SYN1 11759

Name: SYN1	Sequence: fasta or formatted (705aa)		NCBI GI: 19924099
Description: synapsin I isoform Ia		Referenced in: Rab Synapses
Other entries for this name: alt prot [669aa] synapsin I isoform Ib
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 72 5 C cysteine 0.4 3 1 D aspartate 4.0 28 1 E glutamate 2.8 20 2 F phenylalanine 2.7 19 2 G glycine 10.6 75 4 H histidine 2.4 17 1 I isoleucine 2.7 19 2 K lysine 4.4 31 2 L leucine 6.0 42 2 M methionine 2.0 14 1 N asparagine 2.8 20 1 P proline 13.9 98 6 Q glutamine 8.4 59 2 R arginine 5.5 39 3 S serine 8.5 60 2 T threonine 4.5 32 2 V valine 5.7 40 3 W tryptophan 0.6 4 1 Y tyrosine 1.8 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synapsin I isoform Ia SYN1 0.940 synapsin I isoform Ib SYN2 0.437 synapsin II isoform IIa SYN2 0.415 synapsin II isoform IIb SYN3 0.408 synapsin III isoform IIIg SYN3 0.405 synapsin III isoform IIIa SYN3 0.365 synapsin III isoform IIIc PRB3 0.077 proline-rich protein BstNI subfamily 3 precursor [H... PRB1 0.076 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.074 proline-rich protein BstNI subfamily 2 PRB4 0.063 proline-rich protein BstNI subfamily 4 precursor [Ho... NACA 0.053 nascent polypeptide-associated complex alpha subuni... PCLO 0.052 piccolo isoform 2 PCLO 0.052 piccolo isoform 1 SFPQ 0.050 splicing factor proline/glutamine rich (polypyrimidin... SRRM1 0.050 serine/arginine repetitive matrix 1 WDR33 0.050 WD repeat domain 33 isoform 1 CPSF6 0.045 cleavage and polyadenylation specific factor 6, 68 ... PRB1 0.045 proline-rich protein BstNI subfamily 1 isoform 2 pre... COL2A1 0.045 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.045 collagen, type II, alpha 1 isoform 2 precursor [Hom... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent re... COL3A1 0.044 collagen type III alpha 1 preproprotein RAPH1 0.044 Ras association and pleckstrin homology domains 1 is... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.