGFPG--KVGS 1175
Query: 306 PAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPG-AGVPGV----GVPGAGIPVVP 360
P A G + +PG PG PG G+ G AG+ G+ G PG
Sbjct: 1176 PGPPGPQAEKGSEGIRGPSG--LPGSPG-PPGPPGIQGPAGLDGLDGKDGKPGL------ 1226
Query: 361 GAGIPG-AAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIP--TYGVGAGGFPGF--GVG 415
G PG A PG++ P G + G G P T GA G PG G
Sbjct: 1227 -RGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQG 1285
Query: 416 VGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 475
G PG G PG G PG G+ VG+ + A G+ PG PG
Sbjct: 1286 RPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGER---------GLAGLPGQPGPPGH 1336
Query: 476 GVAPGVGLAPGVGVAPGVGVAPG-VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGA 534
PG PG A G PG G GP G AA + K RA G
Sbjct: 1337 PGPPG---EPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKG--RAGMPGGP 1391
Query: 535 GIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA-------------------- 574
G G VG PG G PG +G PG VPG++
Sbjct: 1392 GKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMF 1451
Query: 575 AAKAAKYG---------AAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQF 625
+ A Y AA PG G G G G PG P + + + Q
Sbjct: 1452 DERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPG-----APGSPGLPGQIGREGRQ- 1505
Query: 626 GLVGAAGLGGL----GVGGLGVPGVGGLGGIP-PAAAAKAAKYGVAARPGFGLSPIFPG 679
GL G GL G G G+G+ G GL G P P K G G P PG
Sbjct: 1506 GLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIPGIPG 1564
Score = 136 bits (342), Expect = 7e-32
Identities = 225/777 (28%), Positives = 269/777 (34%), Gaps = 146/777 (18%)
Query: 26 PGGVPG----AIPG--GVPGGVFYPGAGLGALG-GGALGPGGKPLKPVPGGLAG------ 72
P G+PG +PG G PGG P G+ G G GPGGKP KP G G
Sbjct: 451 PPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEVC 510
Query: 73 AGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGA 132
L G F V PG P G A+ G+ G+ G G + SV GA
Sbjct: 511 PTLPEGFQNF--VGLPGKPGPKGEPGDPVP---ARGDPGIQGIKGEKGEPCLSCSSVVGA 565
Query: 133 --VVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGA 190
+V GA G PG GLPG+ +PG + P G+ P PG G
Sbjct: 566 QHLVSSTGASGDVGS-PGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGS---PGPPGPVGP 621
Query: 191 FAGIPGV-------------------------GPFGGP-QPGVP-LGYPIKAPKL----- 218
AGI G GP G +PG P G P K K
Sbjct: 622 -AGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGKQGKAGERGL 680
Query: 219 ---------PGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYP-TGTGVGPQAAAAAAAKAA 268
PG G P TTG+ P G GV G AG G G P A
Sbjct: 681 KGQKGDAGNPGDPGTPGTTGR-PGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAG 739
Query: 269 AKFGAGAAGVL--PGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAG 326
G G GVG G PG PG +PG+ G G+ G
Sbjct: 740 RPGQPGPKGEQGPEGVGRPGKPGQPG-LPGVQGPPGLKGVQGEPGPPGRGVQGPQGE--- 795
Query: 327 LVPGGPGFGPGVVGVPGA-GVPG-VGVPGA-GIPVVPGA----GIPGAAV---PGVVSPE 376
PG PG PG+ G+PG G PG G GA G P V GA G PGA+V PG +
Sbjct: 796 --PGAPGL-PGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQ 852
Query: 377 AAAKAAAKAAKYGARPGVGVGG---IPTYG----VGAGGFPGFGVGVGGIPGVAGVPGVG 429
+ G R G G P+ G G G PG +G PG G PG+
Sbjct: 853 GQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIP 912
Query: 430 GVPGVGGVPGVGISP--EAQAAAAAKAAKYGLVP---------------GVGVAPGVGVA 472
G PG GVPG+ P A+ G +P G PG V
Sbjct: 913 GPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVE 972
Query: 473 PGVGVAPGVGLAPGVGVA-----------------------PGVGVAPGVGVAPGI---- 505
G G+ PG+ PG +PG+ PG+
Sbjct: 973 KGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQR 1032
Query: 506 ---GPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAG 562
GP G+ + + A G G+PGL G+ GL G PG G
Sbjct: 1033 GEEGPPGMRGSPGPPGPIGPPG-FPGAVG-SPGLPGLQGERGLTGLTGDKGEPGPPGQPG 1090
Query: 563 VPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKA 622
PG PG L K + G G G G G+PG AGP + +
Sbjct: 1091 YPGATGPPG-LPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEK 1149
Query: 623 AQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPGFGLSPIFPG 679
G G G G G G PG G G PP A+ G+ G SP PG
Sbjct: 1150 GDQGFQGQPGFPG-PPGPPGFPGKVGSPG-PPGPQAEKGSEGIRGPSGLPGSPGPPG 1204
Score = 119 bits (299), Expect = 7e-27
Identities = 208/710 (29%), Positives = 248/710 (34%), Gaps = 130/710 (18%)
Query: 54 GALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV-PGGVADAAAAYKAAKAG--- 109
GALGP G P G G G+ P PG PG + + G
Sbjct: 384 GALGPSGLPGSTGEKGQKGEKGDGGIKGVPGK--PGRDGRPGEICVIGPKGQKGDPGFVG 441
Query: 110 -AGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPG-------VGLPGVYPGGVLP 161
GL G PG GL P PG + PG PG PG G+PG G P
Sbjct: 442 PEGLAGEPGPPGL-----PGPPG--IGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKP 494
Query: 162 GARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPG-VGPFGGPQPGVPLGYPIKAPKLPG 220
