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Search of human proteins with 118498339
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118498339 EMI domain containing 2 [Homo sapiens]
(439 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118498339 EMI domain containing 2 [Homo sapiens] 932 0.0
gi|50511941 EMI domain containing 1 [Homo sapiens] 297 1e-80
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 149 4e-36
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 148 8e-36
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 147 2e-35
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 147 2e-35
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 147 2e-35
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 146 3e-35
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 145 9e-35
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 145 9e-35
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 144 1e-34
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 144 2e-34
gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s... 142 6e-34
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 142 6e-34
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 142 6e-34
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 142 6e-34
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 142 6e-34
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 140 2e-33
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 140 3e-33
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 140 3e-33
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 140 3e-33
gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s... 140 3e-33
gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens] 140 3e-33
gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens] 140 3e-33
gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] 139 4e-33
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 139 7e-33
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 139 7e-33
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 139 7e-33
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 139 7e-33
gi|11386161 alpha 2 type IX collagen [Homo sapiens] 138 9e-33
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 932 bits (2410), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MKLALLLPWACCCLCGSALATGFLYPFSAAALQQHGYPEPGAGSPGSGYASRRHWCHHTV 60
MKLALLLPWACCCLCGSALATGFLYPFSAAALQQHGYPEPGAGSPGSGYASRRHWCHHTV
Sbjct: 1 MKLALLLPWACCCLCGSALATGFLYPFSAAALQQHGYPEPGAGSPGSGYASRRHWCHHTV 60
Query: 61 TRTVSCQVQNGSETVVQRVYQSCRWPGPCANLVRTLIRPTYRVSYRTVTVLEWRCCPGFT 120
TRTVSCQVQNGSETVVQRVYQSCRWPGPCANLVRTLIRPTYRVSYRTVTVLEWRCCPGFT
Sbjct: 61 TRTVSCQVQNGSETVVQRVYQSCRWPGPCANLVRTLIRPTYRVSYRTVTVLEWRCCPGFT 120
Query: 121 GSNCDEECMNCTRLSDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNEDFLP 180
GSNCDEECMNCTRLSDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNEDFLP
Sbjct: 121 GSNCDEECMNCTRLSDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNEDFLP 180
Query: 181 DAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP 240
DAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP
Sbjct: 181 DAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP 240
Query: 241 RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG
Sbjct: 241 RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
Query: 301 VPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGE 360
VPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGE
Sbjct: 301 VPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGE 360
Query: 361 GVQQLREALKILAERVLILEHMIGIHDPLASPEGGSGQDAALRANLKMKRGGAQPDGVLA 420
GVQQLREALKILAERVLILEHMIGIHDPLASPEGGSGQDAALRANLKMKRGGAQPDGVLA
Sbjct: 361 GVQQLREALKILAERVLILEHMIGIHDPLASPEGGSGQDAALRANLKMKRGGAQPDGVLA 420
Query: 421 ALLGPDPGQKSVDQASSRK 439
ALLGPDPGQKSVDQASSRK
Sbjct: 421 ALLGPDPGQKSVDQASSRK 439
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 297 bits (760), Expect = 1e-80
Identities = 192/464 (41%), Positives = 234/464 (50%), Gaps = 104/464 (22%)
Query: 9 WACCCLCGSALATGFLYPFSAAALQQHGYPEPGAGSPGSGYASRRHWCHHTVTRTVSCQV 68
WA CL G L P AA P ++ RR+WC + VTRT+SC V
Sbjct: 7 WALLCL-------GLLLPGGGAAWSIGAAP----------FSGRRNWCSYVVTRTISCHV 49
Query: 69 QNGSETVVQRVYQSCRWPGPC-ANLVRTLIRPTYRVSYRTVTVLEWRCCPGFTGSNCDEE 127
QNG T +QRV Q+C WP C + RT++RPTY+V Y+ VT EWRCCPG +G +C+E
Sbjct: 50 QNG--TYLQRVLQNCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEV 107
Query: 128 ----------------------------CMNCTRLSDMSERLTTLEAKVLLLEAAERPSS 159
C+NC+++S+++ERL LEAK+ +L E+P
Sbjct: 108 AASSASLEPMWSGSTMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVP 167
Query: 160 PDNDLPA-PESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKG 218
P PA PE P W P A P G G GP GP G GS+G
Sbjct: 168 PT---PATPEDPAPLWGP-------PPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRG 217
Query: 219 DRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQP 278
G G GP GPPG G G G PGE G PGPPGPPGP G P+P P A S
Sbjct: 218 PMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPG--PPAPVGPPHARIS--- 272
Query: 279 PTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGS---------- 328
+GD L++ +T GP GPPGPPGP GP GPPGP G PGS
Sbjct: 273 ----QHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPT 328
Query: 329 --------------QGLAGE---RGTVGPSGEPGVKGEEGEKAATAEGEGVQQLREALKI 371
+GL GE +G+ G GEPG KG+ GEK+ GEG+ QLREALKI
Sbjct: 329 GPKGISGHPGEKGERGLRGEPGPQGSAGQRGEPGPKGDPGEKSHW--GEGLHQLREALKI 386
Query: 372 LAERVLILEHMIGIHDP-LASPEG--GSGQDAALRANLKMKRGG 412
LAERVLILE MIG+++P L S G G+G + LR KRGG
Sbjct: 387 LAERVLILETMIGLYEPELGSGAGPAGTGTPSLLRG----KRGG 426
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 149 bits (377), Expect = 4e-36
Identities = 96/240 (40%), Positives = 107/240 (44%), Gaps = 52/240 (21%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHP--VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQ 222
P P P E P +A P P +R TGP GP G G PG G PG KG+RG
Sbjct: 770 PGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGA 829
Query: 223 TGEKGPAGPPGLLGPPG------------------------------PRGLPGEMGRPGP 252
GEKG GPPG+ GPPG RGLPG G G
Sbjct: 830 PGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGN 889
Query: 253 PGPPGPAGNPG----PSPNSPQGALYSL----------QPPTDKDNGDSRLASAIVDTVL 298
PGPPGP+G+PG P P GA S QP G A +
Sbjct: 890 PGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGI 949
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGT------PGSQGLAGERGTVGPSGEPGVKGEEGE 352
AG+ G RG GPPG PGPRG PGP G PG+ GL+GERG GP G PG+ G GE
Sbjct: 950 AGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGE 1009
Score = 146 bits (368), Expect = 4e-35
Identities = 81/166 (48%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG+ G GP GPPG G G G+ GP GP GL G PG G PGE G+PG PGP
Sbjct: 603 GPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPK 662
Query: 257 GPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGP-- 313
G AG PG P GA PP LAG PG RG GPPGP
Sbjct: 663 GDAGAPGAPGGKGDAGAPGERGPPG-----------------LAGAPGLRGGAGPPGPEG 705
Query: 314 ----PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
GP GPPG GTPG QG+ GERG +G G G KGE G A
Sbjct: 706 GKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGA 751
Score = 138 bits (348), Expect = 9e-33
Identities = 85/192 (44%), Positives = 90/192 (46%), Gaps = 45/192 (23%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG----PAGP-----------PGL 234
P R P GP G PG+ GP G G PG G RG GE G P GP PG
Sbjct: 488 PGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGS 547
Query: 235 LGPPGPRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLA 290
G PGP G GE GRPGPPGP GP G PG P P GA P + + G
Sbjct: 548 DGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGA-----PGKNGERGGP--- 599
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP---------PGTPGSQGLAGERGTVGPS 341
G PGP+GPPG G GP+GPPGP G PG QGL G GT GP
Sbjct: 600 ---------GGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPP 650
Query: 342 GEPGVKGEEGEK 353
GE G GE G K
Sbjct: 651 GENGKPGEPGPK 662
Score = 137 bits (345), Expect = 2e-32
Identities = 104/261 (39%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 193 RRPTGPAGPPGQTGPPGP------------AGPPGSKGDRGQTGEKGPAGPPGLLGP--- 237
R PTGP GPPG G PG AGP GS G+RG+TG GPAG PG G
Sbjct: 761 RGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGE 820
Query: 238 ---PGPRGLPGEMGRPGPPGPPGPAGNPGPS-PNSPQGALYSLQPPTDKDNGDSRLASAI 293
G RG PGE G GPPG GP G GP+ P PQG P G A
Sbjct: 821 PGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSP-----GGPGAAGFP 875
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
L G PG G PGPPGP G G GPPG G+ G G G GP G+ G GE+G
Sbjct: 876 GARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSP 935
Query: 354 AATAEGEGVQQLREALKILAERVLILEHMIGIHDPLAS--PEGGSGQDAALRAN-LKMKR 410
A L A I R L G+ P S P+G G+ AN L +R
Sbjct: 936 GAQGPPGAPGPLGIA-GITGARG--LAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGER 992
Query: 411 GGAQPDGV--LAALLGPDPGQ 429
G P G+ LA G +PG+
Sbjct: 993 GPPGPQGLPGLAGTAG-EPGR 1012
Score = 137 bits (344), Expect = 3e-32
Identities = 83/197 (42%), Positives = 90/197 (45%), Gaps = 36/197 (18%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGP---------------PGPAGPPGSKGDRGQTGEKGP 228
P A VP + P GP GP G GP PG AGP GS G+RG+TG GP
Sbjct: 749 PGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGP 808
Query: 229 AGPPGLLGP------PGPRGLPGEMGRPGPPGPPGPAGNPGPS-PNSPQGALYSLQPPTD 281
AG PG G G RG PGE G GPPG GP G GP+ P PQG P
Sbjct: 809 AGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGG 868
Query: 282 KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
AG PG RG PGPPG G GPPGP G+PG G G G G
Sbjct: 869 PG--------------AAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAP 914
Query: 342 GEPGVKGEEGEKAATAE 358
G PGV G +G+ E
Sbjct: 915 GSPGVSGPKGDAGQPGE 931
Score = 135 bits (339), Expect = 1e-31
Identities = 83/199 (41%), Positives = 91/199 (45%), Gaps = 33/199 (16%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP------GPRG 242
+P P G G PG+ GP G AG PG+ G +G G G GPPGL G P GP G
Sbjct: 643 LPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPG 702
Query: 243 LPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G G GPPGPPG AG PG +G L S P DK A + G
Sbjct: 703 PEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGV-----PGK 757
Query: 302 PGPRGPPGPPGPPGPRGPPGP---------PGTPGSQGLAGERGTVGP------------ 340
GPRGP GP GPPGP G PG PG G +G GERG GP
Sbjct: 758 DGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQ 817
Query: 341 SGEPGVKGEEGEKAATAEG 359
+GEPG KGE G EG
Sbjct: 818 NGEPGGKGERGAPGEKGEG 836
Score = 134 bits (336), Expect = 2e-31
Identities = 76/169 (44%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G G PG G PG G PG KGDRG+ G G G PG GPPGP G G+ G G GP
Sbjct: 1011 GRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPA 1070
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIV-DTVLAGVPGPRGPPGP----- 310
GPAG PGP+ +GA P DK R A+ I G PG G PGP
Sbjct: 1071 GPAGAPGPA--GSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQG 1128
Query: 311 ----PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PGP GPRGP GP G PG G +G G +GP G G +GE G + +
Sbjct: 1129 AIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGS 1177
Score = 131 bits (329), Expect = 1e-30
Identities = 80/195 (41%), Positives = 94/195 (48%), Gaps = 38/195 (19%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKG---------DRGQTGEKGPAGPPGLLGPPGPRGLPGEM 247
GPAGPPG GPPG +G PGS G + GQ G GP GPPG +GP GP G GE
Sbjct: 174 GPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGES 233
Query: 248 GRPGPPGP---PGPAGNPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG-- 300
GRPG PG PGP G GP+ P P + + + G++ + L G
Sbjct: 234 GRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGEN 293
Query: 301 -VPGPRGP---------PGPPGPPGPR------------GPPGPPGTPGSQGLAGERGTV 338
PGP GP PG PG G R GPPGPPGT G G G +G V
Sbjct: 294 GAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEV 353
Query: 339 GPSGEPGVKGEEGEK 353
GP+G PG G G++
Sbjct: 354 GPAGSPGSNGAPGQR 368
Score = 128 bits (321), Expect = 1e-29
Identities = 76/174 (43%), Positives = 83/174 (47%), Gaps = 37/174 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLG------PPGPRGLPGEMGRP 250
G G PG GPPGP GP G GDRG++G GPAG PG G P GPRG GE G
Sbjct: 1041 GAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGER 1100
Query: 251 GP---------PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G PG PG G+PGP+ QGA+ S P AG
Sbjct: 1101 GAAGIKGHRGFPGNPGAPGSPGPA--GQQGAIGSPGP--------------------AGP 1138
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
GP GP GPPG G G PGP G PG +G GERG+ G G PG G G A
Sbjct: 1139 RGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGA 1192
Score = 127 bits (320), Expect = 2e-29
Identities = 74/166 (44%), Positives = 83/166 (50%), Gaps = 25/166 (15%)
Query: 198 PAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPG 257
P P T PP GP G KGD GPPG+ G G G+PG+ G PG PGPPG
Sbjct: 89 PQPPTAPTRPPNGQGPQGPKGD---------PGPPGIPGRNGDPGIPGQPGSPGSPGPPG 139
Query: 258 PAGN--PGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG 315
+ GP SPQ Y ++ S + LAG PGP GPPGPPGPPG
Sbjct: 140 ICESCPTGPQNYSPQYDSYDVK-------------SGVAVGGLAGYPGPAGPPGPPGPPG 186
Query: 316 PRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKA-ATAEGE 360
G PG PG+PG QG GE G GPSG PG G G A +GE
Sbjct: 187 TSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGE 232
Score = 125 bits (313), Expect = 1e-28
Identities = 76/192 (39%), Positives = 85/192 (44%), Gaps = 45/192 (23%)
Query: 197 GPAGPPGQTGPPG---------PAGPPGSKGDRGQTG---------EKGPAGPPGLLGPP 238
GP GPPG G PG G PG KGD+G+ G + GP GP G +GPP
Sbjct: 711 GPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPP 770
Query: 239 GPRGLPGEMGRPGPP------------------GPPGPAGNPG-PSPNSPQGALYSLQPP 279
GP G PG+ G G P GPPGPAG PG P N G P
Sbjct: 771 GPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAP 830
Query: 280 TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
+K G +AG PG GP GPPGP G +G G PG PG+ G G RG G
Sbjct: 831 GEKGEGG--------PPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPG 882
Query: 340 PSGEPGVKGEEG 351
P G G G G
Sbjct: 883 PPGSNGNPGPPG 894
Score = 123 bits (309), Expect = 3e-28
Identities = 74/181 (40%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL---G 236
P P ++ P QR GP G G GPPGP G GS G +G+ G G G PGL+ G
Sbjct: 355 PAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414
Query: 237 PPGP---RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAI 293
PPGP G PG G G PG G G PGP + + + +D D
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGS----- 469
Query: 294 VDTVLAGVPGPRGPPGPP---GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
G PG G PG G PG RGP GP G PG +G AGERG GP+G G GE
Sbjct: 470 -----PGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEP 524
Query: 351 G 351
G
Sbjct: 525 G 525
Score = 121 bits (304), Expect = 1e-27
Identities = 72/165 (43%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGD---RGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
P GP G PG+ G PG G G++G+ RG G+ GP GPPG G PG G GE+G G
Sbjct: 298 PMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAG 357
Query: 252 PPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PG G G G P P GA PP + + G GP G PG
Sbjct: 358 SPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGK-----------GEMGPAGIPGA 406
Query: 311 PGPPGPRGPPGPP---GTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
PG G RGPPGP G PG +G AGE G G GEPG +GE GE
Sbjct: 407 PGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGE 451
Score = 121 bits (303), Expect = 1e-27
Identities = 74/171 (43%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR---PGPP 253
G G GQ GPPGP G G G G GE GPAG PG G PG RG PG G GPP
Sbjct: 324 GARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPP 383
Query: 254 GPPGPAGNPGPS--------PNSPQGALYSLQPPTDKD-NGDSRLASAIVDTVLAGVPGP 304
GPPG G+PG P +P G + + PP NG L AG PG
Sbjct: 384 GPPGINGSPGGKGEMGPAGIPGAP-GLMGARGPPGPAGANGAPGLRGG------AGEPGK 436
Query: 305 RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G G PGP G RG G PG PG++G G+ G+ G G G+ G GE+ A
Sbjct: 437 NGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGA 487
Score = 121 bits (303), Expect = 1e-27
Identities = 79/183 (43%), Positives = 88/183 (48%), Gaps = 32/183 (17%)
Query: 195 PTGPAGPPGQTGPPGPAG---PPGS------KGDRGQTGEKGPAG---PPGLLGPPGPRG 242
P GP+G PG+ GPPGPAG PGS KGD GQ GEKG G PPG GP G G
Sbjct: 892 PPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAG 951
Query: 243 LPGEMGRPGPPGPPGPAGNPGPS-----PNSPQGALYSLQPPTDKDNGDSRLASAIVDTV 297
+ G G GPPG PGP G+PGP P S + G LA
Sbjct: 952 ITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGT----- 1006
Query: 298 LAGVPGPRGPP---------GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
AG PG G P G PG G RG G PG PG+ G G G VGP+G+ G +G
Sbjct: 1007 -AGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRG 1065
Query: 349 EEG 351
E G
Sbjct: 1066 ESG 1068
Score = 119 bits (299), Expect = 4e-27
Identities = 75/182 (41%), Positives = 85/182 (46%), Gaps = 26/182 (14%)
Query: 197 GPAGPPGQTGPPG---------PAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEM 247
GP GPPG G PG PAG PGS G GQ GE GP G G GPPGP PG
Sbjct: 333 GPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGP---PGIN 389
Query: 248 GRPGPPGPPGPAGNPG----------PSPNSPQGAL----YSLQPPTDKDNGDSRLASAI 293
G PG G GPAG PG P P GA + +P + G+
Sbjct: 390 GSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGER 449
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
+ + GVPG +G G G PG G G PG G +G G RG GP+G PG KG GE+
Sbjct: 450 GEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGER 509
Query: 354 AA 355
A
Sbjct: 510 GA 511
Score = 117 bits (293), Expect = 2e-26
Identities = 81/211 (38%), Positives = 91/211 (43%), Gaps = 38/211 (18%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAG-----PPGSKGD 219
P + PP P P +P + G G PG G PGP G P G +
Sbjct: 92 PTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNY 151
Query: 220 R---------------GQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGP 264
G G GPAGPPG GPPG G PG G PG GPPG G GP
Sbjct: 152 SPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGP 211
Query: 265 S-PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGP---P 320
S P P GA+ P KD G+S G PG G G PGPPG +GP P
Sbjct: 212 SGPPGPPGAI-GPSGPAGKD-GES------------GRPGRPGERGLPGPPGIKGPAGIP 257
Query: 321 GPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G PG G +G G G G +G PG+KGE G
Sbjct: 258 GFPGMKGHRGFDGRNGEKGETGAPGLKGENG 288
Score = 115 bits (289), Expect = 6e-26
Identities = 80/206 (38%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 156 RPSSP-DNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGP------- 207
RP P + LP P P IP + R G G G+TG
Sbjct: 235 RPGRPGERGLPGPPGIKG-------PAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287
Query: 208 --PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPS 265
PG G PG G RG GE+G G PG G G G G G+PGPPGPPG AG PG S
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPG-S 346
Query: 266 PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGT 325
P GA + P + G PG RG PGP G G +GPPGPPG
Sbjct: 347 P----GAKGEVGPAGSPGSN--------------GAPGQRGEPGPQGHAGAQGPPGPPGI 388
Query: 326 PGSQGLAGERGTVGPSGEPGVKGEEG 351
GS G GE G G G PG+ G G
Sbjct: 389 NGSPGGKGEMGPAGIPGAPGLMGARG 414
Score = 112 bits (281), Expect = 5e-25
Identities = 81/210 (38%), Positives = 93/210 (44%), Gaps = 39/210 (18%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLG 236
P IP A + R P GPAG G G G AG PG +KG+ G GE+G AG PG+ G
Sbjct: 400 PAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPG 459
Query: 237 P------------PGPRGLPG---EMGRPGPPGPPGPAGNPG----------PSPNSPQG 271
PG GLPG E G PG GP GP G PG P P P+G
Sbjct: 460 AKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRG 519
Query: 272 ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGL 331
A + +P D G + G+PG G PG G PGP G G G PG G
Sbjct: 520 A--AGEPGRDGVPGGPGMR---------GMPGSPGGPGSDGKPGPPGSQGESGRPGPPGP 568
Query: 332 AGERGTVGPSGEPGVKGEEGEKAATAEGEG 361
+G RG G G PG KG +G E G
Sbjct: 569 SGPRGQPGVMGFPGPKGNDGAPGKNGERGG 598
Score = 102 bits (253), Expect = 9e-22
Identities = 77/247 (31%), Positives = 94/247 (38%), Gaps = 83/247 (33%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG--------------------------- 227
P GPAG PG G G GP G +GD+G+TGE+G
Sbjct: 1069 PAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQG 1128
Query: 228 ------PAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTD 281
PAGP G +GP GP G G G PGP GPPGP GN
Sbjct: 1129 AIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGN-------------------- 1168
Query: 282 KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
G RG G PG PG GPPGPPG PG G VG +
Sbjct: 1169 --------------------RGERGSEGSPGHPGQPGPPGPPGAPGPC-----CGGVGAA 1203
Query: 342 GEPGVKGEEGEKAATAEGEGVQQLREALKILAERVLI-LEHMIGIHDPLASPEGGSGQDA 400
G+ GE+ A G+ KI + ++ L+ + G + L SP+G A
Sbjct: 1204 AIAGIGGEKAGGFAPYYGDEPMD----FKINTDEIMTSLKSVNGQIESLISPDGSRKNPA 1259
Query: 401 ALRANLK 407
+LK
Sbjct: 1260 RNCRDLK 1266
Score = 38.5 bits (88), Expect = 0.012
Identities = 23/69 (33%), Positives = 27/69 (39%)
Query: 283 DNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSG 342
D+G I D P P P G P+ P P P QG G +G GP G
Sbjct: 56 DSGSVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPG 115
Query: 343 EPGVKGEEG 351
PG G+ G
Sbjct: 116 IPGRNGDPG 124
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 148 bits (374), Expect = 8e-36
Identities = 91/228 (39%), Positives = 107/228 (46%), Gaps = 35/228 (15%)
Query: 157 PSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS 216
P P PA + PP D D P P GP+GPPG+ GPPGPAGP G
Sbjct: 1347 PGPPGEPGPAGQDGPPGDKGD---DGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGR 1403
Query: 217 KGDRGQTGEKGPAGPPGLLGPPGP------------RGLPGEMGRPGPPGPPGPAGNPGP 264
+G++G GE G GPPG GP GP RG+PG +G G PG PGP G PGP
Sbjct: 1404 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1463
Query: 265 --SPNSP--------------QGALYSLQPPTDK-DNGDSRL---ASAIVDTVLAGVPGP 304
P P G + + PP ++ + GD L + G+ GP
Sbjct: 1464 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGP 1523
Query: 305 RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GP GPPGPPG GPPGP G GS G G +G G G PG G GE
Sbjct: 1524 SGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGE 1571
Score = 147 bits (372), Expect = 1e-35
Identities = 82/181 (45%), Positives = 93/181 (51%), Gaps = 33/181 (18%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP---- 252
GPAGP G TG PGP GPPGS G +G+ G+ GP GP G+ GPPGP G PG GR G
Sbjct: 559 GPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGAR 618
Query: 253 --PGPPGPAGNPG----------------PSPNSPQGALYSLQPPTDKDNGDSRLASAIV 294
PG GP G+ G P P+ P G P D + GD +
Sbjct: 619 GMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPG-----PPGDDGERGDD---GEVG 670
Query: 295 DTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKA 354
L G PGPRG GP GPP GPPGPPG G G G +G VGP GEPG G++G
Sbjct: 671 PRGLPGEPGPRGLLGPKGPP---GPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPG 727
Query: 355 A 355
A
Sbjct: 728 A 728
Score = 140 bits (354), Expect = 2e-33
Identities = 84/188 (44%), Positives = 95/188 (50%), Gaps = 27/188 (14%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKG------DRGQTG---EKGPAGPPGLLGPPGP 240
P +R P GP GP G GP GP GPPG G RG+TG + GP GPPG++GP GP
Sbjct: 945 PGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGP 1004
Query: 241 RGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G G MG G PGPPGP G G P +G T D G + L L
Sbjct: 1005 TGETGPMGERGHPGPPGPPGEQGLPGLAGKEG--------TKGDPGPAGLPGKDGPPGLR 1056
Query: 300 GVPGPRGPPGP------PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVK---GEE 350
G PG RG PGP G GP GPPGP G+PG +G AG G +G G PG + G
Sbjct: 1057 GFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1116
Query: 351 GEKAATAE 358
GEK A E
Sbjct: 1117 GEKGAPGE 1124
Score = 140 bits (354), Expect = 2e-33
Identities = 80/194 (41%), Positives = 95/194 (48%), Gaps = 32/194 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP---RGLPG------ 245
PTGP GP GQ GP G G PG +G +G G+KG GP G GPPGP +GLPG
Sbjct: 1181 PTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKG 1240
Query: 246 ------EMGRPGPPGPPGPAGNPGPS-PNSPQGALYSLQPPTDKDN-------------- 284
+MG PGPPGP GP+G PG P P G + + +K
Sbjct: 1241 ETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGG 1300
Query: 285 --GDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSG 342
G ++ +G GP GP GPPG GP+G PGP G PG G GE G G G
Sbjct: 1301 PPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDG 1360
Query: 343 EPGVKGEEGEKAAT 356
PG KG++GE T
Sbjct: 1361 PPGDKGDDGEPGQT 1374
Score = 140 bits (353), Expect = 2e-33
Identities = 79/166 (47%), Positives = 89/166 (53%), Gaps = 27/166 (16%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP---AGPPGLLGPP---GPRGLPGEMGRP 250
G G G+ G PG GPPG KG+RG+ GE GP AGPPG GPP GP+G PG +G P
Sbjct: 1285 GEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFP 1344
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPG 309
G PGPP G PGP+ PP DK D+G+ G PGP G PG
Sbjct: 1345 GDPGPP---GEPGPAGQD--------GPPGDKGDDGEPG---------QTGSPGPTGEPG 1384
Query: 310 PPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
P GPPG RGPPGP G G QG G +G G G PG G G + A
Sbjct: 1385 PSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGA 1430
Score = 140 bits (353), Expect = 2e-33
Identities = 80/179 (44%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP GPPG GP G GP G GD G GE GPAG G G G G PG+ G PGP G
Sbjct: 1322 PPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTG 1381
Query: 255 PPGPAGNPG----PSPNSPQGAL--------YSLQPPTDKDN--GDSRLASAIVDTVLAG 300
PGP+G PG P P P+G L+ P K G L G
Sbjct: 1382 EPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRG 1441
Query: 301 VPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGV------KGEEGEK 353
+PGP G G PG PGP GPPGP G PG GL G+ G G G PG+ GE+GEK
Sbjct: 1442 IPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK 1500
Score = 138 bits (348), Expect = 9e-33
Identities = 87/216 (40%), Positives = 91/216 (42%), Gaps = 51/216 (23%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP----- 244
P +R P G AGP G G PGP GPPG G++G GEKGP GP G G GP GLP
Sbjct: 1089 PGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGP 1148
Query: 245 -------------------------GEMGRPGPPGPPGPAGNPGPS-------PNSPQGA 272
GE G PGP GP GP G PGPS P QG
Sbjct: 1149 VGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGL 1208
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP---------GPPGPPGPRGPPGPP 323
D G L G+PGP G GPPGPPGPRGP G P
Sbjct: 1209 F-----GQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAP 1263
Query: 324 GTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
G G QG G G G GE G GE GE EG
Sbjct: 1264 GADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEG 1299
Score = 137 bits (344), Expect = 3e-32
Identities = 77/167 (46%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P G G G GPPGP GP GS G+RG G GP G PG GP GP G GE G PG G
Sbjct: 1067 PVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKG 1126
Query: 255 PPGPAGNPG-------PSPNSPQGALYSLQPPTDKDN---GDSRLASAIVDTVLAGVPGP 304
P GPAG G P P P G P D D G+ + D G PGP
Sbjct: 1127 PQGPAGRDGLQGPVGLPGPAGPVG-----PPGEDGDKGEIGEPGQKGSKGDKGEQGPPGP 1181
Query: 305 RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
GP GP G PGP G G PG G QGL G++G GP G PG G G
Sbjct: 1182 TGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVG 1228
Score = 136 bits (343), Expect = 3e-32
Identities = 80/177 (45%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G G G G PGP+GPPG GD G+ G+ G GP GL G PGPRGL G G PGPPGPP
Sbjct: 637 GLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPP 696
Query: 257 GPAG---NPGPSPN-SPQGALYSLQPPTDKDN-------------GDSRLASAIVDTVLA 299
G G PGP N PQG PP + N G + L
Sbjct: 697 GVTGMDGQPGPKGNVGPQG---EPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLP 753
Query: 300 GVPGPRGPPGPP---GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G+PG GPPG P GPPG +G GPPG G G G RG G G G+KG +GEK
Sbjct: 754 GMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEK 810
Score = 135 bits (339), Expect = 1e-31
Identities = 89/222 (40%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 157 PSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS 216
P P P P+ P +D LP HP R G G G+TGPPGP G G
Sbjct: 953 PQGPTG-FPGPKGPPGPPGKDGLP-----GHPGQR-----GETGFQGKTGPPGPPGVVGP 1001
Query: 217 KGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG------------- 263
+G G+TG G G PG GPPG +GLPG G+ G G PGPAG PG
Sbjct: 1002 QGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGD 1061
Query: 264 ---PSPNSPQGALYSLQPPTDK----DNGDSRLASAIVDTVLAGVPGPRGPPGP------ 310
P P G + PP G+ A A + G PGP+GPPGP
Sbjct: 1062 RGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGA 1121
Query: 311 PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
PG GP+GP G G G GL G G VGP GE G KGE GE
Sbjct: 1122 PGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGE 1163
Score = 134 bits (338), Expect = 1e-31
Identities = 79/173 (45%), Positives = 89/173 (51%), Gaps = 20/173 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
P GP GPPG+ G G G PG SKGD+G+ G GP GP G +G PGP G GE G G
Sbjct: 1145 PAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRG 1204
Query: 252 PPGPPGPAGNPG----PSPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRG 306
G G G+ G P P P G PP +K + GD + G PGPRG
Sbjct: 1205 QQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGD------VGQMGPPGPPGPRG 1258
Query: 307 PPGPPGPPGPRGPPGPPGTPGS------QGLAGERGTVGPSGEPGVKGEEGEK 353
P G PG GP+GPPG G PG+ G AGE G G G PG KGE GEK
Sbjct: 1259 PSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEK 1311
Score = 132 bits (333), Expect = 5e-31
Identities = 75/171 (43%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P + P G G PG G PGP G G KG+ G G GPAG PG GP G G G G
Sbjct: 1046 LPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPG 1105
Query: 249 RPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGP 307
RPGP GPPGPAG G P PQG P +D + G+PGP GP
Sbjct: 1106 RPGPQGPPGPAGEKGAPGEKGPQG-------PAGRDGLQGPV----------GLPGPAGP 1148
Query: 308 PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
GPPG G +G G PG GS+G GE+G GP+G G G+ G A E
Sbjct: 1149 VGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGE 1199
Score = 131 bits (329), Expect = 1e-30
Identities = 74/176 (42%), Positives = 84/176 (47%), Gaps = 30/176 (17%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR 249
P R GP GPPG GPPG G G G +G G +G GPPG G PG +GLPG G
Sbjct: 678 PGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGA 737
Query: 250 PGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
GPPG GP G PG P + P G P + G PG +
Sbjct: 738 IGPPGEKGPLGKPGLPGMPGADGPPG-----HPGKE------------------GPPGEK 774
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE---PGVKGEEGEKAATAE 358
G GPPGP GP G PGP G G+ G+ G +GT G GE PG KG+ G K E
Sbjct: 775 GGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGE 830
Score = 130 bits (328), Expect = 2e-30
Identities = 76/166 (45%), Positives = 84/166 (50%), Gaps = 23/166 (13%)
Query: 188 PVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEM 247
P PR +R GP GP G+ GP G G PG KG+ +G GPAGPPG GP GP+G G
Sbjct: 906 PGPRGQR--GPTGPRGERGPRGITGKPGPKGN---SGGDGPAGPPGERGPNGPQGPTGFP 960
Query: 248 GRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRG 306
G GPPGPPG G PG P G PP GV GP+G
Sbjct: 961 GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGP-----------------PGVVGPQG 1003
Query: 307 PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
P G GP G RG PGPPG PG QGL G G G G+PG G G+
Sbjct: 1004 PTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGK 1049
Score = 129 bits (325), Expect = 4e-30
Identities = 85/194 (43%), Positives = 94/194 (48%), Gaps = 40/194 (20%)
Query: 184 PLAHPVPRQRRPT-GPAGPPGQTGPPGP------AGPPGSKGDRGQTGEKGPAGPPGLLG 236
P P R R + G G PGQTGP G AG PG KG RG G GP GPPG G
Sbjct: 602 PAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDG 661
Query: 237 PPG------PRGLPGE------MGRPGPPGPPGPA------GNPGPSPN-SPQGALYSLQ 277
G PRGLPGE +G GPPGPPGP G PGP N PQG
Sbjct: 662 ERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQG---EPG 718
Query: 278 PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGT 337
PP + N ++ G+PGP+G GPPG GP G PG PG PG+ G G G
Sbjct: 719 PPGQQGNPGAQ-----------GLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGK 767
Query: 338 VGPSGEPGVKGEEG 351
GP GE G +G G
Sbjct: 768 EGPPGEKGGQGPPG 781
Score = 129 bits (325), Expect = 4e-30
Identities = 77/173 (44%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP---GPRGLPGEMGRPG 251
P G G G G GP GPPG +G G G GP GPPG +G P G +G PGE G PG
Sbjct: 1235 PPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPG 1294
Query: 252 PP---GPPGPAGNPGPSPNS-PQGALYSLQPPTDK----DNGDSRLASAIVDTVLAGVPG 303
P GPPGP G G S P GA PP K D+G G PG
Sbjct: 1295 LPGEGGPPGPKGERGEKGESGPSGA---AGPPGPKGPPGDDGPK------------GSPG 1339
Query: 304 P---RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
P G PGPPG PGP G GPPG G G G+ G+ GP+GEPG G G++
Sbjct: 1340 PVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR 1392
Score = 123 bits (308), Expect = 4e-28
Identities = 71/169 (42%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G PG GPPG G G G G G +GP G G G PG G G G PG PGP
Sbjct: 850 GPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPR 909
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGP--- 313
G G GP + P GD AG PG RGP GP GP
Sbjct: 910 GQRGPTGPRGERGPRGITGKPGPKGNSGGDGP----------AGPPGERGPNGPQGPTGF 959
Query: 314 PGPRGPPGPPGT------PGSQGLAGERGTVGPSGEPGVKGEEGEKAAT 356
PGP+GPPGPPG PG +G G +G GP G PGV G +G T
Sbjct: 960 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGET 1008
Score = 113 bits (282), Expect = 4e-25
Identities = 72/186 (38%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 184 PLAHP----VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG 239
P HP P ++ GP GP G G PGP G G+ G RG G KG G G G G
Sbjct: 761 PPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKG 820
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
G+ G+ G GPPGP G G GP P G L PP +K + L
Sbjct: 821 DMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEK--------GKLGVPGL 872
Query: 299 AGVPGPRGPPGP---PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G PG +GP G PG PG G G GTPG G G+RG GP GE G +G G+
Sbjct: 873 PGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932
Query: 356 TAEGEG 361
G
Sbjct: 933 KGNSGG 938
Score = 111 bits (277), Expect = 1e-24
Identities = 72/190 (37%), Positives = 80/190 (42%), Gaps = 40/190 (21%)
Query: 197 GPAGPPGQTG-------------PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
GP G GQ G PPGP GP G G G G G G PG GPPG GL
Sbjct: 447 GPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGL 506
Query: 244 PGEMGRPGPPGP----------PGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAI 293
PG G PGPPG G AG+ GP ++ + Q L
Sbjct: 507 PGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQES-----QAQAILQQARLALRGPA 561
Query: 294 VDTVLAGVPGPRGPP------------GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
L G PGP GPP GP GP G +GPPGP G PG +G AG G G
Sbjct: 562 GPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMP 621
Query: 342 GEPGVKGEEG 351
G+ G KG+ G
Sbjct: 622 GQTGPKGDRG 631
Score = 105 bits (263), Expect = 6e-23
Identities = 65/167 (38%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 195 PTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
P G GPPG+ GP PG G PG+ G G G++GP G G GPPGP+ G +G PG
Sbjct: 734 PQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQ---GPIGYPG 790
Query: 252 PPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP- 310
P G G G G T + G+ D + G G GPPGP
Sbjct: 791 PRGVKGADGIRG-------------LKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPR 837
Query: 311 --PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
GP GP+G GP G PG G GE+G +G G PG G +G K +
Sbjct: 838 GEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGS 884
Score = 105 bits (263), Expect = 6e-23
Identities = 68/176 (38%), Positives = 79/176 (44%), Gaps = 34/176 (19%)
Query: 190 PRQRRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTG---EKGPAGPPGLLGPPGPRGL 243
P R GP GP G+ GP PGP GPPG KG G G G GP G +G PG G
Sbjct: 834 PGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGA 893
Query: 244 PGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GE G G PG PGP G GP+ P+G + G G+ G
Sbjct: 894 NGEKGGRGTPGKPGPRGQRGPT--GPRG-----------ERGPR------------GITG 928
Query: 304 PRGPPGPPGPPGPRGPP---GPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAAT 356
GP G G GP GPP GP G G G G +G GP G+ G+ G G++ T
Sbjct: 929 KPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGET 984
Score = 80.9 bits (198), Expect = 2e-15
Identities = 64/198 (32%), Positives = 70/198 (35%), Gaps = 76/198 (38%)
Query: 198 PAGPPGQTGPPGPAGPPGS-KGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
P P + GP PA +G G GEKG G P ++ P M GPPGP
Sbjct: 423 PTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPG--------MLIEGPPGPE 474
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
GPAG PGP P T G G PG RGPPG PG PG
Sbjct: 475 GPAGLPGP-------------PGTMGPTGQ------------VGDPGERGPPGRPGLPGA 509
Query: 317 RGPPGPPGT------------------------------------------PGSQGLAGE 334
G PGPPGT G GL G
Sbjct: 510 DGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGR 569
Query: 335 RGTVGPSGEPGVKGEEGE 352
G VGP G G+KGE G+
Sbjct: 570 PGPVGPPGSGGLKGEPGD 587
Score = 77.4 bits (189), Expect = 2e-14
Identities = 52/146 (35%), Positives = 61/146 (41%), Gaps = 23/146 (15%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPRQRRP--TGPAGPPGQTGP------PGPAGPPGS 216
P P+ P LP + P + P G GPPG+ G PGP G G
Sbjct: 1455 PGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGP 1514
Query: 217 KGDRGQTGEKGPAGPPG---LLGPPGPRGLPGEMGR------------PGPPGPPGPAGN 261
KG++G TG GP GPPG L GPPGP+G G G PGPPGPPG
Sbjct: 1515 KGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQ 1574
Query: 262 PGPSPNSPQGALYSLQPPTDKDNGDS 287
P P S D NG++
Sbjct: 1575 PLPIQASRTRRNIDASQLLDDGNGEN 1600
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 147 bits (371), Expect = 2e-35
Identities = 94/223 (42%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---PGPRGLPGE 246
P + GP GP G G G GP G+ G RG G+ GPAGPPG +GP PG G PG
Sbjct: 314 PGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGA 373
Query: 247 MGRPGPPGPPGPAGNPGP-----SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G GP G GP G GP +P SP A S P TD G A A G
Sbjct: 374 KGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 433
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTP------GSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PGPRGPPGP G GP GP G G P G QG GE G GP G PG GEEG++ A
Sbjct: 434 PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGA 493
Query: 356 TAEGEGVQQLREALKILAERVLILEHMIGIHDPLASPEGGSGQ 398
E GV + ER D LA P+G G+
Sbjct: 494 RGEPGGVGPIGPP----GERGAPGNRGFPGQDGLAGPKGAPGE 532
Score = 140 bits (353), Expect = 2e-33
Identities = 84/190 (44%), Positives = 96/190 (50%), Gaps = 34/190 (17%)
Query: 196 TGPAGPPG---------QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP-- 244
TGP GPPG + GPPGPAG G++G G+ GE GP GP G GPPG G P
Sbjct: 788 TGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGA 847
Query: 245 -------GEMGRPGPPGPPGPAGNPGP----SPNSPQGALYSLQPPTDKDNGDSRLASAI 293
G+ G G PGP GP+G PGP P+GA + PP G + A
Sbjct: 848 KGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP-----GATGFPGA- 901
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQ---GLAGERGTVGPSGEPGVKGEE 350
G PG G PGPPGPPGP G GP G G G AGE G GP+G PG KGE
Sbjct: 902 --AGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEP 959
Query: 351 GEKAAT-AEG 359
G+ + AEG
Sbjct: 960 GDDGPSGAEG 969
Score = 139 bits (351), Expect = 4e-33
Identities = 85/209 (40%), Positives = 96/209 (45%), Gaps = 57/209 (27%)
Query: 186 AHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPG------------ 233
A P +R TGP GP G GPPG G PG+KG++G+ G+KG AG PG
Sbjct: 817 ARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876
Query: 234 ------------LLGPPGPRGLPGEMGRPGPPGP---PGPAGNPGPS-PNSPQGALYSLQ 277
GPPG G PG GR GPPG PGP G PGPS + P+GA
Sbjct: 877 PTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSG 936
Query: 278 PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGT 337
PP G+ GP GPPG G PG GP G G PG QGLAG+RG
Sbjct: 937 PPGRAGE--------------PGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGI 982
Query: 338 V---------------GPSGEPGVKGEEG 351
V GPSGEPG +G G
Sbjct: 983 VGLPGQRGERGFPGLPGPSGEPGKQGAPG 1011
Score = 136 bits (343), Expect = 3e-32
Identities = 94/250 (37%), Positives = 109/250 (43%), Gaps = 63/250 (25%)
Query: 165 PAPEST---PPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGP-------------- 207
P P+ P E LP A P +P + TG AGPPG GP
Sbjct: 605 PGPKGANGEPGKAGEKGLPGA-PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSG 663
Query: 208 ----PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG 263
PGP GPPG G G G G AG PGL+GP G RG PGE G PG G GP G PG
Sbjct: 664 FQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPG 723
Query: 264 -PSPNSPQGALYSLQPPTDK----------DNGDSRLASAIVDTVLAGVPGPRGPP---- 308
P + P+GA PP + + G + +A D G GP G P
Sbjct: 724 TPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG 783
Query: 309 -----GPPGPPGPR---------GPPGPPGTPGSQGLAGERGTVGP------------SG 342
GP GPPGP GPPGP G+ G++G GERG GP G
Sbjct: 784 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 843
Query: 343 EPGVKGEEGE 352
+PG KGE+GE
Sbjct: 844 QPGAKGEQGE 853
Score = 134 bits (337), Expect = 2e-31
Identities = 74/170 (43%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
Query: 196 TGPAGPPGQTGPPG-------PAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+G GP GQ G PG P GPPG +G G+ G +G G G G PGPRG GE G
Sbjct: 97 SGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPG 156
Query: 249 RPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
PG PGPPGP G PGP P + D+ G ++L G GP GP
Sbjct: 157 TPGNPGPPGPPGPPGP-PGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPA 215
Query: 309 GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G PGP G +G PG PG PG G G RG GP G+PG GE G+ E
Sbjct: 216 GAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGE 265
Score = 134 bits (337), Expect = 2e-31
Identities = 79/163 (48%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG P GPAG G +GDRG GEKG GP G G PG G PG G PGPPGPP
Sbjct: 117 GPKGPPG---PQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPP 173
Query: 257 GPAGN-----PGPSPNSPQGA-LYSLQPPTDK--DNGDSRLASAIVDTVLAGVPGPRGPP 308
G GN G GA L +Q P G A A G PG G P
Sbjct: 174 GLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEP 233
Query: 309 GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G GP GPRGPPGPPG PG G AG+ G G G PG +G G
Sbjct: 234 GVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARG 276
Score = 133 bits (335), Expect = 3e-31
Identities = 80/189 (42%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP---------GP 240
P Q GP G PG+ GP G AGP G+ GD G+ GE G G GL G P GP
Sbjct: 518 PGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGP 577
Query: 241 RGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSL-QPPTDKDNGDSRLASAIVD 295
G PGE GRPGPPGP G G PG P P G + G L +
Sbjct: 578 SGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGE 637
Query: 296 TVLAGVPGPRGP------PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
T AG PGP GP G PGP G +G PGPPG PG G G++G G +G PG+ G
Sbjct: 638 TGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGP 697
Query: 350 EGEKAATAE 358
GE+ E
Sbjct: 698 RGERGFPGE 706
Score = 131 bits (330), Expect = 1e-30
Identities = 76/175 (43%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP---AGPPGLLGPPGP 240
P A P GP G G GPPGP GP G G +G G+ GP AG PGL GP GP
Sbjct: 893 PGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGP 952
Query: 241 RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
PGE G PG GP G G PGP + Q + L P + G L + G
Sbjct: 953 ---PGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL-PGQRGERGFPGLPGPSGEPGKQG 1008
Query: 301 VPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PG G GPPGP GP G GP G PG +G G G G G GVKG+ GE A
Sbjct: 1009 APGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1063
Score = 131 bits (330), Expect = 1e-30
Identities = 80/175 (45%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 196 TGPAGPPGQTGPPGPAGPPGS------KGDRGQTGE------KGPAGPPGLLGPPGPRGL 243
TGPAG PG+ G PG GPPG KGDRG+TG GP G PG GP G +G
Sbjct: 1028 TGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGD 1087
Query: 244 PGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
GE G GP GP GPAG G P P+G P G+ L T L G+P
Sbjct: 1088 RGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEP-----GERGLKGHRGFTGLQGLP 1142
Query: 303 GPRGP------PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
GP GP GP GP GPRGPPGP G G G G G +GP G G GE G
Sbjct: 1143 GPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETG 1197
Score = 130 bits (327), Expect = 2e-30
Identities = 79/190 (41%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 176 EDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA-------------GPPGSKGDRGQ 222
+D L IP P PT A GQ GP G GPPG +G G+
Sbjct: 73 KDCLSPEIPFGECCPIC--PTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGE 130
Query: 223 TGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDK 282
G +G G G G PGPRG GE G PG PGPPGP G PGP P + D+
Sbjct: 131 QGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGP-PGLGGNFAAQMAGGFDE 189
Query: 283 DNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSG 342
G ++L V G GPRGPPGP G PGP+G G PG PG G++G G GP G
Sbjct: 190 KAGGAQLG---VMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPG 246
Query: 343 EPGVKGEEGE 352
PG G++GE
Sbjct: 247 PPGKPGDDGE 256
Score = 128 bits (322), Expect = 9e-30
Identities = 76/188 (40%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 197 GPAGPPGQTGPPG---PAGPPGSKG---DRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP 250
G +GPPG+ G PG PAGPPG KG D G +G +GP GP GL G G GLPG+ G
Sbjct: 933 GDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGER 992
Query: 251 GPPGPPGPAGNPG-------------PSPNSPQGALYSL-------QPPTDKDNGDSRLA 290
G PG PGP+G PG P P P G P D G A
Sbjct: 993 GFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAA 1052
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
D G G G PGPPG PGP GP G G G G G G GP+G G++G +
Sbjct: 1053 GVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQ 1112
Query: 351 GEKAATAE 358
G + E
Sbjct: 1113 GPRGDKGE 1120
Score = 127 bits (320), Expect = 2e-29
Identities = 80/198 (40%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGD---------RGQTGEKGPAGPPGLLGPPGPRGLPG-- 245
GP+G PG+ G PGP GP G++G +G GE G AG GL G PG RGLPG
Sbjct: 576 GPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKD 635
Query: 246 -EMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDN-------GDSRLASAI 293
E G GPPGP GPAG G P P+ QG PP + G++ +
Sbjct: 636 GETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLV 695
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGT------------------PGSQGLAGER 335
G PG RG PG G GPRG PG PGT PG QG+ GER
Sbjct: 696 GPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGER 755
Query: 336 GTVGPSGEPGVKGEEGEK 353
G G +G G +G+ GEK
Sbjct: 756 GAAGIAGPKGDRGDVGEK 773
Score = 127 bits (319), Expect = 2e-29
Identities = 72/167 (43%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
++ P G GP G G PGPAG G +G RG+ G GP GPPG G PG RG PG+ G G
Sbjct: 466 EQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAG 525
Query: 252 PPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPP 311
P G PG G G + P+GA NGD G+PG RG G P
Sbjct: 526 PKGAPGERGPSGLA--GPKGA-----------NGDPGRPGE------PGLPGARGLTGRP 566
Query: 312 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G GP+G GP G PG G G G G G+PGV G G K A E
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGE 613
Score = 126 bits (317), Expect = 3e-29
Identities = 79/179 (44%), Positives = 85/179 (47%), Gaps = 36/179 (20%)
Query: 189 VPRQRRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPP------GLLGPPG 239
V R TG G PG GP PGPAGP G +GDRG+ G +GP GP G+ GP G
Sbjct: 1054 VKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQG 1113
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVD 295
PRG GE G PG G G G G P P P G D G S
Sbjct: 1114 PRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSG-----------DQGASG------- 1155
Query: 296 TVLAGVPGPRGPPGPPGP---PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
AG GPRGPPGP GP G G PGP G PG +G +GE G GP G PG G G
Sbjct: 1156 --PAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPG 1212
Score = 125 bits (313), Expect = 1e-28
Identities = 75/191 (39%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP---- 250
P GP GPPG G PGP G G+ G+ G+ G GP GP G GPPG G GE G+P
