Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRTAP10-1 Sequence: fasta or formatted (282aa) NCBI GI: 63053512
Description:

keratin associated protein 10-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         23           2
 C cysteine           26.6         75           2
 D aspartate           1.4          4           1
 E glutamate           1.4          4           1
 F phenylalanine       0.0          0           0
 G glycine             0.7          2           1
 H histidine           0.7          2           1
 I isoleucine          0.4          1           1
 K lysine              1.8          5           1
 L leucine             2.8          8           2
 M methionine          1.1          3           1
 N asparagine          0.0          0           0
 P proline            11.7         33           1
 Q glutamine           7.4         21           2
 R arginine            2.8          8           1
 S serine             20.2         57           4
 T threonine           4.6         13           2
 V valine              7.4         21           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-1 
KRTAP10-5             0.852   keratin associated protein 10-5 
KRTAP10-9             0.849   keratin associated protein 10-9 
KRTAP10-11            0.820   keratin associated protein 10-11 
KRTAP10-7             0.766   keratin associated protein 10-7 
KRTAP10-2             0.730   keratin associated protein 10-2 
KRTAP10-6             0.723   keratin associated protein 10-6 
KRTAP10-4             0.676   keratin associated protein 10-4 
KRTAP10-10            0.553   keratin associated protein 10-10 
KRTAP10-12            0.536   keratin associated protein 10-12 
KRTAP10-8             0.523   keratin associated protein 10-8 
KRTAP10-3             0.474   keratin associated protein 10-3 
LOC100130599          0.413   PREDICTED: hypothetical protein 
LOC100130599          0.407   PREDICTED: similar to Keratin-associated protein 10...
LOC100131696          0.324   PREDICTED: keratin associated protein 
LOC100288060          0.324   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.323   PREDICTED: keratin associated protein 
KRTAP4-9              0.302   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.300   keratin associated protein 4-9 
KRTAP4-8              0.296   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.296   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.289   keratin associated protein 4-12 
KRTAP4-3              0.285   keratin associated protein 4-3 
KRTAP4-9              0.272   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.270   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.270   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.267   keratin associated protein 4-11 
KRTAP4-8              0.266   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.250   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.250   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press