G PGV G P V P P F G+PG GP G P G P+ A PG
Sbjct: 495 GK--PGVKGEKGDP--CEVCPTLPEGFQNFVGLPGKPGPKGEP------GDPVPARGDPG 544
Query: 221 GYGLPYTTGK----LPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAA 276
G+ G+ G + + G +G G G A K G
Sbjct: 545 IQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLK---GEK 601
Query: 277 GVLPGVGGAGVPGVPGAIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG 335
G G AG PG PG + G GI G G P A + + A +P GP
Sbjct: 602 GNFGEAGPAGSPGPPGPV-GPAGIKGAKGEPCEPCPALSNLQDGDVRVVA--LP-GPSGE 657
Query: 336 PGVVGVPGAGVPGV-------GVPG----AGIPVVPG----AGIPG-AAVPGVVSP---- 375
G G PG G+PG G+ G AG P PG G PG + PGV P
Sbjct: 658 KGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPK 717
Query: 376 -------EAAAKAAAKAAKYGARPGV--GVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVP 426
A RPG G GVG G P G G+PGV G P
Sbjct: 718 GEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKP----GQPGLPGVQGPP 773
Query: 427 GVGGVPGVGGVPGVGI-SPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 485
G+ GV G G PG G+ P+ + A GL PG PG G +PGV A
Sbjct: 774 GLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGL-PGPRGPPGPTGEKGAQGSPGVKGAT 832
Query: 486 GVGVAPGVGVA--PG-------VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGI 536
G PG V+ PG G+ G G + + +Q G
Sbjct: 833 GPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGA 892
Query: 537 PGLGVG----------VGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGA--- 583
PGL +G G+PG GVPGL GVPG +PG A+ G+
Sbjct: 893 PGLWMGSSWQPGPQGPPGIPGPPGPPGVPGL---QGVPGNNGLPG--QPGLTAELGSLPI 947
Query: 584 -----------------AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 626
A PG L G G GIP GV G A + +A +
Sbjct: 948 EQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIP-GVPGLDNCAQCFLSLERPRAEEAR 1006
Query: 627 LVGAAGLGGLGVGGLGVPGVGGLGGI-----PPAAAAKAAKYGVAARPGF 671
+ G G VG G+PG GL G PP G PGF
Sbjct: 1007 GDNSEGDPGC-VGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGF 1055
Score = 108 bits (269), Expect = 2e-23
Identities = 168/552 (30%), Positives = 201/552 (36%), Gaps = 104/552 (18%)
Query: 28 GVPGAI-PGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGLGAFPA 84
G PG I P G PG V PG L L G G G G +P P G G
Sbjct: 1045 GPPGPIGPPGFPGAVGSPG--LPGLQGERGLTGLTGDKGEPGPPGQPG------------ 1090
Query: 85 VTFPGALVPGGVADAAA--AYKAAKAGAGLGGVPGVGGLGVSAAPSVP-GAVVPQPGAGV 141
+PGA P G+ Y + G G PG GL P+ P G PQ +G
Sbjct: 1091 --YPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGE 1148
Query: 142 K--------------------PGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGV 180
K PGKV G PG G R P G+ PG P G+
Sbjct: 1149 KGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGI 1208
Query: 181 KPKAPGVGGAFA--GIPGV----GPFGGPQPGVPLGYPIKA--------------PKLPG 220
+ A G+ G G PG+ GP G P P G+ K P PG
Sbjct: 1209 QGPA-GLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPG 1267
Query: 221 GYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGV-GPQAAAAAAAKA--AAKFGAGAAG 277
G P G+ P GP G G G G P G GP +A K A G AG
Sbjct: 1268 STGRPGAEGE-PGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAG 1326
Query: 278 VLPGVGGAGVPGVPGAIPGIGGIAG----------VGTPAAAAAAAAAAKAAKYG--AAA 325
+ G G PG PG PG G AG G P AA + + G A
Sbjct: 1327 LPGQPGPPGHPGPPGE-PGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRA 1385
Query: 326 GLVPGGPGFGP--GVVGVPG-AGVPG-VGVPG-AGIPVVPGAGIPGAA--------VPGV 372
G+ PGGPG G VG PG AG G G PG +G P +PG +PG+ +
Sbjct: 1386 GM-PGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPG--VPGSMGDMVNYDEIKRF 1442
Query: 373 VSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVP 432
+ E + A Y +R P A G PG G G PG G PG G+P
Sbjct: 1443 IRQEIIKMFDERMAYYTSRMQ-----FPMEMAAAPGRPG-PPGKDGAPGRPGAPGSPGLP 1496
Query: 433 GVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG 492
G G G P + K K + G+ G+ PG PG G G
Sbjct: 1497 GQIGREGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQ 1556
Query: 493 VGVAPGVGVAPG 504
G+ PG+ PG
Sbjct: 1557 QGI-PGIPGPPG 1567
Score = 100 bits (249), Expect = 5e-21
Identities = 146/455 (32%), Positives = 176/455 (38%), Gaps = 78/455 (17%)
Query: 25 RPG--GVPGAIPGGVPGGVFYPGA-GLGALGG--GALGPGGKPLKPVPGGLAGAGLGAGL 79
+PG G PG P G PG V PG G A G G GP G P P P G G AGL
Sbjct: 1157 QPGFPGPPG--PPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGL 1214
Query: 80 GAFPAVTFPGALVPGGVADAAAAYKAAKAGA----GLGGVPGVGG-LGVSAAPSVPGAVV 134
PG D A G G G PG+ G G P PG+
Sbjct: 1215 DGLDGKDGK----PGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGST- 1269
Query: 135 PQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGG----- 189
+PGA +PG + G PG PG V P PG PG P AG+ A G+ G
Sbjct: 1270 GRPGAEGEPGAMGPQGRPGP-PGHVGP----PGP---PGQPGPAGIS--AVGLKGDRGAT 1319
Query: 190 ---AFAGIPGV-GPFGGPQPGVPLGYPIKA-----PKLPGGYGLPYTTGKLPYGYGPGGV 240
AG+PG GP G P P G A P G YG P G P G G
