Guide to the Human Genome
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Name: KRTAP10-3 Sequence: fasta or formatted (221aa) NCBI GI: 63053515
Description:

keratin associated protein 10-3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         16           2
 C cysteine           25.8         57           2
 D aspartate           0.9          2           1
 E glutamate           1.4          3           1
 F phenylalanine       0.0          0           0
 G glycine             1.8          4           1
 H histidine           0.0          0           0
 I isoleucine          0.9          2           1
 K lysine              1.8          4           1
 L leucine             3.6          8           2
 M methionine          0.9          2           1
 N asparagine          0.0          0           0
 P proline            12.2         27           2
 Q glutamine           5.9         13           2
 R arginine            3.2          7           1
 S serine             19.9         44           3
 T threonine           5.9         13           2
 V valine              7.7         17           1
 W tryptophan          0.5          1           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-3 
KRTAP10-1             0.784   keratin associated protein 10-1 
KRTAP10-9             0.779   keratin associated protein 10-9 
KRTAP10-11            0.767   keratin associated protein 10-11 
KRTAP10-2             0.722   keratin associated protein 10-2 
KRTAP10-10            0.722   keratin associated protein 10-10 
KRTAP10-5             0.715   keratin associated protein 10-5 
KRTAP10-12            0.703   keratin associated protein 10-12 
KRTAP10-7             0.695   keratin associated protein 10-7 
LOC100130599          0.689   PREDICTED: hypothetical protein 
LOC100130599          0.680   PREDICTED: similar to Keratin-associated protein 10...
KRTAP10-8             0.680   keratin associated protein 10-8 
KRTAP10-6             0.656   keratin associated protein 10-6 
KRTAP10-4             0.586   keratin associated protein 10-4 
KRTAP4-8              0.344   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.344   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.340   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.336   keratin associated protein 4-9 
KRTAP4-3              0.336   keratin associated protein 4-3 
KRTAP4-12             0.332   keratin associated protein 4-12 
KRTAP4-11             0.328   keratin associated protein 4-11 
KRTAP4-8              0.320   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.320   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.315   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.313   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.313   PREDICTED: similar to keratin associated protein 4-...
LOC100131696          0.307   PREDICTED: keratin associated protein 
LOC100288060          0.307   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.307   PREDICTED: keratin associated protein 
KRTAP4-8              0.301   PREDICTED: keratin associated protein 4-8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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