Guide to the Human Genome
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Name: KRTAP10-7 Sequence: fasta or formatted (370aa) NCBI GI: 38490571
Description:

keratin associated protein 10-7

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         21           2
 C cysteine           26.5         98           2
 D aspartate           2.2          8           2
 E glutamate           1.1          4           1
 F phenylalanine       0.0          0           0
 G glycine             2.7         10           1
 H histidine           0.0          0           0
 I isoleucine          0.8          3           1
 K lysine              1.9          7           1
 L leucine             2.4          9           2
 M methionine          0.5          2           1
 N asparagine          0.0          0           0
 P proline            11.4         42           2
 Q glutamine           7.8         29           2
 R arginine            2.2          8           1
 S serine             20.5         76           3
 T threonine           4.6         17           2
 V valine              8.6         32           1
 W tryptophan          0.3          1           1
 Y tyrosine            0.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-7 
KRTAP10-6             0.864   keratin associated protein 10-6 
KRTAP10-4             0.851   keratin associated protein 10-4 
KRTAP10-12            0.450   keratin associated protein 10-12 
KRTAP10-11            0.444   keratin associated protein 10-11 
KRTAP10-1             0.438   keratin associated protein 10-1 
KRTAP10-9             0.417   keratin associated protein 10-9 
KRTAP10-8             0.415   keratin associated protein 10-8 
KRTAP10-5             0.412   keratin associated protein 10-5 
KRTAP10-3             0.405   keratin associated protein 10-3 
KRTAP10-10            0.400   keratin associated protein 10-10 
KRTAP10-2             0.391   keratin associated protein 10-2 
LOC100130599          0.300   PREDICTED: hypothetical protein 
LOC100130599          0.296   PREDICTED: similar to Keratin-associated protein 10...
LOC100131696          0.279   PREDICTED: keratin associated protein 
LOC100131696          0.276   PREDICTED: keratin associated protein 
LOC100288060          0.276   PREDICTED: hypothetical protein XP_002343557 
KRTAP4-8              0.232   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.232   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.218   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.218   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-3              0.218   keratin associated protein 4-3 
KRTAP4-9              0.216   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.215   keratin associated protein 4-9 
KRTAP4-12             0.215   keratin associated protein 4-12 
KRTAP4-11             0.208   keratin associated protein 4-11 
KRTAP4-9              0.207   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.202   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.202   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.198   PREDICTED: keratin associated protein 4-8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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