Sbjct: 1320 GERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGD-PGAAGQKGQ 1378
Query: 241 AGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA-GVPGVPGAIPGIGG 299
AG G+AG P G G A + G A PG G+ G+PGVPG++ +
Sbjct: 1379 AGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGA---PGPSGSPGLPGVPGSMGDMVN 1435
Query: 300 IAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA-GVPGVGVPGA-GIP 357
+ + Y + P PG G PG G PG PGA G P
Sbjct: 1436 YDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGR--PGAPGSP 1493
Query: 358 VVPGA-------GIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGV----G 405
+PG G+PG +PG G + +G+G G+ G
Sbjct: 1494 GLPGQIGREGRQGLPGVRGLPGTK---------------GEKGDIGIGIAGENGLPGPPG 1538
Query: 406 AGGFPGFG-VGVGGIPGVAGVPGVGGVPGVGGVPG 439
G PG+G +G G G G+PG+ G PG G PG
Sbjct: 1539 PQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPG 1573
Score = 92.4 bits (228), Expect = 1e-18
Identities = 137/456 (30%), Positives = 166/456 (36%), Gaps = 71/456 (15%)
Query: 236 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 295
G G +GA G +G P TG Q K G G+ G G G PG I
Sbjct: 378 GEKGESGALGPSGLPGSTGEKGQ-----------KGEKGDGGIKGVPGKPGRDGRPGEIC 426
Query: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFG-PGVVGVPGAGVPG-VGVPG 353
IG G P A + G +PG PG G PG G PG G PG G G
Sbjct: 427 VIGPKGQKGDPGFVGPEGLAGEPGPPG-----LPGPPGIGLPGTPGDPG-GPPGPKGDKG 480
Query: 354 -AGIPVVPG-AGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPG 411
+GIP G G PG PGV + G + VG+ G P G G PG
Sbjct: 481 SSGIPGKEGPGGKPGK--PGVKGEKGDPCEVCPTLPEGFQNFVGLPGKP----GPKGEPG 534
Query: 412 FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGV 471
V G PG+ G+ G G P + VG LV G + VG
Sbjct: 535 DPVPARGDPGIQGIKGEKGEPCLSCSSVVGAQ--------------HLVSSTGASGDVG- 579
Query: 472 APGVGV--APGVGLAPGVGVAPGVGVAPGVGVAPG----IGPGGV-AAAAKSAAKVAAKA 524
+PG G+ PG PG+ G G +PG +GP G+ A + A +
Sbjct: 580 SPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALS 639
Query: 525 QLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA 584
L+ +PG G PG G G+PG AG G K K A
Sbjct: 640 NLQDGDVRVVALPGPSGEKGEPG-PPGFGLPGKQGKAGERGL----------KGQKGDAG 688
Query: 585 VPGVLGGLGALGGVGIPG--GVVG-AGPAAAAAAAKAAAKAAQFGLVGAAG-------LG 634
PG G G G G+ G GV G AGP A + Q + AG G
Sbjct: 689 NPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKG 748
Query: 635 GLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARPG 670
G G+G PG G G+P K GV PG
Sbjct: 749 EQGPEGVGRPGKPGQPGLPGVQGPPGLK-GVQGEPG 783
Score = 60.1 bits (144), Expect = 7e-09
Identities = 107/370 (28%), Positives = 134/370 (36%), Gaps = 72/370 (19%)
Query: 327 LVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVV--SPEAAAKAAAK 384
L P GP G G G+PG PG+ G GA V SP+A + A
Sbjct: 330 LAPSGPKGGKGERGLPGP-------PGS-------KGEKGARGNDCVRISPDAPLQCAE- 374
Query: 385 AAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGV------GGVPGVGGVP 438
G + G G +G G+PG G G GG+ GV G P
Sbjct: 375 ----GPKGEKGESG--------------ALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKP 416
Query: 439 GVGISPEAQAAAAAKAAK--YGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA 496
G P K K G V G+A G PG+ PG+GL PG PG
Sbjct: 417 GRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPG-PPGLPGPPGIGL-PGTPGDPGGPPG 474
Query: 497 P-----GVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIP-GLGVGVGVPGLGV 550
P G+ GPGG K K + + +P G VG+PG
Sbjct: 475 PKGDKGSSGIPGKEGPGG------KPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPG 528
Query: 551 GAGVPGLGVGA----GVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPG-GVV 605
G PG V A G+ G G + ++ GA ++ GA G VG PG G+
Sbjct: 529 PKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSSVVGA--QHLVSSTGASGDVGSPGFGLP 586
Query: 606 GAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP--PAAAAKAAKY 663
G A K + FG G AG G G +G G+ G G P P A +
Sbjct: 587 GLPGRAGVPGLK--GEKGNFGEAGPAGSPG-PPGPVGPAGIKGAKGEPCEPCPALSNLQD 643
Query: 664 G---VAARPG 670
G V A PG
Sbjct: 644 GDVRVVALPG 653
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 138 bits (347), Expect = 2e-32
Identities = 197/654 (30%), Positives = 223/654 (34%), Gaps = 83/654 (12%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGL 79
HP + G G G PGGV P G G +G G P P P G GL
Sbjct: 959 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--PIGERGHPGPPGPPG--EQGLPGAA 1014
Query: 80 GAFPAVTFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQP 137
G A PG P G++ D A + GL G G GL P P V P
Sbjct: 1015 GKEGAKGDPG---PQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1071
Query: 138 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV 197
G G +GLPG PG + P PG P G P G G AG GV
Sbjct: 1072 GERGSAGTAGPIGLPG------RPGPQGP-----PG-PAGEKGAPGEKGPQGP-AGRDGV 1118
Query: 198 -GPFGGPQPGVPLGYP--------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
