YME1L1 12845

Name: YME1L1	Sequence: fasta or formatted (773aa)		NCBI GI: 21327685
Description: YME1-like 1 isoform 1		Referenced in: Metalloproteases
Other entries for this name: alt prot [716aa] YME1-like 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 50 2 C cysteine 0.6 5 1 D aspartate 4.8 37 1 E glutamate 7.0 54 2 F phenylalanine 5.0 39 2 G glycine 6.6 51 2 H histidine 2.6 20 2 I isoleucine 6.1 47 3 K lysine 7.4 57 2 L leucine 10.1 78 3 M methionine 2.7 21 1 N asparagine 4.1 32 1 P proline 4.7 36 2 Q glutamine 3.8 29 1 R arginine 5.4 42 2 S serine 7.8 60 2 T threonine 6.2 48 3 V valine 6.1 47 2 W tryptophan 0.6 5 1 Y tyrosine 1.9 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 YME1-like 1 isoform 1 YME1L1 0.878 YME1-like 1 isoform 3 AFG3L2 0.219 AFG3 ATPase family gene 3-like 2 SPG7 0.191 spastic paraplegia 7 isoform 1 PSMC5 0.105 proteasome 26S ATPase subunit 5 VCP 0.102 valosin-containing protein PSMC2 0.099 proteasome 26S ATPase subunit 2 PSMC6 0.095 proteasome 26S ATPase subunit 6 PSMC1 0.090 proteasome 26S ATPase subunit 1 PSMC3 0.090 proteasome 26S ATPase subunit 3 SPATA5L1 0.088 spermatogenesis associated 5-like 1 SPG7 0.087 spastic paraplegia 7 isoform 2 SPATA5 0.087 spermatogenesis associated 5 NVL 0.086 nuclear VCP-like isoform 2 NVL 0.086 nuclear VCP-like isoform 1 LOC652826 0.085 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.085 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.085 proteasome 26S ATPase subunit 4 isoform 1 PEX6 0.081 peroxisomal biogenesis factor 6 KATNA1 0.080 katanin p60 subunit A 1 KATNAL1 0.080 katanin p60 subunit A-like 1 KATNAL1 0.080 katanin p60 subunit A-like 1 PEX1 0.078 peroxin1 VPS4B 0.071 vacuolar protein sorting factor 4B VPS4A 0.069 vacuolar protein sorting factor 4A ATAD2 0.068 ATPase family, AAA domain containing 2 SPAST 0.067 spastin isoform 2 SPAST 0.067 spastin isoform 1 FIGNL1 0.067 fidgetin-like 1 FIGNL1 0.067 fidgetin-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.