TRIP13 1061

Name: TRIP13	Sequence: fasta or formatted (432aa)		NCBI GI: 11321607
Description: thyroid hormone receptor interactor 13		Referenced in: Nucleus and Nucleolus Thyroid and Thyroid Hormone Receptor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 31 3 C cysteine 1.4 6 1 D aspartate 5.8 25 2 E glutamate 6.9 30 3 F phenylalanine 3.7 16 1 G glycine 3.7 16 1 H histidine 2.5 11 1 I isoleucine 7.4 32 2 K lysine 6.2 27 2 L leucine 12.5 54 3 M methionine 1.2 5 1 N asparagine 4.6 20 2 P proline 3.2 14 2 Q glutamine 4.2 18 2 R arginine 4.4 19 1 S serine 7.9 34 2 T threonine 5.6 24 2 V valine 8.1 35 2 W tryptophan 1.2 5 1 Y tyrosine 2.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thyroid hormone receptor interactor 13 VCP 0.057 valosin-containing protein VPS4B 0.055 vacuolar protein sorting factor 4B VPS4A 0.054 vacuolar protein sorting factor 4A KATNAL2 0.050 katanin p60 subunit A-like 2 NVL 0.049 nuclear VCP-like isoform 2 NVL 0.049 nuclear VCP-like isoform 1 NSF 0.046 vesicle-fusing ATPase LOC728806 0.045 PREDICTED: similar to N-ethylmaleimide-sensitive fa... SPATA5 0.045 spermatogenesis associated 5 KATNA1 0.045 katanin p60 subunit A 1 PEX1 0.044 peroxin1 KATNAL1 0.043 katanin p60 subunit A-like 1 KATNAL1 0.043 katanin p60 subunit A-like 1 ATAD1 0.043 ATPase family, AAA domain containing 1 PSMC1 0.041 proteasome 26S ATPase subunit 1 SPATA5L1 0.040 spermatogenesis associated 5-like 1 FIGNL1 0.039 fidgetin-like 1 FIGNL1 0.039 fidgetin-like 1 PSMC5 0.039 proteasome 26S ATPase subunit 5 AFG3L2 0.039 AFG3 ATPase family gene 3-like 2 LOC652826 0.038 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.038 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.038 proteasome 26S ATPase subunit 4 isoform 1 PSMC6 0.037 proteasome 26S ATPase subunit 6 PSMC2 0.035 proteasome 26S ATPase subunit 2 PEX6 0.035 peroxisomal biogenesis factor 6 SPAST 0.034 spastin isoform 2 SPAST 0.034 spastin isoform 1 ATAD2 0.027 ATPase family, AAA domain containing 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.