GP G P P P G P I P G G G GP G+ G G G
Sbjct: 1119 QGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP----GPPGLQGPVGAPG 1174
Query: 249 YPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G G GP+ + + G G +G G+PG PG G + +G P
Sbjct: 1175 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1234
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIP 365
G P GP PG VG G GV G PG AG P PG AG+
Sbjct: 1235 PPGPRGPQGPNGADG------PQGP---PGSVGSVG-GVGEKGEPGEAGNPGPPGEAGVG 1284
Query: 366 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
G G + A A GA+ G G P G GFPG G G PG AG
Sbjct: 1285 GPK--GERGEKGEAGPPGAAGPPGAKGPPGDDG-PKGNPGPVGFPG-DPGPPGEPGPAGQ 1340
Query: 426 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 485
GVGG G G PG P A PG PG A G G
Sbjct: 1341 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGP-----PGKRGPPGAAGAEGRQGEKGAKGEA 1395
Query: 486 GVGVAPG-VGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 544
G PG G G A GP G+ + G+PG G
Sbjct: 1396 GAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGE--------------QGLPGAAGQDG 1441
Query: 545 VPGLGVGAGVPGLGVGAGVPGFGAVPGALA-----AAKAAKYGAAVPGVLGGLGALGGVG 599
PG G+PGL G G PG + + K +PG G GA G G
Sbjct: 1442 PPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGG 1501
Query: 600 IPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 653
IPG GP G G AG G G+PG G G P
Sbjct: 1502 IPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG----QKGDSGLPGPPGSPGPP 1551
Score = 136 bits (342), Expect = 7e-32
Identities = 220/742 (29%), Positives = 257/742 (34%), Gaps = 114/742 (15%)
Query: 25 RPG--GVPGAIPG-GVPGGVFYPGA-------GLGALGG-----GALGPGGKPLKPVPGG 69
+PG G PGA G G+PG PGA GL L G G GP G P P G
Sbjct: 587 KPGKRGRPGADGGRGMPGE---PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDG 643
Query: 70 LAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPS 128
+ G G P P L+ G G PG G+ GV P
Sbjct: 644 MRGEDGEIGPRGLPGEAGPRGLL---------------GPRGTPGAPGQPGMAGVDGPPG 688
Query: 129 VPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVL--PGARFP-GVGVLPGVPTGAGVKPK 183
G + PQ PG + G GLPG P G + PG + P G L G+P GA P
Sbjct: 689 PKGNMGPQGEPGPPGQQGNPGPQGLPG--PQGPIGPPGEKGPQGKPGLAGLP-GADGPPG 745
Query: 184 APGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPK----LPGGYGLPYTTGK-----LPYG 234
PG G +GP P P P+GYP P+ G GL + G+ P
Sbjct: 746 HPGKEGQSGEKGALGP---PGPQGPIGYP--GPRGVKGADGVRGLKGSKGEKGEDGFPGF 800
Query: 235 YGPGGVAGAAGKAGY--PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
G G+ G G+ G P G GP+ A +G AG +G G+PG PG
Sbjct: 801 KGDMGLKGDRGEVGQIGPRGED-GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPG 859
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVP 352
G G P A A A K G P GP G G G P
Sbjct: 860 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSG 919
Query: 353 GAGIPVVPGAGIP-----GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407
G G P PG P PG P G R G G T G G
Sbjct: 920 GDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQG-KTGPPGPG 978
Query: 408 GFPG--------FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
G G +G G PG G PG G+PG G G P Q + K GL
Sbjct: 979 GVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQ-GISGKDGPAGL 1037
Query: 460 --VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG----VGVAPGVGVAPGIGPGGVAAA 513
PG PG APG+ G PG +PG G A +G+ GP G
Sbjct: 1038 RGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGP 1097
Query: 514 AKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 573
A K AG G+ VG+PG AG PG G G PG
Sbjct: 1098 AGEKGAPGEKGPQGP-----AGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIG---EPGQ- 1148
Query: 574 AAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA--AAKAAAKAAQF-GLVGA 630
+K K PG G G +G GI GG GP K A F G G
Sbjct: 1149 KGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGP 1208
Query: 631 AGLGGL-----------GVGGLGVPGVGGLGGI-----------PPAAAAKAAKYGVAAR 668
GL GL VG +G PG G G PP + G
Sbjct: 1209 IGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGE 1268
Query: 669 PGFGLSPIFPGGACLGKACGRK 690
PG +P PG A +G G +
Sbjct: 1269 PGEAGNPGPPGEAGVGGPKGER 1290
Score = 107 bits (268), Expect = 3e-23
Identities = 198/676 (29%), Positives = 232/676 (34%), Gaps = 109/676 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P+ P G+ G P G+ G PG G GP G+P P GL G G
Sbjct: 458 PAGPAGIMG--PPGLQGPTGPPG------DPGDRGPPGRPGLPGADGLPGP---PGTMLM 506
Query: 83 PAVTFPGALVPGGVADAAAAYKAA---KAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGA 139
+ G G A A A +A L G PG GL
Sbjct: 507 LPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG---------------- 550
Query: 140 GVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
+PG V G G G PG + P GV PG PTG K PG G G+PG
Sbjct: 551 --RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGG-RGMPGEP 606