Sbjct: 205 PMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAG 264
Query: 251 --GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA---GVPGPR 305
GPPGP G G PG +P P + P D G++ ++ G PGP
Sbjct: 265 ERGPPGPQGARGFPG-TPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPM 323
Query: 306 GP------------------------PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
GP PGP GPPGP GP G PG PG+ G GE G G
Sbjct: 324 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR 383
Query: 342 GEPGVKGEEGE 352
G G +G GE
Sbjct: 384 GPEGAQGPRGE 394
Score = 123 bits (308), Expect = 4e-28
Identities = 80/194 (41%), Positives = 85/194 (43%), Gaps = 57/194 (29%)
Query: 188 PVPRQRRPTGPAGPPGQTGPPGPAGPPGSKG------------------------DRGQT 223
P PR R G G PG GPPGP GPPG G +G
Sbjct: 146 PGPRGR--DGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPM 203
Query: 224 GEKGPAGPPGLLGPPGPRGL---PGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPT 280
G GP GPPG G PGP+G PGE G PG GP GP G PGP P
Sbjct: 204 GPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGP-------------PGK 250
Query: 281 DKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGP 340
D+G+ AG PG G GPPGP G RG PG PG PG +G G G G
Sbjct: 251 PGDDGE------------AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGA 298
Query: 341 SGE---PGVKGEEG 351
GE PGVKGE G
Sbjct: 299 KGEAGAPGVKGESG 312
Score = 120 bits (302), Expect = 2e-27
Identities = 82/228 (35%), Positives = 96/228 (42%), Gaps = 62/228 (27%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGP------------------ 231
P +R P+G AGP G G PG G PG G RG TG G AGP
Sbjct: 530 PGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGP 589
Query: 232 ---------PGLLGPPGP---------------------RGLP---GEMGRPGPPGPPGP 258
PG++G PGP RGLP GE G GPPGP GP
Sbjct: 590 PGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGP 649
Query: 259 AGNPG----PSPNSPQGALYSLQPPTDKDN-------GDSRLASAIVDTVLAGVPGPRGP 307
AG G P P+ QG PP + G++ + G PG RG
Sbjct: 650 AGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS 709
Query: 308 PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PG G GPRG PG PGT G +G +G G G G PG++G GE+ A
Sbjct: 710 PGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGA 757
Score = 92.4 bits (228), Expect = 7e-19
Identities = 48/108 (44%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP+G G +GP GP+GP G G G +G+ G G PG +GPPGPRG GE G GPPG
Sbjct: 1144 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPG 1203
Query: 255 PPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
PGP G PG P P A L P ++ G L D G+
Sbjct: 1204 NPGPPGPPGPPGPGIDMSAFAGLGP---REKGPDPLQYMRADQAAGGL 1248
Score = 82.8 bits (203), Expect = 6e-16
Identities = 50/136 (36%), Positives = 53/136 (38%), Gaps = 52/136 (38%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---------PGP 240
P +R G G G G PGP GP G +G G G GP GPPG +GP PGP
Sbjct: 1124 PGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGP 1183
Query: 241 RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
G PG GR G GP GP GNPGP
Sbjct: 1184 IGPPGPRGRSGETGPAGPPGNPGP------------------------------------ 1207
Query: 301 VPGPRGPPGPPGPPGP 316
PGPPGPPGP
Sbjct: 1208 -------PGPPGPPGP 1216
Score = 58.5 bits (140), Expect = 1e-08
Identities = 46/143 (32%), Positives = 49/143 (34%), Gaps = 47/143 (32%)
Query: 224 GEKGPAGPPGLL---GPPGPRGLPGEMGR----PGPPGPPGPAGNPGPSPNSPQGALYSL 276
GE P P L G PGP+G GE G GP GPPGP
Sbjct: 83 GECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQ----------------- 125
Query: 277 QPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERG 336
G G +GP G G G +G PGP G G G G G
Sbjct: 126 -----------------------GPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPG 162
Query: 337 TVGPSGEPGVKGEEGEKAATAEG 359
GP G PG G G AA G
Sbjct: 163 PPGPPGPPGPPGLGGNFAAQMAG 185
Score = 45.1 bits (105), Expect = 1e-04
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 23/89 (25%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA 211
+ A P+ P P P+ + A+ +P P GP G G+TGP GP
Sbjct: 1151 QGASGPAGPSGPRGPPGPVGPSGKDG--------ANGIPGPIGPPGPRGRSGETGPAGPP 1202
Query: 212 GPPGSKGDRGQTGEKGPAGPPGLLGPPGP 240
G P GP GPP GPPGP
Sbjct: 1203 GNP------------GPPGPP---GPPGP 1216
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 147 bits (371), Expect = 2e-35
Identities = 94/223 (42%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---PGPRGLPGE 246
P + GP GP G G G GP G+ G RG G+ GPAGPPG +GP PG G PG
Sbjct: 245 PGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGA 304
Query: 247 MGRPGPPGPPGPAGNPGP-----SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G GP G GP G GP +P SP A S P TD G A A G
Sbjct: 305 KGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 364
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTP------GSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PGPRGPPGP G GP GP G G P G QG GE G GP G PG GEEG++ A
Sbjct: 365 PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGA 424
Query: 356 TAEGEGVQQLREALKILAERVLILEHMIGIHDPLASPEGGSGQ 398
E GV + ER D LA P+G G+
Sbjct: 425 RGEPGGVGPIGPP----GERGAPGNRGFPGQDGLAGPKGAPGE 463
Score = 140 bits (353), Expect = 2e-33
Identities = 84/190 (44%), Positives = 96/190 (50%), Gaps = 34/190 (17%)
Query: 196 TGPAGPPG---------QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP-- 244
TGP GPPG + GPPGPAG G++G G+ GE GP GP G GPPG G P
Sbjct: 719 TGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGA 778
Query: 245 -------GEMGRPGPPGPPGPAGNPGP----SPNSPQGALYSLQPPTDKDNGDSRLASAI 293
G+ G G PGP GP+G PGP P+GA + PP G + A
Sbjct: 779 KGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP-----GATGFPGA- 832
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQ---GLAGERGTVGPSGEPGVKGEE 350
G PG G PGPPGPPGP G GP G G G AGE G GP+G PG KGE
Sbjct: 833 --AGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEP 890
Query: 351 GEKAAT-AEG 359
G+ + AEG
Sbjct: 891 GDDGPSGAEG 900
Score = 139 bits (351), Expect = 4e-33
Identities = 85/209 (40%), Positives = 96/209 (45%), Gaps = 57/209 (27%)
Query: 186 AHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPG------------ 233
A P +R TGP GP G GPPG G PG+KG++G+ G+KG AG PG
Sbjct: 748 ARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807
Query: 234 ------------LLGPPGPRGLPGEMGRPGPPGP---PGPAGNPGPS-PNSPQGALYSLQ 277
GPPG G PG GR GPPG PGP G PGPS + P+GA
Sbjct: 808 PTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSG 867
Query: 278 PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGT 337
PP G+ GP GPPG G PG GP G G PG QGLAG+RG
Sbjct: 868 PPGRAGE--------------PGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGI 913
Query: 338 V---------------GPSGEPGVKGEEG 351
V GPSGEPG +G G
Sbjct: 914 VGLPGQRGERGFPGLPGPSGEPGKQGAPG 942
Score = 136 bits (343), Expect = 3e-32
Identities = 94/250 (37%), Positives = 109/250 (43%), Gaps = 63/250 (25%)
Query: 165 PAPEST---PPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGP-------------- 207
P P+ P E LP A P +P + TG AGPPG GP
Sbjct: 536 PGPKGANGEPGKAGEKGLPGA-PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSG 594
Query: 208 ----PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG 263
PGP GPPG G G G G AG PGL+GP G RG PGE G PG G GP G PG
Sbjct: 595 FQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPG 654
Query: 264 -PSPNSPQGALYSLQPPTDK----------DNGDSRLASAIVDTVLAGVPGPRGPP---- 308
P + P+GA PP + + G + +A D G GP G P
Sbjct: 655 TPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG 714
Query: 309 -----GPPGPPGPR---------GPPGPPGTPGSQGLAGERGTVGP------------SG 342
GP GPPGP GPPGP G+ G++G GERG GP G
Sbjct: 715 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 774
Query: 343 EPGVKGEEGE 352
+PG KGE+GE
Sbjct: 775 QPGAKGEQGE 784
Score = 134 bits (337), Expect = 2e-31
Identities = 79/163 (48%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG P GPAG G +GDRG GEKG GP G G PG G PG G PGPPGPP
Sbjct: 48 GPKGPPG---PQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPP 104
Query: 257 GPAGN-----PGPSPNSPQGA-LYSLQPPTDK--DNGDSRLASAIVDTVLAGVPGPRGPP 308
G GN G GA L +Q P G A A G PG G P
Sbjct: 105 GLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEP 164
Query: 309 GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G GP GPRGPPGPPG PG G AG+ G G G PG +G G
Sbjct: 165 GVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARG 207
Score = 133 bits (335), Expect = 3e-31
Identities = 80/189 (42%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP---------GP 240
P Q GP G PG+ GP G AGP G+ GD G+ GE G G GL G P GP
Sbjct: 449 PGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGP 508
Query: 241 RGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSL-QPPTDKDNGDSRLASAIVD 295
G PGE GRPGPPGP G G PG P P G + G L +
Sbjct: 509 SGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGE 568
Query: 296 TVLAGVPGPRGP------PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
T AG PGP GP G PGP G +G PGPPG PG G G++G G +G PG+ G
Sbjct: 569 TGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGP 628
Query: 350 EGEKAATAE 358
GE+ E
Sbjct: 629 RGERGFPGE 637
Score = 132 bits (332), Expect = 6e-31
Identities = 73/166 (43%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 200 GPPGQTGPPG-------PAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP 252
GP GQ G PG P GPPG +G G+ G +G G G G PGPRG GE G PG
Sbjct: 32 GPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGN 91
Query: 253 PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
PGPPGP G PGP P + D+ G ++L G GP GP G PG
Sbjct: 92 PGPPGPPGPPGP-PGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 150
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
P G +G PG PG PG G G RG GP G+PG GE G+ E
Sbjct: 151 PQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGE 196
Score = 131 bits (330), Expect = 1e-30
Identities = 76/175 (43%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP---AGPPGLLGPPGP 240
P A P GP G G GPPGP GP G G +G G+ GP AG PGL GP GP
Sbjct: 824 PGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGP 883
Query: 241 RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
PGE G PG GP G G PGP + Q + L P + G L + G
Sbjct: 884 ---PGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL-PGQRGERGFPGLPGPSGEPGKQG 939
Query: 301 VPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PG G GPPGP GP G GP G PG +G G G G G GVKG+ GE A
Sbjct: 940 APGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 994
Score = 131 bits (330), Expect = 1e-30
Identities = 80/175 (45%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 196 TGPAGPPGQTGPPGPAGPPGS------KGDRGQTGE------KGPAGPPGLLGPPGPRGL 243
TGPAG PG+ G PG GPPG KGDRG+TG GP G PG GP G +G
Sbjct: 959 TGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGD 1018
Query: 244 PGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
GE G GP GP GPAG G P P+G P G+ L T L G+P
Sbjct: 1019 RGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEP-----GERGLKGHRGFTGLQGLP 1073
Query: 303 GPRGP------PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
GP GP GP GP GPRGPPGP G G G G G +GP G G GE G
Sbjct: 1074 GPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETG 1128
Score = 128 bits (322), Expect = 9e-30
Identities = 76/188 (40%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 197 GPAGPPGQTGPPG---PAGPPGSKG---DRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP 250
G +GPPG+ G PG PAGPPG KG D G +G +GP GP GL G G GLPG+ G
Sbjct: 864 GDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGER 923
Query: 251 GPPGPPGPAGNPG-------------PSPNSPQGALYSL-------QPPTDKDNGDSRLA 290
G PG PGP+G PG P P P G P D G A
Sbjct: 924 GFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAA 983
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
D G G G PGPPG PGP GP G G G G G G GP+G G++G +
Sbjct: 984 GVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQ 1043
Query: 351 GEKAATAE 358
G + E
Sbjct: 1044 GPRGDKGE 1051
Score = 127 bits (320), Expect = 2e-29
Identities = 80/198 (40%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGD---------RGQTGEKGPAGPPGLLGPPGPRGLPG-- 245
GP+G PG+ G PGP GP G++G +G GE G AG GL G PG RGLPG
Sbjct: 507 GPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKD 566
Query: 246 -EMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDN-------GDSRLASAI 293
E G GPPGP GPAG G P P+ QG PP + G++ +
Sbjct: 567 GETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLV 626
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGT------------------PGSQGLAGER 335
G PG RG PG G GPRG PG PGT PG QG+ GER
Sbjct: 627 GPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGER 686
Query: 336 GTVGPSGEPGVKGEEGEK 353
G G +G G +G+ GEK
Sbjct: 687 GAAGIAGPKGDRGDVGEK 704
Score = 127 bits (319), Expect = 2e-29
Identities = 72/167 (43%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
++ P G GP G G PGPAG G +G RG+ G GP GPPG G PG RG PG+ G G
Sbjct: 397 EQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAG 456
Query: 252 PPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPP 311
P G PG G G + P+GA NGD G+PG RG G P
Sbjct: 457 PKGAPGERGPSGLA--GPKGA-----------NGDPGRPGE------PGLPGARGLTGRP 497
Query: 312 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G GP+G GP G PG G G G G G+PGV G G K A E
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGE 544
Score = 126 bits (317), Expect = 3e-29
Identities = 79/179 (44%), Positives = 85/179 (47%), Gaps = 36/179 (20%)
Query: 189 VPRQRRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPP------GLLGPPG 239
V R TG G PG GP PGPAGP G +GDRG+ G +GP GP G+ GP G
Sbjct: 985 VKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQG 1044
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVD 295
PRG GE G PG G G G G P P P G D G S
Sbjct: 1045 PRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSG-----------DQGASG------- 1086
Query: 296 TVLAGVPGPRGPPGPPGP---PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
AG GPRGPPGP GP G G PGP G PG +G +GE G GP G PG G G
Sbjct: 1087 --PAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPG 1143
Score = 125 bits (313), Expect = 1e-28
Identities = 75/191 (39%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP---- 250
P GP GPPG G PGP G G+ G+ G+ G GP GP G GPPG G GE G+P
Sbjct: 136 PMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAG 195
Query: 251 --GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA---GVPGPR 305
GPPGP G G PG +P P + P D G++ ++ G PGP
Sbjct: 196 ERGPPGPQGARGFPG-TPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPM 254
Query: 306 GP------------------------PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
GP PGP GPPGP GP G PG PG+ G GE G G
Sbjct: 255 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR 314
Query: 342 GEPGVKGEEGE 352
G G +G GE
Sbjct: 315 GPEGAQGPRGE 325
Score = 120 bits (302), Expect = 2e-27
Identities = 82/228 (35%), Positives = 96/228 (42%), Gaps = 62/228 (27%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGP------------------ 231
P +R P+G AGP G G PG G PG G RG TG G AGP
Sbjct: 461 PGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGP 520
Query: 232 ---------PGLLGPPGP---------------------RGLP---GEMGRPGPPGPPGP 258
PG++G PGP RGLP GE G GPPGP GP
Sbjct: 521 PGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGP 580
Query: 259 AGNPG----PSPNSPQGALYSLQPPTDKDN-------GDSRLASAIVDTVLAGVPGPRGP 307
AG G P P+ QG PP + G++ + G PG RG
Sbjct: 581 AGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS 640
Query: 308 PGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PG G GPRG PG PGT G +G +G G G G PG++G GE+ A
Sbjct: 641 PGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGA 688
Score = 120 bits (300), Expect = 3e-27
Identities = 76/182 (41%), Positives = 80/182 (43%), Gaps = 42/182 (23%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE---------------------KGPAGPPG 233
P G G PG G PGP GPPG G G G +GP GP G
Sbjct: 79 PRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMG 138
Query: 234 LLGPPGPRGLPGEMGRPGPPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASA 292
GPPGP G PG G G PG PG G GP P P G P D+G+
Sbjct: 139 PRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPG-----PPGKPGDDGE------ 187
Query: 293 IVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE---PGVKGE 349
AG PG G GPPGP G RG PG PG PG +G G G G GE PGVKGE
Sbjct: 188 ------AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE 241
Query: 350 EG 351
G
Sbjct: 242 SG 243
Score = 92.4 bits (228), Expect = 7e-19
Identities = 48/108 (44%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP+G G +GP GP+GP G G G +G+ G G PG +GPPGPRG GE G GPPG
Sbjct: 1075 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPG 1134
Query: 255 PPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
PGP G PG P P A L P ++ G L D G+
Sbjct: 1135 NPGPPGPPGPPGPGIDMSAFAGLGP---REKGPDPLQYMRADQAAGGL 1179
Score = 82.8 bits (203), Expect = 6e-16
Identities = 50/136 (36%), Positives = 53/136 (38%), Gaps = 52/136 (38%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---------PGP 240
P +R G G G G PGP GP G +G G G GP GPPG +GP PGP
Sbjct: 1055 PGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGP 1114
Query: 241 RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
G PG GR G GP GP GNPGP
Sbjct: 1115 IGPPGPRGRSGETGPAGPPGNPGP------------------------------------ 1138
Query: 301 VPGPRGPPGPPGPPGP 316
PGPPGPPGP
Sbjct: 1139 -------PGPPGPPGP 1147
Score = 55.8 bits (133), Expect = 7e-08
Identities = 40/126 (31%), Positives = 43/126 (34%), Gaps = 44/126 (34%)
Query: 238 PGPRGLPGEMGR----PGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAI 293
PGP+G GE G GP GPPGP
Sbjct: 31 PGPKGQKGEPGDIKDIVGPKGPPGPQ---------------------------------- 56
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G G +GP G G G +G PGP G G G G G GP G PG G G
Sbjct: 57 ------GPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNF 110
Query: 354 AATAEG 359
AA G
Sbjct: 111 AAQMAG 116
Score = 45.1 bits (105), Expect = 1e-04
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 23/89 (25%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA 211
+ A P+ P P P+ + A+ +P P GP G G+TGP GP
Sbjct: 1082 QGASGPAGPSGPRGPPGPVGPSGKDG--------ANGIPGPIGPPGPRGRSGETGPAGPP 1133
Query: 212 GPPGSKGDRGQTGEKGPAGPPGLLGPPGP 240
G P GP GPP GPPGP
Sbjct: 1134 GNP------------GPPGPP---GPPGP 1147
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 147 bits (371), Expect = 2e-35
Identities = 83/183 (45%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 186 AHPVPRQRRPTGPAGPPGQTGPPGP---AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
A +P P GPAGP G+ G PGP GPPGS+G+ G GE GP G G GP GP G
Sbjct: 796 ARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDG 855
Query: 243 LPGEMGRPGPPGPPGPAGNPGPS-------PNSPQGALYSLQPPTDKDNGDSRLASAIVD 295
PG G PG PG G AG+PGP P+ P G P G A
Sbjct: 856 QPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGV-----PGLKGGRGTQGPPGATGF 910
Query: 296 TVLAGVPGPRGPPGPPGP------PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
AG GP GP G PGP PG GPPG G PGS G G+RG GP G PG KG+
Sbjct: 911 PGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGD 970
Query: 350 EGE 352
GE
Sbjct: 971 PGE 973
Score = 136 bits (342), Expect = 4e-32
Identities = 85/214 (39%), Positives = 100/214 (46%), Gaps = 56/214 (26%)
Query: 195 PTGPAGPPG------QTGPPGPAG------PPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
P+GP GPPG + GPPGP G PPG G+ G+ G++G G PG +GP GPRG
Sbjct: 652 PSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRG 711
Query: 243 ---------------LPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQ---------- 277
LPGE G G GP GP G+PGPS LQ
Sbjct: 712 ERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAG 771
Query: 278 ---PPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPPGP------PGPRGPPGPPGTPG 327
P D+ G+ + G+PGP GPPGP GP PGPRG GPPG+ G
Sbjct: 772 TPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRG 831
Query: 328 SQGLAGERGTV---------GPSGEPGVKGEEGE 352
+ G GE G GP G+PGVKGE GE
Sbjct: 832 NPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865
Score = 135 bits (341), Expect = 6e-32
Identities = 79/173 (45%), Positives = 88/173 (50%), Gaps = 24/173 (13%)
Query: 195 PTGPAGPPGQTGP---PGPAGPPGSKGD---RGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
P GPAG PG GP PG GPPG +GD G+ G++GPAGPPG PG +G PGE G
Sbjct: 919 PPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPG---GPGDKGDPGEDG 975
Query: 249 RPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+PGP GPPGPAG G P +G P G T G
Sbjct: 976 QPGPDGPPGPAGTTGQRGIVGMPGQRGERG-----MPGLPGPAGTPGKVGPTGATGDKGP 1030
Query: 302 PGPRGPP---GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PGP GPP GP G PGP GP G GTPG G GERG G G G+ G +G
Sbjct: 1031 PGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQG 1083
Score = 134 bits (336), Expect = 2e-31
Identities = 76/173 (43%), Positives = 87/173 (50%), Gaps = 9/173 (5%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKG---DRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P + GP GP G GP GP G PG +G +G G++G G PG GP GP G+PG
Sbjct: 317 PGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGS 376
Query: 247 MGRPGPPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
G PG PG G AG G P PQG PP G L AI G PG +
Sbjct: 377 SGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPV--GSPGLPGAIGTD---GTPGAK 431
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
GP G PG GP G GPPG+PG QG G +G G G+PGV G +GE E
Sbjct: 432 GPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGE 484
Score = 133 bits (334), Expect = 4e-31
Identities = 81/185 (43%), Positives = 95/185 (51%), Gaps = 18/185 (9%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP---------GPRGLPG 245
P G +G PG+ G G AG PG +G G+ GE GP+GP +GPP GP G G
Sbjct: 619 PKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGP---VGPPGLAGERGEQGPPGPTG 675
Query: 246 EMGRPGPPGPPGPAGNPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTV-LAGVP 302
G PGPPGPPG G PG P P GA+ L P ++ N R I G+
Sbjct: 676 FQGLPGPPGPPGEGGKPGDQGVPGDP-GAVGPLGPRGERGNPGERGEPGITGLPGEKGMA 734
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA--TAEGE 360
G GP GP G PGP G PG G PG QG+ GERG G G G +G GEK A TA +
Sbjct: 735 GGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGND 794
Query: 361 GVQQL 365
G + L
Sbjct: 795 GARGL 799
Score = 130 bits (326), Expect = 3e-30
Identities = 75/174 (43%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 186 AHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGL---LGPPGP-- 240
AH +P + P GP G PG +G PG PG KG+ G TG +GP GP G GPPGP
Sbjct: 358 AHGMPGKPGPMGPLGIPGSSGFPGN---PGMKGEAGPTGARGPEGPQGQRGETGPPGPVG 414
Query: 241 -RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
GLPG +G G PG GP G+PG S P A P G + D +
Sbjct: 415 SPGLPGAIGTDGTPGAKGPTGSPGTS-GPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVP 473
Query: 300 GVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G G GP G PGP G +GP GPPG G +G G+ GTVGP G G +G G +
Sbjct: 474 GFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNR 527
Score = 129 bits (323), Expect = 7e-30
Identities = 71/171 (41%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
P A P GP GP G GP GP G PG +G G G+ G G G GP GP G
Sbjct: 905 PGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGG 964
Query: 244 PGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
PG+ G PG G PGP G PGP+ + Q + + P + G + G+PG
Sbjct: 965 PGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGM-PGQRGERG------------MPGLPG 1011
Query: 304 PRGPP---GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
P G P GP G G +GPPGP G PGS G GE G GP+G G G +G
Sbjct: 1012 PAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDG 1062
Score = 129 bits (323), Expect = 7e-30
Identities = 75/175 (42%), Positives = 87/175 (49%), Gaps = 21/175 (12%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
Q P GP GP G TG G G PG +G+RG G GPAG PG +GP G G G G G
Sbjct: 976 QPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVG 1035
Query: 252 PPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PPG GP G PGP P G P D G+ D AG+PG +G PG
Sbjct: 1036 PPGSNGPVGEPGPEGPAGNDGT-----PGRDGAVGERGDRG---DPGPAGLPGSQGAPGT 1087
Query: 311 PGP------------PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
PGP PG RGP GPPG G +GL G +G G G+ G +G+ G+K
Sbjct: 1088 PGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQK 1142
Score = 128 bits (322), Expect = 9e-30
Identities = 82/211 (38%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 150 LLEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQT---- 205
+L+ A+ + P P TP N +F R G G PG
Sbjct: 79 VLDCADPVTPPGECCPVCSQTPGGGNTNF-------------GRGRKGQKGEPGLVPVVT 125
Query: 206 ---GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNP 262
G PGPAGPPGS+G R GE+GP G P GP GP+G+ GE G PG PG PGP G+P
Sbjct: 126 GIRGRPGPAGPPGSQGPR---GERGPKGRP---GPRGPQGIDGEPGVPGQPGAPGPPGHP 179
Query: 263 G-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPG 321
P P+ + D+ +G + +V G GPRGP G G G GP G
Sbjct: 180 SHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSV--GPVGPRGPQGLQGQQGGAGPTG 237
Query: 322 PPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
PPG PG G G G+ GP G PG GE+GE
Sbjct: 238 PPGEPGDPGPMGPIGSRGPEGPPGKPGEDGE 268
Score = 126 bits (316), Expect = 4e-29
Identities = 86/188 (45%), Positives = 91/188 (48%), Gaps = 32/188 (17%)
Query: 197 GPAGPPGQTGPPGP---------AGPPGSKGDRGQTGEKGP---AGPPGLLGPPGPRGLP 244
GP+G PG TGPPG AG PG KGDRG GEKG AG G G PGP G P
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806
Query: 245 ------GEMGRPGP---PGPPGPAGNPGP-SPNSPQGALYSLQP------PTDK----DN 284
GE G PGP GPPG GNPG N P GA+ P P K +
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEP 866
Query: 285 GDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP 344
G A + LAG PGP GP G PG G RG GPPG G G AG G GP+G P
Sbjct: 867 GQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAP 926
Query: 345 GVKGEEGE 352
G G GE
Sbjct: 927 GPAGPLGE 934
Score = 124 bits (311), Expect = 2e-28
Identities = 80/185 (43%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG---PAGP---PGLLGPPGPRGLPGEM--- 247
G G G GP G G PGSKG+ G TG G P GP PG G GP+G PG+
Sbjct: 300 GHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAH 359
Query: 248 GRPGPPGPPGPAGNPGPS-------------------PNSPQGALYSLQPPTDKDNGDSR 288
G PG PGP GP G PG S P PQG PP G
Sbjct: 360 GMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPV--GSPG 417
Query: 289 LASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
L AI G GP G PG GPPG GPPG PG GS G G RG G G PG KG
Sbjct: 418 LPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKG 477
Query: 349 EEGEK 353
E G K
Sbjct: 478 EAGPK 482
Score = 123 bits (309), Expect = 3e-28
Identities = 75/172 (43%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL---GPPGPRGLPG 245
VP + GP G PG G GP GPPG +G RG G+ G GPPG + G PG RG PG
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPG 531
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
G PGP G G G G S P+G+ P G+ L A T GV GP
Sbjct: 532 SDGLPGPKGAQGERGPVGSS--GPKGSQGDPGRP-----GEPGLPGARGLTGNPGVQGPE 584
Query: 306 GPPGPPGPPGPRGPPGPPGT------PGSQGLAGERGTVGPSGEPGVKGEEG 351
G GP G PG G PGPPG+ PGS GL G +G+ G G+PG G G
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAG 636
Score = 123 bits (308), Expect = 4e-28
Identities = 71/166 (42%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G PG +GPPG AGPPGS G +G TG +G G PG G PG +G G G PGP G
Sbjct: 432 GPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQ 491
Query: 257 GPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG 315
GP G PG P+G ++ PP G+ G+PGP+G G GP G
Sbjct: 492 GPIGPPGEEGKRGPRGDPGTVGPPGPV--GERGAPGNRGFPGSDGLPGPKGAQGERGPVG 549
Query: 316 PRGP---------PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GP PG PG PG++GL G G GP G+ G G GE
Sbjct: 550 SSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGE 595
Score = 122 bits (305), Expect = 8e-28
Identities = 78/194 (40%), Positives = 91/194 (46%), Gaps = 18/194 (9%)
Query: 178 FLPDAIPLAHPVPRQ-RRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPPG 233
F +A P P P + P GP G G+ GP PG GPPG G+RG G +G G G
Sbjct: 475 FKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDG 534
Query: 234 LLGP------------PGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSL-QPP 279
L GP GP+G G+ GRPG PG PG G G P P+G L L P
Sbjct: 535 LPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPG 594
Query: 280 TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
D G G+PGP+G G PG PG G G PG G+ G GE G G
Sbjct: 595 EDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSG 654
Query: 340 PSGEPGVKGEEGEK 353
P G PG+ GE GE+
Sbjct: 655 PVGPPGLAGERGEQ 668
Score = 120 bits (301), Expect = 2e-27
Identities = 81/216 (37%), Positives = 88/216 (40%), Gaps = 57/216 (26%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDR------GQTGEKGPAGPPGLLGP----- 237
+P QR G G PG G PG GP G+ GD+ G G GP G PG GP
Sbjct: 997 MPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDG 1056
Query: 238 ----------------PGPRGLPGEMGRPGPPGP---------------PGPAGNPG--- 263
PGP GLPG G PG PGP GP G PG
Sbjct: 1057 TPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAG 1116
Query: 264 ----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGP---PGP 316
P P P+G D GD T L G+PGP GP G G PGP
Sbjct: 1117 KRGLPGPQGPRG-----DKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGP 1171
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GP GPPG G G G G +GP G PGV+G GE
Sbjct: 1172 FGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGE 1207
Score = 120 bits (300), Expect = 3e-27
Identities = 68/158 (43%), Positives = 78/158 (49%), Gaps = 25/158 (15%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G G G TG PG +GPPGS G G G +G GP G+ G PG G+PG G GP G P
Sbjct: 426 GTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEP 485
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP---PGP 313
GP G GP + PP ++ R G PG GPPGP G
Sbjct: 486 GPHGIQGP-----------IGPPGEEGKRGPR-----------GDPGTVGPPGPVGERGA 523
Query: 314 PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PG RG PG G PG +G GERG VG SG G +G+ G
Sbjct: 524 PGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPG 561
Score = 116 bits (291), Expect = 4e-26
Identities = 88/252 (34%), Positives = 110/252 (43%), Gaps = 37/252 (14%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGD---RGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P R P GP G G+ G PGP GP G KGD RG G+KG G GL G PGP G GE
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGE 1162
Query: 247 MGRPGPPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
G G PGP GP G PGP P+ +G L P I + G G
Sbjct: 1163 QGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGP--------------IGPPGVRGSVGEA 1208
Query: 306 GPPGPPGPPGPRGPPGPPG--TPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQ 363
GP GPPG PGP GPPGPPG T + G P +P + E + A + +
Sbjct: 1209 GPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMP--DPLPEFTEDQAAPDDKNKTDP 1266
Query: 364 QLREALKILAERVLILEHMIGIHDPLASPEGGSGQDAALRANLKMKRGGAQPDGVLAALL 423
+ LK L+ ++ + + SP+G A +LK+ Q +
Sbjct: 1267 GVHATLKSLSSQI----------ETMRSPDGSKKHPARTCDDLKLCHSAKQ-----SGEY 1311
Query: 424 GPDPGQKSVDQA 435
DP Q SV+ A
Sbjct: 1312 WIDPNQGSVEDA 1323
Score = 114 bits (285), Expect = 2e-25
Identities = 77/195 (39%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P P GP GP G G G AGP G G+ G G GP G G GPPG G GE G
Sbjct: 211 MPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPG 270
Query: 249 RPGPPGPPGPAGNPGPS--PNSP--------------QGALYSLQPPTDK-DNGDSRLAS 291
R G PG G AG+PG P +P +G + P K + G +
Sbjct: 271 RNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMG 330
Query: 292 AIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
A+ G+PG RG GP G PG RG G PG PG G G G+ G G PG+KGE G
Sbjct: 331 AMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAG 390
Query: 352 EKAATAEGEGVQQLR 366
A EG Q R
Sbjct: 391 PTGARGP-EGPQGQR 404
Score = 48.9 bits (115), Expect = 9e-06
Identities = 41/133 (30%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 300 GVPGPRGPPGPP-------GPPGPRGPP---GPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
G G +G PG G PGP GPP GP G G +G G RG G GEPGV G+
Sbjct: 110 GRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQ 169
Query: 350 EGEKAATAE-----GEGVQQLREALKILAERVLILEHMIGIHDPLASPEGGSGQDAALRA 404
G +G+ + A + L +G+ P G G
Sbjct: 170 PGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQ----- 224
Query: 405 NLKMKRGGAQPDG 417
L+ ++GGA P G
Sbjct: 225 GLQGQQGGAGPTG 237
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 146 bits (369), Expect = 3e-35
Identities = 84/177 (47%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 195 PTGPAGPPG---QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
P GPAG PG ++GP GPAGP G++G G GE GP GP G GPPG G PG G PG
Sbjct: 771 PPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPG 830
Query: 252 ---------PPGPPGPAGNPGPSPN----SPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
PPGP GPAG PGP N +GA S PP G + A
Sbjct: 831 DAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP-----GATGFPGA---AGR 882
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G PGP G GPPGPPGP G G G G G AG G VGP G PG GE+G A
Sbjct: 883 VGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGA 939
Score = 145 bits (366), Expect = 7e-35
Identities = 90/208 (43%), Positives = 99/208 (47%), Gaps = 55/208 (26%)
Query: 186 AHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
A P R GP GP G GPPG G PG+KG+ G G KG AGPPG GP GP G G
Sbjct: 795 ARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIG 854
Query: 246 EMGRP---------GPP------------GPPGPAGNPGPSPNSPQGALYSLQPPTDKDN 284
+G P GPP GPPGP+GN GP P P P K+
Sbjct: 855 NVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGP-PGPP--------GPAGKEG 905
Query: 285 GDSRLASAIVDTVLAGVPGPRGPPGPPGP------PGPRGPPGPPGTPGSQGLAGERGTV 338
G +T AG PG GPPGPPGP PG GP G PGTPG QG+AG+RG V
Sbjct: 906 GKGPRG----ETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV 961
Query: 339 ---------------GPSGEPGVKGEEG 351
GPSGEPG +G G
Sbjct: 962 GLPGQRGERGFPGLPGPSGEPGKQGPSG 989
Score = 145 bits (365), Expect = 9e-35
Identities = 76/169 (44%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
P A P GP GP G GPPGP GP G +G +G GE GPAG PG +GPPGP G
Sbjct: 871 PGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGP 930
Query: 244 PGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GE G PG GP G G PGP + Q + L P + G L + G G
Sbjct: 931 AGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGL-PGQRGERGFPGLPGPSGEPGKQGPSG 989
Query: 304 PRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
G GPPGP GP G GPPG G +G G G+ G G PG KG+ GE
Sbjct: 990 ASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGE 1038
Score = 144 bits (362), Expect = 2e-34
Identities = 82/187 (43%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP------RGL 243
P R P+GP GP G GP G +G PG+ G +G TG KG GP G+ GPPGP RG
Sbjct: 412 PGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGA 471
Query: 244 PGEMGRPGPPGPPGPAGNPG----------PSPNSPQGALYSLQPPTDKDN-------GD 286
GE G G PGPPG G PG P P G S P K + G+
Sbjct: 472 RGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGE 531
Query: 287 SRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGV 346
+ L A T G PGP G GPPGP G G PGPPG PG++G AG G GP G G
Sbjct: 532 AGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGE 591
Query: 347 KGEEGEK 353
G+ GE+
Sbjct: 592 PGKAGER 598
Score = 142 bits (357), Expect = 8e-34
Identities = 81/182 (44%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTG---PPGPAGPPGSKGDRGQTGEKGPAGPPGLLG 236
P +P P P G G G TG PPGP GP G G G G KG AGP G G
Sbjct: 303 PRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRG 362
Query: 237 PPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDT 296
GP+G+ GE G PGP G GPAGNPG QP NG +A A
Sbjct: 363 SEGPQGVRGEPGPPGPAGAAGPAGNPGADG----------QPGAKGANGAPGIAGAPGFP 412
Query: 297 VLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAAT 356
G GP+GP GPPGP G G PG PG+ G G GE G VG G PG GEEG++ A
Sbjct: 413 GARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGAR 472
Query: 357 AE 358
E
Sbjct: 473 GE 474
Score = 138 bits (347), Expect = 1e-32
Identities = 82/189 (43%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 192 QRRPTGPAGPPGQTGPPGPAG---------------PPGSKGDRGQTGEKGPAGPPGLLG 236
+R P GP GPPG GPPG +G PG+KGDRG+TG GP G PG G
Sbjct: 993 ERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPG 1052
Query: 237 PPGPRGLPGEMGRPGPPGPPGPAGNPGP----SPNSPQGALYSLQPPTDK----DNGDSR 288
PGP G G+ G G GP GPAG GP P PQG P DK + GD
Sbjct: 1053 APGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQG------PRGDKGETGEQGDRG 1106
Query: 289 LASAIVDTVLAGVPGP------RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSG 342
+ + L G PGP +GP G GP GPRGPPG G PG GL G G +GP G
Sbjct: 1107 IKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPG 1166
Query: 343 EPGVKGEEG 351
G G+ G
Sbjct: 1167 PRGRTGDAG 1175
Score = 137 bits (345), Expect = 2e-32
Identities = 79/181 (43%), Positives = 88/181 (48%), Gaps = 24/181 (13%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P G GP G+ G G GPPG G G+ GE+GPAG PG G PGP G PGE G+PG G
Sbjct: 603 PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQG 662
Query: 255 PPGPAGNPGPS-------------------PNSPQGALYSLQPPTDKDNGDSRLASAIVD 295
PG G PGPS P P+GA + P D GD+ A
Sbjct: 663 VPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGA--NGAPGNDGAKGDAGAPGAPGS 720
Query: 296 ---TVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
L G+PG RG G PGP G RG GP G GS G G RG GP G PG G G+
Sbjct: 721 QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGD 780
Query: 353 K 353
K
Sbjct: 781 K 781
Score = 134 bits (338), Expect = 1e-31
Identities = 78/185 (42%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 196 TGPAGPPGQTGPPGPAGPPGSK---------------GDRGQTGEKGPAGPPGLLGPPGP 240
TGP GP GQ G PGP GPPG++ G+ G+ GE+G GPPG +GP G
Sbjct: 553 TGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGK 612
Query: 241 RGLPGEMGRPGPPGP------PGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLA 290
G G G PGP GP GPAG+PG P P P G + +P GD
Sbjct: 613 DGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGE--AGKPGEQGVPGDLGAP 670
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
G PG RG GPPGP GPRG G PG G++G AG G G G PG++G
Sbjct: 671 GPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMP 730
Query: 351 GEKAA 355
GE+ A
Sbjct: 731 GERGA 735
Score = 132 bits (332), Expect = 6e-31
Identities = 74/172 (43%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP---- 252
GP GP G+ G PGPAGP GS G+ G+ GE G G GL G PG G G+ G PGP
Sbjct: 503 GPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQD 562
Query: 253 --PGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
PGPPGP G G P P G +P + G A+ G G
Sbjct: 563 GRPGPPGPPGARGQAGVMGFPGPKGAAG-----EPGKAGERGVPGPPGAVGPAGKDGEAG 617
Query: 304 PRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
+GPPGP GP G RG GP G+PG QGL G G G +G+PG +G G+ A
Sbjct: 618 AQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGA 669
Score = 128 bits (322), Expect = 9e-30
Identities = 89/242 (36%), Positives = 99/242 (40%), Gaps = 67/242 (27%)
Query: 155 ERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGP---A 211
E + P ++P E P P P + TG GP G TGP GP A
Sbjct: 77 ETKNCPGAEVPEGECCP----------VCPDGSESPTDQETTGVEGPKGDTGPRGPRGPA 126
Query: 212 GPPGSKGDRGQTGEKGPAGPPGLLGPPG-------------------------------P 240
GPPG G GQ G GP GPPG GPPG P
Sbjct: 127 GPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGP 186
Query: 241 RGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPP-TDKDNGDSRLASAIVDTVL 298
RGLPG G PGP G GP G PG P + P G PP + D+G+
Sbjct: 187 RGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGE------------ 234
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQ---------GLAGERGTVGPSGEPGVKGE 349
AG PG G GPPGP G RG PG G PG + G G+ G GP GEPG GE
Sbjct: 235 AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGE 294
Query: 350 EG 351
G
Sbjct: 295 NG 296
Score = 128 bits (321), Expect = 1e-29
Identities = 71/157 (45%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 198 PAGPPGQTGPPGP--AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGP 255
P P G P G G KGD G G +GPAGPPG G PG GLPG G PGPPGP
Sbjct: 93 PVCPDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGP 152
Query: 256 PGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG 315
PG GN P + Y +K G + + G GPRG PGPPG PG
Sbjct: 153 PGLGGNFAPQLS------YGYD---EKSTGGISVPGPM------GPSGPRGLPGPPGAPG 197
Query: 316 PRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
P+G GPPG PG G +G G GP G PG G++GE
Sbjct: 198 PQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGE 234
Score = 128 bits (321), Expect = 1e-29
Identities = 75/190 (39%), Positives = 82/190 (43%), Gaps = 32/190 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P G G PG+ G G GP G G G G+KG +GP G GP G RG PG+ G PGPPG
Sbjct: 750 PKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPG 809
Query: 255 PPGPAGNPG----------------------PSPNSPQGALYSLQPPTDKDN----GDSR 288
P G AG PG P P P G PP N G
Sbjct: 810 PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG------PPGPIGNVGAPGAKG 863
Query: 289 LASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
+ G PG G GPPGP G GPPGPPG G +G G RG GP+G PG G
Sbjct: 864 ARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVG 923
Query: 349 EEGEKAATAE 358
G E
Sbjct: 924 PPGPPGPAGE 933
Score = 127 bits (318), Expect = 3e-29
Identities = 82/214 (38%), Positives = 92/214 (42%), Gaps = 38/214 (17%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQ---TGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLG 236
P +P P + GP G PG+ +GP GP GPPG G G GE G G PG G
Sbjct: 186 PRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERG 245
Query: 237 PPGP---RGLPGEMGRP---------------GPPGPPGPAGNPG-PSPNSPQGALYSLQ 277
PPGP RGLPG G P G GP GP G PG P N G +
Sbjct: 246 PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRG 305
Query: 278 PPTDKDN----GDSRLASAIVDTVLAGVPGPRGPPGPP------------GPPGPRGPPG 321
P ++ G + T AG PGP GP GPP GP GPRG G
Sbjct: 306 LPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEG 365
Query: 322 PPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
P G G G G G GP+G PG G+ G K A
Sbjct: 366 PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGA 399
Score = 126 bits (317), Expect = 3e-29
Identities = 78/194 (40%), Positives = 86/194 (44%), Gaps = 37/194 (19%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP+GP G GPPG GP G +G G+ GE G +GP G GPPGP G G+ G G PG
Sbjct: 180 PMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPG 239
Query: 255 PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA--------------- 299
PG G PGP L P G S L A D A
Sbjct: 240 RPGERGPPGPQGARGLPGTAGL-PGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAP 298
Query: 300 ------GVPGPRGPPGPP---------------GPPGPRGPPGPPGTPGSQGLAGERGTV 338
G+PG RG PG P GPPGP GP GPPG PG+ G GE G
Sbjct: 299 GQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQ 358
Query: 339 GPSGEPGVKGEEGE 352
GP G G +G GE
Sbjct: 359 GPRGSEGPQGVRGE 372
Score = 126 bits (316), Expect = 4e-29
Identities = 79/213 (37%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPP---GPAGPPGSKGDRGQTGEKGPAGPPGLLG 236
P P +P P G AG PG+ G P G GP G++G+RG GE+G GPPG G
Sbjct: 636 PAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAG 695
Query: 237 P---------------------------PGPRGLPGEMGRPGPPGPPGPAGNPGP--SPN 267
P PG +G+PGE G G PGP G G+ GP +
Sbjct: 696 PRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADG 755
Query: 268 SP-----QGALYSLQPP----TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRG 318
SP +G + PP D G+S + T G PG RG PGPPGP G G
Sbjct: 756 SPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAG 815
Query: 319 PPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PPG G PG++G G+ G G +G PG G G
Sbjct: 816 PPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG 848
Score = 125 bits (314), Expect = 8e-29
Identities = 90/240 (37%), Positives = 109/240 (45%), Gaps = 30/240 (12%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG 239
P P A P P G +G G+TGP GPAGP G G RG G +GP G G G G
Sbjct: 1044 PPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQG 1103
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
RG+ G G G GPPGP G+PG P GA P G A A L
Sbjct: 1104 DRGIKGHRGFSGLQGPPGPPGSPG--EQGPSGASGPAGP-----RGPPGSAGAPGKDGLN 1156
Query: 300 GVPGPRGPPGP------PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G+PGP GPPGP GP GP GPPGPPG PG AG + P P K +G +
Sbjct: 1157 GLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPS-AGFDFSFLPQ-PPQEKAHDGGR 1214
Query: 354 AATAEGEGVQQLRE-----ALKILAERVLILEHMIGIHDPLASPEGGSGQDAALRANLKM 408
A+ V + R+ LK L++++ + + SPEG A +LKM
Sbjct: 1215 YYRADDANVVRDRDLEVDTTLKSLSQQI----------ENIRSPEGSRKNPARTCRDLKM 1264
Score = 125 bits (313), Expect = 1e-28
Identities = 78/185 (42%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTG------EKGPAGPPGLLGPPG---------PR 241
GP GP G G PG AG PG KG RG +G + GPAGP G G PG PR
Sbjct: 245 GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPR 304
Query: 242 GLPGEMGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIV 294
GLPGE GRPG PGP G GN G P P P G P G A
Sbjct: 305 GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGP-----PGFPGAVGAKGEAGPQG 359
Query: 295 DTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKA 354
G G RG PGPPGP G GP G PG G G G G G +G PG G G
Sbjct: 360 PRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSG 419
Query: 355 ATAEG 359
G
Sbjct: 420 PQGPG 424
Score = 124 bits (312), Expect = 1e-28
Identities = 72/175 (41%), Positives = 86/175 (49%), Gaps = 30/175 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG------PAGPPGLLGPPGPRGLPGEMG 248
P G G G GPPGPAGP G +G++G G G PAGPPG G PG +G+PG++G
Sbjct: 609 PAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLG 668
Query: 249 RPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
PGP G G G PG P P P+GA + P D GD AG
Sbjct: 669 APGPSGARGERGFPGERGVQGPPGPAGPRGA--NGAPGNDGAKGD------------AGA 714
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAAT 356
PG PG G PG +G PG G G G G+RG GP G G G++G + T
Sbjct: 715 PGA---PGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLT 766
Score = 124 bits (311), Expect = 2e-28
Identities = 77/191 (40%), Positives = 86/191 (45%), Gaps = 40/191 (20%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG---------------PR 241
GP G PG+ G PG GP G++G+ G TG GP GP G GPPG PR
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPR 361
Query: 242 GLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G G G G PGPPGPAG GP+ N QP NG +A A G
Sbjct: 362 GSEGPQGVRGEPGPPGPAGAAGPAGNPGADG----QPGAKGANGAPGIAGAPGFPGARGP 417
Query: 302 PGPRGP------------PGPP---------GPPGPRGPPGPPGTPGSQGLAGERGTVGP 340
GP+GP PG P G PGP G GPPG G +G G RG GP
Sbjct: 418 SGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGP 477
Query: 341 SGEPGVKGEEG 351
+G PG GE G
Sbjct: 478 TGLPGPPGERG 488
Score = 124 bits (310), Expect = 2e-28
Identities = 84/199 (42%), Positives = 90/199 (45%), Gaps = 42/199 (21%)
Query: 197 GPAGPPGQTGPPGP---AGPPGSKGDRGQTGEKGPAGPPGL---------LGPPGPRGLP 244
G G PG G PG AG PG KGDRG G KG G PG +GPPGP G P
Sbjct: 719 GSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAP 778
Query: 245 GEMGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKD---NGDSRLASAIV 294
G+ G GP GP GP G G P P P G ++ P D G+ A A
Sbjct: 779 GDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAG--FAGPPGADGQPGAKGEPGDAGAKG 836
Query: 295 DTVLAGVPGPRGPPGPPGP---------PGPRGPPGPPGTPGSQGLAGERGTVGPSGE-- 343
D AG PGP GP GPPGP G RG GPPG G G AG G GPSG
Sbjct: 837 D---AGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAG 893
Query: 344 ----PGVKGEEGEKAATAE 358
PG G+EG K E
Sbjct: 894 PPGPPGPAGKEGGKGPRGE 912
Score = 123 bits (308), Expect = 4e-28
Identities = 73/183 (39%), Positives = 85/183 (46%), Gaps = 37/183 (20%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKG------------------DRGQTGEKGPAGPPG--- 233
P GP G PG+ G PG AG PG+KG GQ G GP GPPG
Sbjct: 516 PAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARG 575
Query: 234 ---LLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLA 290
++G PGP+G GE G+ G G PGP G GP+ G + PP R
Sbjct: 576 QAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPA--GKDGEAGAQGPPGPAGPAGER-- 631
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
G GP G PG G PGP GPPG G PG QG+ G+ G GPSG G +G
Sbjct: 632 ---------GEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFP 682
Query: 351 GEK 353
GE+
Sbjct: 683 GER 685
Score = 122 bits (307), Expect = 5e-28
Identities = 79/190 (41%), Positives = 89/190 (46%), Gaps = 37/190 (19%)
Query: 195 PTGPAGPPG------QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---PGPRGLPG 245
PTGPAGPPG G GP GP GS+G +G GE GP GP G GP PG G PG
Sbjct: 336 PTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPG 395
Query: 246 EMGRPGPPG------------PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAI 293
G G PG P GP G GP P+G S +P GD+
