Guide to the Human Genome
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Name: TNFRSF19 Sequence: fasta or formatted (423aa) NCBI GI: 23238202
Description:

tumor necrosis factor receptor superfamily, member 19 isoform 1 precursor

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [417aa] tumor necrosis factor receptor superfamily, member 19 isoform 2 p...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         32           2
 C cysteine            7.6         32           2
 D aspartate           5.2         22           1
 E glutamate           5.7         24           2
 F phenylalanine       3.8         16           2
 G glycine             6.6         28           2
 H histidine           1.9          8           1
 I isoleucine          2.4         10           1
 K lysine              3.5         15           2
 L leucine             9.9         42           2
 M methionine          2.1          9           1
 N asparagine          3.5         15           2
 P proline             5.9         25           4
 Q glutamine           5.9         25           2
 R arginine            4.7         20           2
 S serine              9.9         42           2
 T threonine           5.2         22           1
 V valine              5.7         24           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor receptor superfamily, member 1... 
TNFRSF19              0.984   tumor necrosis factor receptor superfamily, member 1...
EDA2R                 0.191   X-linked ectodysplasin receptor 
EDAR                  0.050   ectodysplasin A receptor precursor 
RELT                  0.031   RELT tumor necrosis factor receptor precursor 
RELT                  0.031   RELT tumor necrosis factor receptor precursor 
TNFRSF25              0.030   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.023   tumor necrosis factor receptor superfamily, member 2...
LTBR                  0.023   lymphotoxin beta receptor 
TNFRSF25              0.023   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.023   tumor necrosis factor receptor superfamily, member 25...
TNFRSF25              0.022   tumor necrosis factor receptor superfamily, member 2...
LAMC2                 0.021   laminin, gamma 2 isoform b precursor 
LAMC2                 0.021   laminin, gamma 2 isoform a precursor 
CD40                  0.019   CD40 antigen isoform 1 precursor 
TNFRSF1A              0.016   tumor necrosis factor receptor 1 precursor 
TNFRSF14              0.015   tumor necrosis factor receptor superfamily, member 1...
TNFRSF11A             0.015   tumor necrosis factor receptor superfamily, member 11...
SCUBE1                0.015   signal peptide, CUB domain, EGF-like 1 
LAMA1                 0.014   laminin, alpha 1 precursor 
LAMB4                 0.013   laminin, beta 4 
KRTAP10-3             0.013   keratin associated protein 10-3 
KRTAP10-1             0.013   keratin associated protein 10-1 
TNFRSF11B             0.012   osteoprotegerin precursor 
NGFR                  0.012   nerve growth factor receptor precursor 
LAMB1                 0.012   laminin, beta 1 precursor 
CD40                  0.012   CD40 antigen isoform 2 precursor 
TNFRSF21              0.012   tumor necrosis factor receptor superfamily, member 21...
KRTAP10-7             0.012   keratin associated protein 10-7 
LAMA4                 0.010   laminin, alpha 4 isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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