Query: 199 PFGGPQ-----PGVP--LGY-----PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK 246
G + PG+P G+ P P PG G+ G++ GP G+ G AG
Sbjct: 607 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEI----GPRGLPGEAGP 662
Query: 247 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVG 304
G +GP+ A + G G +G G PG PG PG G+ G
Sbjct: 663 RGL-----LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQ 717
Query: 305 TPAAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG 361
P PG GP PG+ G+PGA P G PG G G
Sbjct: 718 GPIGP-------------------PGEKGPQGKPGLAGLPGADGP-PGHPGKEGQSGEKG 757
Query: 362 A-GIPGAAVP-GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTY--GVGAGGFPGFGVGVG 417
A G PG P G P A G++ G G P + +G G G VG
Sbjct: 758 ALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRG-EVGQI 816
Query: 418 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 477
G G G G G G G PG P QA K VPG+ PG G
Sbjct: 817 GPRGEDGPEGPKGRAGPTGDPG----PSGQAGEKGKLG----VPGLPGYPGRQGPKGSTG 868
Query: 478 APGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGI 536
PG A G A GV PG G GP G A K K G G
Sbjct: 869 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK-----GTSGGDGP 923
Query: 537 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA----AAKAAKYGAAVPGVL--- 589
PG G G G PG G PG +PG K G PG +
Sbjct: 924 PGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGP 983
Query: 590 -GGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGG 648
G G G +G G GP AA K G G G+ G G G+ G G
Sbjct: 984 QGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD-GPAGLRGFPG 1042
Query: 649 LGGIPPAAAAKAAKYG 664
G+P A A K G
Sbjct: 1043 ERGLPGAQGAPGLKGG 1058
Score = 95.9 bits (237), Expect = 1e-19
Identities = 146/507 (28%), Positives = 180/507 (35%), Gaps = 90/507 (17%)
Query: 182 PKAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK---LPYGYGP 237
P P G PG+ GP G P G P + P LPG GLP G LP+ YG
Sbjct: 455 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFRYGG 513
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G PT + Q A A A A+ + G PG +
Sbjct: 514 DGSKG-------PT---ISAQEAQAQAILQQARIA--------------LRGPPGPMGLT 549
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPGVGVPG 353
G VG P ++ A + G P GP PG G PGA G+P G PG
Sbjct: 550 GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMP--GEPG 607
Query: 354 A-------GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
A G+P +PG G P+ G +G G+P G
Sbjct: 608 AKGDRGFDGLPGLPG----DKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLP----GE 659
Query: 407 GGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVA 466
G G +G G PG G PG+ GV G G G + P+ + PG
Sbjct: 660 AGPRGL-LGPRGTPGAPGQPGMAGVDGPPGPKG-NMGPQGEPGP----------PGQQGN 707
Query: 467 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQL 526
PG PG G G PG+ PG PG PG + + A
Sbjct: 708 PGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG-HPGKEGQSGEKGA-------- 758
Query: 527 RAAAGLGAGIPGLGVGVGVPG-LGV-GA-GVPGLGVGAGVPGFGAVPGALAAAKAAKYGA 583
G PG +G PG GV GA GV GL G G PG K
Sbjct: 759 -------LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPG-------FKGDM 804
Query: 584 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGV 643
+ G G +G +G G G G A + +A + G +G GL G G G
Sbjct: 805 GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGY-PGRQGP 863
Query: 644 PGVGGLGGIPPAAAAKAAKYGVAARPG 670
G G G P A K A+ GVA +PG
Sbjct: 864 KGSTGFPGFPGANGEKGAR-GVAGKPG 889
Score = 92.0 bits (227), Expect = 2e-18
Identities = 162/522 (31%), Positives = 181/522 (34%), Gaps = 120/522 (22%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
PG G P G PG V PG A G GP G P +P P G G G
Sbjct: 1053 PGLKGGEGPQGPPGPVGSPGERGSA---GTAGPIGLPGRPGPQGPPGPAGEKGA------ 1103
Query: 86 TFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVP--QPGAG 140
PG P G A D AG G PG G G P G+ + G
Sbjct: 1104 --PGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1161
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP----------GVGVLPGVPTGAGVK--PKAPGVG 188
PG VG PG+ G PG R G PG P G++ P PG
Sbjct: 1162 GPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEK 1221
Query: 189 GAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G + +GP G P P P G P A G G P + G + G G G G AG G
Sbjct: 1222 GENGDVGPMGPPGPPGPRGPQG-PNGAD---GPQGPPGSVGSVG-GVGEKGEPGEAGNPG 1276
Query: 249 YPTGTGVG--------------PQAAAAAAAKA-----AAKFGAGAAGV----------- 278
P GVG P AA AK K G G
Sbjct: 1277 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPG 1336
Query: 279 ---LPGVGGA----GVPGVPGAIPGIGGIAGVGTP--------AAAAAAAAAAKAAKYGA 323
GVGG G PG PG PG G AG P AA A K AK A
Sbjct: 1337 PAGQDGVGGDKGEDGDPGQPGP-PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEA 1395
Query: 324 AAGLVPGGPG-FGP-GVVGVPGA----GVPGV----GVPGA----------GIPVVPGA- 362
A PG G GP G G PG G+PG G+PGA G P +PG