Sbjct: 396 AKGANGAPGIAGAPGFPGARGPSGPQGPGGPP--GPKG--NSGEPGAPGSKGDTGAKGEP 451
Query: 294 VDTVLAGVPGP---------RGPPGP---PGPPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
+ G PGP RG PGP PGPPG RG PG G PG+ G+AG +G G
Sbjct: 452 GPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGER 511
Query: 342 GEPGVKGEEG 351
G PG G +G
Sbjct: 512 GSPGPAGPKG 521
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 145 bits (365), Expect = 9e-35
Identities = 82/175 (46%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 187 HP-VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
HP VP P G GPPG G G AGPPG +G G+ G GP GP GL G PG G G
Sbjct: 634 HPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEG 693
Query: 246 EMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDN-GDSRLASAIVDTVLAGVPG 303
G+PGPPG PG AG PG P P +G PP K + GDS ++ G+PG
Sbjct: 694 RDGKPGPPGEPGKAGEPGLPGPEGARG------PPGFKGHTGDSGAPGPRGESGAMGLPG 747
Query: 304 PRGPP---GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G P G GP GP+GP GP G PG G G G GPSG PG KG +GE +
Sbjct: 748 QEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGS 802
Score = 138 bits (348), Expect = 9e-33
Identities = 92/231 (39%), Positives = 108/231 (46%), Gaps = 32/231 (13%)
Query: 157 PSSPDNDLPAPESTPP---TWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGP 213
P SP P P TP + E+ P P P G G PG+ G PG G
Sbjct: 779 PGSPGE--PGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEP-GEKGVPGKEGVPGKPGE 835
Query: 214 PGSKGDRGQTGEKGPAGPPGLLGPPG---------------PRGLPGEMGRPGPPGPPGP 258
PG KG+RG G KG GPPG G PG P+GLPGE G GPPGPPG
Sbjct: 836 PGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQ 895
Query: 259 AGNPGPSPNSPQGALYSLQPPTDKDNG---DSRLASAIVDTVLA------GVPGPRGPPG 309
G PG SP ++ +L+ ++ G ++RLA + A G PGP GPPG
Sbjct: 896 PGFPGLRGESP--SMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPG 953
Query: 310 PPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGE 360
G PG GP G PG PG GL G G +GP GE G KG+ G GE
Sbjct: 954 KDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGE 1004
Score = 128 bits (322), Expect = 9e-30
Identities = 76/161 (47%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP---GPRGLPGEMGRPG 251
P GP G PG G G G PG G G G+KG AGPPGL GPP GP+G GE G G
Sbjct: 565 PPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADG 624
Query: 252 PPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G G G+PG P P G + PP G +A A AG PG +G PG
Sbjct: 625 EVGQKGDQGHPGVPGFMGPPG---NPGPP-----GADGIAGA------AGPPGIQGSPGK 670
Query: 311 PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
GPPGP+GP G PG PG +G G G GP GEPG GE G
Sbjct: 671 EGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPG 711
Score = 125 bits (314), Expect = 8e-29
Identities = 73/183 (39%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRG---QTGEKGPAGPPGLLGPPGPRGLPGE 246
P + P GP GPPG G G G PG+ G+ G G GP+GPPG +G PG RG PG+
Sbjct: 370 PGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGK 429
Query: 247 MGRPGPPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
G G G G G+PGP P GA PP +G+ L + G G R
Sbjct: 430 DGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKGDR 489
Query: 306 GPPGPPGPPGPR--------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
G PG PG PG R GPPGP G PG +G G RG G G G G +G + +
Sbjct: 490 GAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGLSSLLS 549
Query: 358 EGE 360
G+
Sbjct: 550 PGD 552
Score = 124 bits (312), Expect = 1e-28
Identities = 78/183 (42%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 181 DAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP------AGPPGL 234
D I A P + G GPPG GP G G PG +G G+ G+ GP AG PGL
Sbjct: 653 DGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGL 712
Query: 235 LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIV 294
GP G RG PG G G G PGP G G Q L P D D G
Sbjct: 713 PGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGL----PGKDGDTG--------- 759
Query: 295 DTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGT------VGPSGEPGVKG 348
T G GPRGPPG G PG G PGP GTPG +G GE G+ +GP G PG G
Sbjct: 760 PTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPG 819
Query: 349 EEG 351
E+G
Sbjct: 820 EKG 822
Score = 121 bits (304), Expect = 1e-27
Identities = 72/174 (41%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP GPPG+ G PG G PG G GQ G KG G PGL G GPRG PGE G G PG
Sbjct: 766 PQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPG 825
Query: 255 PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP---GPP 311
G G PG +P + GD G+ G +GPP G P
Sbjct: 826 KEGVPGKPG-------------EPGFKGERGD------------PGIKGDKGPPGGKGQP 860
Query: 312 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQQL 365
G PG G G G G QGL GE G VGP G PG G G + + E +++L
Sbjct: 861 GDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRL 914
Score = 120 bits (302), Expect = 2e-27
Identities = 76/216 (35%), Positives = 95/216 (43%), Gaps = 54/216 (25%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP------------------- 237
GP+GPPG G PG G PG G+RG+ G G G PG +GP
Sbjct: 410 GPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDG 469
Query: 238 ----------PGPRGLPGEMGRPGPPGPPGPAGNPG------PSPNSPQGALYSL----- 276
PGP G G+ G PG PG PG G+PG P P+ P G S
Sbjct: 470 EPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGL 529
Query: 277 ------QPPTDKDNGDSRLASAIVDTVLAGVPG--PRGPPGPPGPPGPRGPPGPPGTPGS 328
Q P +D S L+ ++ + V P GPPG PG PG +G G PG PG
Sbjct: 530 PGFPGPQGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGR 589
Query: 329 QGLAGERGTVGPSGEP------GVKGEEGEKAATAE 358
+G G++G GP G P G +G +GE+ A E
Sbjct: 590 EGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGE 625
Score = 106 bits (264), Expect = 5e-23
Identities = 77/209 (36%), Positives = 85/209 (40%), Gaps = 40/209 (19%)
Query: 171 PPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAG 230
P ED LP L + Q G AG PG+ G G G PG G RG+ G++G G
Sbjct: 252 PGERGEDGLPGKPGLRGEIGEQ----GLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKG 307
Query: 231 PPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLA 290
GL G G RG GE G GPPG PG P P P G+
Sbjct: 308 ELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMP---------------GEQGPK 352
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPP---------GPPGTPGSQGLAGERGTVGPS 341
D L G PG +G PG GP GP GPP G PG G+ G G G GPS
Sbjct: 353 GEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS 412
Query: 342 ------------GEPGVKGEEGEKAATAE 358
G PG GE GEK A E
Sbjct: 413 GPPGSVGAPGLRGTPGKDGERGEKGAAGE 441
Score = 103 bits (256), Expect = 4e-22
Identities = 64/152 (42%), Positives = 75/152 (49%), Gaps = 35/152 (23%)
Query: 178 FLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP 237
+L +P A+ Q RP GP GPPG+ G PG AGP G G GQ G +GP+GP +GP
Sbjct: 929 YLLAQMPPAYMKSSQGRP-GPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGP---IGP 984
Query: 238 PGPRGLPGEMGRPG-----PPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASA 292
G RG G+ G PG GPPG G PG +P KD
Sbjct: 985 KGERGAKGDPGAPGVGLRGEMGPPGIPGQPG-------------EPGYAKDG-------- 1023
Query: 293 IVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPG 324
L G+PGP+G GP G PG GPPGPPG
Sbjct: 1024 -----LPGIPGPQGETGPAGHPGLPGPPGPPG 1050
Score = 99.4 bits (246), Expect = 6e-21
Identities = 75/202 (37%), Positives = 79/202 (39%), Gaps = 53/202 (26%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGD------RGQTGEKGPAGPPGLLGPPGPRGLPGE---- 246
G GPPG G PG G PG KG +G GE GP GPPG G PG GL GE
Sbjct: 849 GDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSM 908
Query: 247 ----------------------------------MGRPGPPGPPGPAGNPGPS-----PN 267
GRPGPPGPPG G PG + P
Sbjct: 909 ETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPG 968
Query: 268 SP-QGALYSLQPPTD-KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG--PRGPPGPP 323
P QG L P K ++ L G GP G PG PG PG G PG P
Sbjct: 969 RPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIP 1028
Query: 324 GTPGSQGLAGERGTVGPSGEPG 345
G G G AG G GP G PG
Sbjct: 1029 GPQGETGPAGHPGLPGPPGPPG 1050
Score = 91.3 bits (225), Expect = 2e-18
Identities = 66/183 (36%), Positives = 72/183 (39%), Gaps = 41/183 (22%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGE------------------------------- 225
GP G PG+ GP GP GPPG G G GE
Sbjct: 876 GPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMP 935
Query: 226 ----KGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPS-PNSPQGALYSLQPPT 280
K G PG GPPG GLPG G G PG PG G GPS P P+G + P
Sbjct: 936 PAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPG 995
Query: 281 DKDNGDSRLASAIVDTVLAGVPGPRG--PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTV 338
G L + + G PG G G PG PGP+G GP G PG G G G
Sbjct: 996 APGVG---LRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQC 1052
Query: 339 GPS 341
PS
Sbjct: 1053 DPS 1055
Score = 79.0 bits (193), Expect = 8e-15
Identities = 56/171 (32%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 117 PGFTGSNCDEECMNCTRLSDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNE 176
PGF G + M R E LE ++ L A P+ + P P
Sbjct: 896 PGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGP---- 951
Query: 177 DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE--------KGP 228
P +P + P G G PGQ G GP+GP G KG+RG G+ +G
Sbjct: 952 -------PGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGE 1004
Query: 229 AGPPGLLGPPG--------------PRGLPGEMGRPGPPGPPGPAGNPGPS 265
GPPG+ G PG P+G G G PG PGPPGP G PS
Sbjct: 1005 MGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPS 1055
Score = 69.3 bits (168), Expect = 6e-12
Identities = 55/174 (31%), Positives = 66/174 (37%), Gaps = 36/174 (20%)
Query: 218 GDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP------PGPP---------GPAGNP 262
G +G ++ A +L GL G PG PG P G AG P
Sbjct: 220 GTQGPADQRADARASCILAAKTAPGLKQLNGEPGERGEDGLPGKPGLRGEIGEQGLAGRP 279
Query: 263 GPS-----PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPP------ 311
G P +P + + G+ L D G GP GPPG P
Sbjct: 280 GEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLF 339
Query: 312 ----------GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
GP G +G PG PG PG QG GE G GP+G PG KG+EG A
Sbjct: 340 TPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGA 393
Score = 60.5 bits (145), Expect = 3e-09
Identities = 49/139 (35%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 239 GPRGLPGEMGRPGPPGPPGPAGNPGPSPNS-------PQG------ALYSLQPPTDKDNG 285
GPR P E G G G GN P+S P+G A Q P D+
Sbjct: 172 GPRTDPWENVDQGAQGACG-RGNTSVLPSSVAPQCSMPKGTGHEFSAALGTQGPADQ-RA 229
Query: 286 DSRLASAIVDTV------LAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
D+R + + L G PG RG G PG PG RG G G G G GE G G
Sbjct: 230 DARASCILAAKTAPGLKQLNGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPG 289
Query: 340 PSGEPGVKGEEGEKAATAE 358
G PGV+GE+G++ E
Sbjct: 290 APGFPGVRGEKGDQGEKGE 308
Score = 45.1 bits (105), Expect = 1e-04
Identities = 27/67 (40%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 193 RRPTGPAGPPGQTGPPGPA--------GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP 244
R GP G PGQ G PG A GP G G G G GP GPPG P
Sbjct: 1002 RGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPSQCAYFA 1061
Query: 245 GEMGRPG 251
RPG
Sbjct: 1062 SLAARPG 1068
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 145 bits (365), Expect = 9e-35
Identities = 82/175 (46%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 187 HP-VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
HP VP P G GPPG G G AGPPG +G G+ G GP GP GL G PG G G
Sbjct: 1187 HPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEG 1246
Query: 246 EMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDN-GDSRLASAIVDTVLAGVPG 303
G+PGPPG PG AG PG P P +G PP K + GDS ++ G+PG
Sbjct: 1247 RDGKPGPPGEPGKAGEPGLPGPEGARG------PPGFKGHTGDSGAPGPRGESGAMGLPG 1300
Query: 304 PRGPP---GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G P G GP GP+GP GP G PG G G G GPSG PG KG +GE +
Sbjct: 1301 QEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGS 1355
Score = 138 bits (348), Expect = 9e-33
Identities = 92/231 (39%), Positives = 108/231 (46%), Gaps = 32/231 (13%)
Query: 157 PSSPDNDLPAPESTPP---TWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGP 213
P SP P P TP + E+ P P P G G PG+ G PG G
Sbjct: 1332 PGSPGE--PGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEP-GEKGVPGKEGVPGKPGE 1388
Query: 214 PGSKGDRGQTGEKGPAGPPGLLGPPG---------------PRGLPGEMGRPGPPGPPGP 258
PG KG+RG G KG GPPG G PG P+GLPGE G GPPGPPG
Sbjct: 1389 PGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQ 1448
Query: 259 AGNPGPSPNSPQGALYSLQPPTDKDNG---DSRLASAIVDTVLA------GVPGPRGPPG 309
G PG SP ++ +L+ ++ G ++RLA + A G PGP GPPG
Sbjct: 1449 PGFPGLRGESP--SMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPG 1506
Query: 310 PPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGE 360
G PG GP G PG PG GL G G +GP GE G KG+ G GE
Sbjct: 1507 KDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGE 1557
Score = 136 bits (343), Expect = 3e-32
Identities = 79/168 (47%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGE------KGPAGPPGLLGPPGPRG---LPGEM 247
GP GP G+ GPPG G G KGD G G +GP GPPG+ GPPGP G LPGE+
Sbjct: 678 GPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEI 737
Query: 248 GRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV-LAGVPGPR 305
G PG PGPPGP G PG PN P G PP K R + L G G +
Sbjct: 738 GFPGKPGPPGPTGPPGKDGPNGPPG------PPGTKGEPGERGEDGLPGKPGLRGEIGEQ 791
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G G PG G G PG PG PG +G G++G G G PG+KG+ GEK
Sbjct: 792 GLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEK 839
Score = 132 bits (332), Expect = 6e-31
Identities = 75/167 (44%), Positives = 84/167 (50%), Gaps = 40/167 (23%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAG---PPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P R G GPPG GP GP G PPG +G RG+ G+ GP G PGLLG GP PG
Sbjct: 662 PGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGP---PGP 718
Query: 247 MGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRG 306
G PGPPGP G G PG G PG G
Sbjct: 719 PGVPGPPGPGGSPGLPGE----------------------------------IGFPGKPG 744
Query: 307 PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
PPGP GPPG GP GPPG PG++G GERG G G+PG++GE GE+
Sbjct: 745 PPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQ 791
Score = 130 bits (328), Expect = 2e-30
Identities = 72/159 (45%), Positives = 83/159 (52%), Gaps = 17/159 (10%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG GPPG G PG +G+RG+ G +G G GL G PG G G+ GRPGP G
Sbjct: 569 GPQGPPGLPGPPGRVGAPGLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVA 628
Query: 257 GPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG 315
GP G G P P G S+ G PGPRG G PGPPG
Sbjct: 629 GPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQ-------------GAPGPRGHQGAPGPPG 675
Query: 316 PRGPPGP---PGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
RGP GP G PG QGL G++G +GP G PG+ G +G
Sbjct: 676 ARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQG 714
Score = 128 bits (322), Expect = 9e-30
Identities = 76/161 (47%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP---GPRGLPGEMGRPG 251
P GP G PG G G G PG G G G+KG AGPPGL GPP GP+G GE G G
Sbjct: 1118 PPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADG 1177
Query: 252 PPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G G G+PG P P G + PP G +A A AG PG +G PG
Sbjct: 1178 EVGQKGDQGHPGVPGFMGPPG---NPGPP-----GADGIAGA------AGPPGIQGSPGK 1223
Query: 311 PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
GPPGP+GP G PG PG +G G G GP GEPG GE G
Sbjct: 1224 EGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPG 1264
Score = 124 bits (312), Expect = 1e-28
Identities = 78/183 (42%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 181 DAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP------AGPPGL 234
D I A P + G GPPG GP G G PG +G G+ G+ GP AG PGL
Sbjct: 1206 DGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGL 1265
Query: 235 LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIV 294
GP G RG PG G G G PGP G G Q L P D D G
Sbjct: 1266 PGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGL----PGKDGDTG--------- 1312
Query: 295 DTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGT------VGPSGEPGVKG 348
T G GPRGPPG G PG G PGP GTPG +G GE G+ +GP G PG G
Sbjct: 1313 PTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPG 1372
Query: 349 EEG 351
E+G
Sbjct: 1373 EKG 1375
Score = 124 bits (311), Expect = 2e-28
Identities = 77/191 (40%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPR---GLPG 245
VP P G G PG+ G PG GPPG G G+ G GP GPPG G PG R GLPG
Sbjct: 721 VPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPG 780
Query: 246 EMGRPGPPGPPGPAGNPGPS-----PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
+ G G G G AG PG P +P + + G+ L D G
Sbjct: 781 KPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKG 840
Query: 301 VPGPRGPPGPP----------------GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP 344
GP GPPG P GP G +G PG PG PG QG GE G GP+G P
Sbjct: 841 EAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPP 900
Query: 345 GVKGEEGEKAA 355
G KG+EG A
Sbjct: 901 GAKGQEGAHGA 911
Score = 123 bits (308), Expect = 4e-28
Identities = 77/202 (38%), Positives = 91/202 (45%), Gaps = 38/202 (18%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRG---QTGEKGPAGPPGLLGPPGPRGLPGE 246
P + P GP GPPG G G G PG+ G+ G G GP+GPPG +G PG RG PG+
Sbjct: 888 PGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGK 947
Query: 247 MGRPGPPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRL-----------ASAIV 294
G G G G G+PGP P GA PP +G+ L A
Sbjct: 948 DGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKAAC 1007
Query: 295 DTV---------------------LAGVPGPRGPP--GPPGPPGPRGPPGPPGTPGSQGL 331
V + G PG RG P G GPPGP GPPG G+PGS+GL
Sbjct: 1008 GKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGL 1067
Query: 332 AGERGTVGPSGEPGVKGEEGEK 353
G G GP+G G G GE+
Sbjct: 1068 PGFPGPQGPAGRDGAPGNPGER 1089
Score = 122 bits (306), Expect = 6e-28
Identities = 83/220 (37%), Positives = 93/220 (42%), Gaps = 51/220 (23%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG---- 245
P + P GP GPPG+ GP GP GPPG+KG+ G+ GE G G PGL G G +GL G
Sbjct: 740 PGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGE 799
Query: 246 --EMGRPGPPGPPGPAGNPGPS----------------------PNSPQG--ALYSLQPP 279
E G PG PG PG G G P P G SL P
Sbjct: 800 KGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTP 859
Query: 280 TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPP---------GPPGTPGSQG 330
+ G+ D L G PG +G PG GP GP GPP G PG G+ G
Sbjct: 860 HPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPG 919
Query: 331 LAGERGTVGPS------------GEPGVKGEEGEKAATAE 358
G G GPS G PG GE GEK A E
Sbjct: 920 APGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGE 959
Score = 122 bits (305), Expect = 8e-28
Identities = 80/201 (39%), Positives = 90/201 (44%), Gaps = 44/201 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG-----RPG 251
G AGPPG +GPPG G PGS+G G G +GPAG G G PG RG PG+ G PG
Sbjct: 1045 GVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPG 1104
Query: 252 -------------PPGPPGPAGNPG----------PSPNSPQGALYSLQPP--------- 279
PPGPPG G PG P +G PP
Sbjct: 1105 DINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIA 1164
Query: 280 ----TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP---RGPPGPPGTPGSQGLA 332
+ + G D GVPG GPPG PGPPG G GPPG GS G
Sbjct: 1165 GPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKE 1224
Query: 333 GERGTVGPSGEPGVKGEEGEK 353
G G GPSG PG+ GEEG++
Sbjct: 1225 GPPGPQGPSGLPGIPGEEGKE 1245
Score = 121 bits (304), Expect = 1e-27
Identities = 72/174 (41%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP GPPG+ G PG G PG G GQ G KG G PGL G GPRG PGE G G PG
Sbjct: 1319 PQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPG 1378
Query: 255 PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP---GPP 311
G G PG +P + GD G+ G +GPP G P
Sbjct: 1379 KEGVPGKPG-------------EPGFKGERGD------------PGIKGDKGPPGGKGQP 1413
Query: 312 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQQL 365
G PG G G G G QGL GE G VGP G PG G G + + E +++L
Sbjct: 1414 GDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRL 1467
Score = 117 bits (294), Expect = 2e-26
Identities = 70/164 (42%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 203 GQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNP 262
G G PG G PGS+GD G G AGPPG GPPG +G PG G PG PGP GPAG
Sbjct: 1025 GDRGAPGIPGSPGSRGDPGI----GVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRD 1080
Query: 263 GPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG--PRGPPGPPGPPGPRGPP 320
G +P +P + P K S L+ ++ + V P GPPG PG PG +G
Sbjct: 1081 G-APGNP-----GERGPPGKPGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDK 1134
Query: 321 GPPGTPGSQGLAGERGTVGPSGEP------GVKGEEGEKAATAE 358
G PG PG +G G++G GP G P G +G +GE+ A E
Sbjct: 1135 GVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGE 1178
Score = 117 bits (292), Expect = 3e-26
Identities = 76/181 (41%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGP- 255
GP+GPPG G PG G PG G+RG EKG AG G GP GPRG PG G PGPPG
Sbjct: 928 GPSGPPGSVGAPGLRGTPGKDGERG---EKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKG 984
Query: 256 ----PGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDS-----RLASAIVDTVLA------ 299
PG G+PG P P + A ++ + G R A I + +
Sbjct: 985 KDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGI 1044
Query: 300 GVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
GV GP GP GPPG G G G PG PG QG AG G G GE G G+ G + + G
Sbjct: 1045 GVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPG 1104
Query: 360 E 360
+
Sbjct: 1105 D 1105
Score = 112 bits (281), Expect = 5e-25
Identities = 73/189 (38%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 179 LPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPP 238
LP L P PR G GP G+ G PG G PG +G G+ G +GP GPPG G
Sbjct: 850 LPGTTSLFTPHPRM---PGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQE 906
Query: 239 GPRGLPGEMGRPGPPG------PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASA 292
G G PG G PG PG P GP G+ G L+ KD
Sbjct: 907 GAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAP---------GLRGTPGKDGE------- 950
Query: 293 IVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
G G G G PGP GPRG PG PG PG G G+ G G G PG+ G G
Sbjct: 951 ------RGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPG-KGKDGEPGLRGSPGLPGPLGT 1003
Query: 353 KAATAEGEG 361
KAA + G
Sbjct: 1004 KAACGKVRG 1012
Score = 103 bits (256), Expect = 4e-22
Identities = 64/152 (42%), Positives = 75/152 (49%), Gaps = 35/152 (23%)
Query: 178 FLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP 237
+L +P A+ Q RP GP GPPG+ G PG AGP G G GQ G +GP+GP +GP
Sbjct: 1482 YLLAQMPPAYMKSSQGRP-GPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGP---IGP 1537
Query: 238 PGPRGLPGEMGRPG-----PPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASA 292
G RG G+ G PG GPPG G PG +P KD
Sbjct: 1538 KGERGAKGDPGAPGVGLRGEMGPPGIPGQPG-------------EPGYAKDG-------- 1576
Query: 293 IVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPG 324
L G+PGP+G GP G PG GPPGPPG
Sbjct: 1577 -----LPGIPGPQGETGPAGHPGLPGPPGPPG 1603
Score = 101 bits (252), Expect = 1e-21
Identities = 68/175 (38%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 195 PTGPAGPPGQTGPPGPAGP-----PGSKG-----------DRGQTGEKGPAGPPGLLGPP 238
P+GP T PP P P PGS+ G+ GE G AGP GL GP
Sbjct: 439 PSGPCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPK 498
Query: 239 GPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
G G G +G PGP G G G GP +G SL P S+ +
Sbjct: 499 GDIGAIGPVGAPGPKGEKGDVGI-GPFGQGEKGEKGSLGLPGPPGRDGSK--------GM 549
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PG G PG PG G RGP GPPG PG G G G G GE G +GE+GE+
Sbjct: 550 RGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGEKGER 604
Score = 99.4 bits (246), Expect = 6e-21
Identities = 75/202 (37%), Positives = 79/202 (39%), Gaps = 53/202 (26%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGD------RGQTGEKGPAGPPGLLGPPGPRGLPGE---- 246
G GPPG G PG G PG KG +G GE GP GPPG G PG GL GE
Sbjct: 1402 GDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSM 1461
Query: 247 ----------------------------------MGRPGPPGPPGPAGNPGPS-----PN 267
GRPGPPGPPG G PG + P
Sbjct: 1462 ETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPG 1521
Query: 268 SP-QGALYSLQPPTD-KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG--PRGPPGPP 323
P QG L P K ++ L G GP G PG PG PG G PG P
Sbjct: 1522 RPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIP 1581
Query: 324 GTPGSQGLAGERGTVGPSGEPG 345
G G G AG G GP G PG
Sbjct: 1582 GPQGETGPAGHPGLPGPPGPPG 1603
Score = 91.3 bits (225), Expect = 2e-18
Identities = 66/183 (36%), Positives = 72/183 (39%), Gaps = 41/183 (22%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGE------------------------------- 225
GP G PG+ GP GP GPPG G G GE
Sbjct: 1429 GPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMP 1488
Query: 226 ----KGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPS-PNSPQGALYSLQPPT 280
K G PG GPPG GLPG G G PG PG G GPS P P+G + P
Sbjct: 1489 PAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPG 1548
Query: 281 DKDNGDSRLASAIVDTVLAGVPGPRG--PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTV 338
G L + + G PG G G PG PGP+G GP G PG G G G
Sbjct: 1549 APGVG---LRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQC 1605
Query: 339 GPS 341
PS
Sbjct: 1606 DPS 1608
Score = 79.0 bits (193), Expect = 8e-15
Identities = 56/171 (32%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 117 PGFTGSNCDEECMNCTRLSDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNE 176
PGF G + M R E LE ++ L A P+ + P P
Sbjct: 1449 PGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGP---- 1504
Query: 177 DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE--------KGP 228
P +P + P G G PGQ G GP+GP G KG+RG G+ +G
Sbjct: 1505 -------PGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGE 1557
Query: 229 AGPPGLLGPPG--------------PRGLPGEMGRPGPPGPPGPAGNPGPS 265
GPPG+ G PG P+G G G PG PGPPGP G PS
Sbjct: 1558 MGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPS 1608
Score = 45.1 bits (105), Expect = 1e-04
Identities = 27/67 (40%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 193 RRPTGPAGPPGQTGPPGPA--------GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP 244
R GP G PGQ G PG A GP G G G G GP GPPG P
Sbjct: 1555 RGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPSQCAYFA 1614
Query: 245 GEMGRPG 251
RPG
Sbjct: 1615 SLAARPG 1621
Score = 44.3 bits (103), Expect = 2e-04
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 310 PPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEG 361
P G G G GP G PG +G + G +GP G PG KGE+G+ G+G
Sbjct: 479 PAGEKGEMGVAGPMGLPGPKG---DIGAIGPVGAPGPKGEKGDVGIGPFGQG 527
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 144 bits (364), Expect = 1e-34
Identities = 89/203 (43%), Positives = 104/203 (51%), Gaps = 39/203 (19%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG------ 248
P GP G PGQ G GP GPPG KG+ G G+KG G P GPPGP+G PG MG
Sbjct: 212 PAGPKGEPGQDGEMGPKGPPGPKGEPGVPGKKGDDGTPSQPGPPGPKGEPGSMGPRGENG 271
Query: 249 ---RPGPPGPPGPAGNPGPSPNSPQGA--LYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
PGP G PG G G + P+GA L Q T + D R+ A L G PG
Sbjct: 272 VDGAPGPKGEPGHRGTDGAA--GPRGAPGLKGEQGDTVVIDYDGRILDA-----LKGPPG 324
Query: 304 PRGPPGPPGPPG------------------PRGPPGPPGTPGSQGLAGERGTVGPSGEP- 344
P+GPPGPPG PG P+G G PG PG GL GE G +G SG P
Sbjct: 325 PQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLSGLPG 384
Query: 345 --GVKGEEGEKAATAEGEGVQQL 365
G+KGE+GE A+ + E + QL
Sbjct: 385 ADGLKGEKGESASDSLQESLAQL 407
Score = 134 bits (336), Expect = 2e-31
Identities = 74/161 (45%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P G G PG GP G G PG G RG G+ G AGPPG GPPG RG PG+ G+ GP G
Sbjct: 149 PLGLDGKPGLPGPKGEKGAPGDFGPRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRG 208
Query: 255 PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPP 314
GPAG G G + PP K G+ + D PGP GP G PG
Sbjct: 209 AQGPAGPKGEP--GQDGEMGPKGPPGPK--GEPGVPGKKGDDGTPSQPGPPGPKGEPGSM 264
Query: 315 GPRGPPGPPGTPGSQGLAGERGT---VGPSGEPGVKGEEGE 352
GPRG G G PG +G G RGT GP G PG+KGE+G+
Sbjct: 265 GPRGENGVDGAPGPKGEPGHRGTDGAAGPRGAPGLKGEQGD 305
Score = 126 bits (317), Expect = 3e-29
Identities = 83/220 (37%), Positives = 103/220 (46%), Gaps = 24/220 (10%)
Query: 188 PVPRQRRP--TGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P R+ +P G GPPGQ+G G GP G G G G KG G PG GP G +G G
Sbjct: 122 PPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGDQGQDG 181
Query: 246 EMGRPGPPGPPGPAGNPGPS-PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP 304
G PGPPGPPG G PG + + P+GA P + G GP
Sbjct: 182 AAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQD--------------GEMGP 227
Query: 305 RGPPGP---PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE--G 359
+GPPGP PG PG +G G P PG G GE G++GP GE GV G G K
Sbjct: 228 KGPPGPKGEPGVPGKKGDDGTPSQPGPPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGT 287
Query: 360 EGVQQLREALKILAER--VLILEHMIGIHDPLASPEGGSG 397
+G R A + E+ +++++ I D L P G G
Sbjct: 288 DGAAGPRGAPGLKGEQGDTVVIDYDGRILDALKGPPGPQG 327
Score = 125 bits (313), Expect = 1e-28
Identities = 71/158 (44%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 198 PAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAG---PPGLLGPPGPRGLPGEMGRPGPPG 254
P GPPG+ G PG G PG G G+ G GP G PGL GP G +G PG+ G G G
Sbjct: 119 PPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGDQG 178
Query: 255 PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPP 314
G AG PGP P GA PP D R A G PG G GP GPP
Sbjct: 179 QDGAAGPPGPP--GPPGA---RGPPGDTGKDGPRGAQGPAGP--KGEPGQDGEMGPKGPP 231
Query: 315 GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GP+G PG PG G G + G GP GEPG G GE
Sbjct: 232 GPKGEPGVPGKKGDDGTPSQPGPPGPKGEPGSMGPRGE 269
Score = 119 bits (297), Expect = 7e-27
Identities = 66/146 (45%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 206 GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPS 265
GPPGP GPPG G G GE G G PG+ G GP+G G+ G PGP G G AG G S
Sbjct: 321 GPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLS 380
Query: 266 PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGT 325
L + + D+ LA IV+ PGP GPPGPPGP G +G GP G
Sbjct: 381 GLPGADGLKGEKGESASDSLQESLAQLIVE------PGPPGPPGPPGPMGLQGIQGPKGL 434
Query: 326 PGSQGLAGERGTVGPSGEPGVKGEEG 351
G++G G G GPSG PG G G
Sbjct: 435 DGAKGEKGASGERGPSGLPGPVGPPG 460
Score = 117 bits (293), Expect = 2e-26
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 46/197 (23%)
Query: 200 GPPGQTGPPGPAGPPGSKGDRGQTG------EKGPAGPPGLLGPPGPRGLPGEMGRPG-- 251
GPPG GPPGP G PG+KG+ G G EKGP G G G PGP GL GE G G
Sbjct: 321 GPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLS 380
Query: 252 -----------------------------PPGPPGPAGNPGP-------SPNSPQGALYS 275
PGPPGP G PGP P GA
Sbjct: 381 GLPGADGLKGEKGESASDSLQESLAQLIVEPGPPGPPGPPGPMGLQGIQGPKGLDGA--K 438
Query: 276 LQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGER 335
+ + G S L + L G+PG +G G PG PG G PGP G G + GE+
Sbjct: 439 GEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEK 498
Query: 336 GTVGPSGEPGVKGEEGE 352
G G G GVKG++GE
Sbjct: 499 GERGVPGRKGVKGQKGE 515
Score = 100 bits (249), Expect = 3e-21
Identities = 63/168 (37%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 177 DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLG 236
D L +++ P P GP GP G G GP G G+KG++G +GE+GP+G PG +G
Sbjct: 398 DSLQESLAQLIVEPGPPGPPGPPGPMGLQGIQGPKGLDGAKGEKGASGERGPSGLPGPVG 457
Query: 237 PPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDT 296
PPG GLPG G G PG PG G PGP +K + R
Sbjct: 458 PPGLIGLPGTKGEKGRPGEPGLDGFPGPR--------------GEKGDRSER-------- 495
Query: 297 VLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP 344
G G RG PG G G +G PGPPG + VGP G P
Sbjct: 496 ---GEKGERGVPGRKGVKGQKGEPGPPG-------LDQPCPVGPDGLP 533
Score = 95.9 bits (237), Expect = 6e-20
Identities = 55/144 (38%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 231 PPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRL 289
P + PPGP G G+ GR G PGPPG +G G P P G +P G+
Sbjct: 113 PSECVCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDG-----KPGLPGPKGEKGA 167
Query: 290 ASAIVDTVLAGVPGPRGPPGPPGPPGPRGPP---------------GPPGTPGSQGLAGE 334
G G GPPGPPGPPG RGPP GP G PG G G
Sbjct: 168 PGDFGPRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGP 227
Query: 335 RGTVGPSGEPGVKGEEGEKAATAE 358
+G GP GEPGV G++G+ ++
Sbjct: 228 KGPPGPKGEPGVPGKKGDDGTPSQ 251
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 144 bits (363), Expect = 2e-34
Identities = 79/168 (47%), Positives = 92/168 (54%), Gaps = 21/168 (12%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAG---PPGLLGPPGPRGLPGEMGRPGPP 253
GP G G GPPGPAGP G +G +G +GEKG G PG GPPGP G PG++G PGPP
Sbjct: 1120 GPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPP 1179
Query: 254 GPP---------GPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GP GP+G PG P P P G +Q P D D + L G PG
Sbjct: 1180 GPQAEKGSEGIRGPSGLPGSPGPPGPPG----IQGPAGLDGLDGKDGK----PGLRGDPG 1231
Query: 304 PRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
P GPPG GPPG +G G PG PG +G G+ G G +G PG +GE G
Sbjct: 1232 PAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1279
Score = 135 bits (340), Expect = 7e-32
Identities = 78/169 (46%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEM-- 247
P R GPAGPPG GPPG G G G G G+ G GPPG G PG G PG M
Sbjct: 1224 PGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGP 1283
Query: 248 -GRPGPP---GPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GRPGPP GPPGP G PGP+ S G GD A + LAG+PG
Sbjct: 1284 QGRPGPPGHVGPPGPPGQPGPAGISAVGL-----------KGD---RGATGERGLAGLPG 1329
Query: 304 PRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GPPG PGPPG G G G G G G G GP G+PG G++G+
Sbjct: 1330 QPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQ 1378
Score = 125 bits (314), Expect = 8e-29
Identities = 83/235 (35%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 187 HP-VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP----- 240
HP +P + G GPPG TG PG G PG+ G +G+ G G GPPG G PGP
Sbjct: 1250 HPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISA 1309
Query: 241 ------------RGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDN 284
RGL G G+PGPPG PGP G PG P G PP K
Sbjct: 1310 VGLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPK-- 1367
Query: 285 GDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP 344
GD A G G +G G PG PG G GP G PG G G G GPSG P
Sbjct: 1368 GDPGAAGQ------KGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSP 1421
Query: 345 GVKGEEGEKAATAEGEGVQQL--REALKILAERVLILEHMIGIHDPLASPEGGSG 397
G+ G G + +++ +E +K+ ER+ + +A+ G G
Sbjct: 1422 GLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPG 1476
Score = 125 bits (313), Expect = 1e-28
Identities = 86/218 (39%), Positives = 95/218 (43%), Gaps = 69/218 (31%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGP------------PGSKGDRGQT------GEKGPAG 230
+P QR GP G G GPPGP GP PG +G+RG T GE GP G
Sbjct: 1028 LPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPG 1087
Query: 231 PPGLLGPPGPRGLP------------GEMGRPGPPGPPGPAGNPGPS----PNSPQGALY 274
PG G GP GLP GE G PGPPG G G PGP+ PQG
Sbjct: 1088 QPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQG--- 1144
Query: 275 SLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP------GPPGPPGP---------RGP 319
+ GD G PGP GPP G PGPPGP RGP
Sbjct: 1145 -----NSGEKGDQGFQGQ------PGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGP 1193
Query: 320 ------PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PGPPG PG QG AG G G G+PG++G+ G
Sbjct: 1194 SGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPG 1231
Score = 121 bits (304), Expect = 1e-27
Identities = 81/200 (40%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 184 PLAHPVPRQRRPT----GPAGPPGQTG---PPGPAGPPGSKGDRGQTGEKGPAGPPG--- 233
P HP P T G GPPG+ G PPGP G PG+ G +GQ GEKG AG PG
Sbjct: 1333 PPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPG 1392
Query: 234 ------LLGPPGP---RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDN 284
+GPPGP RG PG G G PG PG G+ G N + + Q
Sbjct: 1393 KSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKM-- 1450
Query: 285 GDSRLA----SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGP 340
D R+A +A PG GPPG G PG G PG PG PG G G +G G
Sbjct: 1451 FDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGV 1510
Query: 341 SGEPGVKGEEGEKAATAEGE 360
G PG KGE+G+ GE
Sbjct: 1511 RGLPGTKGEKGDIGIGIAGE 1530
Score = 119 bits (298), Expect = 5e-27
Identities = 72/185 (38%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
+ L P + R G PG G PG GPPG G RG+ G G G PG GP GP G
Sbjct: 995 LSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPG 1054
Query: 243 LPGEMGRPGPP---------------GPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGD 286
PG +G PG P G PGP G PG P P G P + G
Sbjct: 1055 FPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGL-----PGIKGERGY 1109
Query: 287 SRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGV 346
+ A + G G GPPGP GP G RGP G G G QG G+ G GP G PG
Sbjct: 1110 TGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGF 1169
Query: 347 KGEEG 351
G+ G
Sbjct: 1170 PGKVG 1174
Score = 118 bits (296), Expect = 9e-27
Identities = 87/246 (35%), Positives = 95/246 (38%), Gaps = 76/246 (30%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS--------KGDRGQTGEKGPAGPPGLL 235
P A P P G GPPG GPPGP G PG KGDRG TGE+G AG PG
Sbjct: 1272 PGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQP 1331
Query: 236 GPPGPRGLPGEMGR------------------PGPPGPPGPAGNPGPS--------PNSP 269
GPPG G PGE G PGP G PG AG G + P P
Sbjct: 1332 GPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGP 1391
Query: 270 --QGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRG-------------------- 306
G++ + PP + G L GVPG G
Sbjct: 1392 GKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMF 1451
Query: 307 -------------------PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVK 347
PG PGPPG G PG PG PGS GL G+ G G G PGV+
Sbjct: 1452 DERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVR 1511
Query: 348 GEEGEK 353
G G K
Sbjct: 1512 GLPGTK 1517
Score = 117 bits (293), Expect = 2e-26
Identities = 82/212 (38%), Positives = 91/212 (42%), Gaps = 59/212 (27%)
Query: 190 PRQRRPTGPAGP--------PGQTGPPGPAGPPGSKGDRGQTGE-----KGPAGPPGLLG 236
P Q P G GP PGQ G PG GPPG KG +G+ G +GP G PG G
Sbjct: 741 PGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPG 800
Query: 237 PPGPRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASA 292
PG +GLPG G PGP G G G+PG P P GA S P D G
Sbjct: 801 LPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQ------ 854
Query: 293 IVDTVLAGVPGPRGP-----------------------PGPPG-------PPGPRGP--- 319
T L G PG +GP PG PG PGP+GP
Sbjct: 855 ---TGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGI 911
Query: 320 PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PGPPG PG GL G G G G+PG+ E G
Sbjct: 912 PGPPGPPGVPGLQGVPGNNGLPGQPGLTAELG 943
Score = 116 bits (291), Expect = 4e-26
Identities = 74/193 (38%), Positives = 87/193 (45%), Gaps = 29/193 (15%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE--------------KGPA 229
P H P+GP G G G GPPGSKG++G G +GP
Sbjct: 318 PCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGNDCVRISPDAPLQCAEGPK 377
Query: 230 GPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNG 285
G G G GP GLPG G G G G G G P + G + + P K G
Sbjct: 378 GEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQK--G 435
Query: 286 DSRLASAIVDTVLAGVPGPRGPPGPPG------PPGPRGPPGPPGTPGSQGLAGERGTVG 339
D + LAG PGP G PGPPG P P GPPGP G GS G+ G+ G G
Sbjct: 436 D---PGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGG 492
Query: 340 PSGEPGVKGEEGE 352
G+PGVKGE+G+
Sbjct: 493 KPGKPGVKGEKGD 505
Score = 115 bits (288), Expect = 8e-26
Identities = 78/196 (39%), Positives = 89/196 (45%), Gaps = 35/196 (17%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP---------------AGPPGLLGPPGPR 241
G G PG TG PG +G PG +G G GEKG AG PG GP G +
Sbjct: 691 GDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQ 750
Query: 242 GLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G P +GRPG PG PG G GP +G PP G A + G+
Sbjct: 751 G-PEGVGRPGKPGQPGLPGVQGPP--GLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGL 807
Query: 302 PGPRGPPGPPGPPG------------PRGPPG-----PPGTPGSQGLAGERGTVGPSGEP 344
PGPRGPPGP G G P GPPG PPG G QG G RGT G G
Sbjct: 808 PGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPR 867
Query: 345 GVKGEEGEKAATAEGE 360
G KGE GE + ++G+
Sbjct: 868 GEKGEPGECSCPSQGD 883
Score = 110 bits (275), Expect = 3e-24
Identities = 75/203 (36%), Positives = 88/203 (43%), Gaps = 43/203 (21%)
Query: 197 GPAGPPGQTGPPGPA--GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
GP+G G+ GPPG G G G+RG G+KG AG PG G PG G PG G PG G
Sbjct: 653 GPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQG 712
Query: 255 PPGP---------------------AGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASA 292
P GP AG PG P P QG +P G +
Sbjct: 713 PAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGP 772
Query: 293 IVDTVLAGVPGP-----RGPPGPPGP---------PGPRGPPGPPGTPGSQGLAGERGTV 338
+ G PGP +GP G PG PGPRGPPGP G G+QG G +G
Sbjct: 773 PGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGAT 832
Query: 339 GPSGEPGVK-----GEEGEKAAT 356
GP G PG G +G++ T
Sbjct: 833 GPVGPPGASVSGPPGRDGQQGQT 855
Score = 108 bits (269), Expect = 1e-23
Identities = 85/258 (32%), Positives = 97/258 (37%), Gaps = 97/258 (37%)
Query: 196 TGPAGPPG--QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG----------- 242
+G G PG G PG AG PG KG++G GE GPAG PG GP GP G
Sbjct: 575 SGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEP 634
Query: 243 ----------------LPGEMGRPGPPGPP--------------------GPAGNPG--- 263
LPG G G PGPP G AGNPG
Sbjct: 635 CPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPG 694
Query: 264 -------PSPNSPQGALYSLQPPTDKDNGDS---RLASAIVDTV-LAGVPGPRGPPGP-- 310
P + G P +K +G + L + D G PGP+G GP
Sbjct: 695 TPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEG 754
Query: 311 ---------------------------PGPP-----GPRGPPGPPGTPGSQGLAGERGTV 338
PGPP GP+G PG PG PG QGL G RG
Sbjct: 755 VGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPP 814
Query: 339 GPSGEPGVKGEEGEKAAT 356
GP+GE G +G G K AT
Sbjct: 815 GPTGEKGAQGSPGVKGAT 832
Score = 102 bits (253), Expect = 9e-22
Identities = 94/303 (31%), Positives = 108/303 (35%), Gaps = 124/303 (40%)
Query: 164 LPAPESTP-PTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQT--GPPGP---------A 211
LP P P PT + A P + TGP GPPG + GPPG
Sbjct: 807 LPGPRGPPGPTGEKG--------AQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLR 858
Query: 212 GPPGSKGDRGQTGEKG------------------------------PAGPPGLLGPPGPR 241
G PG KG RG+ GE G P GPPG+ GPPGP
Sbjct: 859 GTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPP 918
Query: 242 GLPGEMGRPGPPGPPGPAG----------------------------NPG---------- 263
G+PG G PG G PG G +PG
Sbjct: 919 GVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGD 978
Query: 264 ------PSPNSPQGALYSLQPPT------DKDNGDSRLASAIVDTVLAGVPGPRGPP--- 308
P ++ SL+ P D GD + G+PGP G P
Sbjct: 979 QGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGS------PGLPGPPGLPGQR 1032
Query: 309 ---------GPPGPPGPRGPPGPP---GTPGSQGLAGER---GTVGPSGEPGVKGEEGEK 353
G PGPPGP GPPG P G+PG GL GER G G GEPG G+ G
Sbjct: 1033 GEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYP 1092
Query: 354 AAT 356
AT
Sbjct: 1093 GAT 1095
Score = 100 bits (249), Expect = 3e-21
Identities = 77/218 (35%), Positives = 90/218 (41%), Gaps = 53/218 (24%)
Query: 159 SPDNDLPAPESTPPTWNEDFL--PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS 216
SPD L E E P +P + Q+ G G G G PG G PG
Sbjct: 365 SPDAPLQCAEGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGE 424
Query: 217 ---KGDRGQTGEKGPAGPPGLLGPPGPRGLPGE--MGRPGPPGPPGPAGNPGPSPNSPQG 271
G +GQ G+ G GP GL G PGP GLPG +G PG PG PG G PGP
Sbjct: 425 ICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPG--GPPGPK------ 476
Query: 272 ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPP-------- 323
D G S G+PG GP G PG PG +G G P
Sbjct: 477 ----------GDKGSS------------GIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLP 514
Query: 324 -------GTPGSQGLAGERGTVGPS-GEPGVKGEEGEK 353
G PG G GE G P+ G+PG++G +GEK
Sbjct: 515 EGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEK 552
Score = 93.6 bits (231), Expect = 3e-19
Identities = 75/243 (30%), Positives = 93/243 (38%), Gaps = 73/243 (30%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQ------------------TGEKGPAGP 231
P + G +G PG+ GP G G PG KG++G G+ GP G
Sbjct: 473 PGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGE 532
Query: 232 PG----LLGPPGPRGLPGEMGRP----------------------------GPPGPP--- 256
PG G PG +G+ GE G P G PG P
Sbjct: 533 PGDPVPARGDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRA 592
Query: 257 ---------------GPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
GPAG+PG P P P G + P + S L D +
Sbjct: 593 GVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDG--DVRVVA 650
Query: 301 VPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGE 360
+PGP G G PGPPG G PG G G +GL G++G G G+PG G G + E
Sbjct: 651 LPGPSGEKGEPGPPG-FGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGE-P 708
Query: 361 GVQ 363
GVQ
Sbjct: 709 GVQ 711
Score = 91.7 bits (226), Expect = 1e-18
Identities = 82/247 (33%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 157 PSSPDNDLPAPESTPPTWNEDFL----PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAG 212
P P D A + PP + F P P A Q G AG PG G G G
Sbjct: 1340 PGEPGTDGAAGKEGPPG-KQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMG 1398
Query: 213 PPGSKGDRGQTGEK---GPAGPPGLLGPPGPRG--------------------------- 242
P G G G+ G GP+G PGL G PG G
Sbjct: 1399 PVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYY 1458
Query: 243 -----LPGEM----GRPGPPGPPGPAGNPGPSPNSP----------QGALYSLQ--PPTD 281
P EM GRPGPPG G G PG +P SP + L ++ P T
Sbjct: 1459 TSRMQFPMEMAAAPGRPGPPGKDGAPGRPG-APGSPGLPGQIGREGRQGLPGVRGLPGTK 1517
Query: 282 KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
+ GD + +AG G GPPGP GPPG G G G G QG+ G G GP
Sbjct: 1518 GEKGD-------IGIGIAGENGLPGPPGPQGPPG-YGKMGATGPMGQQGIPGIPGPPGPM 1569
Query: 342 GEPGVKG 348
G+PG G
Sbjct: 1570 GQPGKAG 1576
Score = 85.1 bits (209), Expect = 1e-16
Identities = 66/202 (32%), Positives = 75/202 (37%), Gaps = 74/202 (36%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPG------------------SKGDRGQTGEKGPAG 230
V QR G G+ G G G PG ++GD + G+ G G
Sbjct: 960 VQGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSE-GDPGCVG 1018
Query: 231 PPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLA 290
PGL PGP GLPG+ G GPPG G G PGP + PP
Sbjct: 1019 SPGL---PGPPGLPGQRGEEGPPGMRGSPGPPGP-----------IGPP----------- 1053
Query: 291 SAIVDTVLAGVPGPRGP---------------------PGPPGPPGPRGPPGPPGTPGSQ 329
G PG G PGPPG PG G GPPG PG +
Sbjct: 1054 ---------GFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIK 1104
Query: 330 GLAGERGTVGPSGEPGVKGEEG 351
G G G+ G GEPG G EG
Sbjct: 1105 GERGYTGSAGEKGEPGPPGSEG 1126
Score = 72.0 bits (175), Expect = 1e-12
Identities = 43/103 (41%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 194 RPTGPAGP--PGQTGPPGPAGPPGSKGDRGQTGEKGP-----AGPPGLLGPPGPRGLPG- 245
RP P P PGQ G G G PG +G G GEKG AG GL GPPGP+G PG
Sbjct: 1486 RPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGY 1545
Query: 246 ----------EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQP 278
+ G PG PGPPGP G PG + + + P
Sbjct: 1546 GKMGATGPMGQQGIPGIPGPPGPMGQPGKAGHCNPSDCFGAMP 1588
Score = 61.2 bits (147), Expect = 2e-09
Identities = 35/74 (47%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G AG G GPPGP GPPG G G TG G G PG+ GPPGP MG+PG G
Sbjct: 1526 GIAGENGLPGPPGPQGPPGY-GKMGATGPMGQQGIPGIPGPPGP------MGQPGKAGHC 1578
Query: 257 GPAGNPGPSPNSPQ 270
P+ G P Q
Sbjct: 1579 NPSDCFGAMPMEQQ 1592
Score = 48.5 bits (114), Expect = 1e-05
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 23/76 (30%)
Query: 307 PPGPPGPPGPRGPPGPPGTPGSQGLAG--------------------ER---GTVGPSGE 343
P GP G G RG PGPPG+ G +G G E+ G +GPSG
Sbjct: 332 PSGPKGGKGERGLPGPPGSKGEKGARGNDCVRISPDAPLQCAEGPKGEKGESGALGPSGL 391
Query: 344 PGVKGEEGEKAATAEG 359
PG GE+G+K +G
Sbjct: 392 PGSTGEKGQKGEKGDG 407
Score = 37.7 bits (86), Expect = 0.021
Identities = 27/74 (36%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 195 PTGPAGPPGQ-----TGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P GP GPPG TGP G G PG G GQ G+ G P G +P E
Sbjct: 1536 PPGPQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKAGHCNPSDCFG-----AMPME 1590
Query: 247 MGRPGPPGPPGPAG 260
P GP G
Sbjct: 1591 QQYPPMKTMKGPFG 1604
Score = 31.6 bits (70), Expect = 1.5
