LOC100289782 20573

Name: LOC100289782	Sequence: fasta or formatted (800aa)		NCBI GI: 239750867
Description: PREDICTED: hypothetical protein XP_002347588		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 49 2 C cysteine 2.1 17 2 D aspartate 3.5 28 2 E glutamate 5.4 43 3 F phenylalanine 2.1 17 2 G glycine 12.2 98 3 H histidine 2.0 16 1 I isoleucine 1.8 14 1 K lysine 3.0 24 2 L leucine 10.6 85 3 M methionine 1.8 14 1 N asparagine 1.4 11 1 P proline 12.8 102 3 Q glutamine 4.1 33 2 R arginine 7.9 63 2 S serine 10.8 86 3 T threonine 5.6 45 1 V valine 4.8 38 2 W tryptophan 1.2 10 1 Y tyrosine 0.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347588 LOC100292848 0.314 PREDICTED: hypothetical protein LOC100287587 0.261 PREDICTED: hypothetical protein XP_002343392 COL7A1 0.029 alpha 1 type VII collagen precursor COL1A1 0.028 alpha 1 type I collagen preproprotein COL2A1 0.028 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.028 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.027 alpha 1 type V collagen preproprotein COL3A1 0.027 collagen type III alpha 1 preproprotein COL11A2 0.027 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.027 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.027 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A1 0.026 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.026 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.026 alpha 1 type XI collagen isoform A preproprotein [Ho... COL8A2 0.025 collagen, type VIII, alpha 2 COL9A1 0.025 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.025 alpha 1 type IX collagen isoform 2 precursor COL18A1 0.024 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.024 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.024 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL1A2 0.023 alpha 2 type I collagen COL5A2 0.023 alpha 2 type V collagen preproprotein COL4A5 0.023 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.023 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.023 type IV collagen alpha 5 isoform 3 precursor COL10A1 0.023 type X collagen alpha 1 precursor COL8A1 0.023 alpha 1 type VIII collagen precursor COL8A1 0.023 alpha 1 type VIII collagen precursor COL5A3 0.023 collagen, type V, alpha 3 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.