LAMB1 7026

Name: LAMB1	Sequence: fasta or formatted (1786aa)		NCBI GI: 167614504
Description: laminin, beta 1 precursor		Referenced in: Netrins and Laminins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 119 3 C cysteine 7.1 127 1 D aspartate 6.6 118 3 E glutamate 8.6 153 2 F phenylalanine 3.1 55 2 G glycine 7.1 126 2 H histidine 2.2 39 1 I isoleucine 3.9 70 2 K lysine 4.8 85 2 L leucine 7.7 137 2 M methionine 1.8 32 2 N asparagine 4.5 80 2 P proline 4.9 87 2 Q glutamine 5.0 90 2 R arginine 4.9 88 2 S serine 6.7 120 2 T threonine 5.2 93 2 V valine 5.5 98 2 W tryptophan 0.7 13 2 Y tyrosine 3.1 56 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 laminin, beta 1 precursor LAMB2 0.514 laminin, beta 2 precursor LAMB4 0.383 laminin, beta 4 LAMB3 0.107 laminin, beta 3 precursor LAMB3 0.107 laminin, beta 3 precursor LAMB3 0.107 laminin, beta 3 precursor NTN4 0.091 netrin 4 LAMC1 0.084 laminin, gamma 1 precursor LAMC3 0.075 laminin, gamma 3 precursor LAMA2 0.075 laminin alpha 2 subunit isoform b precursor LAMA2 0.075 laminin alpha 2 subunit isoform a precursor LAMA1 0.071 laminin, alpha 1 precursor LAMA5 0.069 laminin alpha 5 USH2A 0.067 usherin isoform B USH2A 0.067 usherin isoform A LAMA3 0.065 laminin alpha 3 subunit isoform 1 LAMA3 0.065 laminin alpha 3 subunit isoform 3 NTN1 0.061 netrin 1 MEGF9 0.047 multiple EGF-like-domains 9 NTN3 0.046 netrin 3 MEGF11 0.039 multiple EGF-like-domains 11 LAMA4 0.039 laminin, alpha 4 isoform 2 precursor LAMA4 0.039 laminin, alpha 4 isoform 2 precursor LAMA4 0.039 laminin, alpha 4 isoform 1 precursor LAMC2 0.038 laminin, gamma 2 isoform b precursor LAMC2 0.038 laminin, gamma 2 isoform a precursor MEGF6 0.037 EGF-like-domain, multiple 3 MEGF10 0.036 multiple EGF-like-domains 10 NTNG1 0.036 netrin G1 isoform 1 HSPG2 0.034 heparan sulfate proteoglycan 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.