Identities = 20/61 (32%), Positives = 22/61 (36%)
Query: 310 PPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQQLREAL 369
PP G R G +G GERG GP G G KG G + Q E
Sbjct: 317 PPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGNDCVRISPDAPLQCAEGP 376
Query: 370 K 370
K
Sbjct: 377 K 377
>gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo
sapiens]
Length = 921
Score = 142 bits (358), Expect = 6e-34
Identities = 91/231 (39%), Positives = 109/231 (47%), Gaps = 45/231 (19%)
Query: 187 HPVPRQRRP---TGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
H +P + P T GPPG+ GPPGP GPPG G G G++GP GPP GPPGP G
Sbjct: 253 HELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPP---GPPGPAGE 309
Query: 244 PGEMGRPGPPGPP------GPAGNPG----------PSPNSPQGALYSLQPPTDKDNGDS 287
PG+ G PG PG P GP G+PG P +G P G +
Sbjct: 310 PGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGPPGTA 369
Query: 288 RLASAIVDTVLAGVPGPRGPPGPPGPPGPRG---------------PPGPPGTPGSQGLA 332
L + G PG RGPPGPPGPPGPRG PPG G PG G+
Sbjct: 370 GLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMR 429
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAE-GE-------GVQQLREALKILAER 375
G +G G GEPG +G +GE+ E GE G Q LR I+ ++
Sbjct: 430 GHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDK 480
Score = 126 bits (316), Expect = 4e-29
Identities = 71/169 (42%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTG---EKGPAGPPGLLGPPGPRGLPGE 246
P ++ G G G+ G G GPPG++G RG TG +KG G GL G PGP+GLPG
Sbjct: 441 PGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGA 500
Query: 247 MGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRG 306
G G GPPG AG G + L P GD+ L + G+PG +G
Sbjct: 501 PGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGP----KGDTGLPGVDGRDGIPGMPGTKG 556
Query: 307 PPGPPGPPGP---RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
PG PGPPG +G PG PG PG++G+AGE+G+ G G+PG G G+
Sbjct: 557 EPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGK 605
Score = 125 bits (313), Expect = 1e-28
Identities = 79/204 (38%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G +G PGQ GPPG GP G +G G GE GP G PGL G G G PG G PGPPG P
Sbjct: 601 GNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLP 660
Query: 257 GPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
G G+ G P P QGA + G++ + D G+PGP+G G PG
Sbjct: 661 GMKGDRGVVGEPGPKGEQGA--------SGEEGEAGERGELGD---IGLPGPKGSAGNPG 709
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQQLREALKIL 372
PG RGP G G PG +G G G G GE G G G + Q +++ +
Sbjct: 710 EPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQ----V 765
Query: 373 AERVLILEHMIGIHDPLASPEGGS 396
RV I EH + L P+ G+
Sbjct: 766 CMRV-IQEHFAEMAASLKRPDSGA 788
Score = 122 bits (307), Expect = 5e-28
Identities = 70/155 (45%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G PG G G GPPG G +G G +G G PGL GP G GLPG GR G PG P
Sbjct: 493 GPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMP 552
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
G G PG P P A P G +A T G PG G G G PG
Sbjct: 553 GTKGEPG-KPGPPGDAGLQGLPGVPGIPGAKGVAGEKGST---GAPGKPGQMGNSGKPGQ 608
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
+GPPG G G QGL G RG +GP G PG+ G+ G
Sbjct: 609 QGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLG 643
Score = 121 bits (304), Expect = 1e-27
Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 44/207 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G G PG G PGP G PG KGDRG GE GP G G G G G GE+G G PGP
Sbjct: 643 GSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK 702
Query: 257 GPAGNPG----------------------PSPNSPQG-----ALYSLQPPTDKDNGDSRL 289
G AGNPG P P QG L +Q P + D +
Sbjct: 703 GSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHI 762
Query: 290 ASAIV-----------------DTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLA 332
+ D+ G+PG GPPGPPGPPG G PG G G G+
Sbjct: 763 KQVCMRVIQEHFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIK 822
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEG 359
G G +G G G GE+GE+ G
Sbjct: 823 GPPGALGLRGPKGDLGEKGERGPPGRG 849
Score = 111 bits (278), Expect = 1e-24
Identities = 79/195 (40%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGP------------PGQTGPPGPAGPPGSKGDRGQTGEKG 227
P +P A QR P G AGP PG GP G G PG G G G G
Sbjct: 494 PQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPG 553
Query: 228 PAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGP--SPNSPQGALYSLQPPTDKDNG 285
G PG GPPG GL G G PG PG G AG G +P P S +P G
Sbjct: 554 TKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPG 613
Query: 286 DSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPG 345
+ G GP G PG PG G G PG PG PG GL G +G G GEPG
Sbjct: 614 EVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPG 673
Query: 346 VKGEEGEKAATAEGE 360
KGE+G A+ EGE
Sbjct: 674 PKGEQG--ASGEEGE 686
Score = 106 bits (264), Expect = 5e-23
Identities = 84/230 (36%), Positives = 90/230 (39%), Gaps = 70/230 (30%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA 211
EA ER D LP P+ + E P R P G G PG GP GP
Sbjct: 686 EAGERGELGDIGLPGPKGSAGNPGE-------------PGLRGPEGSRGLPGVEGPRGPP 732
Query: 212 GPPGSKGDRGQTGEKGPAGPPG--------------------------LLGPP-GPRGLP 244
GP G +G++G TG G GPPG L P G GLP
Sbjct: 733 GPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEMAASLKRPDSGATGLP 792
Query: 245 GEMGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTD---------KDNGDSR 288
G G PGPPGPPG G PG P P GAL P D G +
Sbjct: 793 GRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPNG 852
Query: 289 LASAIVDTVLAGVPGP-----------RGPPGPPGPPGPRGPPGPPGTPG 327
L AI L G PGP RGPPG G PG GPPGPPG PG
Sbjct: 853 LPGAIG---LPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGLPG 899
Score = 42.0 bits (97), Expect = 0.001
Identities = 37/102 (36%), Positives = 40/102 (39%), Gaps = 25/102 (24%)
Query: 168 ESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPP--GQTGPPGPAGPPGSKGDRGQTGE 225
E PP + LP AI L G GP G+ G G GPP
Sbjct: 842 ERGPPGRGPNGLPGAIGLP----------GDPGPASYGRNGRDGERGPP----------- 880
Query: 226 KGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGP-AGNPGPSP 266
G AG PG+ GPPGP GLPG G A N GP P
Sbjct: 881 -GVAGIPGVPGPPGPPGLPGFCEPASCTMQAGQRAFNKGPDP 921
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 142 bits (358), Expect = 6e-34
Identities = 86/200 (43%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 172 PTWNEDF-----LPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS-----KGDRG 221
PT E F LP AI +P Q GP G G G PGP GPPGS KGD+G
Sbjct: 1217 PTGIEGFPGPPGLPGAI-----IPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKG 1271
Query: 222 QTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-------PSPNSPQGALY 274
G GP GPPG G GP PG +G PG PG PGP G+PG G L
Sbjct: 1272 SMGHPGPKGPPGTAGDMGP---PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLG 1328
Query: 275 SLQPPTD-KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAG 333
S+ PP G + + +PG GPPG PG PG +G PGPPG PG+ G G
Sbjct: 1329 SIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCG 1388
Query: 334 ERGTVGPSGEPGVKGEEGEK 353
RG G G+PG G GEK
Sbjct: 1389 PRGKPGKDGKPGTPGPAGEK 1408
Score = 132 bits (333), Expect = 5e-31
Identities = 78/174 (44%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR----P 250
P G G PG GP GPAGPPG G +G+ G +G G PG GPPG G GE+ P
Sbjct: 597 PPGDPGSPGSPGPAGPAGPPGY-GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
GPPGPPGP G+PGP P G SL D G+PGP G PG
Sbjct: 656 GPPGPPGPPGHPGPQ--GPPGIPGSLGKCGDP-----------------GLPGPDGEPGI 696
Query: 311 PG-----PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
PG PPGP+G G PGT GS G G+ G G G+PG+ G +GE A G
Sbjct: 697 PGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPG 750
Score = 127 bits (318), Expect = 3e-29
Identities = 91/232 (39%), Positives = 101/232 (43%), Gaps = 70/232 (30%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---------PGP 240
P P GP G PG G PG G PG GD G G KG GPPG+ GP PGP
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 241 RGLPGEMGRPGPPG-------------PPGPAGNPGP--------SPNSP-----QGALY 274
G+ G+ GR G PG PPGP GNPG +P P +GA+
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMG 1210
Query: 275 SLQP--PTDKDN--GDSRLASAIV--DTVLAGVPGPRGPPGPPGPPGP------------ 316
P PT + G L AI+ T G PG RG PG PGPPGP
Sbjct: 1211 DAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDK 1270
Query: 317 -----RGPPGPPGT------------PGSQGLAGERGTVGPSGEPGVKGEEG 351
GP GPPGT PG+ GL G RG G G PGVKGE+G
Sbjct: 1271 GSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKG 1322
Score = 126 bits (316), Expect = 4e-29
Identities = 81/189 (42%), Positives = 87/189 (46%), Gaps = 38/189 (20%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG----PAGPPGLLGPPGPRGLPGEMGRPGP 252
G G PG TG PG G PG++GD G GEKG P G G+ G PG RG PG G G
Sbjct: 511 GSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGI 570
Query: 253 PGPPGPAGNPGP--------------------SPNSPQGALYSLQPPTDKDNGDSRLASA 292
PG PG G PGP SP SP G PP G+ L
Sbjct: 571 PGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSP-GPAGPAGPPGYGPQGEPGLQGT 629
Query: 293 IVDTVLAGVPG---PRG----------PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
G PG PRG PPGPPGPPG GP GPPG PGS G G+ G G
Sbjct: 630 QGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPG 689
Query: 340 PSGEPGVKG 348
P GEPG+ G
Sbjct: 690 PDGEPGIPG 698
Score = 124 bits (311), Expect = 2e-28
Identities = 73/187 (39%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 197 GPAGPPGQT-----GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
G G PG + GPPGP G PG GD G+ GE G GPPG LGP GP G PG G PG
Sbjct: 1051 GDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPG 1110
Query: 252 PPGPPGPAGNPG----------PSPNSPQG--------ALYSLQPPTDKDNGDSRLASAI 293
PG PGP G+ G P P G ++ +D
Sbjct: 1111 LPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKG 1170
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
+L PGPRG PG G G RG PG PG PG +G G+ G GP+G G G G
Sbjct: 1171 ETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLP 1230
Query: 354 AATAEGE 360
A G+
Sbjct: 1231 GAIIPGQ 1237
Score = 122 bits (306), Expect = 6e-28
Identities = 77/200 (38%), Positives = 96/200 (48%), Gaps = 40/200 (20%)
Query: 192 QRRPTGPAGPPG-----QTGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
+R TGP G PG ++G PG G PG +G+ G G++G G PG+LGPPG G+
Sbjct: 831 RRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGV 890
Query: 244 PGEMGRPGPPGPPGPAGNPG----------PSPNSPQGALYSLQPPTDKDN-GDSRLASA 292
G MG PG GPPGP GNPG P +G + DK N G S ++
Sbjct: 891 IGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHV 950
Query: 293 IVD---------------------TVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGL 331
I D + G+ G +G PGP GPPGPRG G G PG GL
Sbjct: 951 IGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGL 1010
Query: 332 AGERGTVGPSGEPGVKGEEG 351
G G++G G PG KG+ G
Sbjct: 1011 RGIPGSMGNMGMPGSKGKRG 1030
Score = 121 bits (304), Expect = 1e-27
Identities = 81/198 (40%), Positives = 97/198 (48%), Gaps = 42/198 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGPRGLPGE--MGRPGP 252
GP GP G GP GP+GPPG G G + G +G G PGL G G RG PG+ MG PG
Sbjct: 360 GPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGS 419
Query: 253 PG---PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPG 309
PG PG G+PGP P P ++ PP GD L + + GV GP+G PG
Sbjct: 420 PGCAGSPGLPGSPGP-PGPPGDIVFRKGPP-----GDHGLPGYLGSPGIPGVDGPKGEPG 473
Query: 310 P--------PGPPGPRGPPG------------------PPGTPGSQGLAGERGTVGPSGE 343
PGPPG G PG PG+PG+ GL G G G G+
Sbjct: 474 LLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGD 533
Query: 344 PGVKGEEGEKAATAEGEG 361
PG+KGE+GE T + EG
Sbjct: 534 PGLKGEKGE---TLQPEG 548
Score = 120 bits (301), Expect = 2e-27
Identities = 82/177 (46%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 190 PRQRRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P Q+ TGP G PG GP PG G GSKG RG +G G +G PGL G PG G G
Sbjct: 60 PGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 247 MGRPGPPGPPGPAGNPGPS-----PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+G PG G G G PG P P A Q D L A D L G
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIEL-DAKGDPGLPGA 178
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP--GVKGEEGEKAAT 356
PGP+G PGPPG PGP GPPGPPG G G G RG G GE G KGE G K T
Sbjct: 179 PGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLT 235
Score = 117 bits (292), Expect = 3e-26
Identities = 83/218 (38%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 190 PRQRRPTGPAGPPGQ-----------TGPPGPAGPPGSKGDRGQT-------GEKGPAGP 231
P P GPAGPPG G PG GPPG G RG+ G GP GP
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 232 PGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG------PSPNSPQGALYSLQPPTDKDNG 285
PG GP GP G+PG +G+ G PG PGP G PG P P P+G P T G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGF--PGTKGSLG 721
Query: 286 DSRLASAIVDTVLAGVPGPRGPP--------GPPGPPGPRGP---------PGPPGTPGS 328
G+PG +G P G PG PG RG PG PG PG+
Sbjct: 722 CPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGT 781
Query: 329 QGLAGERGTVGPSGEPGVKGEEGEKAATAEG-EGVQQL 365
G G G G G+PG GE+G EG G Q L
Sbjct: 782 PGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Score = 116 bits (290), Expect = 5e-26
Identities = 80/200 (40%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGP------------ 240
P GP GPPG G PG GP G KG G+ G KG G GL GPPGP
Sbjct: 193 PVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPD 252
Query: 241 -----RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYS--LQPPTDKDN-----GDSR 288
+G G+ G G PGPPGP+G PG S S +GA LQ KD G
Sbjct: 253 NRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEG 312
Query: 289 LASAIVDTVLAGVPGPRGPPGPPGPPGPRGPP---------GPPGTPGSQGLAGERGTVG 339
+ L G G +G G GPPG RGP G GTPG G G RG G
Sbjct: 313 VKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQG 372
Query: 340 PSGEPGVKGEEGEKAATAEG 359
PSG PGV G G G
Sbjct: 373 PSGPPGVPGSPGSSRPGLRG 392
Score = 115 bits (287), Expect = 1e-25
Identities = 77/210 (36%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAG--------------------------PPGS 216
+ ++ PVP P GP G PG GPPG G PPG
Sbjct: 648 LSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Query: 217 KGDRGQTGEKGPAGPPGLLGP---PGPRGLPGEMGRP--GPPGPPGPAGNPGPSPNSPQG 271
KGD+G G KG G PG +G PG GLPG G P PG PG G PG NS +
Sbjct: 708 KGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEH 767
Query: 272 ALYSLQ--PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP------- 322
L P G+ G+ GPRG PG PGPPG +GPPG
Sbjct: 768 GEIGLPGLPGLPGTPGNE------------GLDGPRGDPGQPGPPGEQGPPGRCIEGPRG 815
Query: 323 ----PGTPGSQGLAGERGTVGPSGEPGVKG 348
PG G +G G RG GP G+PG+ G
Sbjct: 816 AQGLPGLNGLKGQQGRRGKTGPKGDPGIPG 845
Score = 113 bits (282), Expect = 4e-25
Identities = 81/201 (40%), Positives = 88/201 (43%), Gaps = 40/201 (19%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGP------------------------PGSKGDRGQTG 224
VP G G PG GPPGP G PGSKG RG G
Sbjct: 974 VPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLG 1033
Query: 225 EKGPAGPPGLLGPPGPRGLPGEMGRPG-----PPGPPGPAGNPG-PSPNSPQGALYSLQP 278
G AG PGL PG GL G+ G PG PGPPGP G+PG P +G + P
Sbjct: 1034 FPGRAGRPGL---PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 279 PTD-KDNGDSRLASAIVDTVLAGVPGP------RGPPGPPGPPGPRGPPGPPGTPGSQGL 331
P G + L G PGP +G G GPPG RGPPG PG PGS G
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 332 AGERGTVGPSGEPGVKGEEGE 352
G RG G G PG GE+GE
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGE 1171
Score = 112 bits (281), Expect = 5e-25
Identities = 83/233 (35%), Positives = 98/233 (42%), Gaps = 69/233 (29%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPP---------GSKGDRGQTGE-----KGPAGPPGL 234
+P P G GPPG GP GP GPP G +G +G GE KG G GL
Sbjct: 175 LPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGL 234
Query: 235 LGPPGP-----------------RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGAL--YS 275
GPPGP +G G+ G G PGPPGP+G PG S S +GA
Sbjct: 235 TGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPG 294
Query: 276 LQPPTDKD-----------NGDSRLASAIVDTVLAGVPGPRGPP---------------- 308
LQ KD G+ + + + G G GPP
Sbjct: 295 LQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKG 354
Query: 309 --GPPGPPGPR------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PGPPGPR GP GPPG PGS G + G G G PG+KG +GE+
Sbjct: 355 DEGTPGPPGPRGARGPQGPSGPPGVPGSPG-SSRPGLRGAPGWPGLKGSKGER 406
Score = 111 bits (278), Expect = 1e-24
Identities = 76/208 (36%), Positives = 86/208 (41%), Gaps = 44/208 (21%)
Query: 197 GPAGPPGQTGPPGPAGP--PGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G G P P GP P PG +G+ G+ GE G G PGL G PG GL G G PG PG
Sbjct: 739 GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPG 798
Query: 255 PPGPAGNPGPSPNSPQGA-----LYSLQ-----------------PPTDKDNGDSRLASA 292
PPG G PG P+GA L L+ P D+ S
Sbjct: 799 PPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSP 858
Query: 293 IV-----------DTVLAGVPGPRGPPGP---------PGPPGPRGPPGPPGTPGSQGLA 332
+ G PG GPPG PG GP GPPG PGTPG +G
Sbjct: 859 GIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSP 918
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEGE 360
G G G G PG KGE+G+K E
Sbjct: 919 GIPGVKGQRGTPGAKGEQGDKGNPGPSE 946
Score = 109 bits (272), Expect = 6e-24
Identities = 85/254 (33%), Positives = 100/254 (39%), Gaps = 47/254 (18%)
Query: 151 LEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQ------ 204
L+A P P P PP + P P P P GP G G+
Sbjct: 167 LDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHK 226
Query: 205 --------TGPPGPAGP--------------PGSKGDRGQTGEKGPAGPPGL-------- 234
TGPPGP G G KGD+G GE GP GP GL
Sbjct: 227 GERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSE 286
Query: 235 ---LGPPGPRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDS 287
G PG +G PG+ G PG PG G GN G + +G + PP + G +
Sbjct: 287 KGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFR--GPT 344
Query: 288 RLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQ--GLAGERGTVGPSGEPG 345
+ G PGP GP G GP GP GPPG PG+PGS GL G G G G G
Sbjct: 345 EYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG 404
Query: 346 VKGEEGEKAATAEG 359
+G G+ A G
Sbjct: 405 ERGRPGKDAMGTPG 418
Score = 108 bits (270), Expect = 1e-23
Identities = 80/204 (39%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 197 GPAGPPG----QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL--------GPPGPRGLP 244
GP GPPG + GPPG G PG G G G GP G PGLL GPPG GLP
Sbjct: 433 GPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLP 492
Query: 245 GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV------- 297
G G G PG G AG G SP SP P GD L +T+
Sbjct: 493 GLHGVKGIPGRQGAAGLKG-SPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVG 551
Query: 298 ------LAGVPGPRGPPGPPGPPGPR------------------GPPGPPGTPGSQGLAG 333
L G PG +G G PG PG + GPPG PG+PGS G AG
Sbjct: 552 VPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAG 611
Query: 334 ERGT--VGPSGEPGVKGEEGEKAA 355
G GP GEPG++G +G A
Sbjct: 612 PAGPPGYGPQGEPGLQGTQGVPGA 635
Score = 107 bits (267), Expect = 2e-23
Identities = 81/227 (35%), Positives = 97/227 (42%), Gaps = 58/227 (25%)
Query: 188 PVPRQRR-PTGPAGPPGQTGPPGPAGP-----------PGSKGDRGQTGEK--------- 226
P PR R P GP+GPPG G PG + P GSKG+RG+ G+
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 227 -----------GPAGPPGLL----GPPGPRGLPGEMGRPGPPGPPGPAGNPG-------- 263
GP GPPG + GPPG GLPG +G PG PG GP G PG
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPY 481
Query: 264 -PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG----- 315
P P G L+ ++ + G + L + G+PG G PG G PG
Sbjct: 482 IPGPPGLPGLPGLHGVKGIPGRQ-GAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK 540
Query: 316 -----PRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
P G G PG PG +G G +G G G PGVKG G K A
Sbjct: 541 GETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELA 587
Score = 107 bits (267), Expect = 2e-23
Identities = 78/204 (38%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA---------GPPG 215
P P P T + P IP V QR G G G G PGP+ G PG
Sbjct: 903 PGPPGNPGTPGQRGSP-GIP---GVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPG 958
Query: 216 SKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALY 274
KG G GEKG G PG+ G G +GLPG G PGP G G GNPG P G++
Sbjct: 959 LKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMG 1018
Query: 275 SLQPPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPPG-PPGPR-GPPGPPGTPGSQGL 331
++ P K G L G+ G +G G PG G R GPPGP G PG G
Sbjct: 1019 NMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGD 1078
Query: 332 AGERGTVGPSGEPGVKGEEGEKAA 355
G++G +G G PG G G + A
Sbjct: 1079 MGKKGEMGQPGPPGHLGPAGPEGA 1102
Score = 104 bits (259), Expect = 2e-22
Identities = 65/172 (37%), Positives = 72/172 (41%), Gaps = 22/172 (12%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP------------------P 238
G G PG G G G PG G+ G G+KG GPPG GP P
Sbjct: 303 GVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPP 362
Query: 239 GPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
GPRG G G GPPG PG G+ P G ++
Sbjct: 363 GPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGC 422
Query: 299 AGVPGPRGPPGPPGPPGP----RGPPGPPGTPGSQGLAGERGTVGPSGEPGV 346
AG PG G PGPPGPPG +GPPG G PG G G G GP GEPG+
Sbjct: 423 AGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGL 474
Score = 96.7 bits (239), Expect = 4e-20
Identities = 70/186 (37%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG G PG G PG G +GQ G G G G G PGP + +G G PG
Sbjct: 901 GPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLK 960
Query: 257 GPAGNPGPS-----PNSPQ-GALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G AGNPG P P L L P L S T G PG RG PG
Sbjct: 961 GFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGS----TGNPGEPGLRGIPGS 1016
Query: 311 ------PGPPGPRGP------PGPPGTPGSQGLAGER-----------GTVGPSGEPGVK 347
PG G RG G PG PG GL G++ G GP+G+PG+
Sbjct: 1017 MGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLP 1076
Query: 348 GEEGEK 353
G+ G+K
Sbjct: 1077 GDMGKK 1082
Score = 93.6 bits (231), Expect = 3e-19
Identities = 46/91 (50%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 195 PTGPAGPPGQTGPPGPA---------GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P GP GPPG G PG GPPG+ G+ G GE GP GPPG LGP GPRG PG
Sbjct: 1335 PIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPG 1394
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSL 276
+ G+PG PGP G GN G S P+ + L
Sbjct: 1395 KDGKPGTPGPAGEKGNKG-SKGEPESLFHQL 1424
Score = 89.4 bits (220), Expect = 6e-18
Identities = 62/167 (37%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 211 AGPPGSKG----DRGQT---GEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG 263
A P SKG D+GQ G KG G G GPPG G G G G PGP GP G PG
Sbjct: 23 AAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPG 82
Query: 264 -PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGP--- 319
P +G ++G+PG G PG PG PG GP
Sbjct: 83 LPGLTGSKGV-----------------------RGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 320 ---PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQ 363
PG G+ G QG G GT+G G PG G +G+K A A+ E ++
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIE 166
Score = 87.4 bits (215), Expect = 2e-17
Identities = 64/201 (31%), Positives = 70/201 (34%), Gaps = 71/201 (35%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPR-------QRRPTGPAGPPGQTGPPGPAGPPGSK 217
P P P + D + HP P+ P G G PG G PGP G PG +
Sbjct: 1253 PGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQ 1312
Query: 218 GDRGQTGEKG---------------PAGPPGLLG---------------PPGPRGLPGEM 247
G G GEKG P GPPG+ G PPG G PG
Sbjct: 1313 GFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQ 1372
Query: 248 GRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGP 307
G PGPPGPPG G GP G PG G
Sbjct: 1373 GEPGPPGPPGNLGPCGP----------------------------------RGKPGKDGK 1398
Query: 308 PGPPGPPGPRGPPGPPGTPGS 328
PG PGP G +G G G P S
Sbjct: 1399 PGTPGPAGEKGNKGSKGEPES 1419
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 142 bits (358), Expect = 6e-34
Identities = 86/200 (43%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 172 PTWNEDF-----LPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS-----KGDRG 221
PT E F LP AI +P Q GP G G G PGP GPPGS KGD+G
Sbjct: 1217 PTGIEGFPGPPGLPGAI-----IPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKG 1271
Query: 222 QTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-------PSPNSPQGALY 274
G GP GPPG G GP PG +G PG PG PGP G+PG G L
Sbjct: 1272 SMGHPGPKGPPGTAGDMGP---PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLG 1328
Query: 275 SLQPPTD-KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAG 333
S+ PP G + + +PG GPPG PG PG +G PGPPG PG+ G G
Sbjct: 1329 SIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCG 1388
Query: 334 ERGTVGPSGEPGVKGEEGEK 353
RG G G+PG G GEK
Sbjct: 1389 PRGKPGKDGKPGTPGPAGEK 1408
Score = 132 bits (333), Expect = 5e-31
Identities = 78/174 (44%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR----P 250
P G G PG GP GPAGPPG G +G+ G +G G PG GPPG G GE+ P
Sbjct: 597 PPGDPGSPGSPGPAGPAGPPGY-GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
GPPGPPGP G+PGP P G SL D G+PGP G PG
Sbjct: 656 GPPGPPGPPGHPGPQ--GPPGIPGSLGKCGDP-----------------GLPGPDGEPGI 696
Query: 311 PG-----PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
PG PPGP+G G PGT GS G G+ G G G+PG+ G +GE A G
Sbjct: 697 PGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPG 750
Score = 127 bits (318), Expect = 3e-29
Identities = 91/232 (39%), Positives = 101/232 (43%), Gaps = 70/232 (30%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---------PGP 240
P P GP G PG G PG G PG GD G G KG GPPG+ GP PGP
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 241 RGLPGEMGRPGPPG-------------PPGPAGNPGP--------SPNSP-----QGALY 274
G+ G+ GR G PG PPGP GNPG +P P +GA+
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMG 1210
Query: 275 SLQP--PTDKDN--GDSRLASAIV--DTVLAGVPGPRGPPGPPGPPGP------------ 316
P PT + G L AI+ T G PG RG PG PGPPGP
Sbjct: 1211 DAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDK 1270
Query: 317 -----RGPPGPPGT------------PGSQGLAGERGTVGPSGEPGVKGEEG 351
GP GPPGT PG+ GL G RG G G PGVKGE+G
Sbjct: 1271 GSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKG 1322
Score = 126 bits (316), Expect = 4e-29
Identities = 81/189 (42%), Positives = 87/189 (46%), Gaps = 38/189 (20%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG----PAGPPGLLGPPGPRGLPGEMGRPGP 252
G G PG TG PG G PG++GD G GEKG P G G+ G PG RG PG G G
Sbjct: 511 GSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGI 570
Query: 253 PGPPGPAGNPGP--------------------SPNSPQGALYSLQPPTDKDNGDSRLASA 292
PG PG G PGP SP SP G PP G+ L
Sbjct: 571 PGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSP-GPAGPAGPPGYGPQGEPGLQGT 629
Query: 293 IVDTVLAGVPG---PRG----------PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
G PG PRG PPGPPGPPG GP GPPG PGS G G+ G G
Sbjct: 630 QGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPG 689
Query: 340 PSGEPGVKG 348
P GEPG+ G
Sbjct: 690 PDGEPGIPG 698
Score = 124 bits (311), Expect = 2e-28
Identities = 73/187 (39%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 197 GPAGPPGQT-----GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
G G PG + GPPGP G PG GD G+ GE G GPPG LGP GP G PG G PG
Sbjct: 1051 GDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPG 1110
Query: 252 PPGPPGPAGNPG----------PSPNSPQG--------ALYSLQPPTDKDNGDSRLASAI 293
PG PGP G+ G P P G ++ +D
Sbjct: 1111 LPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKG 1170
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
+L PGPRG PG G G RG PG PG PG +G G+ G GP+G G G G
Sbjct: 1171 ETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLP 1230
Query: 354 AATAEGE 360
A G+
Sbjct: 1231 GAIIPGQ 1237
Score = 122 bits (306), Expect = 6e-28
Identities = 77/200 (38%), Positives = 96/200 (48%), Gaps = 40/200 (20%)
Query: 192 QRRPTGPAGPPG-----QTGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
+R TGP G PG ++G PG G PG +G+ G G++G G PG+LGPPG G+
Sbjct: 831 RRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGV 890
Query: 244 PGEMGRPGPPGPPGPAGNPG----------PSPNSPQGALYSLQPPTDKDN-GDSRLASA 292
G MG PG GPPGP GNPG P +G + DK N G S ++
Sbjct: 891 IGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHV 950
Query: 293 IVD---------------------TVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGL 331
I D + G+ G +G PGP GPPGPRG G G PG GL
Sbjct: 951 IGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGL 1010
Query: 332 AGERGTVGPSGEPGVKGEEG 351
G G++G G PG KG+ G
Sbjct: 1011 RGIPGSMGNMGMPGSKGKRG 1030
Score = 121 bits (304), Expect = 1e-27
Identities = 81/198 (40%), Positives = 97/198 (48%), Gaps = 42/198 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGPRGLPGE--MGRPGP 252
GP GP G GP GP+GPPG G G + G +G G PGL G G RG PG+ MG PG
Sbjct: 360 GPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGS 419
Query: 253 PG---PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPG 309
PG PG G+PGP P P ++ PP GD L + + GV GP+G PG
Sbjct: 420 PGCAGSPGLPGSPGP-PGPPGDIVFRKGPP-----GDHGLPGYLGSPGIPGVDGPKGEPG 473
Query: 310 P--------PGPPGPRGPPG------------------PPGTPGSQGLAGERGTVGPSGE 343
PGPPG G PG PG+PG+ GL G G G G+
Sbjct: 474 LLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGD 533
Query: 344 PGVKGEEGEKAATAEGEG 361
PG+KGE+GE T + EG
Sbjct: 534 PGLKGEKGE---TLQPEG 548
Score = 120 bits (301), Expect = 2e-27
Identities = 82/177 (46%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 190 PRQRRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P Q+ TGP G PG GP PG G GSKG RG +G G +G PGL G PG G G
Sbjct: 60 PGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 247 MGRPGPPGPPGPAGNPGPS-----PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+G PG G G G PG P P A Q D L A D L G
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIEL-DAKGDPGLPGA 178
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP--GVKGEEGEKAAT 356
PGP+G PGPPG PGP GPPGPPG G G G RG G GE G KGE G K T
Sbjct: 179 PGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLT 235
Score = 117 bits (292), Expect = 3e-26
Identities = 83/218 (38%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 190 PRQRRPTGPAGPPGQ-----------TGPPGPAGPPGSKGDRGQT-------GEKGPAGP 231
P P GPAGPPG G PG GPPG G RG+ G GP GP
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 232 PGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG------PSPNSPQGALYSLQPPTDKDNG 285
PG GP GP G+PG +G+ G PG PGP G PG P P P+G P T G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGF--PGTKGSLG 721
Query: 286 DSRLASAIVDTVLAGVPGPRGPP--------GPPGPPGPRGP---------PGPPGTPGS 328
G+PG +G P G PG PG RG PG PG PG+
Sbjct: 722 CPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGT 781
Query: 329 QGLAGERGTVGPSGEPGVKGEEGEKAATAEG-EGVQQL 365
G G G G G+PG GE+G EG G Q L
Sbjct: 782 PGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Score = 116 bits (290), Expect = 5e-26
Identities = 80/200 (40%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGP------------ 240
P GP GPPG G PG GP G KG G+ G KG G GL GPPGP
Sbjct: 193 PVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPD 252
Query: 241 -----RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYS--LQPPTDKDN-----GDSR 288
+G G+ G G PGPPGP+G PG S S +GA LQ KD G
Sbjct: 253 NRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEG 312
Query: 289 LASAIVDTVLAGVPGPRGPPGPPGPPGPRGPP---------GPPGTPGSQGLAGERGTVG 339
+ L G G +G G GPPG RGP G GTPG G G RG G
Sbjct: 313 VKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQG 372
Query: 340 PSGEPGVKGEEGEKAATAEG 359
PSG PGV G G G
Sbjct: 373 PSGPPGVPGSPGSSRPGLRG 392
Score = 115 bits (287), Expect = 1e-25
Identities = 77/210 (36%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAG--------------------------PPGS 216
+ ++ PVP P GP G PG GPPG G PPG
Sbjct: 648 LSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Query: 217 KGDRGQTGEKGPAGPPGLLGP---PGPRGLPGEMGRP--GPPGPPGPAGNPGPSPNSPQG 271
KGD+G G KG G PG +G PG GLPG G P PG PG G PG NS +
Sbjct: 708 KGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEH 767
Query: 272 ALYSLQ--PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP------- 322
L P G+ G+ GPRG PG PGPPG +GPPG
Sbjct: 768 GEIGLPGLPGLPGTPGNE------------GLDGPRGDPGQPGPPGEQGPPGRCIEGPRG 815
Query: 323 ----PGTPGSQGLAGERGTVGPSGEPGVKG 348
PG G +G G RG GP G+PG+ G
Sbjct: 816 AQGLPGLNGLKGQQGRRGKTGPKGDPGIPG 845
Score = 113 bits (282), Expect = 4e-25
Identities = 81/201 (40%), Positives = 88/201 (43%), Gaps = 40/201 (19%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGP------------------------PGSKGDRGQTG 224
VP G G PG GPPGP G PGSKG RG G
Sbjct: 974 VPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLG 1033
Query: 225 EKGPAGPPGLLGPPGPRGLPGEMGRPG-----PPGPPGPAGNPG-PSPNSPQGALYSLQP 278
G AG PGL PG GL G+ G PG PGPPGP G+PG P +G + P
Sbjct: 1034 FPGRAGRPGL---PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 279 PTD-KDNGDSRLASAIVDTVLAGVPGP------RGPPGPPGPPGPRGPPGPPGTPGSQGL 331
P G + L G PGP +G G GPPG RGPPG PG PGS G
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 332 AGERGTVGPSGEPGVKGEEGE 352
G RG G G PG GE+GE
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGE 1171
Score = 112 bits (281), Expect = 5e-25
Identities = 83/233 (35%), Positives = 98/233 (42%), Gaps = 69/233 (29%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPP---------GSKGDRGQTGE-----KGPAGPPGL 234
+P P G GPPG GP GP GPP G +G +G GE KG G GL
Sbjct: 175 LPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGL 234
Query: 235 LGPPGP-----------------RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGAL--YS 275
GPPGP +G G+ G G PGPPGP+G PG S S +GA
Sbjct: 235 TGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPG 294
Query: 276 LQPPTDKD-----------NGDSRLASAIVDTVLAGVPGPRGPP---------------- 308
LQ KD G+ + + + G G GPP
Sbjct: 295 LQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKG 354
Query: 309 --GPPGPPGPR------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PGPPGPR GP GPPG PGS G + G G G PG+KG +GE+
Sbjct: 355 DEGTPGPPGPRGARGPQGPSGPPGVPGSPG-SSRPGLRGAPGWPGLKGSKGER 406
Score = 111 bits (278), Expect = 1e-24
Identities = 76/208 (36%), Positives = 86/208 (41%), Gaps = 44/208 (21%)
Query: 197 GPAGPPGQTGPPGPAGP--PGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G G P P GP P PG +G+ G+ GE G G PGL G PG GL G G PG PG
Sbjct: 739 GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPG 798
Query: 255 PPGPAGNPGPSPNSPQGA-----LYSLQ-----------------PPTDKDNGDSRLASA 292
PPG G PG P+GA L L+ P D+ S
Sbjct: 799 PPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSP 858
Query: 293 IV-----------DTVLAGVPGPRGPPGP---------PGPPGPRGPPGPPGTPGSQGLA 332
+ G PG GPPG PG GP GPPG PGTPG +G
Sbjct: 859 GIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSP 918
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEGE 360
G G G G PG KGE+G+K E
Sbjct: 919 GIPGVKGQRGTPGAKGEQGDKGNPGPSE 946
Score = 109 bits (272), Expect = 6e-24
Identities = 85/254 (33%), Positives = 100/254 (39%), Gaps = 47/254 (18%)
Query: 151 LEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQ------ 204
L+A P P P PP + P P P P GP G G+
Sbjct: 167 LDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHK 226
Query: 205 --------TGPPGPAGP--------------PGSKGDRGQTGEKGPAGPPGL-------- 234
TGPPGP G G KGD+G GE GP GP GL
Sbjct: 227 GERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSE 286
Query: 235 ---LGPPGPRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDS 287
G PG +G PG+ G PG PG G GN G + +G + PP + G +
Sbjct: 287 KGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFR--GPT 344
Query: 288 RLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQ--GLAGERGTVGPSGEPG 345
+ G PGP GP G GP GP GPPG PG+PGS GL G G G G G
Sbjct: 345 EYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG 404
Query: 346 VKGEEGEKAATAEG 359
+G G+ A G
Sbjct: 405 ERGRPGKDAMGTPG 418
Score = 108 bits (270), Expect = 1e-23
Identities = 80/204 (39%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 197 GPAGPPG----QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL--------GPPGPRGLP 244
GP GPPG + GPPG G PG G G G GP G PGLL GPPG GLP
Sbjct: 433 GPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLP 492
Query: 245 GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV------- 297
G G G PG G AG G SP SP P GD L +T+
Sbjct: 493 GLHGVKGIPGRQGAAGLKG-SPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVG 551
Query: 298 ------LAGVPGPRGPPGPPGPPGPR------------------GPPGPPGTPGSQGLAG 333
L G PG +G G PG PG + GPPG PG+PGS G AG
Sbjct: 552 VPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAG 611
Query: 334 ERGT--VGPSGEPGVKGEEGEKAA 355
G GP GEPG++G +G A
Sbjct: 612 PAGPPGYGPQGEPGLQGTQGVPGA 635
Score = 107 bits (267), Expect = 2e-23
Identities = 81/227 (35%), Positives = 97/227 (42%), Gaps = 58/227 (25%)
Query: 188 PVPRQRR-PTGPAGPPGQTGPPGPAGP-----------PGSKGDRGQTGEK--------- 226
P PR R P GP+GPPG G PG + P GSKG+RG+ G+
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 227 -----------GPAGPPGLL----GPPGPRGLPGEMGRPGPPGPPGPAGNPG-------- 263
GP GPPG + GPPG GLPG +G PG PG GP G PG
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPY 481
Query: 264 -PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG----- 315
P P G L+ ++ + G + L + G+PG G PG G PG
Sbjct: 482 IPGPPGLPGLPGLHGVKGIPGRQ-GAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK 540
Query: 316 -----PRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
P G G PG PG +G G +G G G PGVKG G K A
Sbjct: 541 GETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELA 587
Score = 107 bits (267), Expect = 2e-23
Identities = 78/204 (38%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA---------GPPG 215
P P P T + P IP V QR G G G G PGP+ G PG
Sbjct: 903 PGPPGNPGTPGQRGSP-GIP---GVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPG 958
Query: 216 SKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALY 274
KG G GEKG G PG+ G G +GLPG G PGP G G GNPG P G++
Sbjct: 959 LKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMG 1018
Query: 275 SLQPPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPPG-PPGPR-GPPGPPGTPGSQGL 331
++ P K G L G+ G +G G PG G R GPPGP G PG G
Sbjct: 1019 NMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGD 1078
Query: 332 AGERGTVGPSGEPGVKGEEGEKAA 355
G++G +G G PG G G + A
Sbjct: 1079 MGKKGEMGQPGPPGHLGPAGPEGA 1102
Score = 104 bits (259), Expect = 2e-22
Identities = 65/172 (37%), Positives = 72/172 (41%), Gaps = 22/172 (12%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP------------------P 238
G G PG G G G PG G+ G G+KG GPPG GP P
Sbjct: 303 GVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPP 362
Query: 239 GPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
GPRG G G GPPG PG G+ P G ++
Sbjct: 363 GPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGC 422
Query: 299 AGVPGPRGPPGPPGPPGP----RGPPGPPGTPGSQGLAGERGTVGPSGEPGV 346
AG PG G PGPPGPPG +GPPG G PG G G G GP GEPG+
Sbjct: 423 AGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGL 474
Score = 102 bits (254), Expect = 7e-22
Identities = 72/199 (36%), Positives = 83/199 (41%), Gaps = 37/199 (18%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPR-------QRRPTGPAGPPGQTGPPGPAGPPGSK 217
P P P + D + HP P+ P G G PG G PGP G PG +
Sbjct: 1253 PGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQ 1312
Query: 218 GDRGQTGEKG------PAGPPGLLGPPGPRGLPGEMGR------PGPPGPPGPAGNPG-- 263
G G GEKG GPPG +GP GP G+ G+ G PG PGPPG G PG
Sbjct: 1313 GFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQ 1372
Query: 264 --PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP---RGPPGPPGPPGPRG 318
P P P G L P K D + G PGP +G G G PGP G
Sbjct: 1373 GEPGPPGPPGNLGPCGP-RGKPGKDGK----------PGTPGPAGEKGNKGSKGEPGPAG 1421
Query: 319 PPGPPGTPGSQGLAGERGT 337
G PG G +G +G T
Sbjct: 1422 SDGLPGLKGKRGDSGSPAT 1440
Score = 102 bits (253), Expect = 9e-22
Identities = 59/150 (39%), Positives = 65/150 (43%), Gaps = 43/150 (28%)
Query: 195 PTGPAGPPGQTGPPGPA---------GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P GP GPPG G PG GPPG+ G+ G GE GP GPPG LGP GPRG PG
Sbjct: 1335 PIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPG 1394
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
+ G+PG PGP G GN G G PGP
Sbjct: 1395 KDGKPGTPGPAGEKGNKGSK----------------------------------GEPGPA 1420
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGER 335
G G PG G RG G P T ++G R
Sbjct: 1421 GSDGLPGLKGKRGDSGSPATWTTRGFVFTR 1450
Score = 96.7 bits (239), Expect = 4e-20
Identities = 70/186 (37%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG G PG G PG G +GQ G G G G G PGP + +G G PG
Sbjct: 901 GPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLK 960
Query: 257 GPAGNPGPS-----PNSPQ-GALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G AGNPG P P L L P L S T G PG RG PG
Sbjct: 961 GFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGS----TGNPGEPGLRGIPGS 1016
Query: 311 ------PGPPGPRGP------PGPPGTPGSQGLAGER-----------GTVGPSGEPGVK 347
PG G RG G PG PG GL G++ G GP+G+PG+
Sbjct: 1017 MGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLP 1076
Query: 348 GEEGEK 353
G+ G+K
Sbjct: 1077 GDMGKK 1082
Score = 89.4 bits (220), Expect = 6e-18
Identities = 62/167 (37%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 211 AGPPGSKG----DRGQT---GEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG 263
A P SKG D+GQ G KG G G GPPG G G G G PGP GP G PG
Sbjct: 23 AAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPG 82
Query: 264 -PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGP--- 319
P +G ++G+PG G PG PG PG GP
Sbjct: 83 LPGLTGSKGV-----------------------RGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 320 ---PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQ 363
PG G+ G QG G GT+G G PG G +G+K A A+ E ++
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIE 166
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 142 bits (358), Expect = 6e-34
Identities = 86/200 (43%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 172 PTWNEDF-----LPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS-----KGDRG 221
PT E F LP AI +P Q GP G G G PGP GPPGS KGD+G
Sbjct: 1217 PTGIEGFPGPPGLPGAI-----IPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKG 1271
Query: 222 QTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-------PSPNSPQGALY 274
G GP GPPG G GP PG +G PG PG PGP G+PG G L
Sbjct: 1272 SMGHPGPKGPPGTAGDMGP---PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLG 1328
Query: 275 SLQPPTD-KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAG 333
S+ PP G + + +PG GPPG PG PG +G PGPPG PG+ G G
Sbjct: 1329 SIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCG 1388
Query: 334 ERGTVGPSGEPGVKGEEGEK 353
RG G G+PG G GEK
Sbjct: 1389 PRGKPGKDGKPGTPGPAGEK 1408
Score = 132 bits (333), Expect = 5e-31
Identities = 78/174 (44%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR----P 250
P G G PG GP GPAGPPG G +G+ G +G G PG GPPG G GE+ P
Sbjct: 597 PPGDPGSPGSPGPAGPAGPPGY-GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
GPPGPPGP G+PGP P G SL D G+PGP G PG
Sbjct: 656 GPPGPPGPPGHPGPQ--GPPGIPGSLGKCGDP-----------------GLPGPDGEPGI 696
Query: 311 PG-----PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
PG PPGP+G G PGT GS G G+ G G G+PG+ G +GE A G
Sbjct: 697 PGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPG 750
Score = 127 bits (318), Expect = 3e-29
Identities = 91/232 (39%), Positives = 101/232 (43%), Gaps = 70/232 (30%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---------PGP 240
P P GP G PG G PG G PG GD G G KG GPPG+ GP PGP
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 241 RGLPGEMGRPGPPG-------------PPGPAGNPGP--------SPNSP-----QGALY 274
G+ G+ GR G PG PPGP GNPG +P P +GA+
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMG 1210
Query: 275 SLQP--PTDKDN--GDSRLASAIV--DTVLAGVPGPRGPPGPPGPPGP------------ 316
P PT + G L AI+ T G PG RG PG PGPPGP
Sbjct: 1211 DAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDK 1270
Query: 317 -----RGPPGPPGT------------PGSQGLAGERGTVGPSGEPGVKGEEG 351
GP GPPGT PG+ GL G RG G G PGVKGE+G
Sbjct: 1271 GSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKG 1322
Score = 126 bits (316), Expect = 4e-29
Identities = 81/189 (42%), Positives = 87/189 (46%), Gaps = 38/189 (20%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG----PAGPPGLLGPPGPRGLPGEMGRPGP 252
G G PG TG PG G PG++GD G GEKG P G G+ G PG RG PG G G
Sbjct: 511 GSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGI 570
Query: 253 PGPPGPAGNPGP--------------------SPNSPQGALYSLQPPTDKDNGDSRLASA 292
PG PG G PGP SP SP G PP G+ L
Sbjct: 571 PGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSP-GPAGPAGPPGYGPQGEPGLQGT 629
Query: 293 IVDTVLAGVPG---PRG----------PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
G PG PRG PPGPPGPPG GP GPPG PGS G G+ G G
Sbjct: 630 QGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPG 689
Query: 340 PSGEPGVKG 348
P GEPG+ G
Sbjct: 690 PDGEPGIPG 698
Score = 124 bits (311), Expect = 2e-28
Identities = 73/187 (39%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 197 GPAGPPGQT-----GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
G G PG + GPPGP G PG GD G+ GE G GPPG LGP GP G PG G PG
Sbjct: 1051 GDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPG 1110
Query: 252 PPGPPGPAGNPG----------PSPNSPQG--------ALYSLQPPTDKDNGDSRLASAI 293
PG PGP G+ G P P G ++ +D
Sbjct: 1111 LPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKG 1170
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
+L PGPRG PG G G RG PG PG PG +G G+ G GP+G G G G
Sbjct: 1171 ETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLP 1230
Query: 354 AATAEGE 360
A G+
Sbjct: 1231 GAIIPGQ 1237
Score = 122 bits (306), Expect = 6e-28
Identities = 77/200 (38%), Positives = 96/200 (48%), Gaps = 40/200 (20%)
Query: 192 QRRPTGPAGPPG-----QTGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
+R TGP G PG ++G PG G PG +G+ G G++G G PG+LGPPG G+
Sbjct: 831 RRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGV 890
Query: 244 PGEMGRPGPPGPPGPAGNPG----------PSPNSPQGALYSLQPPTDKDN-GDSRLASA 292
G MG PG GPPGP GNPG P +G + DK N G S ++
Sbjct: 891 IGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHV 950
Query: 293 IVD---------------------TVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGL 331
I D + G+ G +G PGP GPPGPRG G G PG GL
Sbjct: 951 IGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGL 1010
Query: 332 AGERGTVGPSGEPGVKGEEG 351
G G++G G PG KG+ G
Sbjct: 1011 RGIPGSMGNMGMPGSKGKRG 1030
Score = 121 bits (304), Expect = 1e-27
Identities = 81/198 (40%), Positives = 97/198 (48%), Gaps = 42/198 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGPRGLPGE--MGRPGP 252
GP GP G GP GP+GPPG G G + G +G G PGL G G RG PG+ MG PG
Sbjct: 360 GPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGS 419
Query: 253 PG---PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPG 309
PG PG G+PGP P P ++ PP GD L + + GV GP+G PG
Sbjct: 420 PGCAGSPGLPGSPGP-PGPPGDIVFRKGPP-----GDHGLPGYLGSPGIPGVDGPKGEPG 473
Query: 310 P--------PGPPGPRGPPG------------------PPGTPGSQGLAGERGTVGPSGE 343
PGPPG G PG PG+PG+ GL G G G G+
Sbjct: 474 LLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGD 533
Query: 344 PGVKGEEGEKAATAEGEG 361
PG+KGE+GE T + EG
Sbjct: 534 PGLKGEKGE---TLQPEG 548
Score = 120 bits (301), Expect = 2e-27
Identities = 82/177 (46%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 190 PRQRRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P Q+ TGP G PG GP PG G GSKG RG +G G +G PGL G PG G G
Sbjct: 60 PGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 247 MGRPGPPGPPGPAGNPGPS-----PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+G PG G G G PG P P A Q D L A D L G
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIEL-DAKGDPGLPGA 178
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP--GVKGEEGEKAAT 356
PGP+G PGPPG PGP GPPGPPG G G G RG G GE G KGE G K T
Sbjct: 179 PGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLT 235
Score = 117 bits (292), Expect = 3e-26
Identities = 83/218 (38%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 190 PRQRRPTGPAGPPGQ-----------TGPPGPAGPPGSKGDRGQT-------GEKGPAGP 231
P P GPAGPPG G PG GPPG G RG+ G GP GP
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 232 PGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG------PSPNSPQGALYSLQPPTDKDNG 285
PG GP GP G+PG +G+ G PG PGP G PG P P P+G P T G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGF--PGTKGSLG 721
Query: 286 DSRLASAIVDTVLAGVPGPRGPP--------GPPGPPGPRGP---------PGPPGTPGS 328
G+PG +G P G PG PG RG PG PG PG+
Sbjct: 722 CPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGT 781
Query: 329 QGLAGERGTVGPSGEPGVKGEEGEKAATAEG-EGVQQL 365
G G G G G+PG GE+G EG G Q L
Sbjct: 782 PGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Score = 116 bits (290), Expect = 5e-26
Identities = 80/200 (40%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGP------------ 240
