SCUBE1 2434

Name: SCUBE1	Sequence: fasta or formatted (988aa)		NCBI GI: 120587029
Description: signal peptide, CUB domain, EGF-like 1		Referenced in: Extracellular Matrix
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 50 3 C cysteine 9.1 90 1 D aspartate 5.9 58 2 E glutamate 5.8 57 2 F phenylalanine 3.3 33 2 G glycine 10.3 102 3 H histidine 3.6 36 2 I isoleucine 3.6 36 1 K lysine 5.6 55 2 L leucine 5.7 56 2 M methionine 1.1 11 1 N asparagine 4.0 40 2 P proline 5.4 53 3 Q glutamine 4.9 48 2 R arginine 5.1 50 3 S serine 6.8 67 2 T threonine 6.6 65 3 V valine 4.6 45 2 W tryptophan 0.4 4 1 Y tyrosine 3.2 32 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 signal peptide, CUB domain, EGF-like 1 SCUBE3 0.668 signal peptide, CUB domain, EGF-like 3 SCUBE2 0.643 CEGP1 protein MATN2 0.118 matrilin 2 isoform b precursor MATN2 0.118 matrilin 2 isoform a precursor FBN2 0.108 fibrillin 2 precursor MEGF6 0.105 EGF-like-domain, multiple 3 FBN3 0.096 fibrillin 3 precursor LTBP1 0.091 latent transforming growth factor beta binding prote... LTBP1 0.091 latent transforming growth factor beta binding prote... FBN1 0.090 fibrillin 1 precursor FBLN2 0.084 fibulin 2 isoform a precursor LTBP2 0.084 latent transforming growth factor beta binding protei... FBLN2 0.083 fibulin 2 isoform b precursor FBLN1 0.080 fibulin 1 isoform B precursor FBLN1 0.080 fibulin 1 isoform A precursor FBLN1 0.080 fibulin 1 isoform D FBLN1 0.080 fibulin 1 isoform C precursor LTBP4 0.077 latent transforming growth factor beta binding prot... LTBP4 0.077 latent transforming growth factor beta binding prot... LTBP4 0.077 latent transforming growth factor beta binding prot... LTBP3 0.074 latent transforming growth factor beta binding prot... LTBP3 0.074 latent transforming growth factor beta binding prote... HMCN1 0.072 hemicentin 1 FBLN5 0.062 fibulin 5 precursor HMCN2 0.058 PREDICTED: hemicentin 2 HMCN2 0.058 PREDICTED: hemicentin 2 HMCN2 0.058 PREDICTED: hemicentin 2 EFEMP2 0.056 EGF-containing fibulin-like extracellular matrix pr... NOTCH3 0.056 Notch homolog 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.