Sbjct: 1396 GAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLK 1455
Query: 363 GIPGA-------AVPGVVSP--EAAAKAAAKAAKYGARPGV-GVGGIPTYG--VGAGGFP 410
G PG+ + G++ P E K PG G GGIP +G G P
Sbjct: 1456 GDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPP 1515
Query: 411 GF--------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G G G G G G+ G PG G PG I P
Sbjct: 1516 GLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQP 1557
Score = 61.2 bits (147), Expect = 3e-09
Identities = 89/310 (28%), Positives = 107/310 (34%), Gaps = 31/310 (10%)
Query: 392 PGVGVGGIPTYGVGAG--GFPGFG--VGVGGIPGVAGVPGVGGVPGVGGVPGV------- 440
PG+ V G P AG G PG G G PG G PG G+PG G+PG
Sbjct: 448 PGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLML 507
Query: 441 -----GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV 495
G + +A +A ++ +A + PG G+ PG PG
Sbjct: 508 PFRYGGDGSKGPTISAQEAQAQAILQQARIA--LRGPPG---PMGLTGRPGPVGGPGSSG 562
Query: 496 APGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGV 554
A G PG GP GV K + R A G G+PG G G G+
Sbjct: 563 AKGESGDPGPQGPRGVQGPPGPTGKPGKRG--RPGADGGRGMPGEPGAKGDRGFDGLPGL 620
Query: 555 PGLGVGAGVPGFGAVPG-----ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGP 609
PG G G PG + +PG G G LG G PG G
Sbjct: 621 PGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGM 680
Query: 610 AAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARP 669
A G G G G G G+PG G G PP K G+A P
Sbjct: 681 AGVDGPPGPKGNMGPQGEPGPPGQQG-NPGPQGLPGPQGPIG-PPGEKGPQGKPGLAGLP 738
Query: 670 GFGLSPIFPG 679
G P PG
Sbjct: 739 GADGPPGHPG 748
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 138 bits (347), Expect = 2e-32
Identities = 197/654 (30%), Positives = 223/654 (34%), Gaps = 83/654 (12%)
Query: 22 HPSRPG--GVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGL 79
HP + G G G PGGV P G G +G G P P P G GL
Sbjct: 908 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG--PIGERGHPGPPGPPG--EQGLPGAA 963
Query: 80 GAFPAVTFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQP 137
G A PG P G++ D A + GL G G GL P P V P
Sbjct: 964 GKEGAKGDPG---PQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1020
Query: 138 GAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGV 197
G G +GLPG PG + P PG P G P G G AG GV
Sbjct: 1021 GERGSAGTAGPIGLPG------RPGPQGP-----PG-PAGEKGAPGEKGPQGP-AGRDGV 1067
Query: 198 -GPFGGPQPGVPLGYP--------IKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
GP G P P P G P I P G G G GP G+ G G G
Sbjct: 1068 QGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP----GPPGLQGPVGAPG 1123
Query: 249 YPTGTGV-GPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPA 307
G G GP+ + + G G +G G+PG PG G + +G P
Sbjct: 1124 IAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPG 1183
Query: 308 AAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG-AGIP 365
G P GP PG VG G GV G PG AG P PG AG+
Sbjct: 1184 PPGPRGPQGPNGADG------PQGP---PGSVGSVG-GVGEKGEPGEAGNPGPPGEAGVG 1233
Query: 366 GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGV 425
G G + A A GA+ G G P G GFPG G G PG AG
Sbjct: 1234 GPK--GERGEKGEAGPPGAAGPPGAKGPPGDDG-PKGNPGPVGFPG-DPGPPGEPGPAGQ 1289
Query: 426 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 485
GVGG G G PG P A PG PG A G G
Sbjct: 1290 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGP-----PGKRGPPGAAGAEGRQGEKGAKGEA 1344
Query: 486 GVGVAPG-VGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 544
G PG G G A GP G+ + G+PG G
Sbjct: 1345 GAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGE--------------QGLPGAAGQDG 1390
Query: 545 VPGLGVGAGVPGLGVGAGVPGFGAVPGALA-----AAKAAKYGAAVPGVLGGLGALGGVG 599
PG G+PGL G G PG + + K +PG G GA G G
Sbjct: 1391 PPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGG 1450
Query: 600 IPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIP 653
IPG GP G G AG G G+PG G G P
Sbjct: 1451 IPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG----QKGDSGLPGPPGSPGPP 1500
Score = 136 bits (342), Expect = 7e-32
Identities = 220/742 (29%), Positives = 257/742 (34%), Gaps = 114/742 (15%)
Query: 25 RPG--GVPGAIPG-GVPGGVFYPGA-------GLGALGG-----GALGPGGKPLKPVPGG 69
+PG G PGA G G+PG PGA GL L G G GP G P P G
Sbjct: 536 KPGKRGRPGADGGRGMPGE---PGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDG 592
Query: 70 LAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGL-GVSAAPS 128
+ G G P P L+ G G PG G+ GV P
Sbjct: 593 MRGEDGEIGPRGLPGEAGPRGLL---------------GPRGTPGAPGQPGMAGVDGPPG 637
Query: 129 VPGAVVPQ--PGAGVKPGKVPGVGLPGVYPGGVL--PGARFP-GVGVLPGVPTGAGVKPK 183
G + PQ PG + G GLPG P G + PG + P G L G+P GA P
Sbjct: 638 PKGNMGPQGEPGPPGQQGNPGPQGLPG--PQGPIGPPGEKGPQGKPGLAGLP-GADGPPG 694
Query: 184 APGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPK----LPGGYGLPYTTGK-----LPYG 234
PG G +GP P P P+GYP P+ G GL + G+ P
