LAMA1 27180

Name: LAMA1	Sequence: fasta or formatted (3075aa)		NCBI GI: 38788416
Description: laminin, alpha 1 precursor		Referenced in: Netrins and Laminins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 195 4 C cysteine 5.4 166 2 D aspartate 5.6 171 2 E glutamate 6.0 186 3 F phenylalanine 2.8 86 2 G glycine 8.3 255 3 H histidine 3.0 91 2 I isoleucine 4.0 123 2 K lysine 4.6 142 2 L leucine 9.4 289 3 M methionine 1.3 40 1 N asparagine 5.0 155 2 P proline 4.7 146 2 Q glutamine 4.3 132 2 R arginine 5.2 159 2 S serine 7.9 244 3 T threonine 5.6 171 2 V valine 6.6 202 2 W tryptophan 0.8 24 2 Y tyrosine 3.2 98 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 laminin, alpha 1 precursor LAMA2 0.446 laminin alpha 2 subunit isoform b precursor LAMA2 0.445 laminin alpha 2 subunit isoform a precursor LAMA3 0.095 laminin alpha 3 subunit isoform 1 LAMC1 0.094 laminin, gamma 1 precursor LAMA3 0.092 laminin alpha 3 subunit isoform 3 LAMC3 0.090 laminin, gamma 3 precursor LAMA5 0.077 laminin alpha 5 LAMA3 0.060 laminin alpha 3 subunit isoform 2 LAMA4 0.058 laminin, alpha 4 isoform 2 precursor LAMA4 0.058 laminin, alpha 4 isoform 2 precursor LAMA4 0.058 laminin, alpha 4 isoform 1 precursor LAMA3 0.057 laminin alpha 3 subunit isoform 4 LAMC2 0.052 laminin, gamma 2 isoform b precursor LAMC2 0.052 laminin, gamma 2 isoform a precursor HSPG2 0.052 heparan sulfate proteoglycan 2 LAMB1 0.049 laminin, beta 1 precursor LAMB4 0.042 laminin, beta 4 LAMB2 0.041 laminin, beta 2 precursor USH2A 0.038 usherin isoform B USH2A 0.038 usherin isoform A NTN1 0.035 netrin 1 LAMB3 0.030 laminin, beta 3 precursor LAMB3 0.030 laminin, beta 3 precursor LAMB3 0.030 laminin, beta 3 precursor NTN4 0.028 netrin 4 NTN3 0.026 netrin 3 NTNG1 0.023 netrin G1 isoform 1 MEGF6 0.022 EGF-like-domain, multiple 3 MEGF11 0.022 multiple EGF-like-domains 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.