P GP GPPG G PG GP G KG G+ G KG G GL GPPGP
Sbjct: 193 PVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPD 252
Query: 241 -----RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYS--LQPPTDKDN-----GDSR 288
+G G+ G G PGPPGP+G PG S S +GA LQ KD G
Sbjct: 253 NRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEG 312
Query: 289 LASAIVDTVLAGVPGPRGPPGPPGPPGPRGPP---------GPPGTPGSQGLAGERGTVG 339
+ L G G +G G GPPG RGP G GTPG G G RG G
Sbjct: 313 VKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQG 372
Query: 340 PSGEPGVKGEEGEKAATAEG 359
PSG PGV G G G
Sbjct: 373 PSGPPGVPGSPGSSRPGLRG 392
Score = 115 bits (287), Expect = 1e-25
Identities = 77/210 (36%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAG--------------------------PPGS 216
+ ++ PVP P GP G PG GPPG G PPG
Sbjct: 648 LSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Query: 217 KGDRGQTGEKGPAGPPGLLGP---PGPRGLPGEMGRP--GPPGPPGPAGNPGPSPNSPQG 271
KGD+G G KG G PG +G PG GLPG G P PG PG G PG NS +
Sbjct: 708 KGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEH 767
Query: 272 ALYSLQ--PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP------- 322
L P G+ G+ GPRG PG PGPPG +GPPG
Sbjct: 768 GEIGLPGLPGLPGTPGNE------------GLDGPRGDPGQPGPPGEQGPPGRCIEGPRG 815
Query: 323 ----PGTPGSQGLAGERGTVGPSGEPGVKG 348
PG G +G G RG GP G+PG+ G
Sbjct: 816 AQGLPGLNGLKGQQGRRGKTGPKGDPGIPG 845
Score = 113 bits (282), Expect = 4e-25
Identities = 81/201 (40%), Positives = 88/201 (43%), Gaps = 40/201 (19%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGP------------------------PGSKGDRGQTG 224
VP G G PG GPPGP G PGSKG RG G
Sbjct: 974 VPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLG 1033
Query: 225 EKGPAGPPGLLGPPGPRGLPGEMGRPG-----PPGPPGPAGNPG-PSPNSPQGALYSLQP 278
G AG PGL PG GL G+ G PG PGPPGP G+PG P +G + P
Sbjct: 1034 FPGRAGRPGL---PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 279 PTD-KDNGDSRLASAIVDTVLAGVPGP------RGPPGPPGPPGPRGPPGPPGTPGSQGL 331
P G + L G PGP +G G GPPG RGPPG PG PGS G
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 332 AGERGTVGPSGEPGVKGEEGE 352
G RG G G PG GE+GE
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGE 1171
Score = 112 bits (281), Expect = 5e-25
Identities = 83/233 (35%), Positives = 98/233 (42%), Gaps = 69/233 (29%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPP---------GSKGDRGQTGE-----KGPAGPPGL 234
+P P G GPPG GP GP GPP G +G +G GE KG G GL
Sbjct: 175 LPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGL 234
Query: 235 LGPPGP-----------------RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGAL--YS 275
GPPGP +G G+ G G PGPPGP+G PG S S +GA
Sbjct: 235 TGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPG 294
Query: 276 LQPPTDKD-----------NGDSRLASAIVDTVLAGVPGPRGPP---------------- 308
LQ KD G+ + + + G G GPP
Sbjct: 295 LQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKG 354
Query: 309 --GPPGPPGPR------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PGPPGPR GP GPPG PGS G + G G G PG+KG +GE+
Sbjct: 355 DEGTPGPPGPRGARGPQGPSGPPGVPGSPG-SSRPGLRGAPGWPGLKGSKGER 406
Score = 111 bits (278), Expect = 1e-24
Identities = 76/208 (36%), Positives = 86/208 (41%), Gaps = 44/208 (21%)
Query: 197 GPAGPPGQTGPPGPAGP--PGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G G P P GP P PG +G+ G+ GE G G PGL G PG GL G G PG PG
Sbjct: 739 GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPG 798
Query: 255 PPGPAGNPGPSPNSPQGA-----LYSLQ-----------------PPTDKDNGDSRLASA 292
PPG G PG P+GA L L+ P D+ S
Sbjct: 799 PPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSP 858
Query: 293 IV-----------DTVLAGVPGPRGPPGP---------PGPPGPRGPPGPPGTPGSQGLA 332
+ G PG GPPG PG GP GPPG PGTPG +G
Sbjct: 859 GIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSP 918
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEGE 360
G G G G PG KGE+G+K E
Sbjct: 919 GIPGVKGQRGTPGAKGEQGDKGNPGPSE 946
Score = 109 bits (272), Expect = 6e-24
Identities = 85/254 (33%), Positives = 100/254 (39%), Gaps = 47/254 (18%)
Query: 151 LEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQ------ 204
L+A P P P PP + P P P P GP G G+
Sbjct: 167 LDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHK 226
Query: 205 --------TGPPGPAGP--------------PGSKGDRGQTGEKGPAGPPGL-------- 234
TGPPGP G G KGD+G GE GP GP GL
Sbjct: 227 GERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSE 286
Query: 235 ---LGPPGPRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDS 287
G PG +G PG+ G PG PG G GN G + +G + PP + G +
Sbjct: 287 KGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFR--GPT 344
Query: 288 RLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQ--GLAGERGTVGPSGEPG 345
+ G PGP GP G GP GP GPPG PG+PGS GL G G G G G
Sbjct: 345 EYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG 404
Query: 346 VKGEEGEKAATAEG 359
+G G+ A G
Sbjct: 405 ERGRPGKDAMGTPG 418
Score = 108 bits (270), Expect = 1e-23
Identities = 80/204 (39%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 197 GPAGPPG----QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL--------GPPGPRGLP 244
GP GPPG + GPPG G PG G G G GP G PGLL GPPG GLP
Sbjct: 433 GPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLP 492
Query: 245 GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV------- 297
G G G PG G AG G SP SP P GD L +T+
Sbjct: 493 GLHGVKGIPGRQGAAGLKG-SPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVG 551
Query: 298 ------LAGVPGPRGPPGPPGPPGPR------------------GPPGPPGTPGSQGLAG 333
L G PG +G G PG PG + GPPG PG+PGS G AG
Sbjct: 552 VPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAG 611
Query: 334 ERGT--VGPSGEPGVKGEEGEKAA 355
G GP GEPG++G +G A
Sbjct: 612 PAGPPGYGPQGEPGLQGTQGVPGA 635
Score = 107 bits (267), Expect = 2e-23
Identities = 81/227 (35%), Positives = 97/227 (42%), Gaps = 58/227 (25%)
Query: 188 PVPRQRR-PTGPAGPPGQTGPPGPAGP-----------PGSKGDRGQTGEK--------- 226
P PR R P GP+GPPG G PG + P GSKG+RG+ G+
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 227 -----------GPAGPPGLL----GPPGPRGLPGEMGRPGPPGPPGPAGNPG-------- 263
GP GPPG + GPPG GLPG +G PG PG GP G PG
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPY 481
Query: 264 -PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG----- 315
P P G L+ ++ + G + L + G+PG G PG G PG
Sbjct: 482 IPGPPGLPGLPGLHGVKGIPGRQ-GAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK 540
Query: 316 -----PRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
P G G PG PG +G G +G G G PGVKG G K A
Sbjct: 541 GETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELA 587
Score = 107 bits (267), Expect = 2e-23
Identities = 78/204 (38%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA---------GPPG 215
P P P T + P IP V QR G G G G PGP+ G PG
Sbjct: 903 PGPPGNPGTPGQRGSP-GIP---GVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPG 958
Query: 216 SKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALY 274
KG G GEKG G PG+ G G +GLPG G PGP G G GNPG P G++
Sbjct: 959 LKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMG 1018
Query: 275 SLQPPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPPG-PPGPR-GPPGPPGTPGSQGL 331
++ P K G L G+ G +G G PG G R GPPGP G PG G
Sbjct: 1019 NMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGD 1078
Query: 332 AGERGTVGPSGEPGVKGEEGEKAA 355
G++G +G G PG G G + A
Sbjct: 1079 MGKKGEMGQPGPPGHLGPAGPEGA 1102
Score = 104 bits (259), Expect = 2e-22
Identities = 65/172 (37%), Positives = 72/172 (41%), Gaps = 22/172 (12%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP------------------P 238
G G PG G G G PG G+ G G+KG GPPG GP P
Sbjct: 303 GVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPP 362
Query: 239 GPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
GPRG G G GPPG PG G+ P G ++
Sbjct: 363 GPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGC 422
Query: 299 AGVPGPRGPPGPPGPPGP----RGPPGPPGTPGSQGLAGERGTVGPSGEPGV 346
AG PG G PGPPGPPG +GPPG G PG G G G GP GEPG+
Sbjct: 423 AGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGL 474
Score = 102 bits (254), Expect = 7e-22
Identities = 72/199 (36%), Positives = 83/199 (41%), Gaps = 37/199 (18%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPR-------QRRPTGPAGPPGQTGPPGPAGPPGSK 217
P P P + D + HP P+ P G G PG G PGP G PG +
Sbjct: 1253 PGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQ 1312
Query: 218 GDRGQTGEKG------PAGPPGLLGPPGPRGLPGEMGR------PGPPGPPGPAGNPG-- 263
G G GEKG GPPG +GP GP G+ G+ G PG PGPPG G PG
Sbjct: 1313 GFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQ 1372
Query: 264 --PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP---RGPPGPPGPPGPRG 318
P P P G L P K D + G PGP +G G G PGP G
Sbjct: 1373 GEPGPPGPPGNLGPCGP-RGKPGKDGK----------PGTPGPAGEKGNKGSKGEPGPAG 1421
Query: 319 PPGPPGTPGSQGLAGERGT 337
G PG G +G +G T
Sbjct: 1422 SDGLPGLKGKRGDSGSPAT 1440
Score = 102 bits (253), Expect = 9e-22
Identities = 59/150 (39%), Positives = 65/150 (43%), Gaps = 43/150 (28%)
Query: 195 PTGPAGPPGQTGPPGPA---------GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P GP GPPG G PG GPPG+ G+ G GE GP GPPG LGP GPRG PG
Sbjct: 1335 PIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPG 1394
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
+ G+PG PGP G GN G G PGP
Sbjct: 1395 KDGKPGTPGPAGEKGNKGSK----------------------------------GEPGPA 1420
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGER 335
G G PG G RG G P T ++G R
Sbjct: 1421 GSDGLPGLKGKRGDSGSPATWTTRGFVFTR 1450
Score = 96.7 bits (239), Expect = 4e-20
Identities = 70/186 (37%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG G PG G PG G +GQ G G G G G PGP + +G G PG
Sbjct: 901 GPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLK 960
Query: 257 GPAGNPGPS-----PNSPQ-GALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G AGNPG P P L L P L S T G PG RG PG
Sbjct: 961 GFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGS----TGNPGEPGLRGIPGS 1016
Query: 311 ------PGPPGPRGP------PGPPGTPGSQGLAGER-----------GTVGPSGEPGVK 347
PG G RG G PG PG GL G++ G GP+G+PG+
Sbjct: 1017 MGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLP 1076
Query: 348 GEEGEK 353
G+ G+K
Sbjct: 1077 GDMGKK 1082
Score = 89.4 bits (220), Expect = 6e-18
Identities = 62/167 (37%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 211 AGPPGSKG----DRGQT---GEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG 263
A P SKG D+GQ G KG G G GPPG G G G G PGP GP G PG
Sbjct: 23 AAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPG 82
Query: 264 -PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGP--- 319
P +G ++G+PG G PG PG PG GP
Sbjct: 83 LPGLTGSKGV-----------------------RGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 320 ---PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQ 363
PG G+ G QG G GT+G G PG G +G+K A A+ E ++
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIE 166
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 142 bits (358), Expect = 6e-34
Identities = 86/200 (43%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 172 PTWNEDF-----LPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGS-----KGDRG 221
PT E F LP AI +P Q GP G G G PGP GPPGS KGD+G
Sbjct: 1217 PTGIEGFPGPPGLPGAI-----IPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKG 1271
Query: 222 QTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-------PSPNSPQGALY 274
G GP GPPG G GP PG +G PG PG PGP G+PG G L
Sbjct: 1272 SMGHPGPKGPPGTAGDMGP---PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLG 1328
Query: 275 SLQPPTD-KDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAG 333
S+ PP G + + +PG GPPG PG PG +G PGPPG PG+ G G
Sbjct: 1329 SIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCG 1388
Query: 334 ERGTVGPSGEPGVKGEEGEK 353
RG G G+PG G GEK
Sbjct: 1389 PRGKPGKDGKPGTPGPAGEK 1408
Score = 132 bits (333), Expect = 5e-31
Identities = 78/174 (44%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR----P 250
P G G PG GP GPAGPPG G +G+ G +G G PG GPPG G GE+ P
Sbjct: 597 PPGDPGSPGSPGPAGPAGPPGY-GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
GPPGPPGP G+PGP P G SL D G+PGP G PG
Sbjct: 656 GPPGPPGPPGHPGPQ--GPPGIPGSLGKCGDP-----------------GLPGPDGEPGI 696
Query: 311 PG-----PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
PG PPGP+G G PGT GS G G+ G G G+PG+ G +GE A G
Sbjct: 697 PGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPG 750
Score = 127 bits (318), Expect = 3e-29
Identities = 91/232 (39%), Positives = 101/232 (43%), Gaps = 70/232 (30%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---------PGP 240
P P GP G PG G PG G PG GD G G KG GPPG+ GP PGP
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 241 RGLPGEMGRPGPPG-------------PPGPAGNPGP--------SPNSP-----QGALY 274
G+ G+ GR G PG PPGP GNPG +P P +GA+
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMG 1210
Query: 275 SLQP--PTDKDN--GDSRLASAIV--DTVLAGVPGPRGPPGPPGPPGP------------ 316
P PT + G L AI+ T G PG RG PG PGPPGP
Sbjct: 1211 DAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDK 1270
Query: 317 -----RGPPGPPGT------------PGSQGLAGERGTVGPSGEPGVKGEEG 351
GP GPPGT PG+ GL G RG G G PGVKGE+G
Sbjct: 1271 GSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKG 1322
Score = 126 bits (316), Expect = 4e-29
Identities = 81/189 (42%), Positives = 87/189 (46%), Gaps = 38/189 (20%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG----PAGPPGLLGPPGPRGLPGEMGRPGP 252
G G PG TG PG G PG++GD G GEKG P G G+ G PG RG PG G G
Sbjct: 511 GSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGI 570
Query: 253 PGPPGPAGNPGP--------------------SPNSPQGALYSLQPPTDKDNGDSRLASA 292
PG PG G PGP SP SP G PP G+ L
Sbjct: 571 PGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSP-GPAGPAGPPGYGPQGEPGLQGT 629
Query: 293 IVDTVLAGVPG---PRG----------PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
G PG PRG PPGPPGPPG GP GPPG PGS G G+ G G
Sbjct: 630 QGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPG 689
Query: 340 PSGEPGVKG 348
P GEPG+ G
Sbjct: 690 PDGEPGIPG 698
Score = 124 bits (311), Expect = 2e-28
Identities = 73/187 (39%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 197 GPAGPPGQT-----GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
G G PG + GPPGP G PG GD G+ GE G GPPG LGP GP G PG G PG
Sbjct: 1051 GDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPG 1110
Query: 252 PPGPPGPAGNPG----------PSPNSPQG--------ALYSLQPPTDKDNGDSRLASAI 293
PG PGP G+ G P P G ++ +D
Sbjct: 1111 LPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKG 1170
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
+L PGPRG PG G G RG PG PG PG +G G+ G GP+G G G G
Sbjct: 1171 ETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLP 1230
Query: 354 AATAEGE 360
A G+
Sbjct: 1231 GAIIPGQ 1237
Score = 122 bits (306), Expect = 6e-28
Identities = 77/200 (38%), Positives = 96/200 (48%), Gaps = 40/200 (20%)
Query: 192 QRRPTGPAGPPG-----QTGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
+R TGP G PG ++G PG G PG +G+ G G++G G PG+LGPPG G+
Sbjct: 831 RRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGV 890
Query: 244 PGEMGRPGPPGPPGPAGNPG----------PSPNSPQGALYSLQPPTDKDN-GDSRLASA 292
G MG PG GPPGP GNPG P +G + DK N G S ++
Sbjct: 891 IGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHV 950
Query: 293 IVD---------------------TVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGL 331
I D + G+ G +G PGP GPPGPRG G G PG GL
Sbjct: 951 IGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGL 1010
Query: 332 AGERGTVGPSGEPGVKGEEG 351
G G++G G PG KG+ G
Sbjct: 1011 RGIPGSMGNMGMPGSKGKRG 1030
Score = 121 bits (304), Expect = 1e-27
Identities = 81/198 (40%), Positives = 97/198 (48%), Gaps = 42/198 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGPRGLPGE--MGRPGP 252
GP GP G GP GP+GPPG G G + G +G G PGL G G RG PG+ MG PG
Sbjct: 360 GPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGS 419
Query: 253 PG---PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPG 309
PG PG G+PGP P P ++ PP GD L + + GV GP+G PG
Sbjct: 420 PGCAGSPGLPGSPGP-PGPPGDIVFRKGPP-----GDHGLPGYLGSPGIPGVDGPKGEPG 473
Query: 310 P--------PGPPGPRGPPG------------------PPGTPGSQGLAGERGTVGPSGE 343
PGPPG G PG PG+PG+ GL G G G G+
Sbjct: 474 LLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGD 533
Query: 344 PGVKGEEGEKAATAEGEG 361
PG+KGE+GE T + EG
Sbjct: 534 PGLKGEKGE---TLQPEG 548
Score = 120 bits (301), Expect = 2e-27
Identities = 82/177 (46%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 190 PRQRRPTGPAGPPGQTGP---PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P Q+ TGP G PG GP PG G GSKG RG +G G +G PGL G PG G G
Sbjct: 60 PGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 247 MGRPGPPGPPGPAGNPGPS-----PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+G PG G G G PG P P A Q D L A D L G
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIEL-DAKGDPGLPGA 178
Query: 302 PGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP--GVKGEEGEKAAT 356
PGP+G PGPPG PGP GPPGPPG G G G RG G GE G KGE G K T
Sbjct: 179 PGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLT 235
Score = 117 bits (292), Expect = 3e-26
Identities = 83/218 (38%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 190 PRQRRPTGPAGPPGQ-----------TGPPGPAGPPGSKGDRGQT-------GEKGPAGP 231
P P GPAGPPG G PG GPPG G RG+ G GP GP
Sbjct: 604 PGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGP 663
Query: 232 PGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG------PSPNSPQGALYSLQPPTDKDNG 285
PG GP GP G+PG +G+ G PG PGP G PG P P P+G P T G
Sbjct: 664 PGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGF--PGTKGSLG 721
Query: 286 DSRLASAIVDTVLAGVPGPRGPP--------GPPGPPGPRGP---------PGPPGTPGS 328
G+PG +G P G PG PG RG PG PG PG+
Sbjct: 722 CPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGT 781
Query: 329 QGLAGERGTVGPSGEPGVKGEEGEKAATAEG-EGVQQL 365
G G G G G+PG GE+G EG G Q L
Sbjct: 782 PGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGL 819
Score = 116 bits (290), Expect = 5e-26
Identities = 80/200 (40%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQT--GEKGPAGPPGLLGPPGP------------ 240
P GP GPPG G PG GP G KG G+ G KG G GL GPPGP
Sbjct: 193 PVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPD 252
Query: 241 -----RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYS--LQPPTDKDN-----GDSR 288
+G G+ G G PGPPGP+G PG S S +GA LQ KD G
Sbjct: 253 NRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEG 312
Query: 289 LASAIVDTVLAGVPGPRGPPGPPGPPGPRGPP---------GPPGTPGSQGLAGERGTVG 339
+ L G G +G G GPPG RGP G GTPG G G RG G
Sbjct: 313 VKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQG 372
Query: 340 PSGEPGVKGEEGEKAATAEG 359
PSG PGV G G G
Sbjct: 373 PSGPPGVPGSPGSSRPGLRG 392
Score = 115 bits (287), Expect = 1e-25
Identities = 77/210 (36%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAG--------------------------PPGS 216
+ ++ PVP P GP G PG GPPG G PPG
Sbjct: 648 LSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Query: 217 KGDRGQTGEKGPAGPPGLLGP---PGPRGLPGEMGRP--GPPGPPGPAGNPGPSPNSPQG 271
KGD+G G KG G PG +G PG GLPG G P PG PG G PG NS +
Sbjct: 708 KGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEH 767
Query: 272 ALYSLQ--PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP------- 322
L P G+ G+ GPRG PG PGPPG +GPPG
Sbjct: 768 GEIGLPGLPGLPGTPGNE------------GLDGPRGDPGQPGPPGEQGPPGRCIEGPRG 815
Query: 323 ----PGTPGSQGLAGERGTVGPSGEPGVKG 348
PG G +G G RG GP G+PG+ G
Sbjct: 816 AQGLPGLNGLKGQQGRRGKTGPKGDPGIPG 845
Score = 113 bits (282), Expect = 4e-25
Identities = 81/201 (40%), Positives = 88/201 (43%), Gaps = 40/201 (19%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGP------------------------PGSKGDRGQTG 224
VP G G PG GPPGP G PGSKG RG G
Sbjct: 974 VPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLG 1033
Query: 225 EKGPAGPPGLLGPPGPRGLPGEMGRPG-----PPGPPGPAGNPG-PSPNSPQGALYSLQP 278
G AG PGL PG GL G+ G PG PGPPGP G+PG P +G + P
Sbjct: 1034 FPGRAGRPGL---PGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 279 PTD-KDNGDSRLASAIVDTVLAGVPGP------RGPPGPPGPPGPRGPPGPPGTPGSQGL 331
P G + L G PGP +G G GPPG RGPPG PG PGS G
Sbjct: 1091 PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGP 1150
Query: 332 AGERGTVGPSGEPGVKGEEGE 352
G RG G G PG GE+GE
Sbjct: 1151 MGIRGDQGRDGIPGPAGEKGE 1171
Score = 112 bits (281), Expect = 5e-25
Identities = 83/233 (35%), Positives = 98/233 (42%), Gaps = 69/233 (29%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPP---------GSKGDRGQTGE-----KGPAGPPGL 234
+P P G GPPG GP GP GPP G +G +G GE KG G GL
Sbjct: 175 LPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGL 234
Query: 235 LGPPGP-----------------RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGAL--YS 275
GPPGP +G G+ G G PGPPGP+G PG S S +GA
Sbjct: 235 TGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPG 294
Query: 276 LQPPTDKD-----------NGDSRLASAIVDTVLAGVPGPRGPP---------------- 308
LQ KD G+ + + + G G GPP
Sbjct: 295 LQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKG 354
Query: 309 --GPPGPPGPR------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PGPPGPR GP GPPG PGS G + G G G PG+KG +GE+
Sbjct: 355 DEGTPGPPGPRGARGPQGPSGPPGVPGSPG-SSRPGLRGAPGWPGLKGSKGER 406
Score = 111 bits (278), Expect = 1e-24
Identities = 76/208 (36%), Positives = 86/208 (41%), Gaps = 44/208 (21%)
Query: 197 GPAGPPGQTGPPGPAGP--PGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G G P P GP P PG +G+ G+ GE G G PGL G PG GL G G PG PG
Sbjct: 739 GAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPG 798
Query: 255 PPGPAGNPGPSPNSPQGA-----LYSLQ-----------------PPTDKDNGDSRLASA 292
PPG G PG P+GA L L+ P D+ S
Sbjct: 799 PPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSP 858
Query: 293 IV-----------DTVLAGVPGPRGPPGP---------PGPPGPRGPPGPPGTPGSQGLA 332
+ G PG GPPG PG GP GPPG PGTPG +G
Sbjct: 859 GIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSP 918
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEGE 360
G G G G PG KGE+G+K E
Sbjct: 919 GIPGVKGQRGTPGAKGEQGDKGNPGPSE 946
Score = 109 bits (272), Expect = 6e-24
Identities = 85/254 (33%), Positives = 100/254 (39%), Gaps = 47/254 (18%)
Query: 151 LEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQ------ 204
L+A P P P PP + P P P P GP G G+
Sbjct: 167 LDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHK 226
Query: 205 --------TGPPGPAGP--------------PGSKGDRGQTGEKGPAGPPGL-------- 234
TGPPGP G G KGD+G GE GP GP GL
Sbjct: 227 GERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSE 286
Query: 235 ---LGPPGPRGLPGEMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDS 287
G PG +G PG+ G PG PG G GN G + +G + PP + G +
Sbjct: 287 KGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFR--GPT 344
Query: 288 RLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQ--GLAGERGTVGPSGEPG 345
+ G PGP GP G GP GP GPPG PG+PGS GL G G G G G
Sbjct: 345 EYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKG 404
Query: 346 VKGEEGEKAATAEG 359
+G G+ A G
Sbjct: 405 ERGRPGKDAMGTPG 418
Score = 108 bits (270), Expect = 1e-23
Identities = 80/204 (39%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 197 GPAGPPG----QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL--------GPPGPRGLP 244
GP GPPG + GPPG G PG G G G GP G PGLL GPPG GLP
Sbjct: 433 GPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLP 492
Query: 245 GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV------- 297
G G G PG G AG G SP SP P GD L +T+
Sbjct: 493 GLHGVKGIPGRQGAAGLKG-SPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETLQPEGQVG 551
Query: 298 ------LAGVPGPRGPPGPPGPPGPR------------------GPPGPPGTPGSQGLAG 333
L G PG +G G PG PG + GPPG PG+PGS G AG
Sbjct: 552 VPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAG 611
Query: 334 ERGT--VGPSGEPGVKGEEGEKAA 355
G GP GEPG++G +G A
Sbjct: 612 PAGPPGYGPQGEPGLQGTQGVPGA 635
Score = 107 bits (267), Expect = 2e-23
Identities = 81/227 (35%), Positives = 97/227 (42%), Gaps = 58/227 (25%)
Query: 188 PVPRQRR-PTGPAGPPGQTGPPGPAGP-----------PGSKGDRGQTGEK--------- 226
P PR R P GP+GPPG G PG + P GSKG+RG+ G+
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 227 -----------GPAGPPGLL----GPPGPRGLPGEMGRPGPPGPPGPAGNPG-------- 263
GP GPPG + GPPG GLPG +G PG PG GP G PG
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPY 481
Query: 264 -PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG----- 315
P P G L+ ++ + G + L + G+PG G PG G PG
Sbjct: 482 IPGPPGLPGLPGLHGVKGIPGRQ-GAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK 540
Query: 316 -----PRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
P G G PG PG +G G +G G G PGVKG G K A
Sbjct: 541 GETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELA 587
Score = 107 bits (267), Expect = 2e-23
Identities = 78/204 (38%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA---------GPPG 215
P P P T + P IP V QR G G G G PGP+ G PG
Sbjct: 903 PGPPGNPGTPGQRGSP-GIP---GVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPG 958
Query: 216 SKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALY 274
KG G GEKG G PG+ G G +GLPG G PGP G G GNPG P G++
Sbjct: 959 LKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMG 1018
Query: 275 SLQPPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPPG-PPGPR-GPPGPPGTPGSQGL 331
++ P K G L G+ G +G G PG G R GPPGP G PG G
Sbjct: 1019 NMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGD 1078
Query: 332 AGERGTVGPSGEPGVKGEEGEKAA 355
G++G +G G PG G G + A
Sbjct: 1079 MGKKGEMGQPGPPGHLGPAGPEGA 1102
Score = 104 bits (259), Expect = 2e-22
Identities = 65/172 (37%), Positives = 72/172 (41%), Gaps = 22/172 (12%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP------------------P 238
G G PG G G G PG G+ G G+KG GPPG GP P
Sbjct: 303 GVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPP 362
Query: 239 GPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
GPRG G G GPPG PG G+ P G ++
Sbjct: 363 GPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGC 422
Query: 299 AGVPGPRGPPGPPGPPGP----RGPPGPPGTPGSQGLAGERGTVGPSGEPGV 346
AG PG G PGPPGPPG +GPPG G PG G G G GP GEPG+
Sbjct: 423 AGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGL 474
Score = 102 bits (254), Expect = 7e-22
Identities = 72/199 (36%), Positives = 83/199 (41%), Gaps = 37/199 (18%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPR-------QRRPTGPAGPPGQTGPPGPAGPPGSK 217
P P P + D + HP P+ P G G PG G PGP G PG +
Sbjct: 1253 PGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQ 1312
Query: 218 GDRGQTGEKG------PAGPPGLLGPPGPRGLPGEMGR------PGPPGPPGPAGNPG-- 263
G G GEKG GPPG +GP GP G+ G+ G PG PGPPG G PG
Sbjct: 1313 GFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQ 1372
Query: 264 --PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP---RGPPGPPGPPGPRG 318
P P P G L P K D + G PGP +G G G PGP G
Sbjct: 1373 GEPGPPGPPGNLGPCGP-RGKPGKDGK----------PGTPGPAGEKGNKGSKGEPGPAG 1421
Query: 319 PPGPPGTPGSQGLAGERGT 337
G PG G +G +G T
Sbjct: 1422 SDGLPGLKGKRGDSGSPAT 1440
Score = 102 bits (253), Expect = 9e-22
Identities = 59/150 (39%), Positives = 65/150 (43%), Gaps = 43/150 (28%)
Query: 195 PTGPAGPPGQTGPPGPA---------GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P GP GPPG G PG GPPG+ G+ G GE GP GPPG LGP GPRG PG
Sbjct: 1335 PIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPG 1394
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
+ G+PG PGP G GN G G PGP
Sbjct: 1395 KDGKPGTPGPAGEKGNKGSK----------------------------------GEPGPA 1420
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGER 335
G G PG G RG G P T ++G R
Sbjct: 1421 GSDGLPGLKGKRGDSGSPATWTTRGFVFTR 1450
Score = 96.7 bits (239), Expect = 4e-20
Identities = 70/186 (37%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG G PG G PG G +GQ G G G G G PGP + +G G PG
Sbjct: 901 GPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLK 960
Query: 257 GPAGNPGPS-----PNSPQ-GALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G AGNPG P P L L P L S T G PG RG PG
Sbjct: 961 GFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGS----TGNPGEPGLRGIPGS 1016
Query: 311 ------PGPPGPRGP------PGPPGTPGSQGLAGER-----------GTVGPSGEPGVK 347
PG G RG G PG PG GL G++ G GP+G+PG+
Sbjct: 1017 MGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLP 1076
Query: 348 GEEGEK 353
G+ G+K
Sbjct: 1077 GDMGKK 1082
Score = 89.4 bits (220), Expect = 6e-18
Identities = 62/167 (37%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 211 AGPPGSKG----DRGQT---GEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG 263
A P SKG D+GQ G KG G G GPPG G G G G PGP GP G PG
Sbjct: 23 AAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPG 82
Query: 264 -PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGP--- 319
P +G ++G+PG G PG PG PG GP
Sbjct: 83 LPGLTGSKGV-----------------------RGISGLPGFSGSPGLPGTPGNTGPYGL 119
Query: 320 ---PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQ 363
PG G+ G QG G GT+G G PG G +G+K A A+ E ++
Sbjct: 120 VGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIE 166
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 140 bits (354), Expect = 2e-33
Identities = 83/190 (43%), Positives = 93/190 (48%), Gaps = 41/190 (21%)
Query: 195 PTGPAGPPG---------QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLG--------- 236
P GP GPPG + GPPG GPPG KG G+ G+ G AG PGL G
Sbjct: 33 PPGPPGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDG 92
Query: 237 PPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDT 296
PPGP+G PGE G GPPGPPG G P P G PP G L +
Sbjct: 93 PPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGV---SGPP-----GGIGLRGPPGPS 144
Query: 297 VLAGVPGPRGPPGPPGPPG---------------PRGPPGPPGTPGSQGLAGERGTVGPS 341
L G+PGP GPPGPPG PG P GPPGPPG PG +G G +G G
Sbjct: 145 GLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPPGPPGPPGMPGFKGPTGYKGEQGEV 204
Query: 342 GEPGVKGEEG 351
G+ G KG+ G
Sbjct: 205 GKDGEKGDPG 214
Score = 136 bits (343), Expect = 3e-32
Identities = 90/220 (40%), Positives = 104/220 (47%), Gaps = 66/220 (30%)
Query: 195 PTGPAGPPGQTGPPGPAGPPG--SKGDRGQTGEKGPAGPPG---LLGPPGPRGLPGEMGR 249
P GP G PG+ G GP GPPG KG G GE G +GPPG L GPPGP GLPG
Sbjct: 93 PPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGLRGPPGPSGLPG---L 149
Query: 250 PGPPGPPGPAGNPG----------------PSPNSPQGALYSLQPPT-----------DK 282
PGPPGPPGP G+PG P P P G + + PT D
Sbjct: 150 PGPPGPPGPPGHPGVLPEGATDLQCPSICPPGPPGPPG-MPGFKGPTGYKGEQGEVGKDG 208
Query: 283 DNGDSRLA--SAIVDTV-------LAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAG 333
+ GD + + +V L G+PGP GPPG GP G RGPPG PG PG G G
Sbjct: 209 EKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRG 268
Query: 334 ER---------------------GTVGPSGEPGVKGEEGE 352
ER G GPSGEPG+ G++G+
Sbjct: 269 ERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEPGMPGKDGQ 308
Score = 135 bits (339), Expect = 1e-31
Identities = 79/184 (42%), Positives = 90/184 (48%), Gaps = 34/184 (18%)
Query: 204 QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG 263
+ G PGP GPPG G GQ G G AGPPGL GPPGP+G PG+ G+PG G PG G G
Sbjct: 27 RVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDG 86
Query: 264 -------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP---RGPPGP--- 310
P P G SL PP G L + ++G PG RGPPGP
Sbjct: 87 LTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGLRGPPGPSGL 146
Query: 311 ---PGPPGPRGPPG------------------PPGTPGSQGLAGERGTVGPSGEPGVKGE 349
PGPPGP GPPG PPG PG G+ G +G G GE G G+
Sbjct: 147 PGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPPGPPGPPGMPGFKGPTGYKGEQGEVGK 206
Query: 350 EGEK 353
+GEK
Sbjct: 207 DGEK 210
Score = 122 bits (305), Expect = 8e-28
Identities = 77/193 (39%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 179 LPDAIPLAHP-----VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPG 233
LP ++ L P +P P G GP G GPPG G PG GDRG+ G +G GP G
Sbjct: 221 LPGSVGLQGPRGLRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKG 280
Query: 234 LLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKD-NGDSRLAS 291
LG PGP+G PG G G PG PG G G P + +G P +K NG L
Sbjct: 281 DLGRPGPKGTPGVAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPG 340
Query: 292 AIV------DTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPG 345
+ AG G GP G PG PG G PG G G +G AG G GP G PG
Sbjct: 341 RAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPG 400
Query: 346 VKGEEGEKAATAE 358
V+G +G+K + +
Sbjct: 401 VRGFQGQKGSMGD 413
Score = 121 bits (304), Expect = 1e-27
Identities = 80/194 (41%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 164 LPAPESTP-PTWNEDFLPD-AIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRG 221
LP P P P + LP+ A L P P GP GPPG G GP G G +G+ G
Sbjct: 149 LPGPPGPPGPPGHPGVLPEGATDLQCP---SICPPGPPGPPGMPGFKGPTGYKGEQGEVG 205
Query: 222 QTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGP----SPNSPQGALYSLQ 277
+ GEKG GPPG G PG GL G G G PGP GP G+ GP P GA
Sbjct: 206 KDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPLGPPGDRGPIGFRGPPGIPGA----- 260
Query: 278 PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGT 337
P D G+ G PGP+G PG GP G G PG G G GL G++G
Sbjct: 261 PGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEPGMPGKDGQNGVPGLDGQKGE 320
Query: 338 VGPSGEPGVKGEEG 351
G +G PG KG G
Sbjct: 321 AGRNGAPGEKGPNG 334
Score = 120 bits (301), Expect = 2e-27
Identities = 71/172 (41%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G G G+ GP G GP G G RG+ G KG GP G G G G PG +G G PG P
Sbjct: 448 GLPGDKGELGPSGLVGPKGESGSRGELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVP 507
Query: 257 GPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV---PGPRGPPGPPG 312
G G PG P + + + L + ++LA+ + + G PGP GPPGPPG
Sbjct: 508 GITGKPGVPGKEASEQRIRELCGGMISEQ-IAQLAAHLRKPLAPGSIGRPGPAGPPGPPG 566
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG-EGVQ 363
PPG G PG G PG +G GE G GP G G +G++G A +G EG Q
Sbjct: 567 PPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGDRGDKGAAGAGLDGPEGDQ 618
Score = 116 bits (290), Expect = 5e-26
Identities = 70/181 (38%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G AGP G+ G PG AG PG +G+ G G G GP G G PG RG G+ G G PG P
Sbjct: 358 GEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLP 417
Query: 257 GP------AGNPGP----SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRG 306
GP G+ GP P QG S P DK + +G+ GP+G
Sbjct: 418 GPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKG-----------ELGPSGLVGPKG 466
Query: 307 PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQQLR 366
G G GP+G GP GT G QG+ G G +G G PGV G G+ + Q++R
Sbjct: 467 ESGSRGELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIR 526
Query: 367 E 367
E
Sbjct: 527 E 527
Score = 114 bits (285), Expect = 2e-25
Identities = 68/157 (43%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G GP G G PG AG G KG+RG+ GE G AGP G G PG G+PGE G G G
Sbjct: 328 GEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSA 387
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
G G GP P +P + Q + D G L G G RG G GP G
Sbjct: 388 GALGPQGP-PGAPGVRGFQGQKGSMGDPG------------LPGPQGLRGDVGDRGPGGA 434
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
GP G G GS GL G++G +GPSG G KGE G +
Sbjct: 435 AGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSR 471
Score = 103 bits (256), Expect = 4e-22
Identities = 73/223 (32%), Positives = 89/223 (39%), Gaps = 60/223 (26%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG--------- 245
P+G GP G++G G GP G++G G +G +G GPPG LG G G+PG
Sbjct: 458 PSGLVGPKGESGSRGELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPG 517
Query: 246 ----------------------------------EMGRPGPPGPPGPAGNPG-------- 263
+GRPGP GPPGP G PG
Sbjct: 518 KEASEQRIRELCGGMISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGAR 577
Query: 264 --PSPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPR--G 318
P P G L P ++ D GD A A +D G G +GP GP G PG G
Sbjct: 578 GPPGYRGPTGELGDPGPRGNQGDRGDKGAAGAGLD----GPEGDQGPQGPQGVPGTSKDG 633
Query: 319 PPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEG 361
G PG PG G G G +G G PG+ + A G G
Sbjct: 634 QDGAPGEPGPPGDPGLPGAIGAQGTPGICDTSACQGAVLGGVG 676
Score = 102 bits (255), Expect = 5e-22
Identities = 66/155 (42%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 193 RRPTGPA--GPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP 250
R+P P G PG GPPGP GPPGS G G G G GP G LG PGPRG G+ G
Sbjct: 545 RKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGDRGDK 604
Query: 251 GPPGP--PGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
G G GP G+ G P PQG P T KD D G PG GPP
Sbjct: 605 GAAGAGLDGPEGDQG--PQGPQGV-----PGTSKDGQD-------------GAPGEPGPP 644
Query: 309 GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE 343
G PG PG G G PG + G +G GE
Sbjct: 645 GDPGLPGAIGAQGTPGICDTSACQG--AVLGGVGE 677
Score = 63.2 bits (152), Expect = 5e-10
Identities = 34/76 (44%), Positives = 37/76 (48%), Gaps = 18/76 (23%)
Query: 298 LAGVPGPRGPPGP---------------PGPPGPRGPPGPPGTPGS---QGLAGERGTVG 339
L G PGP GPPG PGPPGP+G PG PG PG GL G G G
Sbjct: 30 LPGPPGPPGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTG 89
Query: 340 PSGEPGVKGEEGEKAA 355
G PG KG GE+ +
Sbjct: 90 RDGPPGPKGAPGERGS 105
Score = 56.2 bits (134), Expect = 6e-08
Identities = 25/47 (53%), Positives = 27/47 (57%)
Query: 312 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G PGP GPPGPPG PG G+ GE G G G PG KG G+ E
Sbjct: 29 GLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPGKPGKPGE 75
Score = 53.9 bits (128), Expect = 3e-07
Identities = 51/160 (31%), Positives = 59/160 (36%), Gaps = 34/160 (21%)
Query: 117 PGFTGSNCDEECMNCTRLSDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNE 176
PG G E+ + +SE++ L A L P S PA PP
Sbjct: 513 PGVPGKEASEQRIRELCGGMISEQIAQLAAH---LRKPLAPGSIGRPGPAGPPGPPG--- 566
Query: 177 DFLPDAI--PLAHPVPRQRRPTGPAGPPGQTG--------------------PPGPAGPP 214
P +I P A P R PTG G PG G GP GP
Sbjct: 567 --PPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQ 624
Query: 215 GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G G T + G G PG GPPG GLPG +G G PG
Sbjct: 625 GVPG----TSKDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 660
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 140 bits (352), Expect = 3e-33
Identities = 78/171 (45%), Positives = 87/171 (50%), Gaps = 29/171 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GPAG PG+ G G G PG KG +G GE GP GPPGL GP G G+ G G PGP G
Sbjct: 1127 PAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRG 1186
Query: 255 PPGPAGNPG-------PSPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRG 306
G G G P P P G PP +K +NGD GP G
Sbjct: 1187 QQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDV---------------GPMG 1231
Query: 307 PPGPPGPPGPR------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PPGPPGP GP+ GP GPPG+ GS G GE+G G +G PG GE G
Sbjct: 1232 PPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAG 1282
Score = 138 bits (348), Expect = 9e-33
Identities = 74/161 (45%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE---MGRPGP- 252
G G PG+ G PGP G G G +G+ GEKG AGPPG GPPG +G PG+ G PGP
Sbjct: 1264 GEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV 1323
Query: 253 --PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PG PGP G PGP+ G D G+ D G PGP G GP
Sbjct: 1324 GFPGDPGPPGEPGPAGQDGVGG----------DKGEDG------DPGQPGPPGPSGEAGP 1367
Query: 311 PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PGPPG RGPPG G G QG G +G G G PG G G
Sbjct: 1368 PGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVG 1408
Score = 138 bits (348), Expect = 9e-33
Identities = 85/212 (40%), Positives = 102/212 (48%), Gaps = 42/212 (19%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEK---------------GPAGPPGL 234
P Q P GP+G G GPPG GPPG+ G G+ GEK GP GP G
Sbjct: 1353 PGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGP 1412
Query: 235 LGPPGP------------RGLPGEMGRPGPPGPPGPAGNPG--PSPNSP-----QGALYS 275
G PGP +GLPG G+ GPPGP GP G PG P S G +
Sbjct: 1413 AGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGL 1472
Query: 276 LQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGE 334
+ PP ++ + GD L G PG +G G PGP GP GPPGPPG PG QG G
Sbjct: 1473 IGPPGEQGEKGDRGLPGT------QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGN 1526
Query: 335 RGTVGPSGEPGVKGEEGEKAATA-EGEGVQQL 365
+G+ GP+G+ G G G + GE +Q L
Sbjct: 1527 KGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPL 1558
Score = 137 bits (344), Expect = 3e-32
Identities = 74/161 (45%), Positives = 87/161 (54%), Gaps = 22/161 (13%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GP G TG PGP G PGS G +G++G+ GP GP G+ GPPGP G PG+ GRPG G
Sbjct: 541 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 600
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
G G PG + L L P DK + R GP+GPPGPPG G
Sbjct: 601 GMPGEPGAKGDRGFDGLPGL--PGDKGHRGER--------------GPQGPPGPPGDDGM 644
Query: 317 R------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
R GP G PG G +GL G RGT G G+PG+ G +G
Sbjct: 645 RGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDG 685
Score = 137 bits (344), Expect = 3e-32
Identities = 81/188 (43%), Positives = 95/188 (50%), Gaps = 27/188 (14%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGS------KGDRGQT---GEKGPAGPPGLLGPPGP 240
P +R P GP GP G GP GP GPPG G RG+T G+ GP GP G++GP GP
Sbjct: 927 PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 986
Query: 241 RGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G G +G G PGPPGP G G P +GA D G ++ L
Sbjct: 987 TGETGPIGERGHPGPPGPPGEQGLPGAAGKEGA--------KGDPGPQGISGKDGPAGLR 1038
Query: 300 GVPGPRGPPGPPGPP------GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVK---GEE 350
G PG RG PG G P GP+GPPGP G+PG +G AG G +G G PG + G
Sbjct: 1039 GFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPA 1098
Query: 351 GEKAATAE 358
GEK A E
Sbjct: 1099 GEKGAPGE 1106
Score = 136 bits (343), Expect = 3e-32
Identities = 77/170 (45%), Positives = 88/170 (51%), Gaps = 31/170 (18%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP- 250
+R GP GPPG+ G PG AG G+KGD G G G GP GL G PG RGLPG G P
Sbjct: 995 ERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPG 1054
Query: 251 -----GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
GP GPPGP G+PG + G + A I L G PGP+
Sbjct: 1055 LKGGEGPQGPPGPVGSPG-------------------ERGSAGTAGPI---GLPGRPGPQ 1092
Query: 306 GPPGP---PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GPPGP G PG +GP GP G G QG G G GP+G PG G++GE
Sbjct: 1093 GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGE 1142
Score = 134 bits (338), Expect = 1e-31
Identities = 78/180 (43%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG--------- 245
P G G G+ GPPG AGPPG+KG G G KG GP G G PGP G PG
Sbjct: 1286 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGG 1345
Query: 246 ---EMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
E G PG PGPPGP+G G P P GA + +K G A A
Sbjct: 1346 DKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEK--GAKGEAGAEGPPGK 1403
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G GP+GP G PGP G RG PGP G G G AG+ G GP G PG+ G +G+ + E
Sbjct: 1404 TGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGE 1463
Score = 134 bits (336), Expect = 2e-31
Identities = 79/185 (42%), Positives = 95/185 (51%), Gaps = 35/185 (18%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP------AGPPGLLGPPGPRGLPGEMGRP 250
G G G+ GP GP GPPG G RG+ GE GP AGP GLLGP G G PG+ G
Sbjct: 622 GDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMA 681
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G GPPGP GN G PQG PP + N + G+PGP+GP GP
Sbjct: 682 GVDGPPGPKGNMG-----PQG---EPGPPGQQGNPGPQ-----------GLPGPQGPIGP 722
Query: 311 PGPPGPRGPP---------GPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEG 361
PG GP+G P GPPG PG +G +GE+G +GP G G G G + +G
Sbjct: 723 PGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG-ADG 781
Query: 362 VQQLR 366
V+ L+
Sbjct: 782 VRGLK 786
Score = 134 bits (336), Expect = 2e-31
Identities = 87/215 (40%), Positives = 92/215 (42%), Gaps = 51/215 (23%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPP---------GLLGPPGP 240
P +R G AGP G G PGP GPPG G++G GEKGP GP GL GP GP
Sbjct: 1071 PGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGP 1130
Query: 241 RGLPGE------------------MGRPGPPGPP---GPAGNPG-------PSPNSPQGA 272
G PGE G GPPGPP GP G PG P P QG
Sbjct: 1131 AGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGM 1190
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR---------GPPGPPGPPGPRGPPGPP 323
D G L G+PGP GP GPPGPPGPRGP GP
Sbjct: 1191 F-----GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPN 1245
Query: 324 GTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G G QG G G+VG GE G GE G E
Sbjct: 1246 GADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGE 1280
Score = 132 bits (331), Expect = 8e-31
Identities = 76/174 (43%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP---------G 245
P G GPPGQ G PGP G PG +G G GEKGP G PGL G PG G P G
Sbjct: 695 PQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSG 754
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL---AGVP 302
E G GPPGP GP G PGP + L+ + + G+ D L G
Sbjct: 755 EKGALGPPGPQGPIGYPGPRGVKGADGVRGLK-GSKGEKGEDGFPGFKGDMGLKGDRGEV 813
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAAT 356
G GP G GP GP+G GP G PG G AGE+G +G G PG G +G K +T
Sbjct: 814 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGST 867
Score = 131 bits (329), Expect = 1e-30
Identities = 71/156 (45%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G AG PG G GP GP GS+G RG TG+ GP G G GPPGP G G G GP G P
Sbjct: 883 GVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFP 942
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
GP G PGP P G++ GV GP+GP G GP G
Sbjct: 943 GPKGPPGPPGKDG-------LPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGE 995
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
RG PGPPG PG QGL G G G G+PG +G G+
Sbjct: 996 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGK 1031
Score = 128 bits (321), Expect = 1e-29
Identities = 75/182 (41%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---PGPRGLPGEMGRPG 251
P G G G GP GP GPPG +G +G G GP GPPG +G G +G PGE G PG
Sbjct: 1217 PPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG 1276
Query: 252 PP------------------GPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRL 289
PP GPPG AG PG P + P+G + P D G
Sbjct: 1277 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDP--GPPGE 1334
Query: 290 ASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
+ G G G PG PGPPGP G GPPG PG +G G G G GE G KGE
Sbjct: 1335 PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGE 1394
Query: 350 EG 351
G
Sbjct: 1395 AG 1396
Score = 125 bits (314), Expect = 8e-29
Identities = 69/160 (43%), Positives = 82/160 (51%), Gaps = 18/160 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G PG G PG AG G G +G G +G GPPG G PGP+GLPG G GPPG
Sbjct: 667 GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEK 726
Query: 257 GPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
GP G PG P + P G P + +G+ G PGP+GP G PG
Sbjct: 727 GPQGKPGLAGLPGADGPPG-----HPGKEGQSGEKG---------ALGPPGPQGPIGYPG 772
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
P G +G G G GS+G GE G G G+ G+KG+ GE
Sbjct: 773 PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGE 812
Score = 125 bits (314), Expect = 8e-29
Identities = 79/183 (43%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G G GP G AGP G G GQ GEKG G PGL G PG +G G G PG PG
Sbjct: 817 GPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGAN 876
Query: 257 GP------AGNPGP----SPNSPQGALYSLQP-----PTDKDNGDSRLASAIVDTVLAGV 301
G AG PGP P P+G+ + P P GD G
Sbjct: 877 GEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGP----------PGP 926
Query: 302 PGPRGPPGPPGP---PGPRGPPGPP---GTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PG RGP GP GP PGP+GPPGPP G PG G GE G G +G PG G G +
Sbjct: 927 PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 986
Query: 356 TAE 358
T E
Sbjct: 987 TGE 989
Score = 125 bits (314), Expect = 8e-29
Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 27/176 (15%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPP---GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P +R G G PG G GP GPP GS G+RG G GP G PG GP GP G GE
Sbjct: 1041 PGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGE 1100
Query: 247 MGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G PG GP GPAG G P P P G+ P D D G+
Sbjct: 1101 KGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS-----PGEDGDKGE------------I 1143
Query: 300 GVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G PG +G G G GP GPPG G G+ G+AG G GP G+ G+ G++G++ A
Sbjct: 1144 GEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGA 1199
Score = 125 bits (313), Expect = 1e-28
Identities = 81/195 (41%), Positives = 94/195 (48%), Gaps = 39/195 (20%)
Query: 192 QRRPTGPAGPP------GQTGPPGPAGPPGSKGDRGQTGEK---GPAGPPGLLGPPGPRG 242
+R P GP GPP G+ G GP G PG G RG G + G G PG+ G GP G
Sbjct: 629 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG 688
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSP-NSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G MG G PGPPG GNPGP PQG + PP +K LAG+