Sbjct: 695 HPGKEGQSGEKGALGP---PGPQGPIGYP--GPRGVKGADGVRGLKGSKGEKGEDGFPGF 749
Query: 235 YGPGGVAGAAGKAGY--PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG 292
G G+ G G+ G P G GP+ A +G AG +G G+PG PG
Sbjct: 750 KGDMGLKGDRGEVGQIGPRGED-GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPG 808
Query: 293 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVP 352
G G P A A A K G P GP G G G P
Sbjct: 809 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSG 868
Query: 353 GAGIPVVPGAGIP-----GAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407
G G P PG P PG P G R G G T G G
Sbjct: 869 GDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQG-KTGPPGPG 927
Query: 408 GFPG--------FGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGL 459
G G +G G PG G PG G+PG G G P Q + K GL
Sbjct: 928 GVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQ-GISGKDGPAGL 986
Query: 460 --VPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPG----VGVAPGVGVAPGIGPGGVAAA 513
PG PG APG+ G PG +PG G A +G+ GP G
Sbjct: 987 RGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGP 1046
Query: 514 AKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGAL 573
A K AG G+ VG+PG AG PG G G PG
Sbjct: 1047 AGEKGAPGEKGPQGP-----AGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIG---EPGQ- 1097
Query: 574 AAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAA--AAKAAAKAAQF-GLVGA 630
+K K PG G G +G GI GG GP K A F G G
Sbjct: 1098 KGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGP 1157
Query: 631 AGLGGL-----------GVGGLGVPGVGGLGGI-----------PPAAAAKAAKYGVAAR 668
GL GL VG +G PG G G PP + G
Sbjct: 1158 IGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGE 1217
Query: 669 PGFGLSPIFPGGACLGKACGRK 690
PG +P PG A +G G +
Sbjct: 1218 PGEAGNPGPPGEAGVGGPKGER 1239
Score = 107 bits (268), Expect = 3e-23
Identities = 198/676 (29%), Positives = 232/676 (34%), Gaps = 109/676 (16%)
Query: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAF 82
P+ P G+ G P G+ G PG G GP G+P P GL G G
Sbjct: 407 PAGPAGIMG--PPGLQGPTGPPG------DPGDRGPPGRPGLPGADGLPGP---PGTMLM 455
Query: 83 PAVTFPGALVPGGVADAAAAYKAA---KAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGA 139
+ G G A A A +A L G PG GL
Sbjct: 456 LPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG---------------- 499
Query: 140 GVKPGKVPGVGLPGVYPGGVLPGARFP-GVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVG 198
+PG V G G G PG + P GV PG PTG K PG G G+PG
Sbjct: 500 --RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGG-RGMPGEP 555
Query: 199 PFGGPQ-----PGVP--LGY-----PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK 246
G + PG+P G+ P P PG G+ G++ GP G+ G AG
Sbjct: 556 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEI----GPRGLPGEAGP 611
Query: 247 AGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG--AIPGIGGIAGVG 304
G +GP+ A + G G +G G PG PG PG G+ G
Sbjct: 612 RGL-----LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQ 666
Query: 305 TPAAAAAAAAAAKAAKYGAAAGLVPG--GPGFGPGVVGVPGAGVPGVGVPG-AGIPVVPG 361
P PG GP PG+ G+PGA P G PG G G
Sbjct: 667 GPIGP-------------------PGEKGPQGKPGLAGLPGADGP-PGHPGKEGQSGEKG 706
Query: 362 A-GIPGAAVP-GVVSPEAAAKAAAKAAKYGARPGVGVGGIPTY--GVGAGGFPGFGVGVG 417
A G PG P G P A G++ G G P + +G G G VG
Sbjct: 707 ALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRG-EVGQI 765
Query: 418 GIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV 477
G G G G G G G PG P QA K VPG+ PG G
Sbjct: 766 GPRGEDGPEGPKGRAGPTGDPG----PSGQAGEKGKLG----VPGLPGYPGRQGPKGSTG 817
Query: 478 APGVGLAPGVGVAPGVGVAPGV-GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGI 536
PG A G A GV PG G GP G A K K G G
Sbjct: 818 FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK-----GTSGGDGP 872
Query: 537 PGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALA----AAKAAKYGAAVPGVL--- 589
PG G G G PG G PG +PG K G PG +
Sbjct: 873 PGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGP 932
Query: 590 -GGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGG 648
G G G +G G GP AA K G G G+ G G G+ G G
Sbjct: 933 QGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD-GPAGLRGFPG 991
Query: 649 LGGIPPAAAAKAAKYG 664
G+P A A K G
Sbjct: 992 ERGLPGAQGAPGLKGG 1007
Score = 95.9 bits (237), Expect = 1e-19
Identities = 146/507 (28%), Positives = 180/507 (35%), Gaps = 90/507 (17%)
Query: 182 PKAPGVGGAFAGIPGV-GPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGK---LPYGYGP 237
P P G PG+ GP G P G P + P LPG GLP G LP+ YG
Sbjct: 404 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFRYGG 462
Query: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
G G PT + Q A A A A+ + G PG +
Sbjct: 463 DGSKG-------PT---ISAQEAQAQAILQQARIA--------------LRGPPGPMGLT 498
Query: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGA----GVPGVGVPG 353
G VG P ++ A + G P GP PG G PGA G+P G PG
