LOC100287587 18324

Name: LOC100287587	Sequence: fasta or formatted (488aa)		NCBI GI: 239745228
Description: PREDICTED: hypothetical protein XP_002343392		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 35 2 C cysteine 1.0 5 1 D aspartate 3.9 19 2 E glutamate 4.9 24 2 F phenylalanine 2.7 13 2 G glycine 12.9 63 3 H histidine 2.9 14 1 I isoleucine 1.2 6 1 K lysine 2.9 14 1 L leucine 12.7 62 3 M methionine 1.2 6 1 N asparagine 1.4 7 1 P proline 12.1 59 4 Q glutamine 3.9 19 1 R arginine 7.6 37 2 S serine 8.2 40 3 T threonine 6.6 32 3 V valine 4.9 24 2 W tryptophan 1.2 6 1 Y tyrosine 0.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343392 LOC100289782 0.747 PREDICTED: hypothetical protein XP_002347588 LOC100292848 0.684 PREDICTED: hypothetical protein COL11A2 0.040 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.040 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.040 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL1A2 0.038 alpha 2 type I collagen COL11A1 0.037 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.037 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.037 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A1 0.036 alpha 1 type V collagen preproprotein COLQ 0.035 acetylcholinesterase collagen-like tail subunit iso... COL1A1 0.035 alpha 1 type I collagen preproprotein COL17A1 0.034 alpha 1 type XVII collagen COL22A1 0.034 collagen, type XXII, alpha 1 COL3A1 0.033 collagen type III alpha 1 preproprotein COL5A2 0.032 alpha 2 type V collagen preproprotein COL9A1 0.032 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.032 alpha 1 type IX collagen isoform 2 precursor COL2A1 0.031 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.031 collagen, type II, alpha 1 isoform 2 precursor [Hom... NACA 0.031 nascent polypeptide-associated complex alpha subuni... COL27A1 0.031 collagen, type XXVII, alpha 1 COL5A3 0.031 collagen, type V, alpha 3 preproprotein COL7A1 0.031 alpha 1 type VII collagen precursor COL9A2 0.030 alpha 2 type IX collagen COL24A1 0.030 collagen, type XXIV, alpha 1 COL19A1 0.029 alpha 1 type XIX collagen precursor COL28A1 0.029 collagen, type XXVIII precursor SYN1 0.029 synapsin I isoform Ia Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.