Sbjct: 689 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQG---PIGPPGEKGPQGK--------PGLAGL 737
Query: 302 PGPRGPPGPP------------GPPGPRGP---PGPPGTPGSQGLAGERGTVGPSGE--- 343
PG GPPG P GPPGP+GP PGP G G+ G+ G +G+ G GE
Sbjct: 738 PGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF 797
Query: 344 PGVKGEEGEKAATAE 358
PG KG+ G K E
Sbjct: 798 PGFKGDMGLKGDRGE 812
Score = 115 bits (289), Expect = 6e-26
Identities = 80/219 (36%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAG--PPGQT--GP 207
E ++P+SP N+ E P E + + H ++ G PG GP
Sbjct: 400 EYEDKPTSPPNE----EFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGP 455
Query: 208 PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP-------GPAG 260
PGPAGP G G G G GP G PG GPPG GLPG G PGPPG G G
Sbjct: 456 PGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDG 515
Query: 261 NPGPSPNSP--------QGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
+ GP+ ++ Q A +L+ P G + + +G G G PGP G
Sbjct: 516 SKGPTISAQEAQAQAILQQARIALRGPPG-PMGLTGRPGPVGGPGSSGAKGESGDPGPQG 574
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
P G +GPPGP G PG +G G G G GEPG KG+ G
Sbjct: 575 PRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 613
Score = 112 bits (281), Expect = 5e-25
Identities = 79/206 (38%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 184 PLAHPVPRQ-------RRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTG------EKGPAG 230
P+ +P PR R G G G+ G PG G G KGDRG+ G E GP G
Sbjct: 767 PIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEG 826
Query: 231 PPGLLGP---PGPRGLPGEMGR---------PGPPGPPGPAGNPG-PSPNSPQGAL-YSL 276
P G GP PGP G GE G+ PG GP G G PG P N +GA +
Sbjct: 827 PKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAG 886
Query: 277 QPPTDKDNGDSRLASAIVDTVLAGVPGPR------GPPGPPGPPGPRGPPGPPGTPGSQG 330
+P G + + G PGP+ GPPGPPG GP+GP GP G PG +G
Sbjct: 887 KPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKG 946
Query: 331 LAGERGTVGPSGEPGVKGEEGEKAAT 356
G G G G PG +GE G + T
Sbjct: 947 PPGPPGKDGLPGHPGQRGETGFQGKT 972
Score = 100 bits (250), Expect = 2e-21
Identities = 73/165 (44%), Positives = 76/165 (46%), Gaps = 43/165 (26%)
Query: 184 PLAHPVPRQRR----PTGPAGPPG---QTGPPGPAGPPGS---KGDRGQTGEKGPAGPPG 233
P P P R P G G PG Q GPPGP GPPG KGD G GEKG G G
Sbjct: 1412 PAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIG 1471
Query: 234 LLGPPGP------RGLPGEMGRPGP------PGPPGPAGNPGP----SPNSPQGALYSLQ 277
L+GPPG RGLPG G PG PGP GP G PGP P P+G S
Sbjct: 1472 LIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTG 1531
Query: 278 PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP 322
P K GDS G+PGP PG PGPPG P P
Sbjct: 1532 PAGQK--GDS------------GLPGP---PGSPGPPGEVIQPLP 1559
Score = 69.3 bits (168), Expect = 6e-12
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 155 ERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPP 214
E+ D LP + +P + +P GPAGP G GPPG GP
Sbjct: 1478 EQGEKGDRGLPGTQGSPGAKGDGGIP----------------GPAGPLGPPGPPGLPGPQ 1521
Query: 215 GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP 252
G KG++G TG G G GL GPPG G PGE+ +P P
Sbjct: 1522 GPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLP 1559
Score = 66.6 bits (161), Expect = 4e-11
Identities = 65/204 (31%), Positives = 71/204 (34%), Gaps = 83/204 (40%)
Query: 194 RPTGPAGPPGQTGPPGPAGPP---GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP 250
+PT P P + GP PA S G GEKG G P ++ P G+ E
Sbjct: 404 KPTSP--PNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEP----GMLVE---- 453
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
GPPGP GPAG GP LQ PT G PG G GP
Sbjct: 454 GPPGPAGPAGIMGPP---------GLQGPT-------------------GPPGDPGDRGP 485
Query: 311 PGP---PGPRGPPGPPGT---------------------------------------PGS 328
PG PG G PGPPGT PG
Sbjct: 486 PGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGP 545
Query: 329 QGLAGERGTVGPSGEPGVKGEEGE 352
GL G G VG G G KGE G+
Sbjct: 546 MGLTGRPGPVGGPGSSGAKGESGD 569
Score = 66.6 bits (161), Expect = 4e-11
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
+P P + G GP G GPPGP G PG +G +G G GPAG G G PGP
Sbjct: 1487 LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGP-- 1544
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDN 284
PG PGPPG P P +S + ++ D D+
Sbjct: 1545 -------PGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADD 1579
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 140 bits (352), Expect = 3e-33
Identities = 78/171 (45%), Positives = 87/171 (50%), Gaps = 29/171 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GPAG PG+ G G G PG KG +G GE GP GPPGL GP G G+ G G PGP G
Sbjct: 1076 PAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRG 1135
Query: 255 PPGPAGNPG-------PSPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRG 306
G G G P P P G PP +K +NGD GP G
Sbjct: 1136 QQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDV---------------GPMG 1180
Query: 307 PPGPPGPPGPR------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PPGPPGP GP+ GP GPPG+ GS G GE+G G +G PG GE G
Sbjct: 1181 PPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAG 1231
Score = 138 bits (348), Expect = 9e-33
Identities = 74/161 (45%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE---MGRPGP- 252
G G PG+ G PGP G G G +G+ GEKG AGPPG GPPG +G PG+ G PGP
Sbjct: 1213 GEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV 1272
Query: 253 --PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PG PGP G PGP+ G D G+ D G PGP G GP
Sbjct: 1273 GFPGDPGPPGEPGPAGQDGVGG----------DKGEDG------DPGQPGPPGPSGEAGP 1316
Query: 311 PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PGPPG RGPPG G G QG G +G G G PG G G
Sbjct: 1317 PGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVG 1357
Score = 138 bits (348), Expect = 9e-33
Identities = 85/212 (40%), Positives = 102/212 (48%), Gaps = 42/212 (19%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEK---------------GPAGPPGL 234
P Q P GP+G G GPPG GPPG+ G G+ GEK GP GP G
Sbjct: 1302 PGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGP 1361
Query: 235 LGPPGP------------RGLPGEMGRPGPPGPPGPAGNPG--PSPNSP-----QGALYS 275
G PGP +GLPG G+ GPPGP GP G PG P S G +
Sbjct: 1362 AGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGL 1421
Query: 276 LQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGE 334
+ PP ++ + GD L G PG +G G PGP GP GPPGPPG PG QG G
Sbjct: 1422 IGPPGEQGEKGDRGLPGT------QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGN 1475
Query: 335 RGTVGPSGEPGVKGEEGEKAATA-EGEGVQQL 365
+G+ GP+G+ G G G + GE +Q L
Sbjct: 1476 KGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPL 1507
Score = 137 bits (344), Expect = 3e-32
Identities = 74/161 (45%), Positives = 87/161 (54%), Gaps = 22/161 (13%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GP G TG PGP G PGS G +G++G+ GP GP G+ GPPGP G PG+ GRPG G
Sbjct: 490 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 549
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
G G PG + L L P DK + R GP+GPPGPPG G
Sbjct: 550 GMPGEPGAKGDRGFDGLPGL--PGDKGHRGER--------------GPQGPPGPPGDDGM 593
Query: 317 R------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
R GP G PG G +GL G RGT G G+PG+ G +G
Sbjct: 594 RGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDG 634
Score = 137 bits (344), Expect = 3e-32
Identities = 81/188 (43%), Positives = 95/188 (50%), Gaps = 27/188 (14%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGS------KGDRGQT---GEKGPAGPPGLLGPPGP 240
P +R P GP GP G GP GP GPPG G RG+T G+ GP GP G++GP GP
Sbjct: 876 PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 935
Query: 241 RGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G G +G G PGPPGP G G P +GA D G ++ L
Sbjct: 936 TGETGPIGERGHPGPPGPPGEQGLPGAAGKEGA--------KGDPGPQGISGKDGPAGLR 987
Query: 300 GVPGPRGPPGPPGPP------GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVK---GEE 350
G PG RG PG G P GP+GPPGP G+PG +G AG G +G G PG + G
Sbjct: 988 GFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPA 1047
Query: 351 GEKAATAE 358
GEK A E
Sbjct: 1048 GEKGAPGE 1055
Score = 136 bits (343), Expect = 3e-32
Identities = 77/170 (45%), Positives = 88/170 (51%), Gaps = 31/170 (18%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP- 250
+R GP GPPG+ G PG AG G+KGD G G G GP GL G PG RGLPG G P
Sbjct: 944 ERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPG 1003
Query: 251 -----GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
GP GPPGP G+PG + G + A I L G PGP+
Sbjct: 1004 LKGGEGPQGPPGPVGSPG-------------------ERGSAGTAGPI---GLPGRPGPQ 1041
Query: 306 GPPGP---PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GPPGP G PG +GP GP G G QG G G GP+G PG G++GE
Sbjct: 1042 GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGE 1091
Score = 134 bits (338), Expect = 1e-31
Identities = 78/180 (43%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG--------- 245
P G G G+ GPPG AGPPG+KG G G KG GP G G PGP G PG
Sbjct: 1235 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGG 1294
Query: 246 ---EMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
E G PG PGPPGP+G G P P GA + +K G A A
Sbjct: 1295 DKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEK--GAKGEAGAEGPPGK 1352
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G GP+GP G PGP G RG PGP G G G AG+ G GP G PG+ G +G+ + E
Sbjct: 1353 TGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGE 1412
Score = 134 bits (336), Expect = 2e-31
Identities = 79/185 (42%), Positives = 95/185 (51%), Gaps = 35/185 (18%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP------AGPPGLLGPPGPRGLPGEMGRP 250
G G G+ GP GP GPPG G RG+ GE GP AGP GLLGP G G PG+ G
Sbjct: 571 GDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMA 630
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G GPPGP GN G PQG PP + N + G+PGP+GP GP
Sbjct: 631 GVDGPPGPKGNMG-----PQG---EPGPPGQQGNPGPQ-----------GLPGPQGPIGP 671
Query: 311 PGPPGPRGPP---------GPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEG 361
PG GP+G P GPPG PG +G +GE+G +GP G G G G + +G
Sbjct: 672 PGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG-ADG 730
Query: 362 VQQLR 366
V+ L+
Sbjct: 731 VRGLK 735
Score = 134 bits (336), Expect = 2e-31
Identities = 87/215 (40%), Positives = 92/215 (42%), Gaps = 51/215 (23%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPP---------GLLGPPGP 240
P +R G AGP G G PGP GPPG G++G GEKGP GP GL GP GP
Sbjct: 1020 PGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGP 1079
Query: 241 RGLPGE------------------MGRPGPPGPP---GPAGNPG-------PSPNSPQGA 272
G PGE G GPPGPP GP G PG P P QG
Sbjct: 1080 AGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGM 1139
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR---------GPPGPPGPPGPRGPPGPP 323
D G L G+PGP GP GPPGPPGPRGP GP
Sbjct: 1140 F-----GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPN 1194
Query: 324 GTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G G QG G G+VG GE G GE G E
Sbjct: 1195 GADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGE 1229
Score = 132 bits (331), Expect = 8e-31
Identities = 76/174 (43%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP---------G 245
P G GPPGQ G PGP G PG +G G GEKGP G PGL G PG G P G
Sbjct: 644 PQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSG 703
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL---AGVP 302
E G GPPGP GP G PGP + L+ + + G+ D L G
Sbjct: 704 EKGALGPPGPQGPIGYPGPRGVKGADGVRGLK-GSKGEKGEDGFPGFKGDMGLKGDRGEV 762
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAAT 356
G GP G GP GP+G GP G PG G AGE+G +G G PG G +G K +T
Sbjct: 763 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGST 816
Score = 131 bits (329), Expect = 1e-30
Identities = 71/156 (45%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G AG PG G GP GP GS+G RG TG+ GP G G GPPGP G G G GP G P
Sbjct: 832 GVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFP 891
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
GP G PGP P G++ GV GP+GP G GP G
Sbjct: 892 GPKGPPGPPGKDG-------LPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGE 944
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
RG PGPPG PG QGL G G G G+PG +G G+
Sbjct: 945 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGK 980
Score = 128 bits (321), Expect = 1e-29
Identities = 75/182 (41%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---PGPRGLPGEMGRPG 251
P G G G GP GP GPPG +G +G G GP GPPG +G G +G PGE G PG
Sbjct: 1166 PPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG 1225
Query: 252 PP------------------GPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRL 289
PP GPPG AG PG P + P+G + P D G
Sbjct: 1226 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDP--GPPGE 1283
Query: 290 ASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
+ G G G PG PGPPGP G GPPG PG +G G G G GE G KGE
Sbjct: 1284 PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGE 1343
Query: 350 EG 351
G
Sbjct: 1344 AG 1345
Score = 125 bits (314), Expect = 8e-29
Identities = 69/160 (43%), Positives = 82/160 (51%), Gaps = 18/160 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G PG G PG AG G G +G G +G GPPG G PGP+GLPG G GPPG
Sbjct: 616 GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEK 675
Query: 257 GPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
GP G PG P + P G P + +G+ G PGP+GP G PG
Sbjct: 676 GPQGKPGLAGLPGADGPPG-----HPGKEGQSGEKG---------ALGPPGPQGPIGYPG 721
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
P G +G G G GS+G GE G G G+ G+KG+ GE
Sbjct: 722 PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGE 761
Score = 125 bits (314), Expect = 8e-29
Identities = 79/183 (43%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G G GP G AGP G G GQ GEKG G PGL G PG +G G G PG PG
Sbjct: 766 GPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGAN 825
Query: 257 GP------AGNPGP----SPNSPQGALYSLQP-----PTDKDNGDSRLASAIVDTVLAGV 301
G AG PGP P P+G+ + P P GD G
Sbjct: 826 GEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGP----------PGP 875
Query: 302 PGPRGPPGPPGP---PGPRGPPGPP---GTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PG RGP GP GP PGP+GPPGPP G PG G GE G G +G PG G G +
Sbjct: 876 PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 935
Query: 356 TAE 358
T E
Sbjct: 936 TGE 938
Score = 125 bits (314), Expect = 8e-29
Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 27/176 (15%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPP---GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P +R G G PG G GP GPP GS G+RG G GP G PG GP GP G GE
Sbjct: 990 PGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGE 1049
Query: 247 MGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G PG GP GPAG G P P P G+ P D D G+
Sbjct: 1050 KGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS-----PGEDGDKGE------------I 1092
Query: 300 GVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G PG +G G G GP GPPG G G+ G+AG G GP G+ G+ G++G++ A
Sbjct: 1093 GEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGA 1148
Score = 125 bits (313), Expect = 1e-28
Identities = 81/195 (41%), Positives = 94/195 (48%), Gaps = 39/195 (20%)
Query: 192 QRRPTGPAGPP------GQTGPPGPAGPPGSKGDRGQTGEK---GPAGPPGLLGPPGPRG 242
+R P GP GPP G+ G GP G PG G RG G + G G PG+ G GP G
Sbjct: 578 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG 637
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSP-NSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G MG G PGPPG GNPGP PQG + PP +K LAG+
Sbjct: 638 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQG---PIGPPGEKGPQGK--------PGLAGL 686
Query: 302 PGPRGPPGPP------------GPPGPRGP---PGPPGTPGSQGLAGERGTVGPSGE--- 343
PG GPPG P GPPGP+GP PGP G G+ G+ G +G+ G GE
Sbjct: 687 PGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF 746
Query: 344 PGVKGEEGEKAATAE 358
PG KG+ G K E
Sbjct: 747 PGFKGDMGLKGDRGE 761
Score = 115 bits (289), Expect = 6e-26
Identities = 80/219 (36%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAG--PPGQT--GP 207
E ++P+SP N+ E P E + + H ++ G PG GP
Sbjct: 349 EYEDKPTSPPNE----EFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGP 404
Query: 208 PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP-------GPAG 260
PGPAGP G G G G GP G PG GPPG GLPG G PGPPG G G
Sbjct: 405 PGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDG 464
Query: 261 NPGPSPNSP--------QGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
+ GP+ ++ Q A +L+ P G + + +G G G PGP G
Sbjct: 465 SKGPTISAQEAQAQAILQQARIALRGPPG-PMGLTGRPGPVGGPGSSGAKGESGDPGPQG 523
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
P G +GPPGP G PG +G G G G GEPG KG+ G
Sbjct: 524 PRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 562
Score = 112 bits (281), Expect = 5e-25
Identities = 79/206 (38%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 184 PLAHPVPRQ-------RRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTG------EKGPAG 230
P+ +P PR R G G G+ G PG G G KGDRG+ G E GP G
Sbjct: 716 PIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEG 775
Query: 231 PPGLLGP---PGPRGLPGEMGR---------PGPPGPPGPAGNPG-PSPNSPQGAL-YSL 276
P G GP PGP G GE G+ PG GP G G PG P N +GA +
Sbjct: 776 PKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAG 835
Query: 277 QPPTDKDNGDSRLASAIVDTVLAGVPGPR------GPPGPPGPPGPRGPPGPPGTPGSQG 330
+P G + + G PGP+ GPPGPPG GP+GP GP G PG +G
Sbjct: 836 KPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKG 895
Query: 331 LAGERGTVGPSGEPGVKGEEGEKAAT 356
G G G G PG +GE G + T
Sbjct: 896 PPGPPGKDGLPGHPGQRGETGFQGKT 921
Score = 100 bits (250), Expect = 2e-21
Identities = 73/165 (44%), Positives = 76/165 (46%), Gaps = 43/165 (26%)
Query: 184 PLAHPVPRQRR----PTGPAGPPG---QTGPPGPAGPPGS---KGDRGQTGEKGPAGPPG 233
P P P R P G G PG Q GPPGP GPPG KGD G GEKG G G
Sbjct: 1361 PAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIG 1420
Query: 234 LLGPPGP------RGLPGEMGRPGP------PGPPGPAGNPGP----SPNSPQGALYSLQ 277
L+GPPG RGLPG G PG PGP GP G PGP P P+G S
Sbjct: 1421 LIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTG 1480
Query: 278 PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP 322
P K GDS G+PGP PG PGPPG P P
Sbjct: 1481 PAGQK--GDS------------GLPGP---PGSPGPPGEVIQPLP 1508
Score = 69.3 bits (168), Expect = 6e-12
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 155 ERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPP 214
E+ D LP + +P + +P GPAGP G GPPG GP
Sbjct: 1427 EQGEKGDRGLPGTQGSPGAKGDGGIP----------------GPAGPLGPPGPPGLPGPQ 1470
Query: 215 GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP 252
G KG++G TG G G GL GPPG G PGE+ +P P
Sbjct: 1471 GPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLP 1508
Score = 66.6 bits (161), Expect = 4e-11
Identities = 65/204 (31%), Positives = 71/204 (34%), Gaps = 83/204 (40%)
Query: 194 RPTGPAGPPGQTGPPGPAGPP---GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP 250
+PT P P + GP PA S G GEKG G P ++ P G+ E
Sbjct: 353 KPTSP--PNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEP----GMLVE---- 402
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
GPPGP GPAG GP LQ PT G PG G GP
Sbjct: 403 GPPGPAGPAGIMGPP---------GLQGPT-------------------GPPGDPGDRGP 434
Query: 311 PGP---PGPRGPPGPPGT---------------------------------------PGS 328
PG PG G PGPPGT PG
Sbjct: 435 PGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGP 494
Query: 329 QGLAGERGTVGPSGEPGVKGEEGE 352
GL G G VG G G KGE G+
Sbjct: 495 MGLTGRPGPVGGPGSSGAKGESGD 518
Score = 66.6 bits (161), Expect = 4e-11
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
+P P + G GP G GPPGP G PG +G +G G GPAG G G PGP
Sbjct: 1436 LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGP-- 1493
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDN 284
PG PGPPG P P +S + ++ D D+
Sbjct: 1494 -------PGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADD 1528
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 140 bits (352), Expect = 3e-33
Identities = 78/171 (45%), Positives = 87/171 (50%), Gaps = 29/171 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GPAG PG+ G G G PG KG +G GE GP GPPGL GP G G+ G G PGP G
Sbjct: 1115 PAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRG 1174
Query: 255 PPGPAGNPG-------PSPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRG 306
G G G P P P G PP +K +NGD GP G
Sbjct: 1175 QQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDV---------------GPMG 1219
Query: 307 PPGPPGPPGPR------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PPGPPGP GP+ GP GPPG+ GS G GE+G G +G PG GE G
Sbjct: 1220 PPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAG 1270
Score = 138 bits (348), Expect = 9e-33
Identities = 74/161 (45%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE---MGRPGP- 252
G G PG+ G PGP G G G +G+ GEKG AGPPG GPPG +G PG+ G PGP
Sbjct: 1252 GEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV 1311
Query: 253 --PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PG PGP G PGP+ G D G+ D G PGP G GP
Sbjct: 1312 GFPGDPGPPGEPGPAGQDGVGG----------DKGEDG------DPGQPGPPGPSGEAGP 1355
Query: 311 PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
PGPPG RGPPG G G QG G +G G G PG G G
Sbjct: 1356 PGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVG 1396
Score = 138 bits (348), Expect = 9e-33
Identities = 85/212 (40%), Positives = 102/212 (48%), Gaps = 42/212 (19%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEK---------------GPAGPPGL 234
P Q P GP+G G GPPG GPPG+ G G+ GEK GP GP G
Sbjct: 1341 PGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGP 1400
Query: 235 LGPPGP------------RGLPGEMGRPGPPGPPGPAGNPG--PSPNSP-----QGALYS 275
G PGP +GLPG G+ GPPGP GP G PG P S G +
Sbjct: 1401 AGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGL 1460
Query: 276 LQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGE 334
+ PP ++ + GD L G PG +G G PGP GP GPPGPPG PG QG G
Sbjct: 1461 IGPPGEQGEKGDRGLPGT------QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGN 1514
Query: 335 RGTVGPSGEPGVKGEEGEKAATA-EGEGVQQL 365
+G+ GP+G+ G G G + GE +Q L
Sbjct: 1515 KGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPL 1546
Score = 137 bits (344), Expect = 3e-32
Identities = 74/161 (45%), Positives = 87/161 (54%), Gaps = 22/161 (13%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GP G TG PGP G PGS G +G++G+ GP GP G+ GPPGP G PG+ GRPG G
Sbjct: 529 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 588
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
G G PG + L L P DK + R GP+GPPGPPG G
Sbjct: 589 GMPGEPGAKGDRGFDGLPGL--PGDKGHRGER--------------GPQGPPGPPGDDGM 632
Query: 317 R------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
R GP G PG G +GL G RGT G G+PG+ G +G
Sbjct: 633 RGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDG 673
Score = 137 bits (344), Expect = 3e-32
Identities = 81/188 (43%), Positives = 95/188 (50%), Gaps = 27/188 (14%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGS------KGDRGQT---GEKGPAGPPGLLGPPGP 240
P +R P GP GP G GP GP GPPG G RG+T G+ GP GP G++GP GP
Sbjct: 915 PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 974
Query: 241 RGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G G +G G PGPPGP G G P +GA D G ++ L
Sbjct: 975 TGETGPIGERGHPGPPGPPGEQGLPGAAGKEGA--------KGDPGPQGISGKDGPAGLR 1026
Query: 300 GVPGPRGPPGPPGPP------GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVK---GEE 350
G PG RG PG G P GP+GPPGP G+PG +G AG G +G G PG + G
Sbjct: 1027 GFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPA 1086
Query: 351 GEKAATAE 358
GEK A E
Sbjct: 1087 GEKGAPGE 1094
Score = 136 bits (343), Expect = 3e-32
Identities = 77/170 (45%), Positives = 88/170 (51%), Gaps = 31/170 (18%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP- 250
+R GP GPPG+ G PG AG G+KGD G G G GP GL G PG RGLPG G P
Sbjct: 983 ERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPG 1042
Query: 251 -----GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
GP GPPGP G+PG + G + A I L G PGP+
Sbjct: 1043 LKGGEGPQGPPGPVGSPG-------------------ERGSAGTAGPI---GLPGRPGPQ 1080
Query: 306 GPPGP---PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GPPGP G PG +GP GP G G QG G G GP+G PG G++GE
Sbjct: 1081 GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGE 1130
Score = 134 bits (338), Expect = 1e-31
Identities = 78/180 (43%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG--------- 245
P G G G+ GPPG AGPPG+KG G G KG GP G G PGP G PG
Sbjct: 1274 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGG 1333
Query: 246 ---EMGRPGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
E G PG PGPPGP+G G P P GA + +K G A A
Sbjct: 1334 DKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEK--GAKGEAGAEGPPGK 1391
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G GP+GP G PGP G RG PGP G G G AG+ G GP G PG+ G +G+ + E
Sbjct: 1392 TGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGE 1451
Score = 134 bits (336), Expect = 2e-31
Identities = 79/185 (42%), Positives = 95/185 (51%), Gaps = 35/185 (18%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP------AGPPGLLGPPGPRGLPGEMGRP 250
G G G+ GP GP GPPG G RG+ GE GP AGP GLLGP G G PG+ G
Sbjct: 610 GDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMA 669
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G GPPGP GN G PQG PP + N + G+PGP+GP GP
Sbjct: 670 GVDGPPGPKGNMG-----PQG---EPGPPGQQGNPGPQ-----------GLPGPQGPIGP 710
Query: 311 PGPPGPRGPP---------GPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEG 361
PG GP+G P GPPG PG +G +GE+G +GP G G G G + +G
Sbjct: 711 PGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG-ADG 769
Query: 362 VQQLR 366
V+ L+
Sbjct: 770 VRGLK 774
Score = 134 bits (336), Expect = 2e-31
Identities = 87/215 (40%), Positives = 92/215 (42%), Gaps = 51/215 (23%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPP---------GLLGPPGP 240
P +R G AGP G G PGP GPPG G++G GEKGP GP GL GP GP
Sbjct: 1059 PGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGP 1118
Query: 241 RGLPGE------------------MGRPGPPGPP---GPAGNPG-------PSPNSPQGA 272
G PGE G GPPGPP GP G PG P P QG
Sbjct: 1119 AGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGM 1178
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR---------GPPGPPGPPGPRGPPGPP 323
D G L G+PGP GP GPPGPPGPRGP GP
Sbjct: 1179 F-----GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPN 1233
Query: 324 GTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G G QG G G+VG GE G GE G E
Sbjct: 1234 GADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGE 1268
Score = 132 bits (331), Expect = 8e-31
Identities = 76/174 (43%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP---------G 245
P G GPPGQ G PGP G PG +G G GEKGP G PGL G PG G P G
Sbjct: 683 PQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSG 742
Query: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL---AGVP 302
E G GPPGP GP G PGP + L+ + + G+ D L G
Sbjct: 743 EKGALGPPGPQGPIGYPGPRGVKGADGVRGLK-GSKGEKGEDGFPGFKGDMGLKGDRGEV 801
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAAT 356
G GP G GP GP+G GP G PG G AGE+G +G G PG G +G K +T
Sbjct: 802 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGST 855
Score = 131 bits (329), Expect = 1e-30
Identities = 71/156 (45%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G AG PG G GP GP GS+G RG TG+ GP G G GPPGP G G G GP G P
Sbjct: 871 GVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFP 930
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
GP G PGP P G++ GV GP+GP G GP G
Sbjct: 931 GPKGPPGPPGKDG-------LPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGE 983
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
RG PGPPG PG QGL G G G G+PG +G G+
Sbjct: 984 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGK 1019
Score = 128 bits (321), Expect = 1e-29
Identities = 75/182 (41%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP---PGPRGLPGEMGRPG 251
P G G G GP GP GPPG +G +G G GP GPPG +G G +G PGE G PG
Sbjct: 1205 PPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG 1264
Query: 252 PP------------------GPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRL 289
PP GPPG AG PG P + P+G + P D G
Sbjct: 1265 PPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDP--GPPGE 1322
Query: 290 ASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
+ G G G PG PGPPGP G GPPG PG +G G G G GE G KGE
Sbjct: 1323 PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGE 1382
Query: 350 EG 351
G
Sbjct: 1383 AG 1384
Score = 125 bits (314), Expect = 8e-29
Identities = 69/160 (43%), Positives = 82/160 (51%), Gaps = 18/160 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G PG G PG AG G G +G G +G GPPG G PGP+GLPG G GPPG
Sbjct: 655 GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEK 714
Query: 257 GPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
GP G PG P + P G P + +G+ G PGP+GP G PG
Sbjct: 715 GPQGKPGLAGLPGADGPPG-----HPGKEGQSGEKG---------ALGPPGPQGPIGYPG 760
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
P G +G G G GS+G GE G G G+ G+KG+ GE
Sbjct: 761 PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGE 800
Score = 125 bits (314), Expect = 8e-29
Identities = 79/183 (43%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G G GP G AGP G G GQ GEKG G PGL G PG +G G G PG PG
Sbjct: 805 GPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGAN 864
Query: 257 GP------AGNPGP----SPNSPQGALYSLQP-----PTDKDNGDSRLASAIVDTVLAGV 301
G AG PGP P P+G+ + P P GD G
Sbjct: 865 GEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGP----------PGP 914
Query: 302 PGPRGPPGPPGP---PGPRGPPGPP---GTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
PG RGP GP GP PGP+GPPGPP G PG G GE G G +G PG G G +
Sbjct: 915 PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 974
Query: 356 TAE 358
T E
Sbjct: 975 TGE 977
Score = 125 bits (314), Expect = 8e-29
Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 27/176 (15%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPP---GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P +R G G PG G GP GPP GS G+RG G GP G PG GP GP G GE
Sbjct: 1029 PGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGE 1088
Query: 247 MGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G PG GP GPAG G P P P G+ P D D G+
Sbjct: 1089 KGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS-----PGEDGDKGE------------I 1131
Query: 300 GVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G PG +G G G GP GPPG G G+ G+AG G GP G+ G+ G++G++ A
Sbjct: 1132 GEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGA 1187
Score = 125 bits (313), Expect = 1e-28
Identities = 81/195 (41%), Positives = 94/195 (48%), Gaps = 39/195 (20%)
Query: 192 QRRPTGPAGPP------GQTGPPGPAGPPGSKGDRGQTGEK---GPAGPPGLLGPPGPRG 242
+R P GP GPP G+ G GP G PG G RG G + G G PG+ G GP G
Sbjct: 617 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG 676
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSP-NSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
G MG G PGPPG GNPGP PQG + PP +K LAG+
Sbjct: 677 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQG---PIGPPGEKGPQGK--------PGLAGL 725
Query: 302 PGPRGPPGPP------------GPPGPRGP---PGPPGTPGSQGLAGERGTVGPSGE--- 343
PG GPPG P GPPGP+GP PGP G G+ G+ G +G+ G GE
Sbjct: 726 PGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF 785
Query: 344 PGVKGEEGEKAATAE 358
PG KG+ G K E
Sbjct: 786 PGFKGDMGLKGDRGE 800
Score = 115 bits (289), Expect = 6e-26
Identities = 80/219 (36%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAG--PPGQT--GP 207
E ++P+SP N+ E P E + + H ++ G PG GP
Sbjct: 388 EYEDKPTSPPNE----EFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGP 443
Query: 208 PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP-------GPAG 260
PGPAGP G G G G GP G PG GPPG GLPG G PGPPG G G
Sbjct: 444 PGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDG 503
Query: 261 NPGPSPNSP--------QGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
+ GP+ ++ Q A +L+ P G + + +G G G PGP G
Sbjct: 504 SKGPTISAQEAQAQAILQQARIALRGPPG-PMGLTGRPGPVGGPGSSGAKGESGDPGPQG 562
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
P G +GPPGP G PG +G G G G GEPG KG+ G
Sbjct: 563 PRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 601
Score = 112 bits (281), Expect = 5e-25
Identities = 79/206 (38%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 184 PLAHPVPRQ-------RRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTG------EKGPAG 230
P+ +P PR R G G G+ G PG G G KGDRG+ G E GP G
Sbjct: 755 PIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEG 814
Query: 231 PPGLLGP---PGPRGLPGEMGR---------PGPPGPPGPAGNPG-PSPNSPQGAL-YSL 276
P G GP PGP G GE G+ PG GP G G PG P N +GA +
Sbjct: 815 PKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAG 874
Query: 277 QPPTDKDNGDSRLASAIVDTVLAGVPGPR------GPPGPPGPPGPRGPPGPPGTPGSQG 330
+P G + + G PGP+ GPPGPPG GP+GP GP G PG +G
Sbjct: 875 KPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKG 934
Query: 331 LAGERGTVGPSGEPGVKGEEGEKAAT 356
G G G G PG +GE G + T
Sbjct: 935 PPGPPGKDGLPGHPGQRGETGFQGKT 960
Score = 100 bits (250), Expect = 2e-21
Identities = 73/165 (44%), Positives = 76/165 (46%), Gaps = 43/165 (26%)
Query: 184 PLAHPVPRQRR----PTGPAGPPG---QTGPPGPAGPPGS---KGDRGQTGEKGPAGPPG 233
P P P R P G G PG Q GPPGP GPPG KGD G GEKG G G
Sbjct: 1400 PAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIG 1459
Query: 234 LLGPPGP------RGLPGEMGRPGP------PGPPGPAGNPGP----SPNSPQGALYSLQ 277
L+GPPG RGLPG G PG PGP GP G PGP P P+G S
Sbjct: 1460 LIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTG 1519
Query: 278 PPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGP 322
P K GDS G+PGP PG PGPPG P P
Sbjct: 1520 PAGQK--GDS------------GLPGP---PGSPGPPGEVIQPLP 1547
Score = 69.3 bits (168), Expect = 6e-12
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 155 ERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPP 214
E+ D LP + +P + +P GPAGP G GPPG GP
Sbjct: 1466 EQGEKGDRGLPGTQGSPGAKGDGGIP----------------GPAGPLGPPGPPGLPGPQ 1509
Query: 215 GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP 252
G KG++G TG G G GL GPPG G PGE+ +P P
Sbjct: 1510 GPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLP 1547
Score = 66.6 bits (161), Expect = 4e-11
Identities = 65/204 (31%), Positives = 71/204 (34%), Gaps = 83/204 (40%)
Query: 194 RPTGPAGPPGQTGPPGPAGPP---GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP 250
+PT P P + GP PA S G GEKG G P ++ P G+ E
Sbjct: 392 KPTSP--PNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEP----GMLVE---- 441
Query: 251 GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
GPPGP GPAG GP LQ PT G PG G GP
Sbjct: 442 GPPGPAGPAGIMGPP---------GLQGPT-------------------GPPGDPGDRGP 473
Query: 311 PGP---PGPRGPPGPPGT---------------------------------------PGS 328
PG PG G PGPPGT PG
Sbjct: 474 PGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGP 533
Query: 329 QGLAGERGTVGPSGEPGVKGEEGE 352
GL G G VG G G KGE G+
Sbjct: 534 MGLTGRPGPVGGPGSSGAKGESGD 557
Score = 66.6 bits (161), Expect = 4e-11
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
+P P + G GP G GPPGP G PG +G +G G GPAG G G PGP
Sbjct: 1475 LPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGP-- 1532
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDN 284
PG PGPPG P P +S + ++ D D+
Sbjct: 1533 -------PGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADD 1567
>gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo
sapiens]
Length = 678
Score = 140 bits (352), Expect = 3e-33
Identities = 87/215 (40%), Positives = 103/215 (47%), Gaps = 42/215 (19%)
Query: 200 GPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP--- 256
GPPG+ GPPGP GPPG G G G++GP GPP GPPGP G PG+ G PG PG P
Sbjct: 26 GPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPP---GPPGPAGEPGKPGAPGKPGTPGAD 82
Query: 257 ---GPAGNPG----------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GP G+PG P +G P G + L + G PG
Sbjct: 83 GLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPG 142
Query: 304 PRGPPGPPGPPGPRG---------------PPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
RGPPGPPGPPGPRG PPG G PG G+ G +G G GEPG +G
Sbjct: 143 RRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQG 202
Query: 349 EEGEKAATAE-GE-------GVQQLREALKILAER 375
+GE+ E GE G Q LR I+ ++
Sbjct: 203 HKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDK 237
Score = 126 bits (316), Expect = 4e-29
Identities = 71/169 (42%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTG---EKGPAGPPGLLGPPGPRGLPGE 246
P ++ G G G+ G G GPPG++G RG TG +KG G GL G PGP+GLPG
Sbjct: 198 PGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGA 257
Query: 247 MGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRG 306
G G GPPG AG G + L P GD+ L + G+PG +G
Sbjct: 258 PGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGP----KGDTGLPGVDGRDGIPGMPGTKG 313
Query: 307 PPGPPGPPGP---RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
PG PGPPG +G PG PG PG++G+AGE+G+ G G+PG G G+
Sbjct: 314 EPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGK 362
Score = 125 bits (313), Expect = 1e-28
Identities = 79/204 (38%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G +G PGQ GPPG GP G +G G GE GP G PGL G G G PG G PGPPG P
Sbjct: 358 GNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLP 417
Query: 257 GPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
G G+ G P P QGA + G++ + D G+PGP+G G PG
Sbjct: 418 GMKGDRGVVGEPGPKGEQGA--------SGEEGEAGERGELGD---IGLPGPKGSAGNPG 466
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQQLREALKIL 372
PG RGP G G PG +G G G G GE G G G + Q +++ +
Sbjct: 467 EPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQ----V 522
Query: 373 AERVLILEHMIGIHDPLASPEGGS 396
RV I EH + L P+ G+
Sbjct: 523 CMRV-IQEHFAEMAASLKRPDSGA 545
Score = 122 bits (307), Expect = 5e-28
Identities = 70/155 (45%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP G PG G G GPPG G +G G +G G PGL GP G GLPG GR G PG P
Sbjct: 250 GPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMP 309
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
G G PG P P A P G +A T G PG G G G PG
Sbjct: 310 GTKGEPG-KPGPPGDAGLQGLPGVPGIPGAKGVAGEKGST---GAPGKPGQMGNSGKPGQ 365
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
+GPPG G G QGL G RG +GP G PG+ G+ G
Sbjct: 366 QGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLG 400
Score = 121 bits (304), Expect = 1e-27
Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 44/207 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G G PG G PGP G PG KGDRG GE GP G G G G G GE+G G PGP
Sbjct: 400 GSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK 459
Query: 257 GPAGNPG----------------------PSPNSPQG-----ALYSLQPPTDKDNGDSRL 289
G AGNPG P P QG L +Q P + D +
Sbjct: 460 GSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHI 519
Query: 290 ASAIV-----------------DTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLA 332
+ D+ G+PG GPPGPPGPPG G PG G G G+
Sbjct: 520 KQVCMRVIQEHFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIK 579
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEG 359
G G +G G G GE+GE+ G
Sbjct: 580 GPPGALGLRGPKGDLGEKGERGPPGRG 606
Score = 111 bits (278), Expect = 1e-24
Identities = 79/195 (40%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGP------------PGQTGPPGPAGPPGSKGDRGQTGEKG 227
P +P A QR P G AGP PG GP G G PG G G G G
Sbjct: 251 PQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPG 310
Query: 228 PAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGP--SPNSPQGALYSLQPPTDKDNG 285
G PG GPPG GL G G PG PG G AG G +P P S +P G
Sbjct: 311 TKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPG 370
Query: 286 DSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPG 345
+ G GP G PG PG G G PG PG PG GL G +G G GEPG
Sbjct: 371 EVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPG 430
Query: 346 VKGEEGEKAATAEGE 360
KGE+G A+ EGE
Sbjct: 431 PKGEQG--ASGEEGE 443
Score = 106 bits (264), Expect = 5e-23
Identities = 84/230 (36%), Positives = 90/230 (39%), Gaps = 70/230 (30%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA 211
EA ER D LP P+ + E P R P G G PG GP GP
Sbjct: 443 EAGERGELGDIGLPGPKGSAGNPGE-------------PGLRGPEGSRGLPGVEGPRGPP 489
Query: 212 GPPGSKGDRGQTGEKGPAGPPG--------------------------LLGPP-GPRGLP 244
GP G +G++G TG G GPPG L P G GLP
Sbjct: 490 GPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEMAASLKRPDSGATGLP 549
Query: 245 GEMGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTD---------KDNGDSR 288
G G PGPPGPPG G PG P P GAL P D G +
Sbjct: 550 GRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPNG 609
Query: 289 LASAIVDTVLAGVPGP-----------RGPPGPPGPPGPRGPPGPPGTPG 327
L AI L G PGP RGPPG G PG GPPGPPG PG
Sbjct: 610 LPGAIG---LPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGLPG 656
Score = 42.0 bits (97), Expect = 0.001
Identities = 37/102 (36%), Positives = 40/102 (39%), Gaps = 25/102 (24%)
Query: 168 ESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPP--GQTGPPGPAGPPGSKGDRGQTGE 225
E PP + LP AI L G GP G+ G G GPP
Sbjct: 599 ERGPPGRGPNGLPGAIGLP----------GDPGPASYGRNGRDGERGPP----------- 637
Query: 226 KGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGP-AGNPGPSP 266
G AG PG+ GPPGP GLPG G A N GP P
Sbjct: 638 -GVAGIPGVPGPPGPPGLPGFCEPASCTMQAGQRAFNKGPDP 678
>gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]
Length = 654
Score = 140 bits (352), Expect = 3e-33
Identities = 84/208 (40%), Positives = 101/208 (48%), Gaps = 44/208 (21%)
Query: 184 PLAHPVPRQRRPT-GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP-------------- 228
P P R +R G +GPPGQ PGP GPPG KGD+G+ G++GP
Sbjct: 121 PAGPPGKRGKRGRRGESGPPGQ---PGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSA 177
Query: 229 ----------------AGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGA 272
AGPPG GPPGPRG PG+ G+ GP G PG G PG QG
Sbjct: 178 DQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKP--GEQGL 235
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLA 332
+ L PP K +I + G+ G +G PG PG G G PGP G PG QG
Sbjct: 236 MGPLGPPGQK--------GSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEK 287
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEGE 360
G+ G GP G+ G KG+ G AA +GE
Sbjct: 288 GDAGENGPKGDTGEKGDPGSSAAGIKGE 315
Score = 130 bits (328), Expect = 2e-30
Identities = 76/182 (41%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
Q P GP GPPG GPPG G G +G G GE G G GL+GP GP G G +G PG
Sbjct: 193 QAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPG 252
Query: 252 PPGPPGPAGNPGPSPNSPQGALYSL--QPPTDKDNGDSRLASAIVDTVLAGVPGP----- 304
PG G G PG Q + +P + GD+ DT G PG
Sbjct: 253 IPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGI 312
Query: 305 RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGV------KGEEGEKAATAE 358
+G PG G PG +G PG PG PG G+ GE G +GP GEPG+ KGE GE
Sbjct: 313 KGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR 372
Query: 359 GE 360
GE
Sbjct: 373 GE 374
Score = 125 bits (313), Expect = 1e-28
Identities = 77/190 (40%), Positives = 88/190 (46%), Gaps = 51/190 (26%)
Query: 197 GPAGPPGQTGPPG-------------------------PAGPPGSKGDRGQTGEKGPAGP 231
GP GPPGQ G G P GPPG +G +G GE+G G
Sbjct: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGI 471
Query: 232 PGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLA 290
PG+ G G +G G+MG PG G G G PG P N +G + GDS
Sbjct: 472 PGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKG-----------EKGDS--- 517
Query: 291 SAIVDTVLAGVPGPRGPP--GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
G+PGP+GP GPPGPPGP GPPGP G G G G G +GP G G KG
Sbjct: 518 ---------GMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKG 568
Query: 349 EEGEKAATAE 358
E GEK A E
Sbjct: 569 ERGEKGAMGE 578
Score = 115 bits (288), Expect = 8e-26
Identities = 78/195 (40%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP-----RGLPGE 246
Q+ G G GQ G PGP G PG +G++G GE GP G G G PG +G PGE
Sbjct: 259 QKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGE 318
Query: 247 MGRPGPPGPPGPAGNPG-------PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTV 297
GRPG G PG G PG P PQG L L P T + G+
Sbjct: 319 SGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGL-PGTKGERGE----------- 366
Query: 298 LAGVPG--PRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
AG PG RG PG PGP G +G G G GS+G GE+G G G G G++G++ A
Sbjct: 367 -AGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGA 425
Query: 356 TAEGEGVQQLREALK 370
T + L EAL+
Sbjct: 426 TEIIDYNGNLHEALQ 440
Score = 115 bits (288), Expect = 8e-26
Identities = 76/183 (41%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 195 PTGPAGPPGQTGPPGPAGPPG---------------SKGDRGQTGEKGPAGPPGLLGPPG 239
P GP GP G GP G G PG GD G TGEKG G PGL G G
Sbjct: 450 PPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANG 509
Query: 240 PRGLPGEMGRPGPPGPP--GPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDT 296
+G G+ G PGP GP GP G PGP P P G + L P D A
Sbjct: 510 MKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGP-HGLPGPKGTDGPMGPHGPA---- 564
Query: 297 VLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGL------AGERGTVGPSGEPGVKGEE 350
G G RG G G PGPRGP G PG G GL GE+G +G GE G +G +
Sbjct: 565 ---GPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK 621
Query: 351 GEK 353
GEK
Sbjct: 622 GEK 624
Score = 114 bits (285), Expect = 2e-25
Identities = 80/233 (34%), Positives = 96/233 (41%), Gaps = 67/233 (28%)
Query: 165 PAPESTPPTWNEDF---LPDAIPLAHPVPRQRRPTGPAGPPGQTGP-------------- 207
P P P +D +P +P P ++ GP GPPGQ G
Sbjct: 203 PGPRGPPGDTGKDGPRGMP-GVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKG 261
Query: 208 -------------PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP-----RGLPGEMGR 249
PGP G PG +G++G GE GP G G G PG +G PGE GR
Sbjct: 262 EPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGR 321
Query: 250 PGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
PG G PG G PG P PQG + L G+P
Sbjct: 322 PGQKGEPGLPGLPGLPGIKGEPGFIGPQG-----------------------EPGLPGLP 358
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G +G G GPPG RG G PG PG +G GE GT GP G G +GE+G+ A
Sbjct: 359 GTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGA 410
Score = 104 bits (260), Expect = 1e-22
Identities = 74/201 (36%), Positives = 85/201 (42%), Gaps = 53/201 (26%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG----- 251
G +G PGQ G PG G PG G +G+ G GP G PGL G PG +G GE G PG
Sbjct: 317 GESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERG 376
Query: 252 PPGPPGPAGNPGPS-PNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPG 309
PG PGP G G S P+G+ D+ + GDS G GPRGPPG
Sbjct: 377 EPGAPGPKGKQGESGTRGPKGS------KGDRGEKGDS------------GAQGPRGPPG 418
Query: 310 PPG----------------------------PPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
G PPGP GP G G G QG G G G
Sbjct: 419 QKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQ 478
Query: 342 GEPGVKGEEGEKAATAEGEGV 362
G G KG+ G+ T E G+
Sbjct: 479 GLKGSKGDMGDPGMTGEKGGI 499
Score = 94.4 bits (233), Expect = 2e-19
Identities = 64/155 (41%), Positives = 67/155 (43%), Gaps = 35/155 (22%)
Query: 197 GPAGPP--GQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
GP GP G GPPGP GPPG G G G KG GP G GP GP+G GE G G PG
Sbjct: 521 GPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPG 580
Query: 255 PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPP 314
P GP G PG D + G L G PGPRG G G
Sbjct: 581 PRGPYGLPGK----------------DGEPG------------LDGFPGPRGEKGDLGEK 612
Query: 315 GP---RGPPGPPGTPGSQGLAGERG--TVGPSGEP 344
G RG G G PG GL G +GP G P
Sbjct: 613 GEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLP 647
Score = 82.0 bits (201), Expect = 1e-15
Identities = 58/149 (38%), Positives = 63/149 (42%), Gaps = 33/149 (22%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG 239
P P H P P G GP G GP GP GP G KG+R GEKG G P GP G
Sbjct: 530 PPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGER---GEKGAMGEP---GPRG 583
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
P GLPG+ G PG G PGP G G D G+ +
Sbjct: 584 PYGLPGKDGEPGLDGFPGPRGEKG-------------------DLGEKG------EKGFR 618
Query: 300 GVPGPRGPPGPPGPPGPRGP--PGPPGTP 326
GV G +G PG PG G P GP G P
Sbjct: 619 GVKGEKGEPGQPGLDGLDAPCQLGPDGLP 647
>gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens]
Length = 642
Score = 140 bits (352), Expect = 3e-33
Identities = 84/208 (40%), Positives = 101/208 (48%), Gaps = 44/208 (21%)
Query: 184 PLAHPVPRQRRPT-GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP-------------- 228
P P R +R G +GPPGQ PGP GPPG KGD+G+ G++GP
Sbjct: 121 PAGPPGKRGKRGRRGESGPPGQ---PGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSA 177
Query: 229 ----------------AGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGA 272
AGPPG GPPGPRG PG+ G+ GP G PG G PG QG
Sbjct: 178 DQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKP--GEQGL 235
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLA 332
+ L PP K +I + G+ G +G PG PG G G PGP G PG QG
Sbjct: 236 MGPLGPPGQK--------GSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEK 287