Sbjct: 499 GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMP--GEPG 556
Query: 354 A-------GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGA 406
A G+P +PG G P+ G +G G+P G
Sbjct: 557 AKGDRGFDGLPGLPG----DKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLP----GE 608
Query: 407 GGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVA 466
G G +G G PG G PG+ GV G G G + P+ + PG
Sbjct: 609 AGPRGL-LGPRGTPGAPGQPGMAGVDGPPGPKG-NMGPQGEPGP----------PGQQGN 656
Query: 467 PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQL 526
PG PG G G PG+ PG PG PG + + A
Sbjct: 657 PGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG-HPGKEGQSGEKGA-------- 707
Query: 527 RAAAGLGAGIPGLGVGVGVPG-LGV-GA-GVPGLGVGAGVPGFGAVPGALAAAKAAKYGA 583
G PG +G PG GV GA GV GL G G PG K
Sbjct: 708 -------LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPG-------FKGDM 753
Query: 584 AVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGV 643
+ G G +G +G G G G A + +A + G +G GL G G G
Sbjct: 754 GLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGY-PGRQGP 812
Query: 644 PGVGGLGGIPPAAAAKAAKYGVAARPG 670
G G G P A K A+ GVA +PG
Sbjct: 813 KGSTGFPGFPGANGEKGAR-GVAGKPG 838
Score = 92.0 bits (227), Expect = 2e-18
Identities = 162/522 (31%), Positives = 181/522 (34%), Gaps = 120/522 (22%)
Query: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
PG G P G PG V PG A G GP G P +P P G G G
Sbjct: 1002 PGLKGGEGPQGPPGPVGSPGERGSA---GTAGPIGLPGRPGPQGPPGPAGEKGA------ 1052
Query: 86 TFPGALVPGGVA--DAAAAYKAAKAGAGLGGVPGVGG-LGVSAAPSVPGAVVP--QPGAG 140
PG P G A D AG G PG G G P G+ + G
Sbjct: 1053 --PGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP 1110
Query: 141 VKPGKVPGVGLPGVYPGGVLPGARFP----------GVGVLPGVPTGAGVK--PKAPGVG 188
PG VG PG+ G PG R G PG P G++ P PG
Sbjct: 1111 GPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEK 1170
Query: 189 GAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAG 248
G + +GP G P P P G P A G G P + G + G G G G AG G
Sbjct: 1171 GENGDVGPMGPPGPPGPRGPQG-PNGAD---GPQGPPGSVGSVG-GVGEKGEPGEAGNPG 1225
Query: 249 YPTGTGVG--------------PQAAAAAAAKA-----AAKFGAGAAGV----------- 278
P GVG P AA AK K G G
Sbjct: 1226 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPG 1285
Query: 279 ---LPGVGGA----GVPGVPGAIPGIGGIAGVGTP--------AAAAAAAAAAKAAKYGA 323
GVGG G PG PG PG G AG P AA A K AK A
Sbjct: 1286 PAGQDGVGGDKGEDGDPGQPGP-PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEA 1344
Query: 324 AAGLVPGGPG-FGP-GVVGVPGA----GVPGV----GVPGA----------GIPVVPGA- 362
A PG G GP G G PG G+PG G+PGA G P +PG
Sbjct: 1345 GAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLK 1404
Query: 363 GIPGA-------AVPGVVSP--EAAAKAAAKAAKYGARPGV-GVGGIPTYG--VGAGGFP 410
G PG+ + G++ P E K PG G GGIP +G G P
Sbjct: 1405 GDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPP 1464
Query: 411 GF--------GVGVGGIPGVAGVPGVGGVPGVGGVPGVGISP 444
G G G G G G+ G PG G PG I P
Sbjct: 1465 GLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQP 1506
Score = 61.2 bits (147), Expect = 3e-09
Identities = 89/310 (28%), Positives = 107/310 (34%), Gaps = 31/310 (10%)
Query: 392 PGVGVGGIPTYGVGAG--GFPGFG--VGVGGIPGVAGVPGVGGVPGVGGVPGV------- 440
PG+ V G P AG G PG G G PG G PG G+PG G+PG
Sbjct: 397 PGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLML 456
Query: 441 -----GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV 495
G + +A +A ++ +A + PG G+ PG PG
Sbjct: 457 PFRYGGDGSKGPTISAQEAQAQAILQQARIA--LRGPPG---PMGLTGRPGPVGGPGSSG 511
Query: 496 APGVGVAPG-IGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGV 554
A G PG GP GV K + R A G G+PG G G G+
Sbjct: 512 AKGESGDPGPQGPRGVQGPPGPTGKPGKRG--RPGADGGRGMPGEPGAKGDRGFDGLPGL 569
Query: 555 PGLGVGAGVPGFGAVPG-----ALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGP 609
PG G G PG + +PG G G LG G PG G
Sbjct: 570 PGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGM 629
Query: 610 AAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGGLGGIPPAAAAKAAKYGVAARP 669
A G G G G G G+PG G G PP K G+A P
Sbjct: 630 AGVDGPPGPKGNMGPQGEPGPPGQQG-NPGPQGLPGPQGPIG-PPGEKGPQGKPGLAGLP 687
Query: 670 GFGLSPIFPG 679
G P PG
Sbjct: 688 GADGPPGHPG 697
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.144 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,982,538
Number of Sequences: 37866
Number of extensions: 3041116
Number of successful extensions: 60336
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 1039
Number of HSP's that attempted gapping in prelim test: 13835
Number of HSP's gapped (non-prelim): 13600
length of query: 692
length of database: 18,247,518
effective HSP length: 109
effective length of query: 583
effective length of database: 14,120,124
effective search space: 8232032292
effective search space used: 8232032292
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.