Query: 333 GERGTVGPSGEPGVKGEEGEKAATAEGE 360
G+ G GP G+ G KG+ G AA +GE
Sbjct: 288 GDAGENGPKGDTGEKGDPGSSAAGIKGE 315
Score = 130 bits (328), Expect = 2e-30
Identities = 76/182 (41%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
Q P GP GPPG GPPG G G +G G GE G G GL+GP GP G G +G PG
Sbjct: 193 QAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPG 252
Query: 252 PPGPPGPAGNPGPSPNSPQGALYSL--QPPTDKDNGDSRLASAIVDTVLAGVPGP----- 304
PG G G PG Q + +P + GD+ DT G PG
Sbjct: 253 IPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGI 312
Query: 305 RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGV------KGEEGEKAATAE 358
+G PG G PG +G PG PG PG G+ GE G +GP GEPG+ KGE GE
Sbjct: 313 KGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR 372
Query: 359 GE 360
GE
Sbjct: 373 GE 374
Score = 125 bits (313), Expect = 1e-28
Identities = 77/190 (40%), Positives = 88/190 (46%), Gaps = 51/190 (26%)
Query: 197 GPAGPPGQTGPPG-------------------------PAGPPGSKGDRGQTGEKGPAGP 231
GP GPPGQ G G P GPPG +G +G GE+G G
Sbjct: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGI 471
Query: 232 PGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLA 290
PG+ G G +G G+MG PG G G G PG P N +G + GDS
Sbjct: 472 PGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKG-----------EKGDS--- 517
Query: 291 SAIVDTVLAGVPGPRGPP--GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
G+PGP+GP GPPGPPGP GPPGP G G G G G +GP G G KG
Sbjct: 518 ---------GMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKG 568
Query: 349 EEGEKAATAE 358
E GEK A E
Sbjct: 569 ERGEKGAMGE 578
Score = 115 bits (288), Expect = 8e-26
Identities = 78/195 (40%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP-----RGLPGE 246
Q+ G G GQ G PGP G PG +G++G GE GP G G G PG +G PGE
Sbjct: 259 QKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGE 318
Query: 247 MGRPGPPGPPGPAGNPG-------PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTV 297
GRPG G PG G PG P PQG L L P T + G+
Sbjct: 319 SGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGL-PGTKGERGE----------- 366
Query: 298 LAGVPG--PRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
AG PG RG PG PGP G +G G G GS+G GE+G G G G G++G++ A
Sbjct: 367 -AGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGA 425
Query: 356 TAEGEGVQQLREALK 370
T + L EAL+
Sbjct: 426 TEIIDYNGNLHEALQ 440
Score = 114 bits (285), Expect = 2e-25
Identities = 80/233 (34%), Positives = 96/233 (41%), Gaps = 67/233 (28%)
Query: 165 PAPESTPPTWNEDF---LPDAIPLAHPVPRQRRPTGPAGPPGQTGP-------------- 207
P P P +D +P +P P ++ GP GPPGQ G
Sbjct: 203 PGPRGPPGDTGKDGPRGMP-GVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKG 261
Query: 208 -------------PGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP-----RGLPGEMGR 249
PGP G PG +G++G GE GP G G G PG +G PGE GR
Sbjct: 262 EPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGR 321
Query: 250 PGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
PG G PG G PG P PQG + L G+P
Sbjct: 322 PGQKGEPGLPGLPGLPGIKGEPGFIGPQG-----------------------EPGLPGLP 358
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G +G G GPPG RG G PG PG +G GE GT GP G G +GE+G+ A
Sbjct: 359 GTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGA 410
Score = 114 bits (284), Expect = 2e-25
Identities = 76/189 (40%), Positives = 81/189 (42%), Gaps = 47/189 (24%)
Query: 195 PTGPAGPPGQTGPPGPAGPPG---------------SKGDRGQTGEKGPAGPPGLLGPPG 239
P GP GP G GP G G PG GD G TGEKG G PGL G G
Sbjct: 450 PPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANG 509
Query: 240 PRGLPGEMGRPGPPGPP--GPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDT 296
+G G+ G PGP GP GP G PGP P P G + L P
Sbjct: 510 MKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGP-HGLPGPK---------------- 552
Query: 297 VLAGVPGPRGPPGPPGPPGPR---------GPPGPPGTPGSQGLAGERGTVGPSGEPGVK 347
G GP GP GP GP G R GP GP G PG G G G GP GE G
Sbjct: 553 ---GTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDL 609
Query: 348 GEEGEKAAT 356
GE+GEK +
Sbjct: 610 GEKGEKVTS 618
Score = 104 bits (260), Expect = 1e-22
Identities = 74/201 (36%), Positives = 85/201 (42%), Gaps = 53/201 (26%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG----- 251
G +G PGQ G PG G PG G +G+ G GP G PGL G PG +G GE G PG
Sbjct: 317 GESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERG 376
Query: 252 PPGPPGPAGNPGPS-PNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPG 309
PG PGP G G S P+G+ D+ + GDS G GPRGPPG
Sbjct: 377 EPGAPGPKGKQGESGTRGPKGS------KGDRGEKGDS------------GAQGPRGPPG 418
Query: 310 PPG----------------------------PPGPRGPPGPPGTPGSQGLAGERGTVGPS 341
G PPGP GP G G G QG G G G
Sbjct: 419 QKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQ 478
Query: 342 GEPGVKGEEGEKAATAEGEGV 362
G G KG+ G+ T E G+
Sbjct: 479 GLKGSKGDMGDPGMTGEKGGI 499
Score = 82.0 bits (201), Expect = 1e-15
Identities = 45/93 (48%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 188 PVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEM 247
P P+ GP GPPG GPPGP GP G G +G G GP GP GP G RG G M
Sbjct: 520 PGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGP---AGPKGERGEKGAM 576
Query: 248 GRPGPPGP---PGPAGNPG----PSPNSPQGAL 273
G PGP GP PG G PG P P +G L
Sbjct: 577 GEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDL 609
Score = 77.4 bits (189), Expect = 2e-14
Identities = 41/90 (45%), Positives = 43/90 (47%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG 239
P P H P P G GP G GP GP GP G KG+RG+ G G GP G G PG
Sbjct: 530 PPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPG 589
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPGPSPNSP 269
G PG G PGP G G G G SP
Sbjct: 590 KDGEPGLDGFPGPRGEKGDLGEKGEKVTSP 619
>gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]
Length = 1745
Score = 139 bits (351), Expect = 4e-33
Identities = 73/158 (46%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GPPG G G G PG +G+ G G+ GP GP G+LGP G G G +G GPPGPP
Sbjct: 881 GPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPP 940
Query: 257 GPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPG 315
GP G G P +GA L PP G A L G PGP+G PG PGP G
Sbjct: 941 GPPGEQGLPGLEGREGAKGELGPPGPL--GKEGPAG------LRGFPGPKGGPGDPGPTG 992
Query: 316 PRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
+G GPPG G+ G GERG +GP+G G+ G+ G +
Sbjct: 993 LKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSE 1030
Score = 135 bits (340), Expect = 7e-32
Identities = 81/208 (38%), Positives = 105/208 (50%), Gaps = 26/208 (12%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGL 243
P A P +R P+G G G+ G G G PG G G+TG G GPPG +GP G RG+
Sbjct: 1303 PGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGI 1362
Query: 244 PGEMGRP---------GPPGPPGPAGNPG-PSPNSPQ------GALYSLQPPTDK-DNGD 286
PG +G P GPPGP GP+G PG P+ G + + PP + + GD
Sbjct: 1363 PGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGD 1422
Query: 287 SRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTP---GSQGLAGERGTVGPSGE 343
L + G PGP+G PGPPGP G G PGPPG G +G G G++GP G+
Sbjct: 1423 QGLPG------VQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGD 1476
Query: 344 PGVKGEEGEKAATAEGEGVQQLREALKI 371
G G G A AE G+++ R + +
Sbjct: 1477 TGPAGPPGPPGAPAELHGLRRRRRFVPV 1504
Score = 131 bits (330), Expect = 1e-30
Identities = 75/171 (43%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPP- 253
P G GPPG GPPG G PG +G G GE GP GP G GP G RG PG G PG P
Sbjct: 930 PLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPG 989
Query: 254 --------GPPGPAG-NPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP 304
GPPGP G N P P G + P G S + G G
Sbjct: 990 PTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLP-----GQSGSEGPVGPAGKKGSRGE 1044
Query: 305 RGPPGPPGP---PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
RGPPGP G PGP GP GPPG G G G++G VG G G KG++G+
Sbjct: 1045 RGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGD 1095
Score = 131 bits (330), Expect = 1e-30
Identities = 74/175 (42%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 187 HPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
H P R P GP G G G PG G PG+ G++G+ G+ G GPPG G PGP+G GE
Sbjct: 1171 HGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIPGPKGDIGE 1230
Query: 247 MGRPGPPGPPGPAGNPGPSPN-------SPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G GP G GP G GP P G L PP GD ++ +
Sbjct: 1231 KGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPP-----GDPGVSG------ID 1279
Query: 300 GVPGPRGPPGP---PGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G PG +G PG PGPPG G PG PG PG +G +G G G GE G KGE G
Sbjct: 1280 GSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPG 1334
Score = 128 bits (322), Expect = 9e-30
Identities = 72/159 (45%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
GP GP G TG PGP G PG G +G+ G +GP GP GL GP GP G G+MGRPG G
Sbjct: 479 GPPGPVGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGAR 538
Query: 257 GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP 316
G G+ GP + L L P +K D G PGP G G G GP
Sbjct: 539 GLPGDTGPKGDRGFDGLPGL--PGEKGQRG--------DFGHVGQPGPPGEDGERGAEGP 588
Query: 317 RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
GP G G PG +GL G RG+ GP+G PGV G +G A
Sbjct: 589 PGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGA 627
Score = 127 bits (320), Expect = 2e-29
Identities = 85/216 (39%), Positives = 97/216 (44%), Gaps = 48/216 (22%)
Query: 186 AHPVPRQRRPTGPAGP---PGQTGPPGPAGPPGSKGDRGQTGEKGPAG------------ 230
A+ P +R P GPAG PGQ+G GP GP G KG RG+ G GP G
Sbjct: 1005 ANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLG 1064
Query: 231 PPGLLGPPGPRGLPGEMGRPG------------PPGPPG---PAGNPGPSPNSPQGALYS 275
PPG GP G G G++G PG PPG PG PAG+PGP GA
Sbjct: 1065 PPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPP--GADGAQGR 1122
Query: 276 LQPP----TDKDNGDSRLASAIVDTVLAGVPGP------------RGPPGPPGPPGPRGP 319
PP D+G I L G+PGP GP G PGP GP+GP
Sbjct: 1123 RGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGP 1182
Query: 320 PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAA 355
G GTPG G G+ G VG GE G G+ G A
Sbjct: 1183 TGSEGTPGLPGGVGQPGAVGEKGERGDAGDPGPPGA 1218
Score = 127 bits (319), Expect = 2e-29
Identities = 75/166 (45%), Positives = 84/166 (50%), Gaps = 16/166 (9%)
Query: 195 PTGPAGPPGQTGPPG---PAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP- 250
P G G G+TG PG GPPGS+G+RGQ G G GP G +G G G+PGE G P
Sbjct: 813 PIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPG 872
Query: 251 --GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
GPPG PGP G PG +P G+ AGV GP+G
Sbjct: 873 LQGPPGFPGPKGPPGHQGKDG-------RPGHPGQRGELGFQGQTGPPGPAGVLGPQGKT 925
Query: 309 GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE---PGVKGEEG 351
G GP G RGPPGPPG PG QGL G G G GE PG G+EG
Sbjct: 926 GEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEG 971
Score = 126 bits (316), Expect = 4e-29
Identities = 76/178 (42%), Positives = 87/178 (48%), Gaps = 21/178 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGP---PGLLGPPGPRGLPGEMGRPG 251
P G G G +GP G AGPPG KG G+ G KG GP PG LGPPG G+ G G PG
Sbjct: 1224 PKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPG 1283
Query: 252 PPGPPGPAGNPGPSPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRGPPGP 310
G PG G PGP S G + PP + +G + G PGP GPPG
Sbjct: 1284 EKGDPGDVGGPGPPGAS--GEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGR 1341
Query: 311 PGPPGPRGPP---------------GPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
GP G RGPP G PG G+ G G G +GPSG PG+KG+ G K
Sbjct: 1342 TGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPK 1399
Score = 123 bits (309), Expect = 3e-28
Identities = 73/172 (42%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP G G G GP GP G G GQ+G +GP GP G G G RG PG G+ G PG
Sbjct: 999 PPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPG 1058
Query: 255 PPGPAGNPGPS-PNSPQGALYSLQPPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPPG 312
P GP G PG + P+ +G + P K + GD D G PG RGP G PG
Sbjct: 1059 PLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKG------DAGPPGQPGIRGPAGHPG 1112
Query: 313 PPGP------RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
PPG RGPPG G G G+ G G +GP G G+ G GEK +
Sbjct: 1113 PPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGD 1164
Score = 123 bits (308), Expect = 4e-28
Identities = 76/184 (41%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P G G G G GP G PG +G +G TG +G G PG +G PG G GE G G PG
Sbjct: 1155 PPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERGDAGDPG 1214
Query: 255 PPGPAGNPGP-------SPNSPQGALYSLQPPTDK-DNGDSRLASAIVDTVLAGVPGPRG 306
PPG G PGP + P GA PP K G+ ++ T G+PG G
Sbjct: 1215 PPGAPGIPGPKGDIGEKGDSGPSGA---AGPPGKKGPPGEDGAKGSVGPT---GLPGDLG 1268
Query: 307 PPGPP------------GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKA 354
PPG P G PG G PGPPG G G G G GPSG G +G EGEK
Sbjct: 1269 PPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKG 1328
Query: 355 ATAE 358
A E
Sbjct: 1329 AKGE 1332
Score = 122 bits (307), Expect = 5e-28
Identities = 72/167 (43%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLG---------PPGPRGLPG 245
P G G PG TG G GPPG G G GE+GP GP G +G P GP G G
Sbjct: 981 PKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKG 1040
Query: 246 EMGRPGPPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP 304
G GPPGP G G PGP P P GA + GD A G G
Sbjct: 1041 SRGERGPPGPTGKDGIPGPLGPLGPPGA-----AGPSGEEGDKGDVGAPGHKGSKGDKGD 1095
Query: 305 RGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
GPPG PG GP G PGPPG G+QG G G G G+ GV+G G
Sbjct: 1096 AGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVG 1142
Score = 121 bits (304), Expect = 1e-27
Identities = 80/206 (38%), Positives = 95/206 (46%), Gaps = 35/206 (16%)
Query: 167 PESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEK 226
P T P + F D +P +P ++ G G GQ GPPG G G++G G TG+
Sbjct: 541 PGDTGPKGDRGF--DGLP---GLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQA 595
Query: 227 GPAGPPGLLGP---PGPRG---------LPGEMGRPGPPGPPGPAGNPG-------PSPN 267
G GP GLLGP PGP G PG G GPPG PGP G G P P
Sbjct: 596 GEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQ 655
Query: 268 SPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPG 327
G PP G+ + L G GP G PG GP G +G GPPG+ G
Sbjct: 656 GLIGTPGEKGPP-----GNPGIPG------LPGSDGPLGHPGHEGPTGEKGAQGPPGSAG 704
Query: 328 SQGLAGERGTVGPSGEPGVKGEEGEK 353
G G RG G SG G++GE+GEK
Sbjct: 705 PPGYPGPRGVKGTSGNRGLQGEKGEK 730
Score = 121 bits (304), Expect = 1e-27
Identities = 74/175 (42%), Positives = 83/175 (47%), Gaps = 36/175 (20%)
Query: 195 PTGPAGPPGQTG------PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
PTG AG PG G PGP G PG G G G KG GPPG GPPG +G G G
Sbjct: 591 PTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQG 650
Query: 249 RPGP------PGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
PGP PG GP GNPG P + P G P + G+
Sbjct: 651 LPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLG-----HPGHEGPTGEK----------- 694
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G +GPPG GPPG GP G GT G++GL GE+G G G PG KG+ G K
Sbjct: 695 ----GAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLK 745
Score = 120 bits (301), Expect = 2e-27
Identities = 72/182 (39%), Positives = 89/182 (48%), Gaps = 27/182 (14%)
Query: 192 QRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG--- 248
+R P GP GPPG+ G PG G G+KG+ G G G GP GL G PGP+G PG+ G
Sbjct: 933 ERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTG 992
Query: 249 ---------------RPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASA 292
PG GP GPAG G P + +G + P K + R
Sbjct: 993 LKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEG---PVGPAGKKGSRGERGPPG 1049
Query: 293 IVDTVLAGVPGPRGPPGPP---GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
T G+PGP GP GPP GP G G G G PG +G G++G GP G+PG++G
Sbjct: 1050 --PTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGP 1107
Query: 350 EG 351
G
Sbjct: 1108 AG 1109
Score = 117 bits (293), Expect = 2e-26
Identities = 86/229 (37%), Positives = 99/229 (43%), Gaps = 26/229 (11%)
Query: 152 EAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA 211
E AE P P L P P + P A R G GP G G G
Sbjct: 505 EGAEGPQGP-RGLQGPHGPPGRVGKMGRPGA-------DGARGLPGDTGPKGDRGFDGLP 556
Query: 212 GPPGSKGDRGQTGEKGPAGPPG------LLGPPGPRGL---PGEMGRPGPPGPPGPAGNP 262
G PG KG RG G G GPPG GPPGP G PG G GP G PGP G P
Sbjct: 557 GLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRP 616
Query: 263 GPSP-NSPQGALYSLQPPTDK----DNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPR 317
G + + GA ++ PP + G+ L G PG +GPPG PG PG
Sbjct: 617 GVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLP 676
Query: 318 GPPGPPGTPGSQGLAGERGTVGP---SGEPGVKGEEGEKAATAEGEGVQ 363
G GP G PG +G GE+G GP +G PG G G K T+ G+Q
Sbjct: 677 GSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVK-GTSGNRGLQ 724
Score = 117 bits (293), Expect = 2e-26
Identities = 73/181 (40%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 184 PLAHPVPRQRRPTGPAG---PPGQTGPPGPAGPPGSKG---DRGQTGEKGPAGPPGLLGP 237
PL HP PTG G PPG GPPG GP G KG +RG GEKG G G G
Sbjct: 681 PLGHP--GHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGF 738
Query: 238 PGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV 297
G GL G+ G+PG PGP G G GP + Q + G A
Sbjct: 739 KGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAG----------EEGPPGSAGEKGKLG 788
Query: 298 LAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
+ G+PG G PGP G G GP GP G G G G+ G G G PG +GE G+ AT
Sbjct: 789 VPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATG 848
Query: 358 E 358
+
Sbjct: 849 Q 849
Score = 115 bits (289), Expect = 6e-26
Identities = 69/189 (36%), Positives = 84/189 (44%), Gaps = 26/189 (13%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR 249
P + G G G+ G PGP G G +G +GQ G+ G GPPG G G G+PG G
Sbjct: 736 PGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLPGY 795
Query: 250 PGPPGPPGPAGNPGP-------------------SPNSPQGAL-------YSLQPPTDKD 283
PG PGP G G PGP P G+ + QP D
Sbjct: 796 PGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATGQPGPKGD 855
Query: 284 NGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE 343
G + L G+ GP G PGP GPPG +G G PG PG +G G +G GP G
Sbjct: 856 VGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGP 915
Query: 344 PGVKGEEGE 352
GV G +G+
Sbjct: 916 AGVLGPQGK 924
Score = 115 bits (289), Expect = 6e-26
Identities = 71/174 (40%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 197 GPAGPPGQTGPPGPAG------PPGSKGDRGQTGEKGP---AGPPGLLGPPGPRGLPGEM 247
GP G PG GPPG G PG KGD G G GP +G PG GPPG RG G M
Sbjct: 1259 GPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHM 1318
Query: 248 GRPG---------PPGPPGPAGNPGP-SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV 297
GR G PGP GP G GP P G + G + + +
Sbjct: 1319 GREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRV--------GPEGLRGIPGPVGEPG 1370
Query: 298 LAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
L G PG GPPGP GP G G G G G +G G G +GP GE G KG++G
Sbjct: 1371 LLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGDQG 1424
Score = 112 bits (281), Expect = 5e-25
Identities = 75/189 (39%), Positives = 85/189 (44%), Gaps = 37/189 (19%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPG---SKGDRGQTGEKGPAGPPGLLGPPGP------ 240
P R P G GPPG G G GPPG KGD G G G GPPGL G PGP
Sbjct: 1102 PGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGE 1161
Query: 241 ---------RGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLAS 291
G PGP GP GP G+ G +P P G QP + G+ A
Sbjct: 1162 VGDVGSMGPH------GAPGPRGPQGPTGSEG-TPGLPGGV---GQPGAVGEKGERGDAG 1211
Query: 292 AIVDTVLAGVPGPR---------GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSG 342
G+PGP+ GP G GPPG +GPPG G GS G G G +GP G
Sbjct: 1212 DPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPG 1271
Query: 343 EPGVKGEEG 351
+PGV G +G
Sbjct: 1272 DPGVSGIDG 1280
Score = 99.8 bits (247), Expect = 4e-21
Identities = 68/186 (36%), Positives = 79/186 (42%), Gaps = 14/186 (7%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPA-------GPPGSKGDRGQTGEKGPAGPP 232
PD +P Q + AG G G P GPPG+ G +G G GP GPP
Sbjct: 353 PDFRAAEYPSRTQFQIFPGAGEKGAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPP 412
Query: 233 GLLG---PPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRL 289
G G PPGP GLP G PG G GP G P G + PP ++
Sbjct: 413 GFPGDPGPPGPAGLP---GIPGIDGIRGPPGTVIMMPFQFAGGSFK-GPPVSFQQAQAQA 468
Query: 290 ASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
+ G PGP G G PGP G G PG G G++G G RG GP G PG G+
Sbjct: 469 VLQQTQLSMKGPPGPVGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGK 528
Query: 350 EGEKAA 355
G A
Sbjct: 529 MGRPGA 534
Score = 62.8 bits (151), Expect = 6e-10
Identities = 31/68 (45%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 183 IPLAHPVPRQRRPTGPAGPPGQT---GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG 239
+P P + GP GP G GPPG AGP G KG +G G GP G G GPPG
Sbjct: 1425 LPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPG 1484
Query: 240 PRGLPGEM 247
P G P E+
Sbjct: 1485 PPGAPAEL 1492
Score = 60.1 bits (144), Expect = 4e-09
Identities = 61/226 (26%), Positives = 78/226 (34%), Gaps = 59/226 (26%)
Query: 176 EDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG-------- 227
E +LPD LA P P G+ P P KG + G KG
Sbjct: 218 ERYLPDCDNLA--------PAATVAPQGEPETPRPRRKGKGKGRKKGRGRKGKGRKKNKE 269
Query: 228 ---PAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPA------------------GNPGPSP 266
+ PP +P + P P PP P + P
Sbjct: 270 IWTSSPPPDSAENQTSTDIP-KTETPAPNLPPTPTPLVVTSTVTTGLNATILERSLDPDS 328
Query: 267 NSPQGALYSLQPPTDKDNGDS------RLASAIVDTVL-----AGVPGPRGPP------- 308
+ G L + D++ DS R A T AG G +G P
Sbjct: 329 GTELGTLETKAAREDEEGDDSTMGPDFRAAEYPSRTQFQIFPGAGEKGAKGEPAVIEKGQ 388
Query: 309 ---GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
GPPG PGP+G GP G PG G G+ G GP+G PG+ G +G
Sbjct: 389 QFEGPPGAPGPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDG 434
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 139 bits (349), Expect = 7e-33
Identities = 84/193 (43%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQ---------TGEKGPAG 230
P IP + +R G G PG GPPGP G PG KG+ G G G G
Sbjct: 118 PQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPG 177
Query: 231 PPGLLGPPGPRGLPGEMGRPGPP---GPPGPAGNPGPSPN------SPQG--ALYSLQPP 279
PPG+ G PGP G+PG +G PGPP GPPGP G PGP N P+G LQ P
Sbjct: 178 PPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP 237
Query: 280 TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
S I G G G GPPGPPG RGPPGPPG G +G GE+G G
Sbjct: 238 PGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPG--GEKGEKGEQGEPG 295
Query: 340 PSGEPGVKGEEGE 352
G+PG GE G+
Sbjct: 296 KRGKPGKDGENGQ 308
Score = 135 bits (339), Expect = 1e-31
Identities = 85/224 (37%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 165 PAPESTP-PTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGP------PGSK 217
P P P P F P +P + GP G G GPPGP G PG K
Sbjct: 739 PGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPK 798
Query: 218 GDRGQTGEKGPAGPPGL-----LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGA 272
GD G G+ GP GPPGL GPPGP G+PG +G+PG G PG G+PGP G
Sbjct: 799 GDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPG- 857
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPP------------------ 314
PP ++ + + G PGP GPPG PG P
Sbjct: 858 -----PPGERGSPG-----------IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMM 901
Query: 315 GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
GP GPPGP G PG G+ G +G G G+PG+ G GEK + E
Sbjct: 902 GPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGE 945
Score = 132 bits (333), Expect = 5e-31
Identities = 74/174 (42%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPP--- 253
G G PG G PGP GPPG +G +G G GP GP G+ GPPG G PG G PG P
Sbjct: 54 GLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHD 113
Query: 254 GPPGPAGNPGPS--------PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
G PGP G PG + P SP LQ P G + +++ +PGP+
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSP--GFPGLQGPPGPP-GIPGMKGEPGSIIMSSLPGPK 170
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
G PG PGPPG +G PGP G PG G G G +GP G PG+ G +G +G
Sbjct: 171 GNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQG 224
Score = 132 bits (331), Expect = 8e-31
Identities = 76/181 (41%), Positives = 91/181 (50%), Gaps = 32/181 (17%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P + P G G PGQ GPPG G PG G G G+KG G PG G PGP GLPG G
Sbjct: 1144 LPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPG-FGNPGPPGLPGLSG 1202
Query: 249 R---------PGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVD 295
+ PG PG PGP G PG P P G S P + G+
Sbjct: 1203 QKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGN--------- 1253
Query: 296 TVLAGVPGPRGPPGPPGPPGPR---GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
PGP+GPPG PGP G + GP GPPG PG+ G+ GE+G G G PG+ G +G+
Sbjct: 1254 ------PGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGD 1307
Query: 353 K 353
+
Sbjct: 1308 Q 1308
Score = 130 bits (326), Expect = 3e-30
Identities = 75/171 (43%), Positives = 88/171 (51%), Gaps = 20/171 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP G PG G PG GPPG KG G+ G GP G+ GPPGP G+PG+ G PG PG
Sbjct: 1004 PPGPKGNPGLPGQPGLIGPPGLKGT---IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPG 1060
Query: 255 PPGPAGNPG------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
G G+PG P P+G +P G+ + ++ D L G+PG G
Sbjct: 1061 QKGDKGDPGISSIGLPGLPGPKG-----EPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAK 1115
Query: 309 GPPGPPGPRGPPGPP------GTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PG PG G PGPP G PG+ GL GE G VG G PG G GEK
Sbjct: 1116 GQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEK 1166
Score = 128 bits (321), Expect = 1e-29
Identities = 76/171 (44%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Query: 197 GPAGPPGQTGPPGPA--GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G GPPG GPPG A GPPG G G+ G+KG GPPG+ PGP GL G+ G PG PG
Sbjct: 377 GIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGI-SIPGPPGLDGQPGAPGLPG 435
Query: 255 PPGPAG----------NPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
PPGPAG PGP P SP + D GD+ + T ++G P
Sbjct: 436 PPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDT--CFNCIGTGISGPP 493
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G G PG PGPPG G PG G G G G +G G G PG G G K
Sbjct: 494 GQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSK 544
Score = 127 bits (319), Expect = 2e-29
Identities = 77/185 (41%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 190 PRQRRPTGPAGPPGQTGPPGP---AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P + G G PG GPPGP +GPPG+ G G+ G G G PG GPPG +G PG+
Sbjct: 1112 PGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQ 1171
Query: 247 MGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL-------- 298
G PGP G G G PG P G P GD L + L
Sbjct: 1172 DGIPGPAGQKGEPGQPGFGNPGPPGL-----PGLSGQKGDGGLPGIPGNPGLPGPKGEPG 1226
Query: 299 ----AGVPGPRGPPGPPGP--------PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGV 346
GV GP GPPG PGP PGP+GPPG PG G QGL G G G G G+
Sbjct: 1227 FHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGI 1286
Query: 347 KGEEG 351
KGE+G
Sbjct: 1287 KGEKG 1291
Score = 127 bits (318), Expect = 3e-29
Identities = 83/198 (41%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 161 DNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDR 220
D LP TP + LP P P P G +GPPG G PG GP G G
Sbjct: 1102 DPGLPGLPGTPGAKGQPGLP-GFP---GTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHP 1157
Query: 221 GQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPT 280
GQ G G G PG G PGP G GE G+PG G PGP G PG S G L +
Sbjct: 1158 GQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGF-GNPGPPGLPGLSGQKGDGGLPGIP--- 1213
Query: 281 DKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGP--RGP---PGPPGTPGSQGLAGER 335
G+ L + G PG +GPPGPPG PGP GP PGP G PG G G +
Sbjct: 1214 ----GNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQ 1269
Query: 336 GTVGPSGEPGVKGEEGEK 353
G GP G PG+ G G K
Sbjct: 1270 GLPGPEGPPGLPGNGGIK 1287
Score = 125 bits (315), Expect = 6e-29
Identities = 81/186 (43%), Positives = 88/186 (47%), Gaps = 39/186 (20%)
Query: 197 GPAGPPGQTGP--------PGPAGPPG---------SKGDRGQTGEKGPAGPPGLLGPPG 239
GP GPPG GP PGP GPPG KGDRG G GP G GL G PG
Sbjct: 737 GPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPG 796
Query: 240 PRGLPGEMGRPGPPGPP--------GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLAS 291
P+G G G+PGP GPP GP G PG Q L+ + P D G L
Sbjct: 797 PKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI-PGEKGDPGPPGLD- 854
Query: 292 AIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLA------GERGTVGPSGEPG 345
+ G PG RG PG PG PGP GPPG PG PG G + GE G +GP G PG
Sbjct: 855 ------VPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPG 908
Query: 346 VKGEEG 351
G G
Sbjct: 909 PLGIPG 914
Score = 125 bits (315), Expect = 6e-29
Identities = 83/211 (39%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 165 PAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTG 224
P P +P E P P P + PTG G PG GPPG G G KG++G G
Sbjct: 1237 PGPPGSPGPALEG--PKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPG 1294
Query: 225 E---------KGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPS--PNS--PQG 271
+ KG GPPGL G PG GL G G PG PG PG G GPS P S P+G
Sbjct: 1295 QPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEG 1354
Query: 272 ALYSLQPPTDKD-----------NGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPP 320
+ PP GD+ L G+PGP+GP G PGP GP G P
Sbjct: 1355 EPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDP 1414
Query: 321 GPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G G PG G G +G G G+PG +G +G
Sbjct: 1415 GRNGLPGFDGAGGRKGDPGLPGQPGTRGLDG 1445
Score = 125 bits (314), Expect = 8e-29
Identities = 77/185 (41%), Positives = 88/185 (47%), Gaps = 26/185 (14%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P P G G PG G PG +G PG G G G G G PGL+GPPG +G G+MG
Sbjct: 974 IPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMG 1033
Query: 249 RPGPPG---PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
PGP G PPGP+G PG P SP P D GD ++S L G+PGP+
Sbjct: 1034 FPGPQGVEGPPGPSGVPG-QPGSPG------LPGQKGDKGDPGISSI----GLPGLPGPK 1082
Query: 306 GPPGPPG------------PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PG PG PG G PG PG G GL G GT GP G G+ G G
Sbjct: 1083 GEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNP 1142
Query: 354 AATAE 358
E
Sbjct: 1143 GLPGE 1147
Score = 125 bits (313), Expect = 1e-28
Identities = 72/168 (42%), Positives = 81/168 (48%), Gaps = 36/168 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP---- 252
G G PG G PGP G PG G +G+ G G G PGL GPPGP G+PG G PG
Sbjct: 105 GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMS 164
Query: 253 --PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PGP G G PGP + L PT G+PGP GPPGP
Sbjct: 165 SLPGPKGNPGYPGPP------GIQGLPGPT-------------------GIPGPIGPPGP 199
Query: 311 PGPPGPRGPPGPPGTPGSQGL-----AGERGTVGPSGEPGVKGEEGEK 353
PG GP GPPG PG G+ GL GE+G G G PG G+ E+
Sbjct: 200 PGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQ 247
Score = 124 bits (312), Expect = 1e-28
Identities = 83/203 (40%), Positives = 94/203 (46%), Gaps = 33/203 (16%)
Query: 184 PLAHPVPRQRRPTG---PAGPPGQTGP------PGPAGPPGSKGDRGQTGEKG------- 227
P P P P G P GPPG+ GP PGP GPPG G+ G GEKG
Sbjct: 1239 PPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGL 1298
Query: 228 --------PAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPS--PNS--PQGALYS 275
GPPGL G PG GL G G PG PG PG G GPS P S P+G
Sbjct: 1299 PGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGL 1358
Query: 276 LQPPTDKDNGDSRLASAIVD-----TVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQG 330
+ PP S I+ + G PG +G PGP GP G GP GPPG PG G
Sbjct: 1359 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNG 1418
Query: 331 LAGERGTVGPSGEPGVKGEEGEK 353
L G G G G+PG+ G+ G +
Sbjct: 1419 LPGFDGAGGRKGDPGLPGQPGTR 1441
Score = 124 bits (311), Expect = 2e-28
Identities = 94/235 (40%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 161 DNDLPAPESTPPTWNEDFLPDAIPLAHPVPR-QRRPTGPAGPPG-----QTGPPGPAGPP 214
D P P P D LP P P Q P GP G PG GPPG GP
Sbjct: 776 DRGFPGPPGPPGRTGLDGLPG--PKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPI 833
Query: 215 GSKGDRGQTGEKGPAGPPGL--LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNS---- 268
G G G GEKG GPPGL GPPG RG PG G PGP GPPG G PG + S
Sbjct: 834 GQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
Query: 269 PQGALYSLQPPTDKDN----GDSRLASAIVDTVLAGVPGPRGP---------PGPPGPPG 315
+G + + PP G S + D L G PG GP PG PGPPG
Sbjct: 894 TKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPG 953
Query: 316 P-----------RGPPGPPGTPGS------QGLAGERGTVGPSGEPGVKGEEGEK 353
P +G PG PG PG QGL G+ G G SG+PG+ G G K
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPK 1008
Score = 123 bits (309), Expect = 3e-28
Identities = 82/198 (41%), Positives = 94/198 (47%), Gaps = 46/198 (23%)
Query: 190 PRQRRPTGPAGPPGQT----GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P Q GP G PGQT G PG G PG GD G G+ G G PGL G PG +G PG
Sbjct: 643 PGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPG 702
Query: 246 --EMGRPGPPGPPGPAGNPGP--SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+G PGPPGP G G PGP +P +P G + PP G
Sbjct: 703 IPGIGLPGPPGPKGFPGIPGPPGAPGTP-GRIGLEGPPGPP-----------------GF 744
Query: 302 PGPRGPPG-----PPGPPG---------PRG------PPGPPGTPGSQGLAGERGTVGPS 341
PGP+G PG PPGPPG P+G PPGPPG G GL G +G VGP+
Sbjct: 745 PGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 342 GEPGVKGEEGEKAATAEG 359
G+PG G G +G
Sbjct: 805 GQPGPMGPPGLPGIGVQG 822
Score = 123 bits (309), Expect = 3e-28
Identities = 73/177 (41%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP------GEMGRP 250
GP GPPG G PG AG G G +G+ G GP GPPG LG PG G+P G G+P
Sbjct: 872 GPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQP 931
Query: 251 GPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR---- 305
G PGP G G+ G P P G + + + G+ L + GV GP+
Sbjct: 932 GLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPG------IPGVSGPKGYQG 985
Query: 306 -----------GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G PG PGPPGP+G PG PG PG G G +GT+G G PG +G EG
Sbjct: 986 LPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEG 1042
Score = 122 bits (307), Expect = 5e-28
Identities = 79/178 (44%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 195 PTGPAGPPGQTG---PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
P G G PG+ G PPGP G PG KG+ G GP GPPGL G G G G+ G PG
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPGFPGPKGEPG-FALPGPPGPPGLPGFKGALGPKGDRGFPG 781
Query: 252 PPGPPGPAGNPG-PSPN---SPQGALYSLQPP------TDKDNGDSRLASAIVDTVLAGV 301
PPGPPG G G P P P G + PP G + I L G+
Sbjct: 782 PPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI 841
Query: 302 PGPRGPPGP-----PGPPGPRGPPGPPGTP---GSQGLAGERGTVGPSGEPGVKGEEG 351
PG +G PGP PGPPG RG PG PG P G G G G G SG PG KGE G
Sbjct: 842 PGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMG 899
Score = 122 bits (306), Expect = 6e-28
Identities = 73/172 (42%), Positives = 88/172 (51%), Gaps = 26/172 (15%)
Query: 197 GPAGPPGQTGPPGP-AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPP-- 253
GP GPPG GPPGP G G KG++G+ G++G G G G PG GLPG+ G PG P
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 254 ----------GPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GPPGP G P P + T + G+ L + G PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGT---------GITIGEKGNIGLPGLPGEKGERGFPG 377
Query: 304 PRGPPGPPGPPGP--RGPPGPPGTPGSQGLAGERGTVGPS--GEPGVKGEEG 351
+GPPG PGPPG GPPGPPG PG +G G+ G G S G PG+ G+ G
Sbjct: 378 IQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPG 429
Score = 122 bits (305), Expect = 8e-28
Identities = 73/182 (40%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 197 GPAGPPGQTGPPGPAGPPGS---KGDRGQTGEKGPAGPPGLLGPPGP-----------RG 242
G G G G PGP G PG KG+RG G G G PG +GP GP +G
Sbjct: 576 GTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKG 635
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
+ G G PG PG PGP G+PG + P P D D G L G+P
Sbjct: 636 IQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIP 695
Query: 303 GPRGPP-----GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
G +G P G PGPPGP+G PG PG PG+ G G G GP G PG G +GE
Sbjct: 696 GSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFAL 755
Query: 358 EG 359
G
Sbjct: 756 PG 757
Score = 121 bits (304), Expect = 1e-27
Identities = 80/182 (43%), Positives = 88/182 (48%), Gaps = 36/182 (19%)
Query: 196 TGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGP 255
TG +GPPGQ G PG GPPGS G GQ GEKG A G GP+GLPG G PG PG
Sbjct: 487 TGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQA------GATGPKGLPGIPGAPGAPGF 540
Query: 256 PGPAGNPG-----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP------ 304
PG G PG P +G L S P G L L G+PGP
Sbjct: 541 PGSKGEPGDILTFPGMKGDKGELGSPGAP-----GLPGLPGTPGQDGLPGLPGPKGEPGG 595
Query: 305 ------RGPPGPPGPP------GPRGPP--GPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
RGPPG PG P GP GPP GPPG G +G+ G G G G PG KG+
Sbjct: 596 ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDP 655
Query: 351 GE 352
G+
Sbjct: 656 GQ 657
Score = 119 bits (297), Expect = 7e-27
Identities = 80/209 (38%), Positives = 93/209 (44%), Gaps = 55/209 (26%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL-------------- 235
P + G G PG G PG G PG G++GQ G+ GP GPPGL+
Sbjct: 300 PGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKG 359
Query: 236 --------GPPGPRGLPGEMGRPGPPGPPGPA--GNPGPSPNSP--QGALYSLQPPTDKD 283
G G RG PG G PG PGPPG A G PGP P P +G PP
Sbjct: 360 NIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGP-PGFPGERGQKGDEGPPGISI 418
Query: 284 NGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPR----------GPPGPPGTPGSQGLAG 333
G L G PG G PGPPGP GP GPPGPPG+PG +GL G
Sbjct: 419 PGPPG---------LDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQG 469
Query: 334 ERGTVGPSGEPGVKGEEGEKAATAEGEGV 362
E+ GVKG++G+ G G+
Sbjct: 470 EQ---------GVKGDKGDTCFNCIGTGI 489
Score = 119 bits (297), Expect = 7e-27
Identities = 77/185 (41%), Positives = 84/185 (45%), Gaps = 29/185 (15%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP---------RGLPGEM 247
G G PG G PG G PG+ G G G GP G PGL G PGP G PGE
Sbjct: 1107 GLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEK 1166
Query: 248 GRPGPPGPPGPA-----------GNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDT 296
G+PG G PGPA GNPGP P P + G+ L +
Sbjct: 1167 GKPGQDGIPGPAGQKGEPGQPGFGNPGP-PGLPGLSGQKGDGGLPGIPGNPGLPGPKGEP 1225
Query: 297 VLAGVPGPRGPPGPPGPPGPR--------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
G PG +GPPGPPG PGP GP GPPG PG G G G GP G PG G
Sbjct: 1226 GFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGG 1285
Query: 349 EEGEK 353
+GEK
Sbjct: 1286 IKGEK 1290
Score = 117 bits (294), Expect = 2e-26
Identities = 82/191 (42%), Positives = 89/191 (46%), Gaps = 42/191 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRG---------QTGEKGPAGPPGLLGPPGPR-----G 242
GP GPPG G PG +G PG KGD G TGEKG G PGL GPPGP G
Sbjct: 902 GPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLG 961
Query: 243 LPGEMGRPGPPGPPGPAGNPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
GE G PG PG PG +G G P P S QP G + L G
Sbjct: 962 SKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG------NPGLPG 1015
Query: 301 VPGPRGPPGP---------PGPPGPRGPPGP---PGTPGSQGLAGERG--------TVGP 340
PG GPPG PGP G GPPGP PG PGS GL G++G ++G
Sbjct: 1016 QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGL 1075
Query: 341 SGEPGVKGEEG 351
G PG KGE G
Sbjct: 1076 PGLPGPKGEPG 1086
Score = 116 bits (290), Expect = 5e-26
Identities = 79/198 (39%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 157 PSSPDNDLPAPESTPPTWNE--DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPP 214
P P P P P + D IP +P + G G PG GPPGP G P
Sbjct: 1184 PGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP 1243
Query: 215 GSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALY 274
G + G G GP GPPG GP G +GLPG GPPG PG G G N Q L
Sbjct: 1244 GPALE-GPKGNPGPQGPPGRPGPTGFQGLPGP---EGPPGLPGNGGIKGEKGNPGQPGLP 1299
Query: 275 SLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGE 334
L P D G L + G+ G +G PG PG PG G GP G PGS G GE
Sbjct: 1300 GL-PGLKGDQGPPGLQG---NPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGE 1355
Query: 335 RGTVGPSGEPGVKGEEGE 352
G +GP G PG+ G G+
Sbjct: 1356 PGLIGPPGPPGLPGPSGQ 1373
Score = 111 bits (277), Expect = 1e-24
Identities = 69/176 (39%), Positives = 76/176 (43%), Gaps = 40/176 (22%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP----GP 252
G G G G PG G PG KG G G GP G PGL+GPPGP GLPG G+ G
Sbjct: 1321 GLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGD 1380
Query: 253 PGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
GPPG G PG P P PQG +PGP GPP
Sbjct: 1381 AGPPGIPGQPGLKGLPGPQGPQG-----------------------------LPGPTGPP 1411
Query: 309 GPPGP---PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEG 361
G PG PG G G G PG G G RG GP G G++G G ++ G
Sbjct: 1412 GDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHG 1467
Score = 108 bits (269), Expect = 1e-23
Identities = 76/206 (36%), Positives = 90/206 (43%), Gaps = 47/206 (22%)
Query: 192 QRRPTGPAGPPG-------------QTGPPGPAGPPGSKGDRG------QTGEKGPAGPP 232
Q+ TGP GPPG + G G G PG KG+RG G GP G
Sbjct: 332 QKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPG-A 390
Query: 233 GLLGPPGPRGLPGEMGRPGP--------PGPPGPAGNPG-PSPNSPQGALYSLQPPTDK- 282
++GPPGP G PGE G+ G PGPPG G PG P P G PP+D+
Sbjct: 391 AVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEI 450
Query: 283 -DNGDSRLASAIVDTVLAGVPGPR----------------GPPGPPGPPGPRGPPGPPGT 325
+ G + D L G G + GPPG PG PG GPPG G
Sbjct: 451 CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGF 510
Query: 326 PGSQGLAGERGTVGPSGEPGVKGEEG 351
PG +G G+ G GP G PG+ G G
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPG 536
Score = 105 bits (261), Expect = 1e-22
Identities = 71/193 (36%), Positives = 81/193 (41%), Gaps = 43/193 (22%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP----- 244
P Q G GPPG G PG KG++GQ G GP G PG+ G PG G P
Sbjct: 493 PGQPGLPGLPGPPGS------LGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Query: 245 --------------GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLA 290
GE+G PG PG PG G PG Q L L P + G
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAPGLPGLPGTPG------QDGLPGLPGPKGEPGG----- 595
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPP--GTPGSQGLAGERGTVGPSGEPGVKG 348
G GP G PG PG PG GP GPP G PG G G +G G G+PG+ G
Sbjct: 596 -----ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPG 650
Query: 349 EEGEKAATAEGEG 361
+G+ T G
Sbjct: 651 PKGDPGQTITQPG 663
Score = 103 bits (257), Expect = 3e-22
Identities = 71/174 (40%), Positives = 74/174 (42%), Gaps = 12/174 (6%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G GP G+ G PG G PG KG G G G G PG G PG G PG G PGP G
Sbjct: 1077 GLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136
Query: 257 GPAGNPG----PSPNSPQGALYSLQPPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPP 311
GP GNPG P P G PP +K G + G PG G PGPP
Sbjct: 1137 GPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPG-FGNPGPP 1195
Query: 312 GPPGPRGP------PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
G PG G PG PG PG G GE G G G G G G EG
Sbjct: 1196 GLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEG 1249
Score = 73.6 bits (179), Expect = 3e-13
Identities = 49/124 (39%), Positives = 52/124 (41%), Gaps = 17/124 (13%)
Query: 164 LPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQT 223
LP P D P IP P + GP GP G GP GP G PG G G
Sbjct: 1367 LPGPSGQSIIIKGDAGPPGIP---GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD 1423
Query: 224 GEKGPAGPPGLLGPPGPRGL---PGEMGRPGPPGPPGPA-----------GNPGPSPNSP 269
G G G PGL G PG RGL PG G GPPGPPG + +P P
Sbjct: 1424 GAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCP 1483
Query: 270 QGAL 273
QG L
Sbjct: 1484 QGTL 1487
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 139 bits (349), Expect = 7e-33
Identities = 84/193 (43%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQ---------TGEKGPAG 230
P IP + +R G G PG GPPGP G PG KG+ G G G G
Sbjct: 118 PQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPG 177
Query: 231 PPGLLGPPGPRGLPGEMGRPGPP---GPPGPAGNPGPSPN------SPQG--ALYSLQPP 279
PPG+ G PGP G+PG +G PGPP GPPGP G PGP N P+G LQ P
Sbjct: 178 PPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP 237
Query: 280 TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
S I G G G GPPGPPG RGPPGPPG G +G GE+G G
Sbjct: 238 PGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPG--GEKGEKGEQGEPG 295
Query: 340 PSGEPGVKGEEGE 352
G+PG GE G+
Sbjct: 296 KRGKPGKDGENGQ 308
Score = 135 bits (339), Expect = 1e-31
Identities = 85/224 (37%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 165 PAPESTP-PTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGP------PGSK 217
P P P P F P +P + GP G G GPPGP G PG K
Sbjct: 739 PGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPK 798
Query: 218 GDRGQTGEKGPAGPPGL-----LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGA 272
GD G G+ GP GPPGL GPPGP G+PG +G+PG G PG G+PGP G
Sbjct: 799 GDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPG- 857
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPP------------------ 314
PP ++ + + G PGP GPPG PG P
Sbjct: 858 -----PPGERGSPG-----------IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMM 901
Query: 315 GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
GP GPPGP G PG G+ G +G G G+PG+ G GEK + E
Sbjct: 902 GPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGE 945
Score = 132 bits (333), Expect = 5e-31
Identities = 74/174 (42%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPP--- 253
G G PG G PGP GPPG +G +G G GP GP G+ GPPG G PG G PG P
Sbjct: 54 GLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHD 113
Query: 254 GPPGPAGNPGPS--------PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
G PGP G PG + P SP LQ P G + +++ +PGP+
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSP--GFPGLQGPPGPP-GIPGMKGEPGSIIMSSLPGPK 170
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
G PG PGPPG +G PGP G PG G G G +GP G PG+ G +G +G
Sbjct: 171 GNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQG 224
Score = 130 bits (327), Expect = 2e-30
Identities = 73/168 (43%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P + P G G PGQ GPPG G PG G G G+KG G PG G PGP GLPG G
Sbjct: 1144 LPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGF-GNPGPPGLPGLSG 1202
Query: 249 RPGPPGPPGPAGNPG-PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
+ G G PG GNPG P P G +Q P L G G
Sbjct: 1203 QKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPG--------PALEGPKGNP 1254
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
GP GPPG PG GP GPPG PG+ G+ GE+G G G PG+ G +G++
Sbjct: 1255 GPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQ 1302
Score = 130 bits (326), Expect = 3e-30
Identities = 75/171 (43%), Positives = 88/171 (51%), Gaps = 20/171 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP G PG G PG GPPG KG G+ G GP G+ GPPGP G+PG+ G PG PG
Sbjct: 1004 PPGPKGNPGLPGQPGLIGPPGLKGT---IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPG 1060
Query: 255 PPGPAGNPG------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
G G+PG P P+G +P G+ + ++ D L G+PG G
Sbjct: 1061 QKGDKGDPGISSIGLPGLPGPKG-----EPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAK 1115
Query: 309 GPPGPPGPRGPPGPP------GTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PG PG G PGPP G PG+ GL GE G VG G PG G GEK
Sbjct: 1116 GQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEK 1166
Score = 129 bits (323), Expect = 7e-30
Identities = 74/175 (42%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 190 PRQRRPTGPAGPPGQTGPPGP---AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P + G G PG GPPGP +GPPG+ G G+ G G G PG GPPG +G PG+
Sbjct: 1112 PGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQ 1171
Query: 247 MGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRG 306
G PGP G G G PG P G P GD L + G+PGP+G
Sbjct: 1172 DGIPGPAGQKGEPGQPGFGNPGPPGL-----PGLSGQKGDGGLPGIPGN---PGLPGPKG 1223
Query: 307 PPGPPGPPGPRGPPGPPGTPGS--QGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
PG G PG +GPPGPPG+PG +G G G GP G PG+ G EG G
Sbjct: 1224 EPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNG 1278
Score = 128 bits (322), Expect = 9e-30
Identities = 82/201 (40%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 184 PLAHPVPRQRRPTG---PAGPPGQTGPPGPAGPPGSKGDRGQTGE--------------- 225
P P P P G P GPPG+ G PGP GPPG G+ G GE
Sbjct: 1239 PPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGL 1298
Query: 226 KGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPS--PNS--PQGALYSLQPPTD 281
KG GPPGL G PG GL G G PG PG PG G GPS P S P+G + PP
Sbjct: 1299 KGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGP 1358
Query: 282 KD-----------NGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQG 330
GD+ L G+PGP+GP G PGP GP G PG G PG G
Sbjct: 1359 PGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDG 1418
Query: 331 LAGERGTVGPSGEPGVKGEEG 351
G +G G G+PG +G +G
Sbjct: 1419 AGGRKGDPGLPGQPGTRGLDG 1439
Score = 128 bits (321), Expect = 1e-29
Identities = 76/171 (44%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Query: 197 GPAGPPGQTGPPGPA--GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G GPPG GPPG A GPPG G G+ G+KG GPPG+ PGP GL G+ G PG PG
Sbjct: 377 GIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGI-SIPGPPGLDGQPGAPGLPG 435
Query: 255 PPGPAG----------NPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
PPGPAG PGP P SP + D GD+ + T ++G P
Sbjct: 436 PPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDT--CFNCIGTGISGPP 493
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G G PG PGPPG G PG G G G G +G G G PG G G K
Sbjct: 494 GQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSK 544
Score = 125 bits (315), Expect = 6e-29
Identities = 81/186 (43%), Positives = 88/186 (47%), Gaps = 39/186 (20%)
Query: 197 GPAGPPGQTGP--------PGPAGPPG---------SKGDRGQTGEKGPAGPPGLLGPPG 239
GP GPPG GP PGP GPPG KGDRG G GP G GL G PG
Sbjct: 737 GPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPG 796
Query: 240 PRGLPGEMGRPGPPGPP--------GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLAS 291
P+G G G+PGP GPP GP G PG Q L+ + P D G L
Sbjct: 797 PKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI-PGEKGDPGPPGLD- 854
Query: 292 AIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLA------GERGTVGPSGEPG 345
+ G PG RG PG PG PGP GPPG PG PG G + GE G +GP G PG
Sbjct: 855 ------VPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPG 908
Query: 346 VKGEEG 351
G G
Sbjct: 909 PLGIPG 914
Score = 125 bits (314), Expect = 8e-29
Identities = 77/185 (41%), Positives = 88/185 (47%), Gaps = 26/185 (14%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P P G G PG G PG +G PG G G G G G PGL+GPPG +G G+MG
Sbjct: 974 IPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMG 1033
Query: 249 RPGPPG---PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
PGP G PPGP+G PG P SP P D GD ++S L G+PGP+
Sbjct: 1034 FPGPQGVEGPPGPSGVPG-QPGSPG------LPGQKGDKGDPGISSI----GLPGLPGPK 1082
Query: 306 GPPGPPG------------PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PG PG PG G PG PG G GL G GT GP G G+ G G
Sbjct: 1083 GEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNP 1142
Query: 354 AATAE 358
E
Sbjct: 1143 GLPGE 1147
Score = 125 bits (313), Expect = 1e-28
Identities = 72/168 (42%), Positives = 81/168 (48%), Gaps = 36/168 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP---- 252
G G PG G PGP G PG G +G+ G G G PGL GPPGP G+PG G PG
Sbjct: 105 GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMS 164
Query: 253 --PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PGP G G PGP + L PT G+PGP GPPGP
Sbjct: 165 SLPGPKGNPGYPGPP------GIQGLPGPT-------------------GIPGPIGPPGP 199
Query: 311 PGPPGPRGPPGPPGTPGSQGL-----AGERGTVGPSGEPGVKGEEGEK 353
PG GP GPPG PG G+ GL GE+G G G PG G+ E+
Sbjct: 200 PGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQ 247
Score = 124 bits (311), Expect = 2e-28
Identities = 94/235 (40%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 161 DNDLPAPESTPPTWNEDFLPDAIPLAHPVPR-QRRPTGPAGPPG-----QTGPPGPAGPP 214
D P P P D LP P P Q P GP G PG GPPG GP
Sbjct: 776 DRGFPGPPGPPGRTGLDGLPG--PKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPI 833
Query: 215 GSKGDRGQTGEKGPAGPPGL--LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNS---- 268
G G G GEKG GPPGL GPPG RG PG G PGP GPPG G PG + S
Sbjct: 834 GQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
Query: 269 PQGALYSLQPPTDKDN----GDSRLASAIVDTVLAGVPGPRGP---------PGPPGPPG 315
+G + + PP G S + D L G PG GP PG PGPPG
Sbjct: 894 TKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPG 953
Query: 316 P-----------RGPPGPPGTPGS------QGLAGERGTVGPSGEPGVKGEEGEK 353
P +G PG PG PG QGL G+ G G SG+PG+ G G K
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPK 1008
Score = 123 bits (309), Expect = 3e-28
Identities = 82/198 (41%), Positives = 94/198 (47%), Gaps = 46/198 (23%)
Query: 190 PRQRRPTGPAGPPGQT----GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P Q GP G PGQT G PG G PG GD G G+ G G PGL G PG +G PG
Sbjct: 643 PGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPG 702
Query: 246 --EMGRPGPPGPPGPAGNPGP--SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+G PGPPGP G G PGP +P +P G + PP G
Sbjct: 703 IPGIGLPGPPGPKGFPGIPGPPGAPGTP-GRIGLEGPPGPP-----------------GF 744
Query: 302 PGPRGPPG-----PPGPPG---------PRG------PPGPPGTPGSQGLAGERGTVGPS 341
PGP+G PG PPGPPG P+G PPGPPG G GL G +G VGP+
Sbjct: 745 PGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 342 GEPGVKGEEGEKAATAEG 359
G+PG G G +G
Sbjct: 805 GQPGPMGPPGLPGIGVQG 822
Score = 123 bits (309), Expect = 3e-28
Identities = 73/177 (41%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP------GEMGRP 250
GP GPPG G PG AG G G +G+ G GP GPPG LG PG G+P G G+P
Sbjct: 872 GPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQP 931
Query: 251 GPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR---- 305
G PGP G G+ G P P G + + + G+ L + GV GP+
Sbjct: 932 GLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPG------IPGVSGPKGYQG 985
Query: 306 -----------GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G PG PGPPGP+G PG PG PG G G +GT+G G PG +G EG
Sbjct: 986 LPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEG 1042
Score = 122 bits (307), Expect = 5e-28
Identities = 79/178 (44%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 195 PTGPAGPPGQTG---PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
P G G PG+ G PPGP G PG KG+ G GP GPPGL G G G G+ G PG
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPGFPGPKGEPG-FALPGPPGPPGLPGFKGALGPKGDRGFPG 781
Query: 252 PPGPPGPAGNPG-PSPN---SPQGALYSLQPP------TDKDNGDSRLASAIVDTVLAGV 301
PPGPPG G G P P P G + PP G + I L G+
Sbjct: 782 PPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI 841
Query: 302 PGPRGPPGP-----PGPPGPRGPPGPPGTP---GSQGLAGERGTVGPSGEPGVKGEEG 351
PG +G PGP PGPPG RG PG PG P G G G G G SG PG KGE G
Sbjct: 842 PGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMG 899
Score = 122 bits (306), Expect = 6e-28
Identities = 73/172 (42%), Positives = 88/172 (51%), Gaps = 26/172 (15%)
Query: 197 GPAGPPGQTGPPGP-AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPP-- 253
GP GPPG GPPGP G G KG++G+ G++G G G G PG GLPG+ G PG P
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 254 ----------GPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GPPGP G P P + T + G+ L + G PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGT---------GITIGEKGNIGLPGLPGEKGERGFPG 377
Query: 304 PRGPPGPPGPPGP--RGPPGPPGTPGSQGLAGERGTVGPS--GEPGVKGEEG 351
+GPPG PGPPG GPPGPPG PG +G G+ G G S G PG+ G+ G
Sbjct: 378 IQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPG 429
Score = 122 bits (305), Expect = 8e-28
Identities = 73/182 (40%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 197 GPAGPPGQTGPPGPAGPPGS---KGDRGQTGEKGPAGPPGLLGPPGP-----------RG 242
G G G G PGP G PG KG+RG G G G PG +GP GP +G
Sbjct: 576 GTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKG 635
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
+ G G PG PG PGP G+PG + P P D D G L G+P
Sbjct: 636 IQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIP 695
Query: 303 GPRGPP-----GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
G +G P G PGPPGP+G PG PG PG+ G G G GP G PG G +GE
Sbjct: 696 GSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFAL 755
Query: 358 EG 359
G
Sbjct: 756 PG 757
Score = 121 bits (304), Expect = 1e-27
Identities = 80/182 (43%), Positives = 88/182 (48%), Gaps = 36/182 (19%)
Query: 196 TGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGP 255
TG +GPPGQ G PG GPPGS G GQ GEKG A G GP+GLPG G PG PG
Sbjct: 487 TGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQA------GATGPKGLPGIPGAPGAPGF 540
Query: 256 PGPAGNPG-----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP------ 304
PG G PG P +G L S P G L L G+PGP
Sbjct: 541 PGSKGEPGDILTFPGMKGDKGELGSPGAP-----GLPGLPGTPGQDGLPGLPGPKGEPGG 595
Query: 305 ------RGPPGPPGPP------GPRGPP--GPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
RGPPG PG P GP GPP GPPG G +G+ G G G G PG KG+
Sbjct: 596 ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDP 655
Query: 351 GE 352
G+
Sbjct: 656 GQ 657
Score = 120 bits (301), Expect = 2e-27
Identities = 87/214 (40%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 157 PSSPDNDLPAPESTPPTWNE--DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPP 214
P P P P P + D IP +P + G G PG GPPGP G P
Sbjct: 1184 PGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP 1243
Query: 215 GS--KGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQG 271
G +G +G G +GP G PGL GP GP GLPG G G G PG G PG P QG
Sbjct: 1244 GPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQG 1303
Query: 272 ALYSLQPPTDKDN-GDSRLASAIVDTVLAGVP------GPRGPP---GPPGPPGPRGPPG 321
PP + N G L D L GVP GP G P GP G PG GPPG
Sbjct: 1304 ------PPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPG 1357
Query: 322 PPGTPGSQG----LAGERGTVGPSGEPGVKGEEG 351
PPG PG G + G+ G G G+PG+KG G
Sbjct: 1358 PPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPG 1391
Score = 119 bits (297), Expect = 7e-27
Identities = 80/209 (38%), Positives = 93/209 (44%), Gaps = 55/209 (26%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL-------------- 235
P + G G PG G PG G PG G++GQ G+ GP GPPGL+
Sbjct: 300 PGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKG 359
Query: 236 --------GPPGPRGLPGEMGRPGPPGPPGPA--GNPGPSPNSP--QGALYSLQPPTDKD 283
G G RG PG G PG PGPPG A G PGP P P +G PP
Sbjct: 360 NIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGP-PGFPGERGQKGDEGPPGISI 418
Query: 284 NGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPR----------GPPGPPGTPGSQGLAG 333
G L G PG G PGPPGP GP GPPGPPG+PG +GL G
Sbjct: 419 PGPPG---------LDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQG 469
Query: 334 ERGTVGPSGEPGVKGEEGEKAATAEGEGV 362
E+ GVKG++G+ G G+
Sbjct: 470 EQ---------GVKGDKGDTCFNCIGTGI 489
Score = 117 bits (294), Expect = 2e-26
Identities = 82/191 (42%), Positives = 89/191 (46%), Gaps = 42/191 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRG---------QTGEKGPAGPPGLLGPPGPR-----G 242
GP GPPG G PG +G PG KGD G TGEKG G PGL GPPGP G
Sbjct: 902 GPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLG 961
Query: 243 LPGEMGRPGPPGPPGPAGNPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
GE G PG PG PG +G G P P S QP G + L G
Sbjct: 962 SKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG------NPGLPG 1015
Query: 301 VPGPRGPPGP---------PGPPGPRGPPGP---PGTPGSQGLAGERG--------TVGP 340
PG GPPG PGP G GPPGP PG PGS GL G++G ++G
Sbjct: 1016 QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGL 1075
Query: 341 SGEPGVKGEEG 351
G PG KGE G
Sbjct: 1076 PGLPGPKGEPG 1086
Score = 108 bits (269), Expect = 1e-23
Identities = 76/206 (36%), Positives = 90/206 (43%), Gaps = 47/206 (22%)
Query: 192 QRRPTGPAGPPG-------------QTGPPGPAGPPGSKGDRG------QTGEKGPAGPP 232
Q+ TGP GPPG + G G G PG KG+RG G GP G
Sbjct: 332 QKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPG-A 390
Query: 233 GLLGPPGPRGLPGEMGRPGP--------PGPPGPAGNPG-PSPNSPQGALYSLQPPTDK- 282
++GPPGP G PGE G+ G PGPPG G PG P P G PP+D+
Sbjct: 391 AVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEI 450
Query: 283 -DNGDSRLASAIVDTVLAGVPGPR----------------GPPGPPGPPGPRGPPGPPGT 325
+ G + D L G G + GPPG PG PG GPPG G
Sbjct: 451 CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGF 510
Query: 326 PGSQGLAGERGTVGPSGEPGVKGEEG 351
PG +G G+ G GP G PG+ G G
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPG 536
Score = 105 bits (261), Expect = 1e-22
Identities = 71/193 (36%), Positives = 81/193 (41%), Gaps = 43/193 (22%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP----- 244
P Q G GPPG G PG KG++GQ G GP G PG+ G PG G P
Sbjct: 493 PGQPGLPGLPGPPGS------LGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Query: 245 --------------GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLA 290
GE+G PG PG PG G PG Q L L P + G
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAPGLPGLPGTPG------QDGLPGLPGPKGEPGG----- 595
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPP--GTPGSQGLAGERGTVGPSGEPGVKG 348
G GP G PG PG PG GP GPP G PG G G +G G G+PG+ G
Sbjct: 596 -----ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPG 650
Query: 349 EEGEKAATAEGEG 361
+G+ T G
Sbjct: 651 PKGDPGQTITQPG 663
Score = 73.6 bits (179), Expect = 3e-13
Identities = 49/124 (39%), Positives = 52/124 (41%), Gaps = 17/124 (13%)
Query: 164 LPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQT 223
LP P D P IP P + GP GP G GP GP G PG G G
Sbjct: 1361 LPGPSGQSIIIKGDAGPPGIP---GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD 1417
Query: 224 GEKGPAGPPGLLGPPGPRGL---PGEMGRPGPPGPPGPA-----------GNPGPSPNSP 269
G G G PGL G PG RGL PG G GPPGPPG + +P P
Sbjct: 1418 GAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCP 1477
Query: 270 QGAL 273
QG L
Sbjct: 1478 QGTL 1481
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 139 bits (349), Expect = 7e-33
Identities = 84/193 (43%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQ---------TGEKGPAG 230
P IP + +R G G PG GPPGP G PG KG+ G G G G
Sbjct: 118 PQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPG 177
Query: 231 PPGLLGPPGPRGLPGEMGRPGPP---GPPGPAGNPGPSPN------SPQG--ALYSLQPP 279
PPG+ G PGP G+PG +G PGPP GPPGP G PGP N P+G LQ P
Sbjct: 178 PPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP 237
Query: 280 TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVG 339
S I G G G GPPGPPG RGPPGPPG G +G GE+G G
Sbjct: 238 PGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPG--GEKGEKGEQGEPG 295
Query: 340 PSGEPGVKGEEGE 352
G+PG GE G+
Sbjct: 296 KRGKPGKDGENGQ 308
Score = 135 bits (339), Expect = 1e-31
Identities = 85/224 (37%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 165 PAPESTP-PTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGP------PGSK 217
P P P P F P +P + GP G G GPPGP G PG K
Sbjct: 739 PGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPK 798
Query: 218 GDRGQTGEKGPAGPPGL-----LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGA 272
GD G G+ GP GPPGL GPPGP G+PG +G+PG G PG G+PGP G
Sbjct: 799 GDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPG- 857
Query: 273 LYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPP------------------ 314
PP ++ + + G PGP GPPG PG P
Sbjct: 858 -----PPGERGSPG-----------IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMM 901
Query: 315 GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
GP GPPGP G PG G+ G +G G G+PG+ G GEK + E
Sbjct: 902 GPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGE 945
Score = 132 bits (333), Expect = 5e-31
Identities = 74/174 (42%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPP--- 253
G G PG G PGP GPPG +G +G G GP GP G+ GPPG G PG G PG P
Sbjct: 54 GLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHD 113
Query: 254 GPPGPAGNPGPS--------PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
G PGP G PG + P SP LQ P G + +++ +PGP+
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSP--GFPGLQGPPGPP-GIPGMKGEPGSIIMSSLPGPK 170
Query: 306 GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
G PG PGPPG +G PGP G PG G G G +GP G PG+ G +G +G
Sbjct: 171 GNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQG 224
Score = 132 bits (332), Expect = 6e-31
Identities = 75/178 (42%), Positives = 89/178 (50%), Gaps = 29/178 (16%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P + P G G PGQ GPPG G PG G G G+KG G PG G PGP GLPG G
Sbjct: 1144 LPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGF-GNPGPPGLPGLSG 1202
Query: 249 R---------PGPPGPPGPAGNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVD 295
+ PG PG PGP G PG P P G S P + G+
Sbjct: 1203 QKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGN--------- 1253
Query: 296 TVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
PGP+GPPG PG G GP GPPG PG+ G+ GE+G G G PG+ G +G++
Sbjct: 1254 ------PGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQ 1305
Score = 130 bits (326), Expect = 3e-30
Identities = 75/171 (43%), Positives = 88/171 (51%), Gaps = 20/171 (11%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
P GP G PG G PG GPPG KG G+ G GP G+ GPPGP G+PG+ G PG PG
Sbjct: 1004 PPGPKGNPGLPGQPGLIGPPGLKGT---IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPG 1060
Query: 255 PPGPAGNPG------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
G G+PG P P+G +P G+ + ++ D L G+PG G
Sbjct: 1061 QKGDKGDPGISSIGLPGLPGPKG-----EPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAK 1115
Query: 309 GPPGPPGPRGPPGPP------GTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PG PG G PGPP G PG+ GL GE G VG G PG G GEK
Sbjct: 1116 GQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEK 1166
Score = 130 bits (326), Expect = 3e-30
Identities = 77/182 (42%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 190 PRQRRPTGPAGPPGQTGPPGP---AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P + G G PG GPPGP +GPPG+ G G+ G G G PG GPPG +G PG+
Sbjct: 1112 PGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQ 1171
Query: 247 MGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA------- 299
G PGP G G G PG P G P GD L + L
Sbjct: 1172 DGIPGPAGQKGEPGQPGFGNPGPPGL-----PGLSGQKGDGGLPGIPGNPGLPGPKGEPG 1226
Query: 300 --GVPGPRGPPGPPGPPGPR--------GPPGPPGTPGSQGLAGERGTVGPSGEPGVKGE 349
G PG +GPPGPPG PGP GP GPPG PG QGL G G G G G+KGE
Sbjct: 1227 FHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGE 1286
Query: 350 EG 351
+G
Sbjct: 1287 KG 1288
Score = 128 bits (321), Expect = 1e-29
Identities = 76/171 (44%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Query: 197 GPAGPPGQTGPPGPA--GPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPG 254
G GPPG GPPG A GPPG G G+ G+KG GPPG+ PGP GL G+ G PG PG
Sbjct: 377 GIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGI-SIPGPPGLDGQPGAPGLPG 435
Query: 255 PPGPAG----------NPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
PPGPAG PGP P SP + D GD+ + T ++G P
Sbjct: 436 PPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDT--CFNCIGTGISGPP 493
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G G PG PGPPG G PG G G G G +G G G PG G G K
Sbjct: 494 GQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSK 544
Score = 125 bits (315), Expect = 6e-29
Identities = 81/186 (43%), Positives = 88/186 (47%), Gaps = 39/186 (20%)
Query: 197 GPAGPPGQTGP--------PGPAGPPG---------SKGDRGQTGEKGPAGPPGLLGPPG 239
GP GPPG GP PGP GPPG KGDRG G GP G GL G PG
Sbjct: 737 GPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPG 796
Query: 240 PRGLPGEMGRPGPPGPP--------GPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLAS 291
P+G G G+PGP GPP GP G PG Q L+ + P D G L
Sbjct: 797 PKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI-PGEKGDPGPPGLD- 854
Query: 292 AIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLA------GERGTVGPSGEPG 345
+ G PG RG PG PG PGP GPPG PG PG G + GE G +GP G PG
Sbjct: 855 ------VPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPG 908
Query: 346 VKGEEG 351
G G
Sbjct: 909 PLGIPG 914
Score = 125 bits (314), Expect = 8e-29
Identities = 77/185 (41%), Positives = 88/185 (47%), Gaps = 26/185 (14%)
Query: 189 VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG 248
+P P G G PG G PG +G PG G G G G G PGL+GPPG +G G+MG
Sbjct: 974 IPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMG 1033
Query: 249 RPGPPG---PPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
PGP G PPGP+G PG P SP P D GD ++S L G+PGP+
Sbjct: 1034 FPGPQGVEGPPGPSGVPG-QPGSPG------LPGQKGDKGDPGISSI----GLPGLPGPK 1082
Query: 306 GPPGPPG------------PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G PG PG PG G PG PG G GL G GT GP G G+ G G
Sbjct: 1083 GEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNP 1142
Query: 354 AATAE 358
E
Sbjct: 1143 GLPGE 1147
Score = 125 bits (314), Expect = 8e-29
Identities = 78/187 (41%), Positives = 88/187 (47%), Gaps = 30/187 (16%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE---------------KGPAGPPGLLGPPG 239
P GP G PG G PGP GPPG G+ G GE KG GPPGL G PG
Sbjct: 1256 PQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPG 1315
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPGPS--PNS--PQGALYSLQPPTDKD-----------N 284
GL G G PG PG PG G GPS P S P+G + PP
Sbjct: 1316 RPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIK 1375
Query: 285 GDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEP 344
GD+ L G+PGP+GP G PGP GP G PG G PG G G +G G G+P
Sbjct: 1376 GDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQP 1435
Query: 345 GVKGEEG 351
G +G +G
Sbjct: 1436 GTRGLDG 1442
Score = 125 bits (313), Expect = 1e-28
Identities = 72/168 (42%), Positives = 81/168 (48%), Gaps = 36/168 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGP---- 252
G G PG G PGP G PG G +G+ G G G PGL GPPGP G+PG G PG
Sbjct: 105 GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMS 164
Query: 253 --PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
PGP G G PGP + L PT G+PGP GPPGP
Sbjct: 165 SLPGPKGNPGYPGPP------GIQGLPGPT-------------------GIPGPIGPPGP 199
Query: 311 PGPPGPRGPPGPPGTPGSQGL-----AGERGTVGPSGEPGVKGEEGEK 353
PG GP GPPG PG G+ GL GE+G G G PG G+ E+
Sbjct: 200 PGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQ 247
Score = 124 bits (311), Expect = 2e-28
Identities = 94/235 (40%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 161 DNDLPAPESTPPTWNEDFLPDAIPLAHPVPR-QRRPTGPAGPPG-----QTGPPGPAGPP 214
D P P P D LP P P Q P GP G PG GPPG GP
Sbjct: 776 DRGFPGPPGPPGRTGLDGLPG--PKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPI 833
Query: 215 GSKGDRGQTGEKGPAGPPGL--LGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSPNS---- 268
G G G GEKG GPPGL GPPG RG PG G PGP GPPG G PG + S
Sbjct: 834 GQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPG 893
Query: 269 PQGALYSLQPPTDKDN----GDSRLASAIVDTVLAGVPGPRGP---------PGPPGPPG 315
+G + + PP G S + D L G PG GP PG PGPPG
Sbjct: 894 TKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPG 953
Query: 316 P-----------RGPPGPPGTPGS------QGLAGERGTVGPSGEPGVKGEEGEK 353
P +G PG PG PG QGL G+ G G SG+PG+ G G K
Sbjct: 954 PMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPK 1008
Score = 123 bits (309), Expect = 3e-28
Identities = 82/198 (41%), Positives = 94/198 (47%), Gaps = 46/198 (23%)
Query: 190 PRQRRPTGPAGPPGQT----GPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPG 245
P Q GP G PGQT G PG G PG GD G G+ G G PGL G PG +G PG
Sbjct: 643 PGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPG 702
Query: 246 --EMGRPGPPGPPGPAGNPGP--SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGV 301
+G PGPPGP G G PGP +P +P G + PP G
Sbjct: 703 IPGIGLPGPPGPKGFPGIPGPPGAPGTP-GRIGLEGPPGPP-----------------GF 744
Query: 302 PGPRGPPG-----PPGPPG---------PRG------PPGPPGTPGSQGLAGERGTVGPS 341
PGP+G PG PPGPPG P+G PPGPPG G GL G +G VGP+
Sbjct: 745 PGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 342 GEPGVKGEEGEKAATAEG 359
G+PG G G +G
Sbjct: 805 GQPGPMGPPGLPGIGVQG 822
Score = 123 bits (309), Expect = 3e-28
Identities = 73/177 (41%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP------GEMGRP 250
GP GPPG G PG AG G G +G+ G GP GPPG LG PG G+P G G+P
Sbjct: 872 GPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQP 931
Query: 251 GPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR---- 305
G PGP G G+ G P P G + + + G+ L + GV GP+
Sbjct: 932 GLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPG------IPGVSGPKGYQG 985
Query: 306 -----------GPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G PG PGPPGP+G PG PG PG G G +GT+G G PG +G EG
Sbjct: 986 LPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEG 1042
Score = 122 bits (307), Expect = 5e-28
Identities = 79/178 (44%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 195 PTGPAGPPGQTG---PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPG 251
P G G PG+ G PPGP G PG KG+ G GP GPPGL G G G G+ G PG
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPGFPGPKGEPG-FALPGPPGPPGLPGFKGALGPKGDRGFPG 781
Query: 252 PPGPPGPAGNPG-PSPN---SPQGALYSLQPP------TDKDNGDSRLASAIVDTVLAGV 301
PPGPPG G G P P P G + PP G + I L G+
Sbjct: 782 PPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI 841
Query: 302 PGPRGPPGP-----PGPPGPRGPPGPPGTP---GSQGLAGERGTVGPSGEPGVKGEEG 351
PG +G PGP PGPPG RG PG PG P G G G G G SG PG KGE G
Sbjct: 842 PGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMG 899
Score = 122 bits (306), Expect = 6e-28
Identities = 73/172 (42%), Positives = 88/172 (51%), Gaps = 26/172 (15%)
Query: 197 GPAGPPGQTGPPGP-AGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPP-- 253
GP GPPG GPPGP G G KG++G+ G++G G G G PG GLPG+ G PG P
Sbjct: 267 GPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGR 326
Query: 254 ----------GPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPG 303
GPPGP G P P + T + G+ L + G PG
Sbjct: 327 DGEKGQKGDTGPPGPPGLVIPRPGT---------GITIGEKGNIGLPGLPGEKGERGFPG 377
Query: 304 PRGPPGPPGPPGP--RGPPGPPGTPGSQGLAGERGTVGPS--GEPGVKGEEG 351
+GPPG PGPPG GPPGPPG PG +G G+ G G S G PG+ G+ G
Sbjct: 378 IQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPG 429
Score = 122 bits (305), Expect = 8e-28
Identities = 73/182 (40%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 197 GPAGPPGQTGPPGPAGPPGS---KGDRGQTGEKGPAGPPGLLGPPGP-----------RG 242
G G G G PGP G PG KG+RG G G G PG +GP GP +G
Sbjct: 576 GTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKG 635
Query: 243 LPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVP 302
+ G G PG PG PGP G+PG + P P D D G L G+P
Sbjct: 636 IQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIP 695
Query: 303 GPRGPP-----GPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATA 357
G +G P G PGPPGP+G PG PG PG+ G G G GP G PG G +GE
Sbjct: 696 GSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFAL 755
Query: 358 EG 359
G
Sbjct: 756 PG 757
Score = 121 bits (304), Expect = 1e-27
Identities = 80/182 (43%), Positives = 88/182 (48%), Gaps = 36/182 (19%)
Query: 196 TGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGP 255
TG +GPPGQ G PG GPPGS G GQ GEKG A G GP+GLPG G PG PG
Sbjct: 487 TGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQA------GATGPKGLPGIPGAPGAPGF 540
Query: 256 PGPAGNPG-----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP------ 304
PG G PG P +G L S P G L L G+PGP
Sbjct: 541 PGSKGEPGDILTFPGMKGDKGELGSPGAP-----GLPGLPGTPGQDGLPGLPGPKGEPGG 595
Query: 305 ------RGPPGPPGPP------GPRGPP--GPPGTPGSQGLAGERGTVGPSGEPGVKGEE 350
RGPPG PG P GP GPP GPPG G +G+ G G G G PG KG+
Sbjct: 596 ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDP 655
Query: 351 GE 352
G+
Sbjct: 656 GQ 657
Score = 119 bits (297), Expect = 7e-27
Identities = 80/209 (38%), Positives = 93/209 (44%), Gaps = 55/209 (26%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLL-------------- 235
P + G G PG G PG G PG G++GQ G+ GP GPPGL+
Sbjct: 300 PGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKG 359
Query: 236 --------GPPGPRGLPGEMGRPGPPGPPGPA--GNPGPSPNSP--QGALYSLQPPTDKD 283
G G RG PG G PG PGPPG A G PGP P P +G PP
Sbjct: 360 NIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGP-PGFPGERGQKGDEGPPGISI 418
Query: 284 NGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPR----------GPPGPPGTPGSQGLAG 333
G L G PG G PGPPGP GP GPPGPPG+PG +GL G
Sbjct: 419 PGPPG---------LDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQG 469
Query: 334 ERGTVGPSGEPGVKGEEGEKAATAEGEGV 362
E+ GVKG++G+ G G+
Sbjct: 470 EQ---------GVKGDKGDTCFNCIGTGI 489
Score = 117 bits (294), Expect = 2e-26
Identities = 82/191 (42%), Positives = 89/191 (46%), Gaps = 42/191 (21%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRG---------QTGEKGPAGPPGLLGPPGPR-----G 242
GP GPPG G PG +G PG KGD G TGEKG G PGL GPPGP G
Sbjct: 902 GPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLG 961
Query: 243 LPGEMGRPGPPGPPGPAGNPGPS--PNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
GE G PG PG PG +G G P P S QP G + L G
Sbjct: 962 SKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG------NPGLPG 1015
Query: 301 VPGPRGPPGP---------PGPPGPRGPPGP---PGTPGSQGLAGERG--------TVGP 340
PG GPPG PGP G GPPGP PG PGS GL G++G ++G
Sbjct: 1016 QPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGL 1075
Query: 341 SGEPGVKGEEG 351
G PG KGE G
Sbjct: 1076 PGLPGPKGEPG 1086
Score = 115 bits (288), Expect = 8e-26
Identities = 87/231 (37%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 157 PSSPDNDLPAPESTPPTWNE--DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPP 214
P P P P P + D IP +P + G G PG GPPGP G P
Sbjct: 1184 PGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP 1243
Query: 215 GS--KGDRGQTGEKGPAGPPGLLGPPGPRGLP---------GEMGRPGPP---------- 253
G +G +G G +GP G PG G PGP G P GE G PG P
Sbjct: 1244 GPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKG 1303
Query: 254 --GPPGPAGNPG-PSPNSPQG--ALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
GPPG GNPG P N +G L + P G S + + G PG GPP
Sbjct: 1304 DQGPPGLQGNPGRPGLNGMKGDPGLPGV-PGFPGMKGPSGVPGSAGP---EGEPGLIGPP 1359
Query: 309 GPPGPPGP-------RGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
GPPG PGP +G GPPG PG GL G G GP G PG G G+
Sbjct: 1360 GPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGD 1410
Score = 108 bits (269), Expect = 1e-23
Identities = 76/206 (36%), Positives = 90/206 (43%), Gaps = 47/206 (22%)
Query: 192 QRRPTGPAGPPG-------------QTGPPGPAGPPGSKGDRG------QTGEKGPAGPP 232
Q+ TGP GPPG + G G G PG KG+RG G GP G
Sbjct: 332 QKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPG-A 390
Query: 233 GLLGPPGPRGLPGEMGRPGP--------PGPPGPAGNPG-PSPNSPQGALYSLQPPTDK- 282
++GPPGP G PGE G+ G PGPPG G PG P P G PP+D+
Sbjct: 391 AVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEI 450
Query: 283 -DNGDSRLASAIVDTVLAGVPGPR----------------GPPGPPGPPGPRGPPGPPGT 325
+ G + D L G G + GPPG PG PG GPPG G
Sbjct: 451 CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGF 510
Query: 326 PGSQGLAGERGTVGPSGEPGVKGEEG 351
PG +G G+ G GP G PG+ G G
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPG 536
Score = 105 bits (261), Expect = 1e-22
Identities = 71/193 (36%), Positives = 81/193 (41%), Gaps = 43/193 (22%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLP----- 244
P Q G GPPG G PG KG++GQ G GP G PG+ G PG G P
Sbjct: 493 PGQPGLPGLPGPPGS------LGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Query: 245 --------------GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLA 290
GE+G PG PG PG G PG Q L L P + G
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAPGLPGLPGTPG------QDGLPGLPGPKGEPGG----- 595
Query: 291 SAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPP--GTPGSQGLAGERGTVGPSGEPGVKG 348
G GP G PG PG PG GP GPP G PG G G +G G G+PG+ G
Sbjct: 596 -----ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPG 650
Query: 349 EEGEKAATAEGEG 361
+G+ T G
Sbjct: 651 PKGDPGQTITQPG 663
Score = 103 bits (257), Expect = 3e-22
Identities = 71/174 (40%), Positives = 74/174 (42%), Gaps = 12/174 (6%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G GP G+ G PG G PG KG G G G G PG G PG G PG G PGP G
Sbjct: 1077 GLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136
Query: 257 GPAGNPG----PSPNSPQGALYSLQPPTDKDN-GDSRLASAIVDTVLAGVPGPRGPPGPP 311
GP GNPG P P G PP +K G + G PG G PGPP
Sbjct: 1137 GPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPG-FGNPGPP 1195
Query: 312 GPPGPRGP------PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
G PG G PG PG PG G GE G G G G G G EG
Sbjct: 1196 GLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEG 1249
Score = 73.6 bits (179), Expect = 3e-13
Identities = 49/124 (39%), Positives = 52/124 (41%), Gaps = 17/124 (13%)
Query: 164 LPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQT 223
LP P D P IP P + GP GP G GP GP G PG G G
Sbjct: 1364 LPGPSGQSIIIKGDAGPPGIP---GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD 1420
Query: 224 GEKGPAGPPGLLGPPGPRGL---PGEMGRPGPPGPPGPA-----------GNPGPSPNSP 269
G G G PGL G PG RGL PG G GPPGPPG + +P P
Sbjct: 1421 GAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCP 1480
Query: 270 QGAL 273
QG L
Sbjct: 1481 QGTL 1484
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 139 bits (349), Expect = 7e-33
Identities = 84/177 (47%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 189 VPRQRRPTGPAGPPG--QTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG---- 242
+P + PTGP+GPPG + G G G PG KGDRG GE GP GPPG GPPG RG
Sbjct: 204 LPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGI 263
Query: 243 -LPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
PG G PG PG PG G PG P P G +P G+ A G
Sbjct: 264 GKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKG 323
Query: 301 VPGPRGPPGPPG---PPGPRGPPGPPGTPGSQGL---AGERGTVGPSGEPGVKGEEG 351
GP G PG PG PPG GP GP G PGS GL GE G GP+G PG KGE G
Sbjct: 324 EQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERG 380
Score = 135 bits (341), Expect = 6e-32
Identities = 80/182 (43%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 180 PDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG 239
P IP +H +P + TGPAGP G G G G PGS G G G+ G GP G G PG
Sbjct: 348 PKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPG 407
Query: 240 PRGLPGEMGRPGPPGPPGPAGNPG-PSPN---SPQGALYSLQPPTDKDNGDSRLASAIVD 295
P+G PG G PG PGP GPAG G P N P+GA G I
Sbjct: 408 PKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGA-----------PGIPGTRGPIGP 456
Query: 296 TVLAGVPGPRGPPGPPGPPGP--------RGPPGPPGTPGSQGLAGERGTVGPSGEPGVK 347
+ G PG +G PG PGPPGP GP GPPG PG +G +GE G GP G PG
Sbjct: 457 PGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPP 516
Query: 348 GE 349
G+
Sbjct: 517 GQ 518
Score = 133 bits (335), Expect = 3e-31
Identities = 79/172 (45%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G GPPG GP GP G PGS G G GE GPAGP G G G RG PG G+PG PG P
Sbjct: 335 GLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKP 394
Query: 257 G---PAGNPG-------PSPNSPQGALYSLQPPTDKD----NGDSRLASAIVDTVLAGVP 302
G P GNPG P P G + P K NG++ A + G
Sbjct: 395 GLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGA---PGIPGTR 451
Query: 303 GPRGPPGPPGPPGPRGPPGPPGTPGSQGLA--GERGTVGPSGEPGVKGEEGE 352
GP GPPG PG PG +G PG PG PG G+A G G GP G PG +G GE
Sbjct: 452 GPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGE 503
Score = 127 bits (319), Expect = 2e-29
Identities = 80/193 (41%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 183 IPLAHPVPRQRRPTGPAGPPG-----------QTGPPGPAGPPGSKGDRGQTG---EKGP 228
IP +P GP GPPG + GP G G PG+KG++G G + G
Sbjct: 277 IPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGL 336
Query: 229 AGPPGLLGPPGPRGLPGEMGRPGPPG---PPGPAGNPGP-----SPNSPQGALYSLQPPT 280
GPPG +GP GP+G+PG G PGP G P GPAG PG SP S Y +P
Sbjct: 337 TGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGL 396
Query: 281 DKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGP 340
D G+ L D GV GP G PGP GP G +G PG G G +G G GT GP
Sbjct: 397 DGPKGNPGLPGPKGDP---GVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGP 453
Query: 341 SGEPGVKGEEGEK 353
G PG+ G G K
Sbjct: 454 IGPPGIPGFPGSK 466
Score = 125 bits (314), Expect = 8e-29
Identities = 74/186 (39%), Positives = 85/186 (45%), Gaps = 29/186 (15%)
Query: 188 PVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGL--PG 245
P P G G PG G PG GP G KGD G G GP GPPG G PGP G+ PG
Sbjct: 97 PGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPG 156
Query: 246 EMGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
+ G+ GP G PGP G PG P N +G + P +
Sbjct: 157 KPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGER-------------- 202
Query: 299 AGVPGPRGPPGPPGPP-----GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G+PGP+GP GP GPP G G PG PG G +G GE G +GP G G GE G +
Sbjct: 203 -GLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPE 261
Query: 354 AATAEG 359
G
Sbjct: 262 GIGKPG 267
Score = 122 bits (307), Expect = 5e-28
Identities = 88/233 (37%), Positives = 93/233 (39%), Gaps = 66/233 (28%)
Query: 157 PSSPDND-----LPAPESTPPTWNEDFLPDAIP--LAHPVPRQRRPTGPAGPPGQTGPPG 209
P P D LP P P P IP VP + GP G PG G PG
Sbjct: 122 PYGPKGDVGPAGLPGPRGPPG-------PPGIPGPAGISVPGKPGQQGPTGAPGPRGFPG 174
Query: 210 PAGPPGSKGDRGQTGE--------------KGPAGPPGLLGPP----------------- 238
G PG G GQ GE GP GP G GPP
Sbjct: 175 EKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIK 234
Query: 239 GPRGLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVL 298
G RG PGEMG GPPGP GP G GP GA + P
Sbjct: 235 GDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQP------------------- 275
Query: 299 AGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
G+PG +G PG PG GP GPPG G PG GL GERG G G PG KGE+G
Sbjct: 276 -GIPGTKGLPGAPGIAGPPGPPG-FGKPGLPGLKGERGPAGLPGGPGAKGEQG 326
Score = 122 bits (306), Expect = 6e-28
Identities = 73/176 (41%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 197 GPAGPP--GQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMG--RPGP 252
GP GP G+ G PG G PG +G G G+ GPAG PG GPPGP G+PG G PG
Sbjct: 98 GPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGK 157
Query: 253 PGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
PG GP G PGP + + P + G+ + G PG RG PGP G
Sbjct: 158 PGQQGPTGAPGPRGFPGEKGAPGV-PGMNGQKGEMGYGA-------PGRPGERGLPGPQG 209
Query: 313 PPGPRGPP--------GPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGE 360
P GP GPP G PG PG +G G G +GP G PG +G GE+ G+
Sbjct: 210 PTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGK 265
Score = 114 bits (284), Expect = 2e-25
Identities = 75/177 (42%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 191 RQRRPTGPAGPPGQTGP----PGPAGPPGS--KGDRGQTGEKGPAGPPGLLGPPGPRGLP 244
R + PTG GP T P G +G++G G GPAGP G GP GP G P
Sbjct: 24 RYQMPTGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKP 83
Query: 245 GEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGP 304
G G PG G PG G PGPS G P G+ D AG+PGP
Sbjct: 84 G-YGSPGLQGEPGLPGPPGPSAVGKPGV-----PGLPGKPGERGPYGPKGDVGPAGLPGP 137
Query: 305 RGPPGPPGPPGPRG--PPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEG 359
RGPPGPPG PGP G PG PG G G G RG G G PGV G G+K G
Sbjct: 138 RGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYG 194
Score = 82.4 bits (202), Expect = 7e-16
Identities = 60/166 (36%), Positives = 70/166 (42%), Gaps = 19/166 (11%)
Query: 164 LPAPESTPPTWNEDFLPDAIPLAHP--VPRQRRPTGPAGPPGQTGPPGPAGPPG------ 215
LP P+ P LP + A +P GP G PG G GP GPPG
Sbjct: 405 LPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPG 464
Query: 216 SKGDRGQTGEKGPAG--------PPGLLGPPGPRGLPGEMGRPGPP---GPPGPAGNPGP 264
SKGD G G GPAG P G GPPGPRG GE G PGPP GPPG A P
Sbjct: 465 SKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEG 524
Query: 265 SPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGP 310
+ Q S P + G + + + +L+ G P P
Sbjct: 525 FIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIP 570
>gi|11386161 alpha 2 type IX collagen [Homo sapiens]
Length = 689
Score = 138 bits (348), Expect = 9e-33
Identities = 84/187 (44%), Positives = 94/187 (50%), Gaps = 40/187 (21%)
Query: 190 PRQRRPTGPAGPP---------GQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGP 240
P +R P GP GPP G GPPG AGPPG KG+ G+ G GP G PG+ G G
Sbjct: 29 PGERGPPGPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGA 88
Query: 241 RGLPGEMGRP---GPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTV 297
+G PG MG P G PG PGP G PGP P G PP G L I
Sbjct: 89 KGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPG------PP-----GPVGLPGEI---- 133
Query: 298 LAGVPGPRGPPGPPGPPGPRGPPGPPGTPGS-QGLAGER----------GTVGPSGEPGV 346
G+ GP+G PGP GP GP GPPG PG PG+ QGL G G GP G GV
Sbjct: 134 --GIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKGPPGLQGV 191
Query: 347 KGEEGEK 353
KG G++
Sbjct: 192 KGHAGKR 198
Score = 134 bits (338), Expect = 1e-31
Identities = 84/214 (39%), Positives = 98/214 (45%), Gaps = 45/214 (21%)
Query: 184 PLAHPVPRQRR-PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
P+ P P+ R+ P G GPPG GP G G G KG G+TG +G G PG+ G PG +G
Sbjct: 395 PVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKG 454
Query: 243 LPGEMGRPGP------------PGPPGPAGNPG----PSPNSPQGALYSL----QPPTDK 282
GE G PGP PGP G AG PG P P P+G + QP
Sbjct: 455 EKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQG 514
Query: 283 DNGDSRLASAIVDTVL---------------------AGVPGPRGPPGPPGPPGPRGP-- 319
G IVD L G+ GP GPPGPPG PG +GP
Sbjct: 515 VEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHG 574
Query: 320 -PGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
PGP G PG G G+ G GP G+ G KG+ GE
Sbjct: 575 HPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGE 608
Score = 129 bits (324), Expect = 5e-30
Identities = 78/185 (42%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 190 PRQRRPTGPAGPPGQTGPPG------PAGPPGSKGDRGQTGEKGPAGPPGLLG---PPGP 240
P R P G GP G TGPPG G PG KG GQ G+ G G GL G PG
Sbjct: 285 PGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGT 344
Query: 241 RGLPGEMGRPGP------PGPPGPAGNPGPSPN-SPQGALYSLQPPTDKDNGDSRLASAI 293
+G PG+ G PGP GPPG G PGP PQG + GD +
Sbjct: 345 KGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIM--------GQKGDQGERGPV 396
Query: 294 VDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEK 353
G GP+G GPPG PGP+G PG G GS G G RG VG G G+ GE+GEK
Sbjct: 397 GQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEK 456
Query: 354 AATAE 358
+ E
Sbjct: 457 GESGE 461
Score = 126 bits (316), Expect = 4e-29
Identities = 73/163 (44%), Positives = 82/163 (50%), Gaps = 19/163 (11%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGP---AGPPGLLGPPGPRGLPGEMGRPGPP 253
G GPPG+ GP GP G G KGD G G +GP GP G GPPG G G G PG
Sbjct: 259 GATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMK 318
Query: 254 GPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGP 313
G G AG PG SP A QP T GD G PGP+G PG GP
Sbjct: 319 GSAGQAGQPG-SPGHQGLAGVPGQPGTKGGPGDQ------------GEPGPQGLPGFSGP 365
Query: 314 PGPRGPPGPPGTPGSQGLAGERGTV---GPSGEPGVKGEEGEK 353
PG G PGP G G QG+ G++G GP G+PG +G +G K
Sbjct: 366 PGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPK 408
Score = 120 bits (301), Expect = 2e-27
Identities = 75/196 (38%), Positives = 92/196 (46%), Gaps = 37/196 (18%)
Query: 179 LPDAIPLAHPV--PRQRRPTGPAGPPGQTG--------------------PPGPAGPPGS 216
LP I + P P P+GP GPPG+ G PPG GPPG
Sbjct: 129 LPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKGPPGL 188
Query: 217 KGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPG-PSPNSPQGALYS 275
+G +G G++G G PG G PGP+G G G G PGPPGP G G P P+G
Sbjct: 189 QGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKG---- 244
Query: 276 LQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGER 335
+G + AI T G PG GP GPPG G +G G PG G QG+ G +
Sbjct: 245 ----ETGPHGYKGMVGAIGAT---GPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPK 297
Query: 336 GTVGPSGEPGVKGEEG 351
G GP PG+ G++G
Sbjct: 298 GATGP---PGINGKDG 310
Score = 120 bits (301), Expect = 2e-27
Identities = 73/180 (40%), Positives = 89/180 (49%), Gaps = 27/180 (15%)
Query: 190 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGD---RGQTGEKGPAGPPGLLGPPGPRGLPGE 246
P + GP G PG +GPPG G PG +G+ +G G+KG G G +G PGP+G G
Sbjct: 348 PGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGP 407
Query: 247 MGRPGPPGPPGPAGNPG-------PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
G GPPG PGP G PG P P+G + D G + L + +
Sbjct: 408 KGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKV--------GDPGVAGLPGEKGEKGES 459
Query: 300 GVPGP------RGPPGPPGPPGPRGPPGP---PGTPGSQGLAGERGTVGPSGEPGVKGEE 350
G PGP RG PG PGP G G PG PG PG +GLAG RG G G GV+G +
Sbjct: 460 GEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRD 519
Score = 119 bits (297), Expect = 7e-27
Identities = 69/170 (40%), Positives = 79/170 (46%), Gaps = 35/170 (20%)
Query: 200 GPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPA 259
GPPG+ GPPGP GPP G G G G GPPG GPPGP+G PG+ G GP G PG
Sbjct: 27 GPPGERGPPGPPGPP---GVPGSDGIDGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGID 83
Query: 260 GNPG----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGP-- 313
G G P P G + G PG GPPG PGP
Sbjct: 84 GLTGAKGEPGPMGIPG--------------------------VKGQPGLPGPPGLPGPGF 117
Query: 314 PGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAEGEGVQ 363
GP GPPGP G PG G+ G +G GP G G G G+ +G++
Sbjct: 118 AGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLE 167
Score = 119 bits (297), Expect = 7e-27
Identities = 68/167 (40%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
G AGP G+TGP G G G+ G G GE+GP GPPG G G G PG G G GP
Sbjct: 238 GMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPK 297
Query: 257 GPAGNPG-----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPP 311
G G PG +P +P + Q G LA + G PG +G PG
Sbjct: 298 GATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAG------VPGQPGTKGGPGDQ 351
Query: 312 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGEKAATAE 358
G PGP+G PG G PG +G G RG +GP G G KG++GE+ +
Sbjct: 352 GEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQ 398
Score = 113 bits (282), Expect = 4e-25
Identities = 65/159 (40%), Positives = 75/159 (47%), Gaps = 30/159 (18%)
Query: 197 GPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAG---PPGLLGPPGPRGLPGEMGRPGPP 253
G G PG G PGP G PG G G+ GE GP G P G++G G +G G +G+PGP
Sbjct: 343 GTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQ 402
Query: 254 GPPGPAGNPG-PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPG 312
G GP G G P PQG L GV G +G PG G
Sbjct: 403 GRQGPKGEQGPPGIPGPQG--------------------------LPGVKGDKGSPGKTG 436
Query: 313 PPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
P G G PG G PG +G GE G GP G+ GV+GE G
Sbjct: 437 PRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPG 475
Score = 87.8 bits (216), Expect = 2e-17
Identities = 54/138 (39%), Positives = 58/138 (42%), Gaps = 37/138 (26%)
Query: 195 PTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGR----- 249
P GP GPPG G GP G PG +G G G G G G G G +G PGE+GR
Sbjct: 557 PPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPGM 616
Query: 250 PGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPG 309
PGPPG PG G PG + N G G RG PG
Sbjct: 617 PGPPGIPGLPGRPGQAIN--------------------------------GKDGDRGSPG 644
Query: 310 PPGPPGPRGPPGPPGTPG 327
PG G G PGP G PG
Sbjct: 645 APGEAGRPGLPGPVGLPG 662
Score = 68.6 bits (166), Expect = 1e-11
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 298 LAGVPGPRGPPGPPGPP---------GPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
+ G PG RGPPGPPGPP G GPPG G PG +G G+ G GP G+PG+ G
Sbjct: 25 IRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDG 84
Query: 349 EEGEK 353
G K
Sbjct: 85 LTGAK 89
Score = 67.8 bits (164), Expect = 2e-11
Identities = 43/93 (46%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 184 PLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGD-----RGQTGEKGPAGPPGLLGPP 238
P HP PR G G GQ G GP G G KGD RG G GP G PGL G P
Sbjct: 572 PHGHPGPRG--VPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRP 629
Query: 239 --------GPRGLPGEMGRPGPPGPPGPAGNPG 263
G RG PG G G PG PGP G PG
Sbjct: 630 GQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPG 662
Score = 66.2 bits (160), Expect = 5e-11
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 293 IVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEGE 352
++ V+ + RGPPG GPP GPPGPPG PGS G+ G+ G G +G PG KGE G+
Sbjct: 14 LLQVVVLALAQIRGPPGERGPP---GPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGEPGK 70
Score = 65.5 bits (158), Expect = 9e-11
Identities = 30/59 (50%), Positives = 34/59 (57%)
Query: 293 IVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKGEEG 351
+V LA + GP G GPPGPPGP G PG G G G G+ G GP GEPG G +G
Sbjct: 17 VVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGEPGKAGPDG 75
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.137 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,876,784
Number of Sequences: 37866
Number of extensions: 2531386
Number of successful extensions: 97448
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 1867
Number of HSP's that attempted gapping in prelim test: 13710
Number of HSP's gapped (non-prelim): 18800
length of query: 439
length of database: 18,247,518
effective HSP length: 105
effective length of query: 334
effective length of database: 14,271,588
effective search space: 4766710392
effective search space used: 4766710392
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.